Wheat microsatellite WMC 25/06/01
wmc(21f5)
Plate reference : 21f5
WMC locus number : WMC Length of sequence : 161
Last updated : Mar 10 Nov 1998 at 17:06
Owner : Langridge, CRC Australia Date at Agrogene : 22.10.98 Public Domain : Yes
Comments : No trimming done to sequence at Agrogene, ends not located. Bases 117 to 141 (complement) show homology to 22g11 bases 112 to 136 (25 in longest run, maxScore = 33). (GT)5 25 to 34, (GT)15 53 to 82. Too difficult to make primer.
PCR Comments :
Length of sequence : 161 Consensus sequence is :
..
TGGACTAGTG CTCGGGGGGA GGGGGTGTGT GTGTGATGTG TGATGTCTCT
CTGTGTGTGT GTGTGTGTGT GTGTGTGTGT GTGATATTGA GAGAAAACAA
ACCTAACGAG AGAAATGTGT GTGTATGTGA CGGAAAGCTA CTTGCTAAAC
AGGGTAGtCC A
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wmc(21g5)
Plate reference : 21g5
WMC locus number : WMC Length of sequence : 6
Last updated : Jeu 29 Oct 1998 at 16:50
Owner : Langridge, CRC Australia Date at Agrogene : 22.10.98 Public Domain : Yes
Comments : No sequence 22.10.98. No trimming done to sequence at Agrogene, ends not located.
PCR Comments :
No sequence available for this clone
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wmc(21h5)
Plate reference : 21h5
WMC locus number : WMC Length of sequence : 212
Last updated : Lun 2 Nov 1998 at 10:54
Owner : Langridge, CRC Australia Date at Agrogene : 22.10.98 Public Domain : Yes
Comments : No trimming done to sequence at Agrogene, ends not located. Bases 8 to 72 (complement) show homology to 9d4 bases 374 to 438 (65 in longest run, maxScore = 83). (CA)10 128 to 147, (CT)5 177 to 186, (CA)6 187 to 198. No room for primer.
PCR Comments :
Length of sequence : 212 Consensus sequence is :
..
TGGACTACCC TCTCTACGGG CATTTTCTCT CTCGCACCCC ATCGTTGGTG
GCCTCTGCCA TACACATCAC CTTTCTATGA TGAAGCCATG CACACTTAAA
TTACATCCAC CACCAAGGAC CCCGCGACAC ACACACACAC ACACACACCc
TCCACACAcT AATACTCCAT CTCTTTCTCT CTCTCTCACA CACACACACG
CACGCTAGTC CA
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wmc(21a6)
Plate reference : 21a6
WMC locus number : WMC Length of sequence : 6
Last updated : Jeu 29 Oct 1998 at 16:50
Owner : Langridge, CRC Australia Date at Agrogene : 22.10.98 Public Domain : Yes
Comments : No sequence 22.10.98.
PCR Comments :
No sequence available for this clone
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wmc(21b6)
Plate reference : 21b6
WMC locus number : WMC Length of sequence : 266
Last updated : Lun 2 Nov 1998 at 10:02
Owner : Langridge, CRC Australia Date at Agrogene : 22.10.98 Public Domain : Yes
Comments : No trimming done to sequence at Agrogene, ends not located. Bases 43 to 67 show homology to 8c1.2 bases 113 to 137 (25 in longest run, maxScore = 52). No substantial microsatellite.
PCR Comments :
Length of sequence : 266 Consensus sequence is :
..
TGGACTAACC CGTCTAAAAC CccTcCATAC TCTCCGTCAT TGGATCACGA
TCGTGTGGGC GAAAACCACA CCTCATTTGG ACACTCcTAG ATCCCTCTAC
CTATATATAT GTGCCCCTCC CCAAAAATTC GCAGTCAAAC CCTAGCACCG
CTCCCCTCGC GCCGCCGGAT GTGTCTGCTG GCCACGTATC CTCCACCAAT
CGGACGCCGC CACGTCAGCc TCGCCGCcGC CGCACCCAAC CGGTTTGCGC
CACGTGGCcT AGTccA
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wmc(21c6)
Plate reference : 21c6
WMC locus number : WMC Length of sequence : 62
Last updated : Jeu 29 Oct 1998 at 16:50
Owner : Langridge, CRC Australia Date at Agrogene : 22.10.98 Public Domain : Yes
Comments : No trimming done to sequence at Agrogene, ends not located. No substantial microsatellite.
PCR Comments :
Length of sequence : 62 Consensus sequence is :
..
TCTCTTTCTA agTcTCTCTc attaGgtgtT GTcTCcTACT CTCTCGTCCC
CaTATAGTAc cA
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wmc(21d6)
Plate reference : 21d6
WMC locus number : WMC Length of sequence : 228
Last updated : Jeu 29 Oct 1998 at 16:50
Owner : Langridge, CRC Australia Date at Agrogene : 22.10.98 Public Domain : Yes
Comments : No trimming done to sequence at Agrogene, ends not located. No substantial microsatellite.
PCR Comments :
Length of sequence : 228 Consensus sequence is :
..
TGGAgTacGA CTagACCGgt GaTTAAACGA GACGACGGTC AGGCCTcGAT
GAAGCGGAAG CAGCCGATGC CGGTTATatG tGACGAACGG TCCGACGGAG
AAGCACAGAA CAACCCTGCC AACTGAGAAG CGGCGGCGGT CGGCGGCGAG
GGATGATCCA GATAACCAGA ATGCCGTcGA AGcttccGCT atTCATGAGA
cGatAgagAg cGAGGCCAAG cTAGtccA
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wmc(21e6.1)
Plate reference : 21e6.1
WMC locus number : WMC Length of sequence : 204
Last updated : Lun 2 Nov 1998 at 10:02
Owner : Langridge, CRC Australia Date at Agrogene : 22.10.98 Public Domain : Yes
Comments : Multiple inserts in this clone, this is the first insert. Trimmed to insert at 3' end, 5' end not located. Bases 110 to 120 show homology to 14a3 bases 196 to 206 (11 in longest run, maxScore = 42). No substantial microsatellite.
PCR Comments :
Length of sequence : 204 Consensus sequence is :
..
TGGAaTAGgC GGCGGcTGCG GCaGcGACaG ACGAACaGCC ATCGAGcGAA
GGCCGGaGAt gAAgAgcAgA GAtGGCGTga TCGGTCgTGG GGGcGAcTAA
GCGGCAGCTA AAGCTGCAAG tAACCAGAGA CttTGAAGAG GGCGTCAGTA
GCAcGTcGAA GCGGGATACG cTGAATCACA AGTCTAtgTG GGGATCGTCT
AGAG
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wmc(21e6.2)
Plate reference : 21e6.2
WMC locus number : WMC Length of sequence : 97
Last updated : Jeu 29 Oct 1998 at 16:50
Owner : Langridge, CRC Australia Date at Agrogene : 22.10.98 Public Domain : Yes
Comments : Multiple inserts in this clone, this is the second insert. Trimmed to insert at 5' end, 3' end not located. No substantial microsatellite.
PCR Comments :
Length of sequence : 97 Consensus sequence is :
..
GGGCCCCAAT TTCCAGCCAC CTAATGTGGC GAGCCTACCT CCATTAGCTA
CAAAGGGccA CaCTAGTAGA AAAAGGGTCT gAATGTGAAG TAGTccA
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wmc426(21f6)
Plate reference : 21f6
WMC locus number : WMC426 Length of sequence : 214
Last updated : Lun 28 DŽc 1998 at 10:12
Owner : Langridge, CRC Australia Date at Agrogene : 22.10.98 Public Domain : Yes
Comments : No trimming done to sequence at Agrogene, ends not located. (CA)4 111 to 118, (CA)15 121 to 150. Bases 6 to 47 show homology to 21h9 bases 132 to 173 (complement) (42 in longest run, maxScore = 64). Duplicate with 21h9, 21f6 has priority.
PCR Comments : 51C anneal, polymorphic on acrylamide (200-206 bases above a smaller smear).
Forward primer details :
gAcgATcgTTTcTccTAcTTTA at 8 length 22 bases, Tm 57
Reverse primer details :
AcTAcAcAAATgAcTgcTgcTA at 190 length 22 bases, Tm 57
Expected size of amplified fragment (Chinese Spring=) 204 bases.
Length of sequence : 214 Consensus sequence is :
..
TGGAgTAGAC GATcGTTTCT CcTACTtTaG aATGCaTGCA aTtGTTTATT
AAGGTGTGTG tGaaTGATCT GTATAGTCAC TTACGTaATT GGATGTTTAT
TTCAGTTaTA CACACACACG CACACACACA CACACACACA CACACACACA
TGTTATTCTT CTGTAGACAG AGCaaaTCAC aCGGCTTATT AGCAGCAGTC
ATTTGTGTAG TcCA
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wmc(21g6)
Plate reference : 21g6
WMC locus number : WMC Length of sequence : 6
Last updated : Jeu 29 Oct 1998 at 16:50
Owner : Langridge, CRC Australia Date at Agrogene : 22.10.98 Public Domain : Yes
Comments : No sequence 22.10.98.
PCR Comments :
No sequence available for this clone
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wmc(21h6)
Plate reference : 21h6
WMC locus number : WMC Length of sequence : 164
Last updated : Mar 10 Nov 1998 at 17:26
Owner : Langridge, CRC Australia Date at Agrogene : 22.10.98 Public Domain : Yes
Comments : No trimming done to sequence at Agrogene, ends not located. Bases 47 to 72 show homology to 19a5 bases 101 to 126 (26 in longest run, maxScore = 23). (GGT)8 48 to 71, (GT)31 78 to 139, (GTGC)4 140 to 155. No room for primer.
PCR Comments :
Length of sequence : 164 Consensus sequence is :
..
TGGACTAGGA ACCGGTGAGC AGCTTGCTTC TCTCCCTTAT AGCGTGTGGT
GGTGGTGGTG GTGGTGGTGG TGTGTGGGTG TGTGTGTGTG TGTGTGTGTG
TGTGTGTGTG TGTGTGtGTG TGTGTGTGTG TGTGTGTGtG CGTGCGTGCG
TGCGTGTAgT AcCA
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wmc(24a1)
Plate reference : 24a1
WMC locus number : WMC Length of sequence : 141
Last updated : Jeu 29 Oct 1998 at 16:50
Owner : Romestant, RAGT Date at Agrogene : 29.10.98 Public Domain : Yes
Comments : Trimmed to insert at both ends ( NB 5' linker corrupted). No substantial microsatellite.
PCR Comments :
Length of sequence : 141 Consensus sequence is :
..
TGTGGTGTCA GAAGTAATTA ATCTCGGATA CTGTAACCTG CAGACTACAG
CTAGTTCTGC AGCTACCTAG AGTCAACTCT TAATTTGTAC TTAGCATAGG
ATCAAGTACG TTTCCGGAAT ATCTCAACCT GCAAGTGTTG T
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wmc(24b1)
Plate reference : 24b1
WMC locus number : WMC Length of sequence : 235
Last updated : Mar 10 Nov 1998 at 17:31
Owner : Romestant, RAGT Date at Agrogene : 29.10.98 Public Domain : Yes
Comments : Trimmed to Ssp1 at 5' end and to insert at 3' end. (CA)14 200 to 227. No room for primer.
PCR Comments :
Length of sequence : 235 Consensus sequence is :
..
AATATTTTAT TGGAGTACAT GTCACTAAAA ATAGGAGTTC AATTCGCTCA
TGCATCCATA TATTTTAGAT ATTCCTACCA ACCTATTGGG AAAATAGACG
GGTGCAGCAA CGCGCGCCGT CATGGTCTAG TAACCAAATA TGGTAAGGGG
GCACGGCTAG GCAGGCGCCC TAGGGGCTGC CTCTCCTCCC CCACCTATAC
ACACACACAC ACACACACAC ACACACATAA ACAAT
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wmc(24c1)
Plate reference : 24c1
WMC locus number : WMC Length of sequence : 204
Last updated : Mar 10 Nov 1998 at 17:33
Owner : Romestant, RAGT Date at Agrogene : 29.10.98 Public Domain : Yes
Comments : Trimmed to insert at both ends ( NB 3' linker corrupted). Bases 82 to 156 show homology to 11c5 bases 189 to 263 (75 in longest run, maxScore = 82). (CA)26 105 to 156. Duplicate, 11c5 has precedence.
PCR Comments :
Length of sequence : 204 Consensus sequence is :
..
GGGGACATGT TACAGATATC AACATAAACA GAGTTTGGAT CAACTCCAGC
TTAATCAACA TGTCAAGTCT TTTGACTTGA CCCAAGTGGT TCTTTCCACT
CATCCACACA CACACACACA CACACACACA CACACACACA CACACACACA
CACACATCAG GTTCCGCAAA CATTTGGACG TAGCCCAAGA GCAGTTACCT
AACT
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wmc(24d1)
Plate reference : 24d1
WMC locus number : WMC Length of sequence : 259
Last updated : Mar 22 DŽc 1998 at 9:41
Owner : Romestant, RAGT Date at Agrogene : 29.10.98 Public Domain : Yes
Comments : Trimmed to insert at 5' end and to Ssp1 at 3' end. Bases 7 to 171 (complement) show homology to 11h2 bases 123 to 287 (165 in longest run, maxScore = 171). No substantial microsatellite. Duplicate, 11h2 has precedence. Bases 44 to 113 show homology to 2A1 bases 137 to 206 (complement) (70 in longest run, maxScore = 148).
PCR Comments :
Length of sequence : 259 Consensus sequence is :
..
CTCCCCCGAG CACACAATTC ATCCCCATCC AAGGTTATAC GGCGACCACT
CTCGCTTGTG CTTCTTTGCA CCCCAACATG CACAACACCT CAATCTTCAA
AGAGGGCATC GAGCAGATCA AAGACGGCGA CCACACCGCG CTAGAGAATG
CGGGGTCATT TGGAAGCAGG GCGATGTGAC GACGGCTGAC TGACTCCTCC
CCCCACCCTC TCCCTATCTC TTGCACAAAA TTACCAATCT CTCTCCCCCG
CACAATATT
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wmc(24e1)
Plate reference : 24e1
WMC locus number : WMC Length of sequence : 271
Last updated : Mar 22 DŽc 1998 at 9:42
Owner : Romestant, RAGT Date at Agrogene : 29.10.98 Public Domain : Yes
Comments : Trimmed to insert at both ends. Bases 222 to 229 (complement) show homology to 8a2 bases 93 to 100 (8 in longest run, maxScore = 21). No substantial microsatellite. Bases 128 to 141 show homology to 20e9 bases 143 to 156 (complement) (14 in longest run, maxScore = 21).
PCR Comments :
Length of sequence : 271 Consensus sequence is :
..
CCCGAGGTCG TGGCAACAAC AACAACTCCA GCCGCTACCA TAACTCCAAC
AGGAGTGGTG GTGGTGGATC TCGTGGTGGC GGCGGTGGTC CTTACCAGAA
CGGTGGCAAC GGCGGCGGTG GTCACTACAA CAACTCCAAC ACCGGTGGCG
GCGGTGGCGG CTACAACAAC TACAACAGCG GCGGCGGTGG TGGCGGCGGC
CACTACCAGA ACGCCGGCGG CGGTGGTGGC GGTGGTCACT ACTAGAACGG
CGGCGGCAAC AACAGACGCC C
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wmc(24f1)
Plate reference : 24f1
WMC locus number : WMC Length of sequence : 164
Last updated : Mar 10 Nov 1998 at 17:37
Owner : Romestant, RAGT Date at Agrogene : 29.10.98 Public Domain : Yes
Comments : Trimmed to insert at both ends. Bases 69 to 151 (complement) show homology to 7g6 bases 1 to 83 (83 in longest run, maxScore = 108). (CA)13 42 to 67. Duplicate, 7g6 has precedence.
PCR Comments :
Length of sequence : 164 Consensus sequence is :
..
CCACCCCCTC CTCCAGGACA GGGGTTCGCA TCTTTTGTAA ACACACACAC
ACACACACAC ACACACATAC ATAATCCAGC CGACCGCCCC AGGGCATCGA
GACGTAGGGC TATTACTTTC TCCGAGAAGG GCCTGAATTC GTAAACTCGT
GTGTACAACT ACTC
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wmc(24g1)
Plate reference : 24g1
WMC locus number : WMC Length of sequence : 371
Last updated : Mar 10 Nov 1998 at 17:38
Owner : Romestant, RAGT Date at Agrogene : 29.10.98 Public Domain : Yes
Comments : Trimmed to insert at 5' end and to Ssp1 at 3' end. (CA)24 1 to 48. No room for primer.
PCR Comments :
Length of sequence : 371 Consensus sequence is :
..
CACACACACA CACACACACA CACACACACA CACACACACA CACACACACC
TGTCACTAAA CCACCCAATT GCAAGTGAAT GTCTAATAAT TTTCAAATTA
ATATAGTGAC TGACATGTCT CCCGAGCTAG GGCCTACACC TAGTCCATTC
AACATCCCAC ATACGCCGGC TCATTTTTAA ATTGTGTATT TGTTTTCGAA
AATGCATCAA CATTGTTTTT TCAAACGTAA ACACTTTTTA AATCACATGA
TCTTTTAACA GCATAAATAG TTTTAAAACT ATAATATATG TTTAAGCACG
TGGACACTTT TTTGAACTAC ATGATTTTTT TTCTAAAACA ACTATGAACA
TTTTTCAATT ATATGAATAT T
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wmc(24h1)
Plate reference : 24h1
WMC locus number : WMC Length of sequence : 274
Last updated : Mar 5 Jan 1999 at 15:36
Owner : Romestant, RAGT Date at Agrogene : 29.10.98 Public Domain : Yes
Comments : Trimmed to insert at both ends. No substantial microsatellite. Bases 157 to 227 show homology to 20f7 bases 190 to 260 (71 in longest run, maxScore = 118). Duplicate with 20f7, 24h1 has priority.
PCR Comments :
Length of sequence : 274 Consensus sequence is :
..
GGAAAGAGGG TTCGAGGTGG TGCTCACTGG CGGCGAACGT GGCGGCGAAC
CGAGGCGGCG GCGGCGAGAT GCGAATGGCG ATGGCGTGCG ATGTGGTGGG
TTTGAGCGTA GGGTTTTAGG GGGTTCGAGG GAGGTCGAGC TTGGCCTTTT
ATAGGGCATC AACTTGGAGG AGGGGGCGTC TCGGGATTAC GATCCCGAGA
GGATCGGAAC CGCGGCGGCG GCGGTCGTGC TCTGGGCGGC GTTTGCGTGC
GCGAGAGGAA AGAGAAGGGG TGGG
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wmc(24a2)
Plate reference : 24a2
WMC locus number : WMC Length of sequence : 6
Last updated : Jeu 29 Oct 1998 at 16:50
Owner : ITCF Date at Agrogene : 29.10.98 Public Domain : Yes
Comments : No sequence 29.10.98.
PCR Comments :
No sequence available for this clone
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wmc(24b2)
Plate reference : 24b2
WMC locus number : WMC Length of sequence : 184
Last updated : Jeu 12 Nov 1998 at 13:53
Owner : ITCF Date at Agrogene : 29.10.98 Public Domain : Yes
Comments : Trimmed to insert at both ends. Bases 26 to 51 show homology to 17e12 bases 205 to 230 (26 in longest run, maxScore = 49). (GT)18 12 to 47, (GT)6 149 to 160, (GT)3 163 to 168. No room for primer.
PCR Comments :
Length of sequence : 184 Consensus sequence is :
..
CGCAACTAAA GGTGTGTGTG TGTGTGTGTG TGTGTGTGTG TGTGTGTTTG
TGGAGGGTCC CCAGTTTCAT GTCAACCATC GACTCGCAAC TAGGGGGTGT
TTTGTCATGG CCCCCAGTTG CAAGCCAACC ATCGCCTCGC AACTAAGAGT
GTGTGTGTGT CTGTGTGTTT GTTGGTCGAG GGTC
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wmc(24c2)
Plate reference : 24c2
WMC locus number : WMC Length of sequence : 312
Last updated : Lun 30 oct 2000 at 16:59
Owner : ITCF Date at Agrogene : 29.10.98 Public Domain : Yes
Comments : Trimmed to insert at both ends. Bases 124 to 176 show homology to 10h10 bases 127 to 179 (53 in longest run, maxScore = 102). (CT)15 21 to 50. Duplicate, 10h10 has precedence. Bases 66 to 81 show homology to 20h9 bases 74 to 89 (16 in longest run, maxScore = 24). Bases 20 to 44 show homology to TW5c04 bases 51 to 75 (25 in longest run, maxScore = 31). Bases 20 to 81 show homology to TW5g07 bases 95 to 156 (62 in longest run, maxScore = 33). Bases 82 to 131 show homology to TW7b03 bases 8 to 57 (complement) (50 in longest run, maxScore = 57).
PCR Comments :
Length of sequence : 312 Consensus sequence is :
..
CCAGTAGCTA TGTGTTTGAT CTCTCTCTCT CTCTCTCTCT CTCTCTCTCT
CGTGTTCTTG ATTTGGCACG ATCTTGATGT ATCGCGAGCT TTGCTATTAT
AGTTGGATCT TATGATGTTT CTCCCCCTCT ACTCTCTTGT AATGGATTGA
GTTTTCCCTT TGAAGTTATC TTATCGATTC TTTAAGGATT TGAGAACACT
TGATGTATGT CTTGCCGTGC TTATCTATGG TGACAATGGG ATATTCACGT
GATCTACTTG ATGTATGTTT TGGTGATCAA CTTGCGGGTT CAGTGACCTT
GTGAACTTAT GC
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wmc(24d2)
Plate reference : 24d2
WMC locus number : WMC Length of sequence : 6
Last updated : Jeu 29 Oct 1998 at 16:50
Owner : ITCF Date at Agrogene : 29.10.98 Public Domain : Yes
Comments : No sequence 29.10.98.
PCR Comments :
No sequence available for this clone
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wmc(24e2)
Plate reference : 24e2
WMC locus number : WMC Length of sequence : 425
Last updated : Lun 2 Nov 1998 at 10:03
Owner : ITCF Date at Agrogene : 29.10.98 Public Domain : Yes
Comments : Trimmed to insert at 5' end and to Ssp1 at 3' end. Bases 16 to 31 show homology to 7g4 bases 91 to 106 (16 in longest run, maxScore = 19). No substantial microsatellite.
PCR Comments :
Length of sequence : 425 Consensus sequence is :
..
CTTTATTATT GCCTATAGGG CATATTTCCT TTAGTGTCGG GCTTCCCGGT
GTTGCGATGC AACACTTTGT CAGCGGCGGC CGCGAGCGGC GGCGGCCAGT
TGCACCATAA GGGGATGGGA AGCATGTTTC TCTACAGCAT CACTGACGAG
CGAGGACCAG CGAAAGACGC AGTCTATCTT GGGGAAAGCT GTGGCCGGTT
GCGGATGTTG AGGGGGATGA ATACACTGCA AGAGTGCGGA GAGCAACGCG
GGATCCCCGA GGCCCAATGC GACAGTTGTG ATGGGGTGCA TCTAACGGCC
ATGGAGGCGA CTTATGTTTC CCTCAAATCA ACCGGTTTAC GGCTAGCACT
AGCCTTTTTC TTATGCTTCG ATTGCATGTC GTGATAGTCT TTTTTCGTGC
ATGATGTATG ATGAGGTGGA ATATT
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wmc(24f2)
Plate reference : 24f2
WMC locus number : WMC Length of sequence : 150
Last updated : Jeu 12 Nov 1998 at 14:26
Owner : ITCF Date at Agrogene : 29.10.98 Public Domain : Yes
Comments : Trimmed to insert at both ends. (GT)13 1 to 26. No room for primer.
PCR Comments :
Length of sequence : 150 Consensus sequence is :
..
GTGTGTGTGT GTGTGTGTGT GTGTGTGATC AGATCACATG TTGAAGTCCT
ATTTATGCAT GTGCCACACA AATCTATCTT CTTATAGGTG AACTATTCAA
AGAACAAGGC CAACCATATG AAAGTGAAAT TCCAACAGAC GACAGGATCT
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wmc427(24g2)
Plate reference : 24g2
WMC locus number : WMC427 Length of sequence : 338
Last updated : Jeu 12 Nov 1998 at 14:30
Owner : ITCF Date at Agrogene : 29.10.98 Public Domain : Yes
Comments : Trimmed to insert at both ends. (GCC)6 71 to 88.
PCR Comments : 61C anneal, product.
Forward primer details :
cgAggTAggAAgcAgAgggAgT at 9 length 22 bases, Tm 65
Reverse primer details :
cTccccccAcATggAAgTAAAc at 153 length 22 bases, Tm 65
Expected size of amplified fragment (Chinese Spring=) 166 bases.
Length of sequence : 338 Consensus sequence is :
..
GGGAGGGGCG AGGTAGGAAG CAGAGGGAGT TCGTTTGCTC CGGCCCCTAG
CCGTCGTCCA GTCCTTCCTC GCCGCCGCCG CCGCCGCCCT CCCCCGTCGC
TCTCGCCCTC TTCTCCTTTT TCTTTTGAGA CGACGAGCCG AGACAAGACG
TGGTTTACTT CCATGTGGGG GGAGATGTGG CTCAAAACCC GGTCGAATCC
CTGCGGTTTC GGAGGGGTTT GGGTGGGAAA TAAACCCGGC CGGGTTTAAC
CGAATATGTA TATAAGCTAA GCGGGGATCC AACCCCTGCG AGGGTAAAAC
CCACGGGGTT CGGGCCAAAA CCCCTCCGAT CCCGGCGG
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wmc(24h2)
Plate reference : 24h2
WMC locus number : WMC Length of sequence : 238
Last updated : Lun 30 oct 2000 at 16:59
Owner : ITCF Date at Agrogene : 29.10.98 Public Domain : Yes
Comments : Trimmed to insert at both ends. Bases 67 to 139 show homology to 3A1 bases 668 to 740 (73 in longest run, maxScore = 126). (GA)14 204 to 231, Duplicate with 3a1, 3a1 has precedence. Bases 82 to 139 show homology to TW1g04.1 bases 9 to 66 (58 in longest run, maxScore = 93). Bases 174 to 190 show homology to TW6c10.2 bases 148 to 164 (17 in longest run, maxScore = 48).
PCR Comments :
Length of sequence : 238 Consensus sequence is :
..
GTGAATATCC CATTGTCACC ACAGATAAGC ACATGCAAGA CATACATCAA
GTGTTCTCAA ATCCTTAAAG ACTCAATCCG ATAAGATAAC TTCAAAGGGA
AAACTCAATC CATTACAAGA GAGTAGAGGG GGAGAAACAC CATAAGATCC
AACTATAATA GCAAAGCTCG CGATACATCA AGATCGTGCC GAATCAAGAA
CACGAGAGAG AGAGAGAGAG AGAGAGAGAG AGGTAGAG
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wmc428(24a3)
Plate reference : 24a3
WMC locus number : WMC428 Length of sequence : 295
Last updated : Jeu 12 Nov 1998 at 15:08
Owner : ITCF Date at Agrogene : 29.10.98 Public Domain : Yes
Comments : Trimmed to insert at both ends. Bases 166 to 263 (complement) show homology to 11g10.1 bases 378 to 475 (98 in longest run, maxScore = 86). (CA)25 186 to 235, (CA)4 247 to 254.
PCR Comments : 51C anneal, polymorphic on acrylamide.
Forward primer details :
TTAATccTAgccgTcccTTTTT at 39 length 22 bases, Tm 62
Reverse primer details :
cgAccTTcgTTggTTATTTgTg at 274 length 22 bases, Tm 63
Expected size of amplified fragment (Chinese Spring=) 257 bases.
Length of sequence : 295 Consensus sequence is :
..
GGTCCGATTG ATCCAAACCG CACTTCTTTT ATTTCTTATT AATCCTAGCC
GTCCCTTTTT CTACTTTAAT AATAATGTAG TTGGTAGATG ATGCATTTTT
TTTGGAACAA TACATAAAGA TAATTTAGAA CTGGATAATG CTATAATTGT
GCTTAAAGAT CCATTTGCAG GTTATCACCC TACTCCACAC ACACACACAC
ACACACACAC ACACACACAC ACACACACAC ACACACTTGC ACACACCACA
CACAAGTGCA CCGGCTTAAG ACACACAAAT AACCAACGAA GGTCG
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wmc(24b3)
Plate reference : 24b3
WMC locus number : WMC Length of sequence : 82
Last updated : Jeu 29 Oct 1998 at 16:50
Owner : ITCF Date at Agrogene : 29.10.98 Public Domain : Yes
Comments : Trimmed to Ssp1 at 5' end and to insert at 3' end (NB 3' linker corrupted). No substantial microsatellite.
PCR Comments :
Length of sequence : 82 Consensus sequence is :
..
AATATTGTCG TGCCAAAAAA CAAGCAAAAA AAAACGAGCA AAAAAATGGG
CAAAAAATCA CGATCCAGAT CTAGATTCTA AA
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wmc429(24c3)
Plate reference : 24c3
WMC locus number : WMC429 Length of sequence : 367
Last updated : Mar 22 DŽc 1998 at 9:42
Owner : ITCF Date at Agrogene : 29.10.98 Public Domain : Yes
Comments : Trimmed to Ssp1 at 5' end and to insert at 3' end. Bases 274 to 296 show homology to 11b12 bases 459 to 481 (23 in longest run, maxScore = 69). (GT)31 156 to 217, Bases 173 to 228 show homology to 21f10 bases 24 to 79 (complement) (56 in longest run, maxScore = 20). Bases 6 to 34 show homology to 25c9 bases 322 to 350 (complement) (29 in longest run, maxScore = 25).
PCR Comments : 61C anneal, polymorphic on acrylamide.
Forward primer details :
cgTAAAgATTTTcATTTggcg at 41 length 21 bases, Tm 61
Reverse primer details :
AAcggcAgcTTgAAAAcATAg at 245 length 21 bases, Tm 61
Expected size of amplified fragment (Chinese Spring=) 225 bases.
Length of sequence : 367 Consensus sequence is :
..
AATATTTCCT ATACGGTGGG TAACGCCACC ACCACATTTT CGTAAAGATT
TTCATTTGGC GTCATGATTG AATTATCTCC ATATTTGGTT TGTCTTCAAC
ATTGGTTTAT CATCATGGTT TATCTTTGCA ATGTTGTTTT GGTCTTCACT
GATATGTGTG TGTGTGTGTG TGTGTGTGTG TGTGTGTGTG TGTGTGTGTG
TGTGTGTGTG TGTGTGTTCT GTCCTCTATA GCATTCACTT ATAGCTATGT
TTTCAAGCTG CCGTTTTTCT GCGCTAAGTG AATGTGATCG GACCCTAACC
CCTTATGTGC TTATCCCTCA AATTCTCTCC ATCTCTTCAT ATGCATTCTA
TTGACACATG TCGAATG
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wmc430(24d3)
Plate reference : 24d3
WMC locus number : WMC430 Length of sequence : 259
Last updated : Jeu 12 Nov 1998 at 15:55
Owner : ITCF Date at Agrogene : 29.10.98 Public Domain : Yes
Comments : Trimmed to Ssp1 at 5' end and to insert at 3' end. Bases 161 to 195 (complement) show homology to 17b11 bases 59 to 93 (35 in longest run, maxScore = 54). Homology is on one side of microsatellite. (GT)10 55 to 74, (GT)4 79 to 86, (GT)14 131 to 158, (GT)5 249 to 258. Foward primer no match to 17B11, reverse primer last base does not match 17B11
PCR Comments : 51C anneal, polymorphic on acrylamide.
Forward primer details :
cAgTTgcAAgTTggccATAg at 16 length 20 bases, Tm 61
Reverse primer details :
TAgggAccccTTgAcAAAAA at 160 length 20 bases, Tm 61
Expected size of amplified fragment (Chinese Spring=) 164 bases.
Length of sequence : 259 Consensus sequence is :
..
AATATTCGTG GCCCCCAGTT GCAAGTTGGC CATAGACTCG CAACTAGGGG
AGATGTGTGT GTGTGTGTGT GTGTCTATGT GTGTGTCGAG TGTCCCCAAT
TACATGTCGA TAACCGACTT GCGGCTGGAG GTGTGTGTGT GTGTGTGTGT
GTGTGTGTCT TTTTGTCAAG GGGTCCCTAG TTGCATGTCA AGCATTGAAT
CGCAACTAGG GTCCCCAGTT GCATGTCAAT AATCGACTCG CAACTAGGGT
GTGTGTGTG
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wmc431(24e3.1)
Plate reference : 24e3.1
WMC locus number : WMC431 Length of sequence : 307
Last updated : Mar 17 Nov 1998 at 14:50
Owner : ITCF Date at Agrogene : 29.10.98 Public Domain : Yes
Comments : Multiple inserts in this clone, this is the first insert. Trimmed to insert at both ends. Bases 181 to 221 show homology to 3f6 bases 197 to 237 (41 in longest run, maxScore = 70). Homology to one side of microsatellite. (GT)4 136 to 143, (CA)17 174 to 207.
PCR Comments : 61C anneal, stuttery smear.
Forward primer details :
gcgAAgAccgATAATAAcAcAgA at 94 length 23 bases, Tm 62
Reverse primer details :
TgcAAATgccATggTTATAgTAg at 260 length 22 bases, Tm 61
Expected size of amplified fragment (Chinese Spring=) 189 bases.
Length of sequence : 307 Consensus sequence is :
..
GAACTGTTTG TGTTGAGACA AGAGAGCATA AACGGTTCAA TATAACAAGA
TGTGTGTGAT ACGCGGCAAA CAGGTGTGTA ATTAGAAATG TGTGCGAAGA
CCGATAATAA CACAGAAGAT TGCTGATAAT AAGATGTGTG TGTTGTGTGA
TGGGATTGCA TACAGAACAA CATCACACAC ACACACACAC ACACACACAC
ACACACACTT ATAAGGACAT GGTTGCATAA CCAAATTAAA CATTCACTTA
CATAGGTGGC TACTATAACC ATGGCATTTG CACACACCAA CATAAACTAT
TACATGC
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wmc(24e3.2)
Plate reference : 24e3.2
WMC locus number : WMC Length of sequence : 246
Last updated : Jeu 29 Oct 1998 at 16:50
Owner : ITCF Date at Agrogene : 29.10.98 Public Domain : Yes
Comments : Multiple inserts in this clone, this is the second insert. Trimmed to insert at both ends. No substantial microsatellite.
PCR Comments :
Length of sequence : 246 Consensus sequence is :
..
GGGATGGACT GACAGACGTG GCGGCGGTGG CATATCCAGG CACAAAATCA
CCTGCGGCGG AGGCGGGCGG TCAGCGGCGG GGGACTCAAA TCGTTGGGTG
GCGACGGCGT TTCCGGGCAG AAATCGCGTG GTGAGGAGGC GGGCGGGCGG
GTGGAAGTGA ATTTAAGGTG GTTGGATGGT TGGCGCGCGG CCGCCAGTTT
TACATCTCCT GGAGGTAGAG ATGTAAATTT GGATCTCCAG ACGTTG
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wmc(24f3)
Plate reference : 24f3
WMC locus number : WMC Length of sequence : 6
Last updated : Jeu 29 Oct 1998 at 16:50
Owner : ITCF Date at Agrogene : 29.10.98 Public Domain : Yes
Comments : No sequence 29.10.98.
PCR Comments :
No sequence available for this clone
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wmc(24g3)
Plate reference : 24g3
WMC locus number : WMC Length of sequence : 199
Last updated : Ven 13 Nov 1998 at 11:48
Owner : ITCF Date at Agrogene : 29.10.98 Public Domain : Yes
Comments : Trimmed to insert at both ends. Bases 34 to 61 (complement) show homology to 19d3 bases 128 to 155 (28 in longest run, maxScore = 46). Duplicate 19d3 has priority. (CA)7 73 to 86, (CA)4 109 to 116, (CA)9 119 to 136.
PCR Comments :
Length of sequence : 199 Consensus sequence is :
..
CCCGGCATTT CACTCCCGCG TAGTAAAATT TTCAGTACCC GCGTCATTTC
CTCAAACACC CCGCGCCCCC TCCACACACA CACACACCAA AACCTCCTCA
GGCGTGCGCA CACACAGACA CACACACACA CACACACCCT CCCTCGCTCG
AAACCCTAGC AAGGTCCCAA CCGCCGCCGC CGTCGCGGCC GCAAGGCCT
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wmc(24h3)
Plate reference : 24h3
WMC locus number : WMC Length of sequence : 6
Last updated : Jeu 29 Oct 1998 at 16:50
Owner : ITCF Date at Agrogene : 29.10.98 Public Domain : Yes
Comments : No sequence 29.10.98.
PCR Comments :
No sequence available for this clone
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wmc433(24a4)
Plate reference : 24a4
WMC locus number : WMC433 Length of sequence : 196
Last updated : Ven 13 Nov 1998 at 13:37
Owner : ITCF Date at Agrogene : 29.10.98 Public Domain : Yes
Comments : Trimmed to insert at both ends. Bases 118 to 159 show homology to 14c4 bases 348 to 389 (42 in longest run, maxScore = 63). Bases 1 to 196 show homology to 24d4 bases 1 to 196 (196 in longest run, maxScore = 127), duplicate with 24d4, 24a4 has priority. (GT)7 24 to 37, (GT)7 56 to 69, (GT)11 82 to 103.
PCR Comments : tested 61C anneal, no product; tested 51C anneal, no product.
Forward primer details :
gATgAATTgTATgcTcgggg at 2 length 20 bases, Tm 62
Reverse primer details :
ccTTAggTTTgTTTccgcTc at 112 length 20 bases, Tm 60
Expected size of amplified fragment (Chinese Spring=) 130 bases.
Length of sequence : 196 Consensus sequence is :
..
GGATGAATTG TATGCTCGGG GGAGTGTGTG TGTGTGTTGT GCTGCGTGCG
TGCATGTGTG TGTGTGTGTA TGTGTGCGTG CGTGTGTGTG TGTGTGTGTG
TGTTAGATAT TGAGCGGAAA CAAACCTAAG GAGAGAAATG GGTATTCACG
AAGAGATTGC GCGGGCCTTG AGGTGGGCAG GGGCCGAGTG AGGGTG
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wmc(24b4)
Plate reference : 24b4
WMC locus number : WMC Length of sequence : 195
Last updated : Ven 13 Nov 1998 at 13:27
Owner : ITCF Date at Agrogene : 29.10.98 Public Domain : Yes
Comments : Trimmed to insert at both ends. Bases 14 to 58 show homology to 2d11 bases 13 to 57 (45 in longest run, maxScore = 48). (GT)4 25 to 32, (GT)5 47 to 56, (GT)6 68 to 79, (GT)5 82 to 91, (GA)6 92 to 103, (GA)5 105 to 114, (GT)6 129 to 140, (GA)7 141 to 154. Too difficult to make primer.
PCR Comments :
Length of sequence : 195 Consensus sequence is :
..
GAACAAATGC TCCGCCTAGA GCATGTGTGT GTGAGATGGA GTCTTAGTGT
GTGTGTGGGG TGTGTATGTG TGTGTGTGTC TGTGTGTGTG TGAGAGAGAG
AGAGGAGAGA GAGATGGATT CTTAGTTTGT GTGTGTGTGT GAGAGAGAGA
GAGATGGAGT CTTAGTGTGT GTGGGGGGGT GTGCGTACAT GCGTG
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wmc434(24c4)
Plate reference : 24c4
WMC locus number : WMC434 Length of sequence : 387
Last updated : Ven 13 Nov 1998 at 13:36
Owner : ITCF Date at Agrogene : 29.10.98 Public Domain : Yes
Comments : Trimmed to Ssp1 at 5' end and to insert at 3' end. Bases 79 to 107 show homology to 2e8 bases 345 to 373 (29 in longest run, maxScore = 53). (GT)12 330 to 353.
PCR Comments : 61C anneal, stuttery smear.
Forward primer details :
ggAgccTgATTAggcTggAc at 195 length 20 bases, Tm 63
Reverse primer details :
AgccAAAcAgccAAcAgAgT at 356 length 20 bases, Tm 62
Expected size of amplified fragment (Chinese Spring=) 181 bases.
Length of sequence : 387 Consensus sequence is :
..
AATATTCACA ACAAGCTCGT TATTCAGAAA GTGCGTCTGG GACATGCGAC
TGACGCGGTC TTCAAAATGT GTGGCTATTT GCAGCTTTGG CGGCCGCTTA
GCCGCCCCGA GGACCGAACC GTCATCGACA CCCTCCTCAC CGACCTTCGA
TCGATGGCCT TCCGCATGGC GCCCCCGCTT CCGCCACCGC CGCCGGAGCC
TGATTAGGCT GGACTCGTCC GTGGCGGTCT TTGTGTGTGT CCTCTTGTTC
TTAGGGCTTG TTGAGTTGTG CCCTCAGCAT TAACCCTACT GGTACCATGC
GGTGTGTGCG GCTATGACTT TGAGTGTTTG TGTGTGTGTG TGTGTGTGTG
TGTGAACTCT GTTGGCTGTT TGGCTCGGGC GGTTTGC
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wmc(24d4)
Plate reference : 24d4
WMC locus number : WMC Length of sequence : 196
Last updated : Ven 13 Nov 1998 at 13:37
Owner : ITCF Date at Agrogene : 29.10.98 Public Domain : Yes
Comments : Trimmed to insert at both ends. Bases 1 to 196 show homology to 24a4 bases 1 to 196 (196 in longest run, maxScore = 127). (GT)11 82 to 103. Duplicate, 24a4 has precedence.
PCR Comments :
Length of sequence : 196 Consensus sequence is :
..
GGATGAATTG TATGCTCGGG GGAGTGTGTG TGTGTGTTGT GCTGCGTGCG
TGCATGTGTG TGTGTGTGTA TGTGTGCGTG CGTGTGTGTG TGTGTGTGTG
TGTTAGATAT TGAGCGGAAA CAAACCTAAG GAGAGAAATG GGTATTCACG
AAGAGATTGC GCGGGCCTTG AGGTGGGCAG GGGCCGAGTG AGGGTG
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wmc(24e4)
Plate reference : 24e4
WMC locus number : WMC Length of sequence : 241
Last updated : Jeu 29 Oct 1998 at 16:51
Owner : ITCF Date at Agrogene : 29.10.98 Public Domain : Yes
Comments : Trimmed to insert at both ends. No substantial microsatellite.
PCR Comments :
Length of sequence : 241 Consensus sequence is :
..
CGGGTGAAGG CCGACGATGC CGACGTTGGA GCAGGGTAGC AACGTTGCCT
AACCTCCCTG CATGACGTCG GGAAGGGCGA CAGCAGCGGC GGCTAGCTGG
ACAAGAGGCG GCGGGGGCTG TACACACAAG GCGGCGGCGG CGAAACCTAG
CAGACGCGCG AAGCAACGAT GCGTCGGGAT AGATGAGCGA TGCCTGGGCA
GGGGTTATAT TTTTTGCGGG TGGCATTTCT CTTGGAATAA C
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wmc435(24f4)
Plate reference : 24f4
WMC locus number : WMC435 Length of sequence : 168
Last updated : Ven 13 Nov 1998 at 13:47
Owner : ITCF Date at Agrogene : 29.10.98 Public Domain : Yes
Comments : Trimmed to insert at both ends. Bases 66 to 135 (complement) show homology to 5a4 bases 30 to 99 (70 in longest run, maxScore = 91) Homology on one side of microsatellite, forward primer has no homology to 5a4, reverse primer has a single mismatch. (GT)10 35 to 54,
PCR Comments : 51C anneal, smear.
Forward primer details :
gcAcTATAcTTATTggATTgTcA at 4 length 23 bases, Tm 55
Reverse primer details :
cATggTATcccTAgTAAgTTTTT at 127 length 23 bases, Tm 55
Expected size of amplified fragment (Chinese Spring=) 146 bases.
Length of sequence : 168 Consensus sequence is :
..
GATGCACTAT ACTTATTGGA TTGTCACTGT GTTCGTGTGT GTGTGTGTGT
GTGTGGTCAT ATGCCTGATA CATACAAAGT TTTCTCACCT CCATATTGTT
CATCTTTTAA ATTTGAATTT GCATTGAAAA ACTTACTAGG GATACCATGA
AATGTGAAAT CCATGTTG
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wmc436(24g4)
Plate reference : 24g4
WMC locus number : WMC436 Length of sequence : 156
Last updated : Ven 13 Nov 1998 at 13:54
Owner : ITCF Date at Agrogene : 29.10.98 Public Domain : Yes
Comments : Trimmed to insert at 5' end and to Ssp1 at 3' end. (CA)12 36 to 59.
PCR Comments : 51C anneal, polymorphic on acrylamide.
Forward primer details :
AATTggTAAgAcAcAcAgAAAc at 11 length 22 bases, Tm 55
Reverse primer details :
TgcgTATgcATTcTATAgTAAA at 129 length 22 bases, Tm 55
Expected size of amplified fragment (Chinese Spring=) 140 bases.
Length of sequence : 156 Consensus sequence is :
..
CACACATATT AATTGGTAAG ACACACAGAA ACACGCACAC ACACACACAC
ACACACACAT CGTGCACATC CACTAAAATC ATGAGAAATG TTGCGAACAC
ATGAGATTAC TAATGTCTAG GAACACACTT TACTATAGAA TGCATACGCA
AATATT
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wmc(24h4)
Plate reference : 24h4
WMC locus number : WMC Length of sequence : 371
Last updated : Lun 2 Nov 1998 at 10:05
Owner : ITCF Date at Agrogene : 29.10.98 Public Domain : Yes
Comments : Trimmed to insert at both ends. Bases 293 to 324 (complement) show homology to 5e6 bases 48 to 79 (32 in longest run, maxScore = 184). No substantial microsatellite.
PCR Comments :
Length of sequence : 371 Consensus sequence is :
..
GGAGCCAGGT GTGGTGAGCT CGGCTATGGT GCGGGAGGAC CACGAGGCTT
GGGAGCGCCT CGAGGCCGAG GCCGCCGACG AGGCCTACAT GCAAGAGCTC
CGCCGGTAGC ACCCGGAGCT CGTGGAGGCG AAGCGGGCGA TCTTTGCCGG
CGCGGAGGGC GGCAAGATTA TCATGCTCTC CTTTGATGAT AAGGTCGAAG
GCGGCAAGGA CGGCGGCATG GAGGGCGGCG AGGTTATCGA GCTCTCCTCT
GATGAGGAGG TCGAAGGCGG CGGCGACAGC GGCGCGATGG GTGTCGAGGT
GGGCCCCGAG GACGAGGAGA TCGATGTCGA CGAGTGGAGG AGTGCCTTCC
CCAACGACCC CAACGATGGT A
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wmc(24a5)
Plate reference : 24a5
WMC locus number : WMC Length of sequence : 175
Last updated : Ven 13 Nov 1998 at 14:22
Owner : ITCF Date at Agrogene : 29.10.98 Public Domain : Yes
Comments : Trimmed to insert at both ends. Bases 23 to 54 (complement) show homology to 5c12 bases 173 to 204 (32 in longest run, maxScore = 35). Bases 1 to 175 show homology to 24b6 bases 1 to 175 (175 in longest run, maxScore = 66), duplicate, 24a5 has priority. (TTG)10 25 to 54, (TTG)6 58 to 75, (TTG)7 79 to 99, (TTG)6 145 to 162. No room for primer.
PCR Comments :
Length of sequence : 175 Consensus sequence is :
..
CTGCTGCTGT TGGTGTTGGT GGTGTTGTTG TTGTTGTTGT TGTTGTTGTT
GTTGTTCTTG TTGTTGTTGT TGTTGTTCTT GTTGTTGTTG TTGTTGTTGC
TGTTGCTATT GCTGTTGTTG TTGCTGTTGC TGTTGCTGTT GCTGTTGTTG
TTGTTGTTGT TGCTGCTGCT GCTGC
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wmc437(24b5)
Plate reference : 24b5
WMC locus number : WMC437 Length of sequence : 408
Last updated : Ven 13 Nov 1998 at 14:07
Owner : ITCF Date at Agrogene : 29.10.98 Public Domain : Yes
Comments : Trimmed to insert at both ends. Bases 153 to 180 show homology to 11f8 bases 28 to 55 (28 in longest run, maxScore = 38). (GT)19 211 to 248.
PCR Comments : 61C anneal, polymorphic on acrylamide;
Forward primer details :
ATAgAggTTgTAcggccAAggT at 117 length 22 bases, Tm 63
Reverse primer details :
AgTgTgAAgTAgcAgTcTATcccc at 253 length 24 bases, Tm 62
Expected size of amplified fragment (Chinese Spring=) 160 bases.
Length of sequence : 408 Consensus sequence is :
..
GTTTGGGCCA CATGCAGGCG GTGGTTATCT TCGGGAACTA GCTACTTGCG
TGATTATTGG CAAGCTATCC CATCTCTAGG GTCGCGTGGA TGTCCATCAC
TTTGACTAAC AACAAGATAG AGGTTGTACG GCCAAGGTGG ATTCTTCTTG
GTCCGTTTTA CGATACATCT TGGTGAGATG CCCTCTCCCG CCGACTGAAA
GTGTGTGTGC GTGTGTGTGT GTGTGTGTGT GTGTGTGTGT GTGTGTGTTT
GAGGGGATAG ACTGCTACTT CACACTTTGA TATAGGTGAA CCTCCGTGGG
GTCGGCGATG TCCGGTTAAT TTGCGAGGCA TGTGCTGCAT CAAAGTTGTG
AATTGGGTAT TTAAATATCA CACCACCTTT TTCATACATA TAGTTGGGCT
ACCCGCAG
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wmc(24c5)
Plate reference : 24c5
WMC locus number : WMC Length of sequence : 116
Last updated : Ven 13 Nov 1998 at 14:10
Owner : ITCF Date at Agrogene : 29.10.98 Public Domain : Yes
Comments : Trimmed to insert at both ends. (GT)5 1 to 10, (GT)9 12 to 29. No room for primer.
PCR Comments :
Length of sequence : 116 Consensus sequence is :
..
GTGTGTGTGT AGTGTGTGTG TGTGTGTGTA TGTATGTGTG TCTGTGTGTG
TGTAGTGTGC GTGTGTGTGC ATGTATGAAG CGGGCCGGGC GCGTACGGGC
GGGCGGCGGC GACGGG
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wmc(24d5)
Plate reference : 24d5
WMC locus number : WMC Length of sequence : 152
Last updated : Ven 13 Nov 1998 at 14:10
Owner : ITCF Date at Agrogene : 29.10.98 Public Domain : Yes
Comments : Trimmed to insert at both ends. No substantial microsatellite.
PCR Comments :
Length of sequence : 152 Consensus sequence is :
..
CGCTGCGAGG AGCGGAGAGG CCGCAGGAGG AGGAGCCGAG GGAGGAGCCG
ATCAACATCC GGATCGAGGA CGTGGATTAG GAGTAGGGTT AGGCTTCCAA
TTGGTTCCGA TTGGTTCGTT TCAAGGCGGC GGCGGCGGTT TACTTTTCTT
CA
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wmc(24e5)
Plate reference : 24e5
WMC locus number : WMC Length of sequence : 182
Last updated : Ven 13 Nov 1998 at 14:15
Owner : ITCF Date at Agrogene : 29.10.98 Public Domain : Yes
Comments : Bases 107 to 118 show homology to 8d3 bases 170 to 181 (12 in longest run, maxScore = 37). (GT)11 1 to 22, (GT)7 125 to 138. No room for primer.
PCR Comments :
Length of sequence : 182 Consensus sequence is :
..
GTGTGTGTGT GTGTGTGTGT GTTTGTCGAG GCCCCTAGTT GCATGCTAAC
CATCAATTCG CAACTAGGGG GGTGTTTGTC GAGGCCCCCG GTTGCATGCC
GACCATCGAC TCGCAACTCA GGGCGTGTGT GTGTGTGTCG AGGGTCCATA
GTTGCATGTC GATCATTGAC TCGCAACTAG GG
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