No. words: 1256; after pruning: 1230


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 9.3 (1,1:595)  575  0.17 0.00 0.50  USDA026F_G08_BE444305Ta15P043D03P032B011F1_052.ab1        1   598 (45)  C USDA026R_G08_BE444305Ta15P043D03P032B011R1_052.ab1   (18)   595     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  288 nodes

 146 str. conn. components

Path
    1  C USDA026R_G08_BE444305Ta15P043D03P032B011R1_052.ab1   613 
   30    USDA026F_G08_BE444305Ta15P043D03P032B011F1_052.ab1    12 
   38  C USDA026R_G08_BE444305Ta15P043D03P032B011R1_052.ab1   576 
   88    USDA026F_G08_BE444305Ta15P043D03P032B011F1_052.ab1    70 
   92  C USDA026R_G08_BE444305Ta15P043D03P032B011R1_052.ab1   522 
  104    USDA026F_G08_BE444305Ta15P043D03P032B011F1_052.ab1    86 
  108  C USDA026R_G08_BE444305Ta15P043D03P032B011R1_052.ab1   506 
  136    USDA026F_G08_BE444305Ta15P043D03P032B011F1_052.ab1   118 
  144  C USDA026R_G08_BE444305Ta15P043D03P032B011R1_052.ab1   470 
  172    USDA026F_G08_BE444305Ta15P043D03P032B011F1_052.ab1   154 
  216  C USDA026R_G08_BE444305Ta15P043D03P032B011R1_052.ab1   398 
  232    USDA026F_G08_BE444305Ta15P043D03P032B011F1_052.ab1   214 
  244  C USDA026R_G08_BE444305Ta15P043D03P032B011R1_052.ab1   370 
  256    USDA026F_G08_BE444305Ta15P043D03P032B011F1_052.ab1   238 
  296  C USDA026R_G08_BE444305Ta15P043D03P032B011R1_052.ab1   318 
  308    USDA026F_G08_BE444305Ta15P043D03P032B011F1_052.ab1   290 
  352  C USDA026R_G08_BE444305Ta15P043D03P032B011R1_052.ab1   262 
  360    USDA026F_G08_BE444305Ta15P043D03P032B011F1_052.ab1   342 
  372  C USDA026R_G08_BE444305Ta15P043D03P032B011R1_052.ab1   242 
  416    USDA026F_G08_BE444305Ta15P043D03P032B011F1_052.ab1   398 
  432  C USDA026R_G08_BE444305Ta15P043D03P032B011R1_052.ab1   182 
  448    USDA026F_G08_BE444305Ta15P043D03P032B011F1_052.ab1   430 
  468  C USDA026R_G08_BE444305Ta15P043D03P032B011R1_052.ab1   146 
  500    USDA026F_G08_BE444305Ta15P043D03P032B011F1_052.ab1   482 
  512  C USDA026R_G08_BE444305Ta15P043D03P032B011R1_052.ab1   102 
  520    USDA026F_G08_BE444305Ta15P043D03P032B011F1_052.ab1   502 
  548  C USDA026R_G08_BE444305Ta15P043D03P032B011R1_052.ab1    66 
  552    USDA026F_G08_BE444305Ta15P043D03P032B011F1_052.ab1   534 
  572  C USDA026R_G08_BE444305Ta15P043D03P032B011R1_052.ab1    42 
  576    USDA026F_G08_BE444305Ta15P043D03P032B011F1_052.ab1   558 
Contig length: old 660, new 661

Contig length: old 661, new 661
New start: 0