Wheat microsatellite WMC 25/06/01
wmc(20e8)
Plate reference : 20e8
WMC locus number : WMC Length of sequence : 274
Last updated : Lun 4 Jan 1999 at 15:46
Owner : Byrne, Colorado State Date at Agrogene : 8.12.98 Public Domain : Yes
Comments : Trimmed to insert at both ends. (CT)7 254 to 267. No room for primers.
PCR Comments :
Length of sequence : 274 Consensus sequence is :
..
CAGGGCACGG CGAGCTGCGG GCGGCCGGCG AGGAGGTGGA GGCGCGATGT
GGTGGCGCGG TGGAGAGGCG ACGCGAGGAG AGGAGGGGGA TACGAGCGAG
AGGAAGGAGA TGGGATCGAG AGGAGTCGAG GCAGGAGGCG GCGGAAGGGA
ACGAGGAGGA GGGATCGAGA GATGGGGATC GAGCTCTCTG GGGGCTAGGG
TTAGGAGCGG GGCGCGGCTG GGCCTTGGGC TTAGAGGCCG GCTGGGCTGC
AGGCTCTCTC TCTCTCTCCC TTCC
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wmc(20f8)
Plate reference : 20f8
WMC locus number : WMC Length of sequence : 255
Last updated : Lun 8 F思 1999 at 10:07
Owner : Byrne, Colorado State Date at Agrogene : 8.12.98 Public Domain : Yes
Comments : Trimmed to insert at both ends. Bases 78 to 225 show homology to 5b8 bases 266 to 413 (148 in longest run, maxScore = 115). (GT)13 2 to 27. Duplicate, 5b8 has precedence. Bases 118 to 199 show homology to 22g2 bases 134 to 215 (82 in longest run, maxScore = 101).
PCR Comments :
Length of sequence : 255 Consensus sequence is :
..
CGTGTGTGTG TGTGTGTGTG TGTGTGTTTG AAAGAGGAGT AGATAGATTA
TTATCAGGAT CGATGTGCCA CCTACTAAGC TCCTTCGGTG CCGGGTAGTG
TGTGTGTGTA TGTTTGAGAG AGAAGCCAGT CGATAGATTA GTATCAAGAT
CGAGGTGTCA CCCTACTCCT TCGGTGTTGG GAAGTGTGGG TGTGTGGGGA
GGGGGGCAGT GACACTCACA TATCTCTACT CTTATAAAAA ACAGAGTGGG
TGATG
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wmc505(20g8)
Plate reference : 20g8
WMC locus number : WMC505 Length of sequence : 196
Last updated : Lun 4 Jan 1999 at 16:05
Owner : Byrne, Colorado State Date at Agrogene : 8.12.98 Public Domain : Yes
Comments : No trimming done to sequence at Agrogene, ends not located. (CA)31 55 to 116.
PCR Comments : 61C anneal, polymorphic on acrylamide (several loci) .
Forward primer details :
AggggAggAAAAccTTgTAATc at 28 length 22 bases, Tm 61
Reverse primer details :
AcgAccTAcgTggTAgTTcTTg at 131 length 22 bases, Tm 60
Expected size of amplified fragment (Chinese Spring=) 125 bases.
Length of sequence : 196 Consensus sequence is :
..
GTGGACTAGT GGCAAACTGG AGTCCGAAGG GGAGGAAAAC CTTGTAATCG
GACTCACACA CACACACACA CACACACACA CACACACACA CACACACACA
CACACACACA CACACACTTG TCTTTAGAAG CAAGAACTAC CACGTAGGTC
GTAGGGTTTA CACCTTGTTG GTGACATGAA GTTGGATATA AAAAGC
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wmc(20h8)
Plate reference : 20h8
WMC locus number : WMC Length of sequence : 289
Last updated : Mar 22 D残 1998 at 9:42
Owner : Byrne, Colorado State Date at Agrogene : 8.12.98 Public Domain : Yes
Comments : Trimmed to insert at both ends. Bases 112 to 141 (complement) show homology to 5e6 bases 124 to 153 (30 in longest run, maxScore = 101). No substantial microsatellite.
PCR Comments :
Length of sequence : 289 Consensus sequence is :
..
GCTCTCCTCC GATGACGAGG TCGAAGGCGG CGAGGACGGC GGCGCAGACG
GCGGGCAAGA TTATCACGCT CTCCTCCGAT GACAAGGTCG AAGGCGGCAA
GGACGGCGGC GCGGAGGGCG GCGAGGTTAT CGCGCTCTCC TTCGATGACG
AGGTCGAAGG CGGCAAGGAC GGCAGCGAGG AGGGCGTCCA GGTGGGCGGC
GAGGACAAGG AGGTCAACGT CGACGAGTGG AGGAGTGCCT TCCCGAACGA
CCCCGATGAA GGCACCGGCC CAGACCCGGC TCGTGGCAC
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wmc(20a9)
Plate reference : 20a9
WMC locus number : WMC Length of sequence : 6
Last updated : Lun 21 D残 1998 at 16:26
Owner : Byrne, Colorado State Date at Agrogene : 8.12.98 Public Domain : Yes
Comments : No sequence 8.12.98.
PCR Comments :
No sequence available for this clone
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wmc(20b9)
Plate reference : 20b9
WMC locus number : WMC Length of sequence : 319
Last updated : Lun 8 F思 1999 at 10:07
Owner : Byrne, Colorado State Date at Agrogene : 8.12.98 Public Domain : Yes
Comments : Trimmed to insert at 5' end, 3' end not located. No substantial microsatellite. Bases 100 to 117 show homology to 22b2 bases 79 to 96 (complement) (18 in longest run, maxScore = 19).
PCR Comments :
Length of sequence : 319 Consensus sequence is :
..
CACGCTACCT CGCCGCCTTA TAAATACCCG AGGCCCGGCC CCGTATCTCT
CCTCGTTTCG CCCCGCGCCG CACTTTGCCG CGCCGCCACG CCGCATGCCG
CCACCCCTAG AGGGTTGAGC CGGTTCCCTA AACCTATTGT CTTACACTTG
GAACCTCACA NNCAATCANA CAAACAAGAA CCTCGCAGCT AACACAATAA
AGGGGTTGTC AATCCCTTCA CGGCCACTTG CGANAGTGAN ATCAGATNGA
GATAATATGA TAAGATAAAT TAATCCACGC GCCTCCAAGG GATCTCTAGA
NTCGACCTGC ANGCATGCA
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wmc(20c9)
Plate reference : 20c9
WMC locus number : WMC Length of sequence : 6
Last updated : Lun 21 D残 1998 at 16:26
Owner : Byrne, Colorado State Date at Agrogene : 8.12.98 Public Domain : Yes
Comments :
PCR Comments :
No sequence available for this clone
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wmc506(20d9)
Plate reference : 20d9
WMC locus number : WMC506 Length of sequence : 233
Last updated : Lun 4 Jan 1999 at 16:17
Owner : Byrne, Colorado State Date at Agrogene : 8.12.98 Public Domain : Yes
Comments : Trimmed to Ssp1 at 5' end and to insert at 3' end. (GA)5 85 to 94, (GA)24 105 to 152.
PCR Comments : 61C anneal, polymorphic on acrylamide.
Forward primer details :
cAcTTccTcAAcATgccAgA at 12 length 20 bases, Tm 62
Reverse primer details :
cTTTcAATgTggAAggcgAc at 208 length 20 bases, Tm 62
Expected size of amplified fragment (Chinese Spring=) 216 bases.
Length of sequence : 233 Consensus sequence is :
..
AATATTTCAA GCACTTCCTC AACATGCCAG ACCGAGGATG AACGGCCAGG
GATCAGGGCC TCCTTCTCAA TCCACCTCCT TGGCGAGAGA GAGATAGAGA
GATAGAGAGA GAGAGAGAGA GAGAGAGAGA GAGAGAGAGA GAGAGAGAGA
GAAGGGGCCG ATCCGATCAG CCGAGACATC GATATTTTGC TAGACTCGCC
ACGCATCGTC GCCTTCCACA TTGAAAGGCC GCC
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wmc(20e9)
Plate reference : 20e9
WMC locus number : WMC Length of sequence : 415
Last updated : Mar 22 D残 1998 at 9:42
Owner : Byrne, Colorado State Date at Agrogene : 8.12.98 Public Domain : Yes
Comments : Trimmed to insert at 5' end, 3' end not located. Bases 143 to 156 (complement) show homology to 24e1 bases 128 to 141 (14 in longest run, maxScore = 21). No substantial microsatellite.
PCR Comments :
Length of sequence : 415 Consensus sequence is :
..
gGCCGCCGCC ACCACCACCG CTGTTGTTGT AgGAGTTGTA GTGGGCCGCC
ACCGCCACCA TTGTTGGAGT TGTAGTAATA GTTGCTGCCG CCGCCAcCAC
CACCGCCATT GTTTCCACGG GATTCGCCAC CGCTACCGCT TCTGTTGGAG
TTGTTGCAGT AACGACTGGG GTTGTTGTTG CCGTGGCCTC GAGATGCAAC
ATTGGCGGAT GATTTGAAAG CACCTGCCCC TGTTCCGTGG AACATCTCAA
TGCGCTGGTC NAAATTGGCG ACCATGCCAA AAGAGATNAT CCACCGATGA
GGGGGTCAAG TGCATACGTC CAANCGCCGG AATCAAGGGC TGGTAATCCA
TATCNAACCC TGCAATTAGT CCANGCGCCT CCAAGGGATC CTCTAGAATC
NACCTGCATG CATGC
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wmc(20f9)
Plate reference : 20f9
WMC locus number : WMC Length of sequence : 150
Last updated : Lun 4 Jan 1999 at 16:20
Owner : Byrne, Colorado State Date at Agrogene : 8.12.98 Public Domain : Yes
Comments : Trimmed to insert at 5' end, 3' end not located. Bases 48 to 68 (complement) show homology to 19g6 bases 218 to 238 (21 in longest run, maxScore = 35). (GA)8 5 to 20, (GT)15 83 to 112. No room for primers.
PCR Comments :
Length of sequence : 150 Consensus sequence is :
..
GTGTGAGAGA GAGAGAGAGA AGCAGTGGGA TAGATTACTA TCAAGACCGA
GGTGCCANCC TGCTCCTTCA TTGTCGGGTA ATGTGTGTGT GTGTGTGTGT
GTGTGTGTGT GTTTGAGAGA GAAACCACTA GATGGATTAA TATCAAGATC
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wmc507(20g9)
Plate reference : 20g9
WMC locus number : WMC507 Length of sequence : 344
Last updated : Lun 4 Jan 1999 at 16:29
Owner : Byrne, Colorado State Date at Agrogene : 8.12.98 Public Domain : Yes
Comments : Trimmed to insert at 5' end, 3' end not located. Bases 240 to 258 (complement) show homology to 17e12 bases 296 to 314 (19 in longest run, maxScore = 38), primers outdie this region of homology. (CA)5 3 to 12, (CA)24 64 to 111.
PCR Comments : 51C anneal, product.
Forward primer details :
AcAccccTAgTTgcgAAgT at 10 length 19 bases, Tm 59
Reverse primer details :
gcAAgTTggAcATcgAATc at 119 length 19 bases, Tm 59
Expected size of amplified fragment (Chinese Spring=) 128 bases.
Length of sequence : 344 Consensus sequence is :
..
GACACACACA CACCCCTAGT TGCGAAGTCG ATGTTCGGCC TGCAACTGGG
GACCCTCGAC AAACACACAC ACACACACAC ACACACACAC ACACACACAC
ACACACACAC ATAGTTGTGA TTCGATGTCC AACTTGCATN TCGCGACCCT
CGACAAACAC ATACACACCC CTAAATGTGA GTCAATGGTC GGCATGCAAC
TGGGGAaCCT CGACAAACAC AcACTCCCCT ANTTGCCAAT CNATGGTTGA
CATGCAACTT GGGGNAACGN TTAACACACA CTCCCTTAAT CCACGCGCCT
CNAGGGATTC TCTAAANTCN ACCTGCANGN ATGCAANCTT GGNG
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wmc(20h9)
Plate reference : 20h9
WMC locus number : WMC Length of sequence : 103
Last updated : Lun 4 Jan 1999 at 16:32
Owner : Byrne, Colorado State Date at Agrogene : 8.12.98 Public Domain : Yes
Comments : No trimming done to sequence at Agrogene, ends not located. Bases 74 to 89 show homology to 24c2 bases 66 to 81 (16 in longest run, maxScore = 24). (CT)9 26 to 43, (CT)8 45 to 60. Too difficult to make primers.
PCR Comments :
Length of sequence : 103 Consensus sequence is :
..
TGTGTACAGT AGCTATGTGT TTGATCTCTC TCTCTCTCTC TCTCCTCTCT
CTCTCTCTCt GGtTCTTGAC CTAGCACGAT CTTGATGTAC AACGAGCTTT
GTT
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wmc(20a10)
Plate reference : 20a10
WMC locus number : WMC Length of sequence : 117
Last updated : Lun 4 Jan 1999 at 16:37
Owner : Byrne, Colorado State Date at Agrogene : 8.12.98 Public Domain : Yes
Comments : Trimmed to insert at 3' end, 5' end not located. Bases 18 to 55 show homology to 21h2 bases 75 to 112 (38 in longest run, maxScore = 20). (GT)10 95 to 114, Bases 18 to 55 show homology to 21h2 bases 75 to 112 (38 in longest run, maxScore = 20). No room for primers.
PCR Comments :
Length of sequence : 117 Consensus sequence is :
..
AGAGAGAGAG TGAGTNAGAG ANAGAGGAGA GAGAGAGATG GAGTCTTAGT
TTGTGCGTGA GAGAGAGAGA GATGGAGTCT AAGTGTGTGT GTGGGTGTGT
GTGTGTGTGT GTGTTTG
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wmc(20b10)
Plate reference : 20b10
WMC locus number : WMC Length of sequence : 278
Last updated : Lun 4 Jan 1999 at 16:37
Owner : Byrne, Colorado State Date at Agrogene : 8.12.98 Public Domain : Yes
Comments : Trimmed to Ssp1 at 3' end, 5' end not located. Bases 96 to 135 (complement) show homology to 8a4 bases 54 to 93 (40 in longest run, maxScore = 49). (GA)9 25 to 42, (GA)8 59 to 74, (GA)9 77 to 94, (GA)13 165 to 190. Duplicate, 8a4 has precedence.
PCR Comments :
Length of sequence : 278 Consensus sequence is :
..
GTGCGACAGA ACTGAAGATT GTCAGAGAGA GAGAGAGAGA GACAGAGAGA
GAGAGACAGA GAGAGAGAGA GAGACAGAGA GAGAGAGAGA GAGATAGAGA
TGGAGGGAGA GGGACCAACA AGGTTTGTGT GTTGGTTGCG TGCGACAGAA
CTGAAGGTTG TCAAGAGAGA GAGAGAGAGA GAGAGAGAGA AAGAGAGAGA
GAGATAGAGA GAGACAGAGA GAGAGAGAGA GGGACCAACA AGTTTGTGTG
TTGGATGCGT GCGACAGAAC TGAATAAT
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wmc(20c10)
Plate reference : 20c10
WMC locus number : WMC Length of sequence : 6
Last updated : Lun 21 D残 1998 at 16:27
Owner : Byrne, Colorado State Date at Agrogene : 8.12.98 Public Domain : Yes
Comments : No sequence 8.12.98.
PCR Comments :
No sequence available for this clone
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wmc(20d10)
Plate reference : 20d10
WMC locus number : WMC Length of sequence : 148
Last updated : Lun 4 Jan 1999 at 16:39
Owner : Byrne, Colorado State Date at Agrogene : 8.12.98 Public Domain : Yes
Comments : Trimmed to insert at 5' end and to Ssp1 at 3' end. Bases 128 to 148 show homology to 25d4 bases 151 to 171 (21 in longest run, maxScore = 26). (CA)6 4 to 15, (CA)12 21 to 44. No room for primers.
PCR Comments :
Length of sequence : 148 Consensus sequence is :
..
GTCCACACAC ACACACTAGA CACACACACA CACACACACA CACACTAAGA
CACACACACA CTACACATAT TAGTTTGTTA TAAATTTTTC TGTTTTTTAA
GTTATAGAAA TGTTAGAAAT TATTCtATTT TTTAGTTATA TAAATATT
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wmc508(20e10)
Plate reference : 20e10
WMC locus number : WMC508 Length of sequence : 306
Last updated : Lun 4 Jan 1999 at 17:07
Owner : Byrne, Colorado State Date at Agrogene : 8.12.98 Public Domain : Yes
Comments : Trimmed to insert at 3' end, 5' end not located. Bases 123 to 194 show homology to 8h11 bases 116 to 187 (72 in longest run, maxScore = 63), reverse primer is outside this region of homology, forward primer matches 8h11. (GA)6 83 to 94.
PCR Comments : 61C anneal, product.
Forward primer details :
AgcccTTgAgTTggTcTcATTT at 53 length 22 bases, Tm 63
Reverse primer details :
gAgcAgAgcTccAcTcAcATTT at 210 length 22 bases, Tm 63
Expected size of amplified fragment (Chinese Spring=) 179 bases.
Length of sequence : 306 Consensus sequence is :
..
CTCGAGGCGN TGGTGCTCAT CAAGTTTTTT ATAAATAAAT GCCAACAAGA
ATAGCCCTTG AGTTGGTCTC ATTTTTTTGT GTGAGAGAGA GAGATGAAGC
TAGCAGCCAA GCATGTGAAG ATCCAGTGAT GATGGGAAGA GGAAACTACC
GGGAAGGAGC GCGCATACCA TCTTTAGCGA TGGGAGGGAT GTGTACTTCC
GTTGCAAGGA AATGTGAGTG GAGCTCTGCT CAGCACACAC GGGACATGGT
AGTAAAAAGA TAGCTAGCTC ATTTTAGTTG CACGCTCAAT TTCAACTAGT
AGTTTG
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wmc(20f10)
Plate reference : 20f10
WMC locus number : WMC Length of sequence : 6
Last updated : Lun 21 D残 1998 at 16:27
Owner : Byrne, Colorado State Date at Agrogene : 8.12.98 Public Domain : Yes
Comments : No sequence 8.12.98.
PCR Comments :
No sequence available for this clone
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wmc(20g10)
Plate reference : 20g10
WMC locus number : WMC Length of sequence : 155
Last updated : Lun 4 Jan 1999 at 17:11
Owner : Byrne, Colorado State Date at Agrogene : 8.12.98 Public Domain : Yes
Comments : Trimmed to insert at both ends. Bases 37 to 69 (complement) show homology to 22g11 bases 185 to 217 (33 in longest run, maxScore = 44). Bases 37 to 69 (complement) show homology to 22g11 bases 185 to 217 (33 in longest run, maxScore = 44). (GT)6 25 to 36, (GT)11 38 to 59, (GT)5 116 to 125. Too difficult to make primers.
PCR Comments :
Length of sequence : 155 Consensus sequence is :
..
ATGAATTGTG TGATCGGGGG AGGGGTGTGT GTGTGTTGTG TGTGTGTGTG
TGTGTGTGTG CGTGTGTGTT TGTGTGTGTG TCAGATATCG AGAGAAAACA
AACCTAAGGA GAGAAGTGTG TGTGTATGAG ACAGAAAGCT ACATGCTAAA
CAGGG
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wmc(20h10)
Plate reference : 20h10
WMC locus number : WMC Length of sequence : 141
Last updated : Lun 4 Jan 1999 at 17:13
Owner : Byrne, Colorado State Date at Agrogene : 8.12.98 Public Domain : Yes
Comments : Trimmed to insert at both ends. Bases 64 to 104 show homology to 5a2 bases 27 to 67 (41 in longest run, maxScore = 35). (CT)18 59 to 94, Bases 64 to 104 show homology to 5a2 bases 27 to 67 (41 in longest run, maxScore = 35). Duplicate, 5a2 has precedence.
PCR Comments :
Length of sequence : 141 Consensus sequence is :
..
CGAGGAGGGA GTACTCTCCC TCGGGGCTGA GGGATGTACC AATAGCTATG
TGTTTGATCT CTCTCTCTCT CTCTCTCTCT CTCTCTCTCT CTCTCGTGTT
CTTGTGGTGG TACGATCTTG ATGTATCGCG AGCTTTGCTA T
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wmc(20a11)
Plate reference : 20a11
WMC locus number : WMC Length of sequence : 6
Last updated : Lun 21 D残 1998 at 16:27
Owner : Byrne, Colorado State Date at Agrogene : 8.12.98 Public Domain : Yes
Comments : No sequence 8.12.98.
PCR Comments :
No sequence available for this clone
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wmc(20b11)
Plate reference : 20b11
WMC locus number : WMC Length of sequence : 6
Last updated : Lun 21 D残 1998 at 16:27
Owner : Byrne, Colorado State Date at Agrogene : 8.12.98 Public Domain : Yes
Comments : No sequence 8.12.98.
PCR Comments :
No sequence available for this clone
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wmc(20c11)
Plate reference : 20c11
WMC locus number : WMC Length of sequence : 198
Last updated : Lun 4 Jan 1999 at 17:15
Owner : Byrne, Colorado State Date at Agrogene : 8.12.98 Public Domain : Yes
Comments : Trimmed to insert at 5' end and to Ssp1 at 3' end. Bases 1 to 29 (complement) show homology to 4f1 bases 32 to 60 (29 in longest run, maxScore = 28). (CA)16 152 to 183. No room for primers.
PCR Comments :
Length of sequence : 198 Consensus sequence is :
..
CAAGCTTGCA TGCCTGCAGG TCGACTCTAA GAGGATTCCT CGAGGCGCGT
GGGACTACGG AACGTAAAAA TTACGGTGCA TTAATGGGTA AAATAGAAGG
GGTGAAGAAT AACTATTGCT CAACCAAgGG TGACGAATAG CGCGACCTAT
ACACACACAC ACACACACAC ACACACACAC ACATACACAC ACACACAC
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wmc(20d11)
Plate reference : 20d11
WMC locus number : WMC Length of sequence : 330
Last updated : Lun 21 D残 1998 at 16:27
Owner : Byrne, Colorado State Date at Agrogene : 8.12.98 Public Domain : Yes
Comments : Trimmed to insert at both ends. No substantial microsatellite.
PCR Comments :
Length of sequence : 330 Consensus sequence is :
..
AGGTGGCGCC CCCCGCCAGC ACAAATAGAC ACGAGGCCAC TAGCAGCCGT
CTGCCGTTTG ACGGGAAAGA CGAAATTGAC CATAATATGT AGTCAAGAGA
GATCACTGGA AGTTCACCCC GCGCCGCCCG CCGTCGTCAA GGAGCTGGAG
CTGGAAGATC CAAATCCTTA TCTCGGCCAG CAAGCACCAC CACATCCAGA
TCTCATGAAG CCGCCATGCT ACCAGCTGGT GCCCAGTCCG TCATAGTGCC
GCCAACACAG GTCACCACCG CCAACACAAA ACGCCTGATG TCGCGCCGCT
GCCCCATGCA AGCACACCGC CGCCGCGTGC
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wmc(20e11)
Plate reference : 20e11
WMC locus number : WMC Length of sequence : 185
Last updated : Lun 4 Jan 1999 at 17:19
Owner : Byrne, Colorado State Date at Agrogene : 8.12.98 Public Domain : Yes
Comments : Trimmed to insert at 3' end, 5' end not located. Bases 140 to 158 (complement) show homology to 12d12 bases 75 to 93 (19 in longest run, maxScore = 46). (GT)9 32 to 49. Too difficult to make primers.
PCR Comments :
Length of sequence : 185 Consensus sequence is :
..
CCTCGAGGCG CGTGCGTGCA TGCGTGCGTG CGTGTGTGTG TGTGTGTGTC
CAAGGTCCTC TATGGCGGAT GTAAtTTAAG TGCGCATGGc TTCATCAATA
GAGAAGTGAT CTGTATGGTA AAAGGCAACA ACGATGGGAT GCGAGAGAGA
AAATGCCCGT agAGAAGGAA GAGAAAGTGT GTGCG
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wmc(20f11)
Plate reference : 20f11
WMC locus number : WMC Length of sequence : 6
Last updated : Lun 21 D残 1998 at 16:27
Owner : Byrne, Colorado State Date at Agrogene : 8.12.98 Public Domain : Yes
Comments : No sequence 8.12.98.
PCR Comments :
No sequence available for this clone
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wmc(20g11)
Plate reference : 20g11
WMC locus number : WMC Length of sequence : 6
Last updated : Lun 21 D残 1998 at 16:27
Owner : Byrne, Colorado State Date at Agrogene : 8.12.98 Public Domain : Yes
Comments : No sequence 8.12.98.
PCR Comments :
No sequence available for this clone
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wmc(20h11)
Plate reference : 20h11
WMC locus number : WMC Length of sequence : 6
Last updated : Lun 21 D残 1998 at 16:27
Owner : Byrne, Colorado State Date at Agrogene : 8.12.98 Public Domain : Yes
Comments : No sequence 8.12.98.
PCR Comments :
No sequence available for this clone
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wmc(20a12)
Plate reference : 20a12
WMC locus number : WMC Length of sequence : 6
Last updated : Lun 21 D残 1998 at 16:27
Owner : Byrne, Colorado State Date at Agrogene : 8.12.98 Public Domain : Yes
Comments : No sequence 8.12.98.
PCR Comments :
No sequence available for this clone
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wmc(20b12)
Plate reference : 20b12
WMC locus number : WMC Length of sequence : 240
Last updated : Mar 22 D残 1998 at 9:42
Owner : Byrne, Colorado State Date at Agrogene : 8.12.98 Public Domain : Yes
Comments : No trimming done to sequence at Agrogene, ends not located. Bases 221 to 240 show homology to 12a5 bases 216 to 235 (20 in longest run, maxScore = 21). No substantial microsatellite.
PCR Comments :
Length of sequence : 240 Consensus sequence is :
..
GGGACTACAT CATCTTCTTC TTCACTTATC CACCGAGTAT AGCCATCCAT
GAAACCATTC ATCAAGCAGG TGCGCCTTTA AAGTGCCACG ATCAAAAGGG
TCCAAAAGGA CTCCTTCTTT GCATCTTGCA CACGAACATC TAATCCTAGT
CCAATTATTT GCATACATGT CCATCACCGT GGATTGCATG TATCGCTCCA
ACTCGAAGGG ATTCTCTAAA AGTCGACCTG CAgGCATGCA
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wmc(20c12)
Plate reference : 20c12
WMC locus number : WMC Length of sequence : 6
Last updated : Lun 21 D残 1998 at 16:27
Owner : Byrne, Colorado State Date at Agrogene : 8.12.98 Public Domain : Yes
Comments : No sequence 8.12.98.
PCR Comments :
No sequence available for this clone
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wmc(20d12)
Plate reference : 20d12
WMC locus number : WMC Length of sequence : 6
Last updated : Lun 21 D残 1998 at 16:27
Owner : Byrne, Colorado State Date at Agrogene : 8.12.98 Public Domain : Yes
Comments : No sequence 8.12.98.
PCR Comments :
No sequence available for this clone
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wmc(20e12)
Plate reference : 20e12
WMC locus number : WMC Length of sequence : 6
Last updated : Lun 21 D残 1998 at 16:27
Owner : Byrne, Colorado State Date at Agrogene : 8.12.98 Public Domain : Yes
Comments : No sequence 8.12.98.
PCR Comments :
No sequence available for this clone
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wmc(20f12)
Plate reference : 20f12
WMC locus number : WMC Length of sequence : 6
Last updated : Lun 21 D残 1998 at 16:27
Owner : Byrne, Colorado State Date at Agrogene : 8.12.98 Public Domain : Yes
Comments : No sequence 8.12.98.
PCR Comments :
No sequence available for this clone
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wmc(20g12)
Plate reference : 20g12
WMC locus number : WMC Length of sequence : 6
Last updated : Lun 21 D残 1998 at 16:27
Owner : Byrne, Colorado State Date at Agrogene : 8.12.98 Public Domain : Yes
Comments : No sequence 8.12.98.
PCR Comments :
No sequence available for this clone
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wmc(20h12)
Plate reference : 20h12
WMC locus number : WMC Length of sequence : 372
Last updated : Lun 8 F思 1999 at 10:07
Owner : Byrne, Colorado State Date at Agrogene : 8.12.98 Public Domain : Yes
Comments : Trimmed to insert at 3' end, 5' end not located. Bases 313 to 334 show homology to 25c6 bases 409 to 430 (22 in longest run, maxScore = 48). (CA)10 35 to 54, (CA)5 107 to 126, (CA)5 232 to 241, (CA)4 299 to 306. Too difficult too make primers. Bases 295 to 342 show homology to 22f4 bases 247 to 294 (48 in longest run, maxScore = 76).
PCR Comments :
Length of sequence : 372 Consensus sequence is :
..
CTCGAGGCGC TGGACACACG CGCGCGCACG TGTGCACACA CACACACACA
CACACGCACA CACACACGCA GCAACACACA TTCACGTGCG CACACACGCA
CGCAGCACAC ACACACTTAC ACACACATGC AACAGCAGCA CACACGCAGG
CATCACATAg GCACACAACG GCACACACAC GCGCGCGCAT GTACACACGC
AGTAGCAAAC ATAGACGCAA CGACACACAT GCACACACAC ATGTAGCAGC
AGCACACATG TGCGCGTGCA CCCACACACG CAGCAACACA CACACGCGCA
CACACATACC GCATGAGGGG CAAAATCGTC TTTTCAGGTG TCATTTAGGA
TCAAAATGAA CGGAAGTGTC GT
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wmc(20a5)
Plate reference : 20a5
WMC locus number : WMC Length of sequence : 6
Last updated : Lun 21 D残 1998 at 16:27
Owner : Byrne, Colorado State Date at Agrogene : 8.12.98 Public Domain : Yes
Comments : No sequence 8.12.98.
PCR Comments :
No sequence available for this clone
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wmc(20b5)
Plate reference : 20b5
WMC locus number : WMC Length of sequence : 6
Last updated : Lun 21 D残 1998 at 16:27
Owner : Byrne, Colorado State Date at Agrogene : 8.12.98 Public Domain : Yes
Comments : No sequence 8.12.98.
PCR Comments :
No sequence available for this clone
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wmc(20c5)
Plate reference : 20c5
WMC locus number : WMC Length of sequence : 6
Last updated : Lun 21 D残 1998 at 16:27
Owner : Byrne, Colorado State Date at Agrogene : 8.12.98 Public Domain : Yes
Comments : No sequence 8.12.98.
PCR Comments :
No sequence available for this clone
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wmc(20d5)
Plate reference : 20d5
WMC locus number : WMC Length of sequence : 6
Last updated : Lun 21 D残 1998 at 16:27
Owner : Byrne, Colorado State Date at Agrogene : 8.12.98 Public Domain : Yes
Comments : No sequence 8.12.98.
PCR Comments :
No sequence available for this clone
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wmc(20e5)
Plate reference : 20e5
WMC locus number : WMC Length of sequence : 6
Last updated : Lun 21 D残 1998 at 16:27
Owner : Byrne, Colorado State Date at Agrogene : 8.12.98 Public Domain : Yes
Comments : No sequence 8.12.98.
PCR Comments :
No sequence available for this clone
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wmc509(20f5)
Plate reference : 20f5
WMC locus number : WMC509 Length of sequence : 361
Last updated : Lun 4 Jan 1999 at 17:40
Owner : Byrne, Colorado State Date at Agrogene : 8.12.98 Public Domain : Yes
Comments : Trimmed to insert at 3' end, 5' end not located. Bases 154 to 184 show homology to 21a10 bases 126 to 156 (31 in longest run, maxScore = 36) Primers do not match 21a10. (CA)14 152 to 179.
PCR Comments : 61C anneal, product;
Forward primer details :
gTAccAAgTcggcATTATccAT at 86 length 22 bases, Tm 62
Reverse primer details :
ATcggTTTgTgTggAAATcTgT at 278 length 22 bases, Tm 62
Expected size of amplified fragment (Chinese Spring=) 214 bases.
Length of sequence : 361 Consensus sequence is :
..
GGACTACTAG TCTTTTACAC CCACACAATC ATCTTCCCTT TATAATTGTA
CCATTAACTT TCTCTCGTGC ATGCATGCAC AAACAGTACC AAGTCGGCAT
TATCCATCGC ACACATGCAA TCTTTTTCTT CAGGTCGGTC TCCCATGCAT
GCACACACAC ACACACACAC ACACACACAC CTCCCCCTCC CCATAATGTC
GGGCATTCTT TATCTCTCAC GTGCATGCAC AACGATCGAT GTTCCTCTAT
GTGTGTGTAT ATATAGCTAG GTCTTTCACA GATTTCCACA CAAACCGATC
AATCTATATA TCTAGTGAGG CCTCGCCCTC TTTCCCATGT CCACATCGAT
CAATCTATAC C
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wmc510(20g5)
Plate reference : 20g5
WMC locus number : WMC510 Length of sequence : 403
Last updated : Mar 5 Jan 1999 at 15:27
Owner : Byrne, Colorado State Date at Agrogene : 8.12.98 Public Domain : Yes
Comments : Trimmed to insert at 3' end, 5' end not located. Bases 275 to 296 (complement) show homology to 8h1 bases 1 to 22 (22 in longest run, maxScore = 52). Primers are outside this region of homology. (CA)4TA(CA)4 161 to 178, (CA)9 290 to 307.
PCR Comments : 61C anneal, product.
Forward primer details :
AcTAggggccTcgAcAAAcAT at 139 length 21 bases, Tm 64
Reverse primer details :
gTTTTcgAggcccccAgTA at 336 length 19 bases, Tm 64
Expected size of amplified fragment (Chinese Spring=) 216 bases.
Length of sequence : 403 Consensus sequence is :
..
TCGAGGCGCT GNACTAGTCG GGTTGCAACT AGGGACCTTC GACAAACACA
CACACCCTAG TTGCGAGTCA ATGCTTGACA TACAATTGGG GACCCTCGAC
ACACACACAC CTAGTTGCGA GTCGATGGTC GACATGCAAC TAGGGGCCTC
GACAAACATA CACACACATA CACACACACC CTAATTACGA TTCAATGGTC
GACATGAAAT TGGGGGCCCT CGACAAACAC ACACACACAC CCCTAGTTGC
GAGTAGATGG TCGGGTTGCA ACTAGGGACC CTCGACAAAC ACACACACAC
ACACACACCT AGTTGCGAGT CGATGGTCGA CATGCTACTG GGGGCCTCGA
AAACATACAC ACACACCCTA ATTGTGAGTC AATGGTCGAC ATGCAACTGG
GGG
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wmc(20h5)
Plate reference : 20h5
WMC locus number : WMC Length of sequence : 6
Last updated : Lun 21 D残 1998 at 16:27
Owner : Byrne, Colorado State Date at Agrogene : 8.12.98 Public Domain : Yes
Comments : No sequence 8.12.98.
PCR Comments :
Length of sequence : 6 Consensus sequence is :
..
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wmc(20a6)
Plate reference : 20a6
WMC locus number : WMC Length of sequence : 6
Last updated : Lun 21 D残 1998 at 16:27
Owner : Byrne, Colorado State Date at Agrogene : 8.12.98 Public Domain : Yes
Comments : No sequence 8.12.98.
PCR Comments :
No sequence available for this clone
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wmc(20b6)
Plate reference : 20b6
WMC locus number : WMC Length of sequence : 6
Last updated : Lun 21 D残 1998 at 16:27
Owner : Byrne, Colorado State Date at Agrogene : 8.12.98 Public Domain : Yes
Comments : No sequence 8.12.98.
PCR Comments :
No sequence available for this clone
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wmc(20c6)
Plate reference : 20c6
WMC locus number : WMC Length of sequence : 6
Last updated : Lun 21 D残 1998 at 16:27
Owner : Byrne, Colorado State Date at Agrogene : 8.12.98 Public Domain : Yes
Comments : No sequence 8.12.98.
PCR Comments :
No sequence available for this clone
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wmc(20d6)
Plate reference : 20d6
WMC locus number : WMC Length of sequence : 6
Last updated : Lun 21 D残 1998 at 16:27
Owner : Byrne, Colorado State Date at Agrogene : 8.12.98 Public Domain : Yes
Comments : No sequence 8.12.98.
PCR Comments :
No sequence available for this clone
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wmc(20e6)
Plate reference : 20e6
WMC locus number : WMC Length of sequence : 6
Last updated : Lun 21 D残 1998 at 16:27
Owner : Byrne, Colorado State Date at Agrogene : 8.12.98 Public Domain : Yes
Comments : No sequence 8.12.98.
PCR Comments :
No sequence available for this clone
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wmc(20f6)
Plate reference : 20f6
WMC locus number : WMC Length of sequence : 6
Last updated : Lun 21 D残 1998 at 16:27
Owner : Byrne, Colorado State Date at Agrogene : 8.12.98 Public Domain : Yes
Comments : No sequence 8.12.98.
PCR Comments :
No sequence available for this clone
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