No. words: 1293; after pruning: 1267


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    2    0.0 12.1 (1,1:610)  598  0.00 0.00 0.16  USDA026F_C09_BE444305Ta19P043D03P032B011F1_075.ab1        1   609 (33)  C USDA026R_C09_BE444305Ta19P043D03P032B011R1_075.ab1   (41)   610     3 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 2       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  302 nodes

 153 str. conn. components

Path
    1  C USDA026R_C09_BE444305Ta19P043D03P032B011R1_075.ab1   651 
   57    USDA026F_C09_BE444305Ta19P043D03P032B011F1_075.ab1    16 
   65  C USDA026R_C09_BE444305Ta19P043D03P032B011R1_075.ab1   587 
   73    USDA026F_C09_BE444305Ta19P043D03P032B011F1_075.ab1    32 
   77  C USDA026R_C09_BE444305Ta19P043D03P032B011R1_075.ab1   575 
   81    USDA026F_C09_BE444305Ta19P043D03P032B011F1_075.ab1    40 
   93  C USDA026R_C09_BE444305Ta19P043D03P032B011R1_075.ab1   559 
  193    USDA026F_C09_BE444305Ta19P043D03P032B011F1_075.ab1   152 
  241  C USDA026R_C09_BE444305Ta19P043D03P032B011R1_075.ab1   411 
  333    USDA026F_C09_BE444305Ta19P043D03P032B011F1_075.ab1   292 
  405  C USDA026R_C09_BE444305Ta19P043D03P032B011R1_075.ab1   247 
  437    USDA026F_C09_BE444305Ta19P043D03P032B011F1_075.ab1   396 
  453  C USDA026R_C09_BE444305Ta19P043D03P032B011R1_075.ab1   199 
  525    USDA026F_C09_BE444305Ta19P043D03P032B011F1_075.ab1   484 
  577  C USDA026R_C09_BE444305Ta19P043D03P032B011R1_075.ab1    75 
  581    USDA026F_C09_BE444305Ta19P043D03P032B011F1_075.ab1   540 
Contig length: old 682, new 683

Contig length: old 683, new 683
New start: 0