No. words: 1227; after pruning: 1201


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 12.5 (1,1:578)  551  0.00 0.35 0.17  USDA027F_F05_BE500714Ta14P035D06P004B101F1_037.ab1        1   579 (43)  C USDA027R_F05_BE500714Ta14P035D06P004B101R1_037.ab1   (25)   580     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  284 nodes

 144 str. conn. components

Path
    1  C USDA027R_F05_BE500714Ta14P035D06P004B101R1_037.ab1   605 
   78    USDA027F_F05_BE500714Ta14P035D06P004B101F1_037.ab1    51 
   82  C USDA027R_F05_BE500714Ta14P035D06P004B101R1_037.ab1   524 
   86    USDA027F_F05_BE500714Ta14P035D06P004B101F1_037.ab1    59 
  102  C USDA027R_F05_BE500714Ta14P035D06P004B101R1_037.ab1   504 
  118    USDA027F_F05_BE500714Ta14P035D06P004B101F1_037.ab1    91 
  126  C USDA027R_F05_BE500714Ta14P035D06P004B101R1_037.ab1   480 
  130    USDA027F_F05_BE500714Ta14P035D06P004B101F1_037.ab1   103 
  134  C USDA027R_F05_BE500714Ta14P035D06P004B101R1_037.ab1   472 
  146    USDA027F_F05_BE500714Ta14P035D06P004B101F1_037.ab1   119 
  162  C USDA027R_F05_BE500714Ta14P035D06P004B101R1_037.ab1   444 
  174    USDA027F_F05_BE500714Ta14P035D06P004B101F1_037.ab1   147 
  178  C USDA027R_F05_BE500714Ta14P035D06P004B101R1_037.ab1   428 
  186    USDA027F_F05_BE500714Ta14P035D06P004B101F1_037.ab1   159 
  258  C USDA027R_F05_BE500714Ta14P035D06P004B101R1_037.ab1   348 
  262    USDA027F_F05_BE500714Ta14P035D06P004B101F1_037.ab1   235 
  290  C USDA027R_F05_BE500714Ta14P035D06P004B101R1_037.ab1   316 
  326    USDA027F_F05_BE500714Ta14P035D06P004B101F1_037.ab1   299 
  354  C USDA027R_F05_BE500714Ta14P035D06P004B101R1_037.ab1   252 
  370    USDA027F_F05_BE500714Ta14P035D06P004B101F1_037.ab1   343 
  378  C USDA027R_F05_BE500714Ta14P035D06P004B101R1_037.ab1   228 
  386    USDA027F_F05_BE500714Ta14P035D06P004B101F1_037.ab1   359 
  390  C USDA027R_F05_BE500714Ta14P035D06P004B101R1_037.ab1   216 
  414    USDA027F_F05_BE500714Ta14P035D06P004B101F1_037.ab1   387 
  422  C USDA027R_F05_BE500714Ta14P035D06P004B101R1_037.ab1   184 
  426    USDA027F_F05_BE500714Ta14P035D06P004B101F1_037.ab1   399 
  430  C USDA027R_F05_BE500714Ta14P035D06P004B101R1_037.ab1   176 
  438    USDA027F_F05_BE500714Ta14P035D06P004B101F1_037.ab1   411 
  442  C USDA027R_F05_BE500714Ta14P035D06P004B101R1_037.ab1   164 
  450    USDA027F_F05_BE500714Ta14P035D06P004B101F1_037.ab1   423 
  454  C USDA027R_F05_BE500714Ta14P035D06P004B101R1_037.ab1   152 
  494    USDA027F_F05_BE500714Ta14P035D06P004B101F1_037.ab1   467 
  498  C USDA027R_F05_BE500714Ta14P035D06P004B101R1_037.ab1   108 
  510    USDA027F_F05_BE500714Ta14P035D06P004B101F1_037.ab1   483 
  518  C USDA027R_F05_BE500714Ta14P035D06P004B101R1_037.ab1    88 
  526    USDA027F_F05_BE500714Ta14P035D06P004B101F1_037.ab1   499 
  534  C USDA027R_F05_BE500714Ta14P035D06P004B101R1_037.ab1    72 
  542    USDA027F_F05_BE500714Ta14P035D06P004B101F1_037.ab1   515 
  546  C USDA027R_F05_BE500714Ta14P035D06P004B101R1_037.ab1    60 
  566    USDA027F_F05_BE500714Ta14P035D06P004B101F1_037.ab1   539 
  574  C USDA027R_F05_BE500714Ta14P035D06P004B101R1_037.ab1    32 
  578    USDA027F_F05_BE500714Ta14P035D06P004B101F1_037.ab1   551 
Contig length: old 648, new 649

Contig length: old 649, new 649
New start: 0