No. words: 1086; after pruning: 1060


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    3    0.0 9.7 (1,1:492)  488  0.00 0.00 0.00  USDA032F_F03_BE443835Ta22P057A01P037B091F1_021.ab1        1   490 (42)  C USDA032R_F03_BE443835Ta22P057A01P037B091R1_021.ab1   (61)   493     4 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 3       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  246 nodes

 125 str. conn. components

Path
    1  C USDA032R_F03_BE443835Ta22P057A01P037B091R1_021.ab1   554 
  202    USDA032F_F03_BE443835Ta22P057A01P037B091F1_021.ab1   141 
Contig length: old 593, new 593

Contig length: old 593, new 593
New start: 0