No. words: 1494; after pruning: 1468


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 13.7 (1,1:715)  693  0.14 0.00 0.42  USDA026F_F05_BE444305Ta14P043C03P032B011F1_037.ab1        1   718 (17)  C USDA026R_F05_BE444305Ta14P043C03P032B011R1_037.ab1   (44)   715     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  350 nodes

 177 str. conn. components

Path
    1  C USDA026R_F05_BE444305Ta14P043C03P032B011R1_037.ab1   759 
   59    USDA026F_F05_BE444305Ta14P043C03P032B011F1_037.ab1    15 
   79  C USDA026R_F05_BE444305Ta14P043C03P032B011R1_037.ab1   681 
   83    USDA026F_F05_BE444305Ta14P043C03P032B011F1_037.ab1    39 
   87  C USDA026R_F05_BE444305Ta14P043C03P032B011R1_037.ab1   673 
   91    USDA026F_F05_BE444305Ta14P043C03P032B011F1_037.ab1    47 
  111  C USDA026R_F05_BE444305Ta14P043C03P032B011R1_037.ab1   649 
  115    USDA026F_F05_BE444305Ta14P043C03P032B011F1_037.ab1    71 
  127  C USDA026R_F05_BE444305Ta14P043C03P032B011R1_037.ab1   633 
  131    USDA026F_F05_BE444305Ta14P043C03P032B011F1_037.ab1    87 
  135  C USDA026R_F05_BE444305Ta14P043C03P032B011R1_037.ab1   625 
  147    USDA026F_F05_BE444305Ta14P043C03P032B011F1_037.ab1   103 
  151  C USDA026R_F05_BE444305Ta14P043C03P032B011R1_037.ab1   609 
  187    USDA026F_F05_BE444305Ta14P043C03P032B011F1_037.ab1   143 
  207  C USDA026R_F05_BE444305Ta14P043C03P032B011R1_037.ab1   553 
  215    USDA026F_F05_BE444305Ta14P043C03P032B011F1_037.ab1   171 
  223  C USDA026R_F05_BE444305Ta14P043C03P032B011R1_037.ab1   537 
  267    USDA026F_F05_BE444305Ta14P043C03P032B011F1_037.ab1   223 
  283  C USDA026R_F05_BE444305Ta14P043C03P032B011R1_037.ab1   477 
  347    USDA026F_F05_BE444305Ta14P043C03P032B011F1_037.ab1   303 
  355  C USDA026R_F05_BE444305Ta14P043C03P032B011R1_037.ab1   405 
  371    USDA026F_F05_BE444305Ta14P043C03P032B011F1_037.ab1   327 
  379  C USDA026R_F05_BE444305Ta14P043C03P032B011R1_037.ab1   381 
  395    USDA026F_F05_BE444305Ta14P043C03P032B011F1_037.ab1   351 
  403  C USDA026R_F05_BE444305Ta14P043C03P032B011R1_037.ab1   357 
  535    USDA026F_F05_BE444305Ta14P043C03P032B011F1_037.ab1   491 
  539  C USDA026R_F05_BE444305Ta14P043C03P032B011R1_037.ab1   221 
  603    USDA026F_F05_BE444305Ta14P043C03P032B011F1_037.ab1   559 
  607  C USDA026R_F05_BE444305Ta14P043C03P032B011R1_037.ab1   153 
  734    USDA026F_F05_BE444305Ta14P043C03P032B011F1_037.ab1   690 
  744  C USDA026R_F05_BE444305Ta14P043C03P032B011R1_037.ab1    18 
  757    USDA026F_F05_BE444305Ta14P043C03P032B011F1_037.ab1   714 
Contig length: old 778, new 778

Contig length: old 778, new 778
New start: 0