No. words: 1457; after pruning: 1431


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 14.5 (1,1:760)  650  0.72 0.14 0.00  USDA029F_D08_BE518358Ta12P043E12P017H101F1_058.ab1        1   691 (0)  C USDA029R_D08_BE518358Ta12P043E12P017H101R1_058.ab1   (4)   762    71 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  334 nodes

 169 str. conn. components

Path
    1  C USDA029R_D08_BE518358Ta12P043E12P017H101R1_058.ab1   766 
    8    USDA029F_D08_BE518358Ta12P043E12P017H101F1_058.ab1     4 
   16  C USDA029R_D08_BE518358Ta12P043E12P017H101R1_058.ab1   751 
   20    USDA029F_D08_BE518358Ta12P043E12P017H101F1_058.ab1    16 
   24  C USDA029R_D08_BE518358Ta12P043E12P017H101R1_058.ab1   743 
   33    USDA029F_D08_BE518358Ta12P043E12P017H101F1_058.ab1    28 
   71  C USDA029R_D08_BE518358Ta12P043E12P017H101R1_058.ab1   696 
   75    USDA029F_D08_BE518358Ta12P043E12P017H101F1_058.ab1    70 
  143  C USDA029R_D08_BE518358Ta12P043E12P017H101R1_058.ab1   624 
  147    USDA029F_D08_BE518358Ta12P043E12P017H101F1_058.ab1   142 
  187  C USDA029R_D08_BE518358Ta12P043E12P017H101R1_058.ab1   580 
  195    USDA029F_D08_BE518358Ta12P043E12P017H101F1_058.ab1   190 
  211  C USDA029R_D08_BE518358Ta12P043E12P017H101R1_058.ab1   556 
  215    USDA029F_D08_BE518358Ta12P043E12P017H101F1_058.ab1   210 
  219  C USDA029R_D08_BE518358Ta12P043E12P017H101R1_058.ab1   548 
  227    USDA029F_D08_BE518358Ta12P043E12P017H101F1_058.ab1   222 
  247  C USDA029R_D08_BE518358Ta12P043E12P017H101R1_058.ab1   520 
  251    USDA029F_D08_BE518358Ta12P043E12P017H101F1_058.ab1   246 
  331  C USDA029R_D08_BE518358Ta12P043E12P017H101R1_058.ab1   436 
  335    USDA029F_D08_BE518358Ta12P043E12P017H101F1_058.ab1   330 
  367  C USDA029R_D08_BE518358Ta12P043E12P017H101R1_058.ab1   400 
  371    USDA029F_D08_BE518358Ta12P043E12P017H101F1_058.ab1   366 
  403  C USDA029R_D08_BE518358Ta12P043E12P017H101R1_058.ab1   364 
  415    USDA029F_D08_BE518358Ta12P043E12P017H101F1_058.ab1   410 
  435  C USDA029R_D08_BE518358Ta12P043E12P017H101R1_058.ab1   332 
  475    USDA029F_D08_BE518358Ta12P043E12P017H101F1_058.ab1   470 
  479  C USDA029R_D08_BE518358Ta12P043E12P017H101R1_058.ab1   288 
  555    USDA029F_D08_BE518358Ta12P043E12P017H101F1_058.ab1   550 
  559  C USDA029R_D08_BE518358Ta12P043E12P017H101R1_058.ab1   208 
  571    USDA029F_D08_BE518358Ta12P043E12P017H101F1_058.ab1   566 
  575  C USDA029R_D08_BE518358Ta12P043E12P017H101R1_058.ab1   192 
  625    USDA029F_D08_BE518358Ta12P043E12P017H101F1_058.ab1   620 
  633  C USDA029R_D08_BE518358Ta12P043E12P017H101R1_058.ab1   134 
Contig length: old 766, new 766

Contig length: old 766, new 766
New start: 0