No. words: 1306; after pruning: 1280


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 13.0 (1,1:619)  605  0.00 0.16 0.16  USDA026F_G09_BE444305Ta23P043D03P032B011F1_067.ab1        1   620 (34)  C USDA026R_G09_BE444305Ta23P043D03P032B011R1_067.ab1   (32)   620     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  306 nodes

 155 str. conn. components

Path
    1  C USDA026R_G09_BE444305Ta23P043D03P032B011R1_067.ab1   652 
  151    USDA026F_G09_BE444305Ta23P043D03P032B011F1_067.ab1   118 
  155  C USDA026R_G09_BE444305Ta23P043D03P032B011R1_067.ab1   498 
  163    USDA026F_G09_BE444305Ta23P043D03P032B011F1_067.ab1   130 
  167  C USDA026R_G09_BE444305Ta23P043D03P032B011R1_067.ab1   486 
  195    USDA026F_G09_BE444305Ta23P043D03P032B011F1_067.ab1   162 
  291  C USDA026R_G09_BE444305Ta23P043D03P032B011R1_067.ab1   362 
  331    USDA026F_G09_BE444305Ta23P043D03P032B011F1_067.ab1   298 
  347  C USDA026R_G09_BE444305Ta23P043D03P032B011R1_067.ab1   306 
  375    USDA026F_G09_BE444305Ta23P043D03P032B011F1_067.ab1   342 
  423  C USDA026R_G09_BE444305Ta23P043D03P032B011R1_067.ab1   230 
  443    USDA026F_G09_BE444305Ta23P043D03P032B011F1_067.ab1   410 
  491  C USDA026R_G09_BE444305Ta23P043D03P032B011R1_067.ab1   162 
  507    USDA026F_G09_BE444305Ta23P043D03P032B011F1_067.ab1   474 
  511  C USDA026R_G09_BE444305Ta23P043D03P032B011R1_067.ab1   142 
  527    USDA026F_G09_BE444305Ta23P043D03P032B011F1_067.ab1   494 
  543  C USDA026R_G09_BE444305Ta23P043D03P032B011R1_067.ab1   110 
  547    USDA026F_G09_BE444305Ta23P043D03P032B011F1_067.ab1   514 
  575  C USDA026R_G09_BE444305Ta23P043D03P032B011R1_067.ab1    78 
  583    USDA026F_G09_BE444305Ta23P043D03P032B011F1_067.ab1   550 
Contig length: old 686, new 687

Contig length: old 687, new 687
New start: 0