No. words: 872; after pruning: 846


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 7.3 (1,1:492)  315  0.00 0.00 0.00  USDA021F_G09_BE497177Ta23P043D06P004F051F1_067.ab1      163   493 (48)  C USDA021R_G09_BE497177Ta23P043D06P004F051R1_067.ab1   (0)   331     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  168 nodes

 86 str. conn. components

Path
    1    USDA021F_G09_BE497177Ta23P043D06P004F051F1_067.ab1     1 
Contig length: old 541, new 541

Contig length: old 541, new 541
New start: 0