No. words: 1512; after pruning: 1458


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 13.8 (1,1:889)  615  0.32 0.00 0.00  USDA027F_D07_BF474569Td04P035F09P017G091F1_057.ab1      124   745 (0)  C USDA027R_D07_BF474569Td04P035F09P017G091R1_057.ab1   (0)   767   146 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  306 nodes

 155 str. conn. components

Path
    1    USDA027F_D07_BF474569Td04P035F09P017G091F1_057.ab1     1 
  310  C USDA027R_D07_BF474569Td04P035F09P017G091R1_057.ab1   581 
  322    USDA027F_D07_BF474569Td04P035F09P017G091F1_057.ab1   322 
  326  C USDA027R_D07_BF474569Td04P035F09P017G091R1_057.ab1   565 
  330    USDA027F_D07_BF474569Td04P035F09P017G091F1_057.ab1   330 
  338  C USDA027R_D07_BF474569Td04P035F09P017G091R1_057.ab1   553 
  354    USDA027F_D07_BF474569Td04P035F09P017G091F1_057.ab1   354 
  358  C USDA027R_D07_BF474569Td04P035F09P017G091R1_057.ab1   533 
  366    USDA027F_D07_BF474569Td04P035F09P017G091F1_057.ab1   366 
  370  C USDA027R_D07_BF474569Td04P035F09P017G091R1_057.ab1   521 
  374    USDA027F_D07_BF474569Td04P035F09P017G091F1_057.ab1   374 
  378  C USDA027R_D07_BF474569Td04P035F09P017G091R1_057.ab1   513 
  406    USDA027F_D07_BF474569Td04P035F09P017G091F1_057.ab1   406 
  410  C USDA027R_D07_BF474569Td04P035F09P017G091R1_057.ab1   481 
  418    USDA027F_D07_BF474569Td04P035F09P017G091F1_057.ab1   418 
  422  C USDA027R_D07_BF474569Td04P035F09P017G091R1_057.ab1   469 
Contig length: old 890, new 890

Contig length: old 890, new 890
New start: 0