No. words: 1290; after pruning: 1264


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 11.8 (1,1:603)  590  0.17 0.00 0.17  USDA026F_D08_BE444305Ta12P043D03P032B011F1_058.ab1        1   604 (37)  C USDA026R_D08_BE444305Ta12P043D03P032B011R1_058.ab1   (46)   603     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  298 nodes

 151 str. conn. components

Path
    1  C USDA026R_D08_BE444305Ta12P043D03P032B011R1_058.ab1   649 
  162    USDA026F_D08_BE444305Ta12P043D03P032B011F1_058.ab1   116 
  170  C USDA026R_D08_BE444305Ta12P043D03P032B011R1_058.ab1   480 
  258    USDA026F_D08_BE444305Ta12P043D03P032B011F1_058.ab1   212 
  314  C USDA026R_D08_BE444305Ta12P043D03P032B011R1_058.ab1   336 
  330    USDA026F_D08_BE444305Ta12P043D03P032B011F1_058.ab1   284 
  338  C USDA026R_D08_BE444305Ta12P043D03P032B011R1_058.ab1   312 
  370    USDA026F_D08_BE444305Ta12P043D03P032B011F1_058.ab1   324 
  378  C USDA026R_D08_BE444305Ta12P043D03P032B011R1_058.ab1   272 
  442    USDA026F_D08_BE444305Ta12P043D03P032B011F1_058.ab1   396 
  474  C USDA026R_D08_BE444305Ta12P043D03P032B011R1_058.ab1   176 
  490    USDA026F_D08_BE444305Ta12P043D03P032B011F1_058.ab1   444 
  494  C USDA026R_D08_BE444305Ta12P043D03P032B011R1_058.ab1   156 
  530    USDA026F_D08_BE444305Ta12P043D03P032B011F1_058.ab1   484 
  578  C USDA026R_D08_BE444305Ta12P043D03P032B011R1_058.ab1    72 
  582    USDA026F_D08_BE444305Ta12P043D03P032B011F1_058.ab1   536 
Contig length: old 686, new 687

Contig length: old 687, new 687
New start: 0