No. words: 887; after pruning: 861


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)   11    0.0 4.9 (1,1:281)  254  0.00 0.74 0.00  USDA008F_H10_BG313767Ld10P017E02P017E08F1_066.ab1       13   281 (184)  C USDA008R_H10_BG313767Ld10P017E02P017E08R1_066.ab1   (151)   271     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
11       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  130 nodes

 67 str. conn. components

Path
    1  C USDA008R_H10_BG313767Ld10P017E02P017E08R1_066.ab1   422 
  175    USDA008F_H10_BG313767Ld10P017E02P017E08F1_066.ab1    34 
  183  C USDA008R_H10_BG313767Ld10P017E02P017E08R1_066.ab1   240 
  203    USDA008F_H10_BG313767Ld10P017E02P017E08F1_066.ab1    62 
  207  C USDA008R_H10_BG313767Ld10P017E02P017E08R1_066.ab1   216 
  215    USDA008F_H10_BG313767Ld10P017E02P017E08F1_066.ab1    74 
  243  C USDA008R_H10_BG313767Ld10P017E02P017E08R1_066.ab1   180 
  247    USDA008F_H10_BG313767Ld10P017E02P017E08F1_066.ab1   106 
  263  C USDA008R_H10_BG313767Ld10P017E02P017E08R1_066.ab1   160 
  267    USDA008F_H10_BG313767Ld10P017E02P017E08F1_066.ab1   126 
Contig length: old 605, new 606

Contig length: old 606, new 606
New start: 0