No. words: 1206; after pruning: 1166


Histogram of relative pair offsets, for read pairs with multiple alignments:

Pass 1
             Gap  Score    

Pass: 1
#reads  #contigs (not counting singlets)
    1      2

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Pass 3
             Gap  Score    
Merge:(0)    0    0.0 10.7 (1,1:555)  530  0.54 0.00 0.36  USDA018F_G12_BM140362Sn32P035E12P017H081F1_084.ab1        1   557 (34)  C USDA018R_G12_BM140362Sn32P035E12P017H081R1_084.ab1   (60)   555     1 *

Pass: 3
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score
0.0       1        0

Gap   # merges  # failures
 size
 0       1        0

Offset
  0       1 

Pass 4
             Gap  Score    

Pass: 4
#reads  #contigs (not counting singlets)
    2      1

N.B. Following not based on all pairs!!

Lowest   # merges  # failures
LLR score

Gap   # merges  # failures
 size

Offset

Read equivalence class histogram:
    2    1

Chimera merges: 


Contig 1:  264 nodes

 134 str. conn. components

Path
    1  C USDA018R_G12_BM140362Sn32P035E12P017H081R1_084.ab1   615 
  200    USDA018F_G12_BM140362Sn32P035E12P017H081F1_084.ab1   140 
  212  C USDA018R_G12_BM140362Sn32P035E12P017H081R1_084.ab1   404 
  585    USDA018F_G12_BM140362Sn32P035E12P017H081F1_084.ab1   525 
Contig length: old 650, new 651

Contig length: old 651, new 651
New start: 0