No. words: 1226; after pruning: 1200


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 12.8 (1,1:577)  562  0.00 0.00 0.00  USDA027F_B06_BE500714Ta18P035D06P004B101F1_046.ab1        1   578 (46)  C USDA027R_B06_BE500714Ta18P035D06P004B101R1_046.ab1   (24)   578     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  290 nodes

 147 str. conn. components

Path
    1  C USDA027R_B06_BE500714Ta18P035D06P004B101R1_046.ab1   602 
   52    USDA027F_B06_BE500714Ta18P035D06P004B101F1_046.ab1    28 
   60  C USDA027R_B06_BE500714Ta18P035D06P004B101R1_046.ab1   543 
   84    USDA027F_B06_BE500714Ta18P035D06P004B101F1_046.ab1    60 
   88  C USDA027R_B06_BE500714Ta18P035D06P004B101R1_046.ab1   515 
   92    USDA027F_B06_BE500714Ta18P035D06P004B101F1_046.ab1    68 
  100  C USDA027R_B06_BE500714Ta18P035D06P004B101R1_046.ab1   503 
  104    USDA027F_B06_BE500714Ta18P035D06P004B101F1_046.ab1    80 
  116  C USDA027R_B06_BE500714Ta18P035D06P004B101R1_046.ab1   487 
  128    USDA027F_B06_BE500714Ta18P035D06P004B101F1_046.ab1   104 
  132  C USDA027R_B06_BE500714Ta18P035D06P004B101R1_046.ab1   471 
  152    USDA027F_B06_BE500714Ta18P035D06P004B101F1_046.ab1   128 
  180  C USDA027R_B06_BE500714Ta18P035D06P004B101R1_046.ab1   423 
  196    USDA027F_B06_BE500714Ta18P035D06P004B101F1_046.ab1   172 
  200  C USDA027R_B06_BE500714Ta18P035D06P004B101R1_046.ab1   403 
  208    USDA027F_B06_BE500714Ta18P035D06P004B101F1_046.ab1   184 
  212  C USDA027R_B06_BE500714Ta18P035D06P004B101R1_046.ab1   391 
  220    USDA027F_B06_BE500714Ta18P035D06P004B101F1_046.ab1   196 
  260  C USDA027R_B06_BE500714Ta18P035D06P004B101R1_046.ab1   343 
  304    USDA027F_B06_BE500714Ta18P035D06P004B101F1_046.ab1   280 
  308  C USDA027R_B06_BE500714Ta18P035D06P004B101R1_046.ab1   295 
  348    USDA027F_B06_BE500714Ta18P035D06P004B101F1_046.ab1   324 
  360  C USDA027R_B06_BE500714Ta18P035D06P004B101R1_046.ab1   243 
  396    USDA027F_B06_BE500714Ta18P035D06P004B101F1_046.ab1   372 
  408  C USDA027R_B06_BE500714Ta18P035D06P004B101R1_046.ab1   195 
  416    USDA027F_B06_BE500714Ta18P035D06P004B101F1_046.ab1   392 
  420  C USDA027R_B06_BE500714Ta18P035D06P004B101R1_046.ab1   183 
  432    USDA027F_B06_BE500714Ta18P035D06P004B101F1_046.ab1   408 
  444  C USDA027R_B06_BE500714Ta18P035D06P004B101R1_046.ab1   159 
  472    USDA027F_B06_BE500714Ta18P035D06P004B101F1_046.ab1   448 
  476  C USDA027R_B06_BE500714Ta18P035D06P004B101R1_046.ab1   127 
  484    USDA027F_B06_BE500714Ta18P035D06P004B101F1_046.ab1   460 
  488  C USDA027R_B06_BE500714Ta18P035D06P004B101R1_046.ab1   115 
  508    USDA027F_B06_BE500714Ta18P035D06P004B101F1_046.ab1   484 
  516  C USDA027R_B06_BE500714Ta18P035D06P004B101R1_046.ab1    87 
  528    USDA027F_B06_BE500714Ta18P035D06P004B101F1_046.ab1   504 
  532  C USDA027R_B06_BE500714Ta18P035D06P004B101R1_046.ab1    71 
  564    USDA027F_B06_BE500714Ta18P035D06P004B101F1_046.ab1   540 
  572  C USDA027R_B06_BE500714Ta18P035D06P004B101R1_046.ab1    31 
  580    USDA027F_B06_BE500714Ta18P035D06P004B101F1_046.ab1   556 
Contig length: old 648, new 648

Contig length: old 648, new 648
New start: 0