No. words: 1307; after pruning: 1281


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    2    0.0 11.4 (1,1:610)  597  0.00 0.00 0.16  USDA026F_F08_BE444305Ta14P043D03P032B011F1_054.ab1        1   609 (31)  C USDA026R_F08_BE444305Ta14P043D03P032B011R1_054.ab1   (57)   610     3 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 2       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  302 nodes

 153 str. conn. components

Path
    1  C USDA026R_F08_BE444305Ta14P043D03P032B011R1_054.ab1   667 
   89    USDA026F_F08_BE444305Ta14P043D03P032B011F1_054.ab1    32 
   93  C USDA026R_F08_BE444305Ta14P043D03P032B011R1_054.ab1   575 
  165    USDA026F_F08_BE444305Ta14P043D03P032B011F1_054.ab1   108 
  181  C USDA026R_F08_BE444305Ta14P043D03P032B011R1_054.ab1   487 
  213    USDA026F_F08_BE444305Ta14P043D03P032B011F1_054.ab1   156 
  533  C USDA026R_F08_BE444305Ta14P043D03P032B011R1_054.ab1   135 
  541    USDA026F_F08_BE444305Ta14P043D03P032B011F1_054.ab1   484 
  589  C USDA026R_F08_BE444305Ta14P043D03P032B011R1_054.ab1    79 
  597    USDA026F_F08_BE444305Ta14P043D03P032B011F1_054.ab1   540 
Contig length: old 696, new 697

Contig length: old 697, new 697
New start: 0