No. words: 471; after pruning: 445


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 1.1 (1,1:265)  129  1.90 0.00 1.90  USDA021F_A11_BE495786Ta19P043F01P032F011F1_095.ab1      112   269 (47)  C USDA021R_A11_BE495786Ta19P043F01P032F011R1_095.ab1   (0)   155     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  66 nodes

 35 str. conn. components

Path
    1    USDA021F_A11_BE495786Ta19P043F01P032F011F1_095.ab1     1 
Contig length: old 316, new 316

Contig length: old 316, new 316
New start: 0