No. words: 936; after pruning: 910


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 1.5 (1,1:630)  120  0.00 1.56 0.00  USDA014F_F04_BF429033Ld08P032C03P032C09F1_022.ab1        2   129 (0)  C USDA014R_F04_BF429033Ld08P032C03P032C09R1_022.ab1   (176)   631   502 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  58 nodes

 31 str. conn. components

Path
    1  C USDA014R_F04_BF429033Ld08P032C03P032C09R1_022.ab1   807 
Contig length: old 807, new 807

Contig length: old 807, new 807
New start: 0