No. words: 694; after pruning: 668


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    2    0.0 2.5 (1,1:307)  291  0.00 0.00 0.33  USDA024F_F06_BE637864Ta22P043A07P004D101F1_038.ab1        1   306 (48)  C USDA024R_F06_BE637864Ta22P043A07P004D101R1_038.ab1   (33)   307     3 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 2       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  152 nodes

 78 str. conn. components

Path
    1  C USDA024R_F06_BE637864Ta22P043A07P004D101R1_038.ab1   340 
  189    USDA024F_F06_BE637864Ta22P043A07P004D101F1_038.ab1   156 
  213  C USDA024R_F06_BE637864Ta22P043A07P004D101R1_038.ab1   128 
  233    USDA024F_F06_BE637864Ta22P043A07P004D101F1_038.ab1   200 
  253  C USDA024R_F06_BE637864Ta22P043A07P004D101R1_038.ab1    88 
  261    USDA024F_F06_BE637864Ta22P043A07P004D101F1_038.ab1   228 
Contig length: old 386, new 387

Contig length: old 387, new 387
New start: 0