No. words: 1476; after pruning: 1450


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 15.2 (1,1:747)  684  0.00 0.14 0.00  USDA023F_G07_BF474569Td07P043A11P017G091F1_051.ab1        1   690 (0)  C USDA023R_G07_BF474569Td07P043A11P017G091R1_051.ab1   (37)   749    59 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  344 nodes

 174 str. conn. components

Path
    1  C USDA023R_G07_BF474569Td07P043A11P017G091R1_051.ab1   786 
   53    USDA023F_G07_BF474569Td07P043A11P017G091F1_051.ab1    15 
  237  C USDA023R_G07_BF474569Td07P043A11P017G091R1_051.ab1   550 
  245    USDA023F_G07_BF474569Td07P043A11P017G091F1_051.ab1   207 
  257  C USDA023R_G07_BF474569Td07P043A11P017G091R1_051.ab1   530 
  261    USDA023F_G07_BF474569Td07P043A11P017G091F1_051.ab1   223 
  285  C USDA023R_G07_BF474569Td07P043A11P017G091R1_051.ab1   502 
  293    USDA023F_G07_BF474569Td07P043A11P017G091F1_051.ab1   255 
  301  C USDA023R_G07_BF474569Td07P043A11P017G091R1_051.ab1   486 
  313    USDA023F_G07_BF474569Td07P043A11P017G091F1_051.ab1   275 
  377  C USDA023R_G07_BF474569Td07P043A11P017G091R1_051.ab1   410 
Contig length: old 786, new 786

Contig length: old 786, new 786
New start: 0