No. words: 1416; after pruning: 1390


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 14.4 (1,1:721)  643  0.00 0.00 0.00  USDA026F_H06_BE444305Sn24P043C03P032B011F1_034.ab1        1   650 (0)  C USDA026R_H06_BE444305Sn24P043C03P032B011R1_034.ab1   (44)   722    73 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  326 nodes

 165 str. conn. components

Path
    1  C USDA026R_H06_BE444305Sn24P043C03P032B011R1_034.ab1   766 
   57    USDA026F_H06_BE444305Sn24P043C03P032B011F1_034.ab1    13 
   77  C USDA026R_H06_BE444305Sn24P043C03P032B011R1_034.ab1   690 
   81    USDA026F_H06_BE444305Sn24P043C03P032B011F1_034.ab1    37 
   85  C USDA026R_H06_BE444305Sn24P043C03P032B011R1_034.ab1   682 
   89    USDA026F_H06_BE444305Sn24P043C03P032B011F1_034.ab1    45 
  133  C USDA026R_H06_BE444305Sn24P043C03P032B011R1_034.ab1   634 
  141    USDA026F_H06_BE444305Sn24P043C03P032B011F1_034.ab1    97 
  197  C USDA026R_H06_BE444305Sn24P043C03P032B011R1_034.ab1   570 
  201    USDA026F_H06_BE444305Sn24P043C03P032B011F1_034.ab1   157 
  225  C USDA026R_H06_BE444305Sn24P043C03P032B011R1_034.ab1   542 
  229    USDA026F_H06_BE444305Sn24P043C03P032B011F1_034.ab1   185 
  237  C USDA026R_H06_BE444305Sn24P043C03P032B011R1_034.ab1   530 
  277    USDA026F_H06_BE444305Sn24P043C03P032B011F1_034.ab1   233 
  281  C USDA026R_H06_BE444305Sn24P043C03P032B011R1_034.ab1   486 
  329    USDA026F_H06_BE444305Sn24P043C03P032B011F1_034.ab1   285 
  337  C USDA026R_H06_BE444305Sn24P043C03P032B011R1_034.ab1   430 
  345    USDA026F_H06_BE444305Sn24P043C03P032B011F1_034.ab1   301 
  357  C USDA026R_H06_BE444305Sn24P043C03P032B011R1_034.ab1   410 
  369    USDA026F_H06_BE444305Sn24P043C03P032B011F1_034.ab1   325 
  409  C USDA026R_H06_BE444305Sn24P043C03P032B011R1_034.ab1   358 
  425    USDA026F_H06_BE444305Sn24P043C03P032B011F1_034.ab1   381 
  453  C USDA026R_H06_BE444305Sn24P043C03P032B011R1_034.ab1   314 
  485    USDA026F_H06_BE444305Sn24P043C03P032B011F1_034.ab1   441 
  489  C USDA026R_H06_BE444305Sn24P043C03P032B011R1_034.ab1   278 
  497    USDA026F_H06_BE444305Sn24P043C03P032B011F1_034.ab1   453 
  509  C USDA026R_H06_BE444305Sn24P043C03P032B011R1_034.ab1   258 
  553    USDA026F_H06_BE444305Sn24P043C03P032B011F1_034.ab1   509 
  569  C USDA026R_H06_BE444305Sn24P043C03P032B011R1_034.ab1   198 
  577    USDA026F_H06_BE444305Sn24P043C03P032B011F1_034.ab1   533 
  589  C USDA026R_H06_BE444305Sn24P043C03P032B011R1_034.ab1   178 
  601    USDA026F_H06_BE444305Sn24P043C03P032B011F1_034.ab1   557 
  605  C USDA026R_H06_BE444305Sn24P043C03P032B011R1_034.ab1   162 
  625    USDA026F_H06_BE444305Sn24P043C03P032B011F1_034.ab1   581 
  629  C USDA026R_H06_BE444305Sn24P043C03P032B011R1_034.ab1   138 
  649    USDA026F_H06_BE444305Sn24P043C03P032B011F1_034.ab1   605 
  669  C USDA026R_H06_BE444305Sn24P043C03P032B011R1_034.ab1    98 
  677    USDA026F_H06_BE444305Sn24P043C03P032B011F1_034.ab1   633 
  685  C USDA026R_H06_BE444305Sn24P043C03P032B011R1_034.ab1    82 
Contig length: old 766, new 766

Contig length: old 766, new 766
New start: 0