No. words: 519; after pruning: 493


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    2    0.0 3.3 (1,1:205)  198  0.00 0.49 0.00  USDA034F_G10_BF473056Ta17P035E09P017D031F1_068.ab1        4   206 (59)  C USDA034R_G10_BF473056Ta17P035E09P017D031R1_068.ab1   (50)   204     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 2       1        0

Offset
  1       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  102 nodes

 53 str. conn. components

Path
    1  C USDA034R_G10_BF473056Ta17P035E09P017D031R1_068.ab1   254 
  103    USDA034F_G10_BF473056Ta17P035E09P017D031F1_068.ab1    55 
  119  C USDA034R_G10_BF473056Ta17P035E09P017D031R1_068.ab1   136 
  139    USDA034F_G10_BF473056Ta17P035E09P017D031F1_068.ab1    91 
Contig length: old 313, new 313

Contig length: old 313, new 313
New start: 0