No. words: 1512; after pruning: 1486


Histogram of relative pair offsets, for read pairs with multiple alignments:
72     8
99    12

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    5    0.0 12.9 (1,1:666)  649  0.15 0.00 0.00  USDA014F_G01_BE591501Ld01P032C02P032C08F1_003.ab1        1   662 (13)  C USDA014R_G01_BE591501Ld01P032C02P032C08R1_003.ab1   (170)   667     6 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 5       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  328 nodes

 166 str. conn. components

Path
    1  C USDA014R_G01_BE591501Ld01P032C02P032C08R1_003.ab1   837 
  343    USDA014F_G01_BE591501Ld01P032C02P032C08F1_003.ab1   173 
  347  C USDA014R_G01_BE591501Ld01P032C02P032C08R1_003.ab1   491 
  827    USDA014F_G01_BE591501Ld01P032C02P032C08F1_003.ab1   657 
Contig length: old 845, new 845

Contig length: old 845, new 845
New start: 0