Wheat microsatellite WMC 25/06/01
wmc(20g6)
Plate reference : 20g6
WMC locus number : WMC Length of sequence : 6
Last updated : Lun 21 D残 1998 at 16:27
Owner : Byrne, Colorado State Date at Agrogene : 8.12.98 Public Domain : Yes
Comments : No sequence 8.12.98.
PCR Comments :
No sequence available for this clone
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wmc(20h6)
Plate reference : 20h6
WMC locus number : WMC Length of sequence : 232
Last updated : Lun 21 D残 1998 at 16:27
Owner : Byrne, Colorado State Date at Agrogene : 8.12.98 Public Domain : Yes
Comments : Trimmed to insert at 3' end, 5' end not located. No substantial microsatellite.
PCR Comments :
Length of sequence : 232 Consensus sequence is :
..
ACTATTGGGG GCANGACAAA ATATGGGCGG CGGCGGCGCG GCACGATTCA
GGGCGGTCGC GTTGGGCAGC CGGAAGAAGG GGCATCCGGT GTATGTCGGG
GGTGGTTAAT CAgGACgACA GAgGAGCGGC GTATGGGCGG CAgAGGAGTA
TTGGaGGAGC GGCgAgAAgA ACgACgAAgG CAgACGACCG TTGGGTAgGC
GGCGTGGCTC ACCTGCCCTA CCTCCGACGG TG
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wmc(20a7)
Plate reference : 20a7
WMC locus number : WMC Length of sequence : 6
Last updated : Lun 21 D残 1998 at 16:27
Owner : Byrne, Colorado State Date at Agrogene : 8.12.98 Public Domain : Yes
Comments : No sequence 8.12.98.
PCR Comments :
Length of sequence : 6 Consensus sequence is :
..
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wmc(20b7)
Plate reference : 20b7
WMC locus number : WMC Length of sequence : 6
Last updated : Lun 21 D残 1998 at 16:27
Owner : Byrne, Colorado State Date at Agrogene : 8.12.98 Public Domain : Yes
Comments : No sequence 8.12.98.
PCR Comments :
No sequence available for this clone
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wmc(20c7)
Plate reference : 20c7
WMC locus number : WMC Length of sequence : 6
Last updated : Lun 21 D残 1998 at 16:27
Owner : Byrne, Colorado State Date at Agrogene : 8.12.98 Public Domain : Yes
Comments : No sequence 8.12.98.
PCR Comments :
No sequence available for this clone
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wmc(20d7)
Plate reference : 20d7
WMC locus number : WMC Length of sequence : 6
Last updated : Lun 21 D残 1998 at 16:27
Owner : Byrne, Colorado State Date at Agrogene : 8.12.98 Public Domain : Yes
Comments : No sequence 8.12.98.
PCR Comments :
No sequence available for this clone
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wmc(20e7)
Plate reference : 20e7
WMC locus number : WMC Length of sequence : 6
Last updated : Lun 21 D残 1998 at 16:27
Owner : Byrne, Colorado State Date at Agrogene : 8.12.98 Public Domain : Yes
Comments : No sequence 8.12.98.
PCR Comments :
No sequence available for this clone
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wmc(20f7)
Plate reference : 20f7
WMC locus number : WMC Length of sequence : 361
Last updated : Mar 5 Jan 1999 at 15:36
Owner : Byrne, Colorado State Date at Agrogene : 8.12.98 Public Domain : Yes
Comments : Trimmed to insert at 3' end, 5' end not located. No substantial microsatellite. Duplicate with 24h1, 24h1 has precedence.
PCR Comments :
Length of sequence : 361 Consensus sequence is :
..
TGGACTAGAA ACGGCGANGG GAGTGCTTGG ATGGAAAGAG GGTTCGAGGT
GGTGCTCACC GTCGGCGTAC GTGGCGGCGA ACCGAGGCGG CGGCGGCGAA
ATGCGAATGG CGATGGCGTG CGCTGTGGTG GGTTTGTAGC GTTGGGTTTT
AGGGGGTTCG AGGGAGGTCG AGCTTGGCCT TTTATAGGTC ATCAACTTGG
AGGAGGGGGC GTCTCGGGAT TACGATCCCG AGAGGATCGG AACCGCGGCG
GCGGCGGTCG CGCTCTGGGC GGCGTTTGCG TGCGTGAGAG GAAAGAGAAG
GGATGGGGCT AGCGCGTCGG TGAGAGAGGG AGGGGTGGAG GCGATCGGGC
GACCGAGGTG G
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wmc511(20g7)
Plate reference : 20g7
WMC locus number : WMC511 Length of sequence : 285
Last updated : Mar 5 Jan 1999 at 15:48
Owner : Byrne, Colorado State Date at Agrogene : 8.12.98 Public Domain : Yes
Comments : Trimmed to insert at 3' end, 5 ' end not located. (GT)7 148 to 161, (GT)4 172 to 179, also complex CGTG repeats. Related to 23b5, reverse primer has 4 mismatches to 23b5, forward primer has no match.
PCR Comments :
Forward primer details :
cgcAcTcgcATgATTTTccT at 75 length 20 bases, Tm 65
Reverse primer details :
ATgcccggAAAcgAgAcTgT at 257 length 20 bases, Tm 66
Expected size of amplified fragment (Chinese Spring=) 202 bases.
Length of sequence : 285 Consensus sequence is :
..
CTCGAGGCCG TGGACAATTT GTCACCTCTT CTCTTCTTGT ACGTGCTCCA
TTTGTATCTC ACTTCCTATG GCTTCGCACT CGCATGATTT TCCTATTCTA
CGAACCTGTG TGTGCGTGTG CGTGTGCGTG TGCGTGTGCG TGTGCATGTG
TGTGTGTGTG TTTAACAACA TGTGTGTGTT AGAGAGAGCG ACAGATCGAC
CTACTCCTAC AGAGAGGTGG TGTGTAGTGT ACGATTTTAG CCGCGCGAGT
CGGTGCACAG TCTCGTTTCC GGGCATCCGG TAGGG
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wmc(20h7)
Plate reference : 20h7
WMC locus number : WMC Length of sequence : 322
Last updated : Lun 21 D残 1998 at 16:27
Owner : Byrne, Colorado State Date at Agrogene : 8.12.98 Public Domain : Yes
Comments : Trimmed to insert at 5' end and to Ssp1 at 3' end. No substantial microsatellite.
PCR Comments :
Length of sequence : 322 Consensus sequence is :
..
GAAGAATGGC ACGTCGTCGC CAAGAGCAGG AACACGCGAA GGCTCGCATC
CCGTTGGGCG GTTCTGGAGA AGGATCTGCC CTCGAGCATC TTCTCGCGGC
GGCGGCGAAC GGATCCACGA TGAGGTCTGC AATGAAGGCG GCGGTGGCTC
CTCTCGTACC TCCGCGGCGG CGAAGCTCCG TGATGAGGTC TGTCGGCGGC
TCCTCTCGGA TGTCAGCGGC GGCAATCTCG TACCTCGGCG GCGGGCGAGT
GGATCCATGA TCGACCTAGC AAATAGATAG ATCGAGGGAA GTCGCGTTGT
ATACCTAGAA TACTTTAATA TT
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wmc(24a8)
Plate reference : 24a8
WMC locus number : WMC Length of sequence : 196
Last updated : Mar 5 Jan 1999 at 15:54
Owner : Byrne, Colorado State Date at Agrogene : 8.12.98 Public Domain : Yes
Comments : Trimmed to insert at 5' end and to Ssp1 at 3' end. Bases 23 to 117 (complement) show homology to 20e7 bases 263 to 357 (95 in longest run, maxScore = 48). (CA)16 90 to 121, (GA)18 122 to 157. Too difficult to make primers.
PCR Comments :
Length of sequence : 196 Consensus sequence is :
..
GACTAGCCAC CCCCANGGTA NAGGGGCAAT CAAGAANGGA GAATCTANAA
GCCAAGAGAG AAACTAGCTA GGATCGGATC GAGTAGCATC ACACACACAC
ACACACACAC ACACACACAC AGAGAGAGAG AGAGAGAGAG AGAGAGAGAG
AGAGAGAAGG GCAACTGAAC TCCTCCTAGC AGTTCATTAG TCCACG
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wmc(24b8)
Plate reference : 24b8
WMC locus number : WMC Length of sequence : 206
Last updated : Mar 22 D残 1998 at 9:42
Owner : Byrne, Colorado State Date at Agrogene : 8.12.98 Public Domain : Yes
Comments : Trimmed to insert at both ends. Bases 167 to 189 show homology to 4h10 bases 120 to 142 (23 in longest run, maxScore = 19). No substantial microsatellite.
PCR Comments :
Length of sequence : 206 Consensus sequence is :
..
AGAGTAGAGA TAGCANAGAC GTTGGGAAAG GATCGCGCGC GCGCGGGAAA
AAGAGGCCGG GCGTGCGCTA GTTTTGGCGC GCGGCGTCCG GCGCGCTTTA
TAAAATCCAA CGCCCTCCCA CCGCTTTGTG CCTTGCCACC GCTCTCTCCC
CGCTCTGTGC CTCACCACCG CTCTCTCCCC GCTCTTTTTT GCCTCGCCGC
CGCCGC
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wmc(24c8)
Plate reference : 24c8
WMC locus number : WMC Length of sequence : 6
Last updated : Lun 21 D残 1998 at 16:27
Owner : Byrne, Colorado State Date at Agrogene : 8.12.98 Public Domain : Yes
Comments : No sequence 8.12.98.
PCR Comments :
No sequence available for this clone
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wmc(24d8)
Plate reference : 24d8
WMC locus number : WMC Length of sequence : 164
Last updated : Mar 22 D残 1998 at 9:42
Owner : Byrne, Colorado State Date at Agrogene : 8.12.98 Public Domain : Yes
Comments : Trimmed to insert at 3' end, 5' end not located. Bases 65 to 77 show homology to 21b4 bases 66 to 78 (13 in longest run, maxScore = 20). No substantial microsatellite.
PCR Comments :
Length of sequence : 164 Consensus sequence is :
..
GGACTAAGAA CAACGAANAG CCAGCCCCTC CATGCCTCCA CCATAAAAAG
GTAACCGTGA AGGGGCGCTG CTCATTTTCC CTCATCTTCC CCTGCTCCAT
CTTCTTCTCC CCACCAGAGC CGCTTCCTCC GCCGCCGCCG CCGCTCTCAC
ACCAGCCTAA TATT
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wmc(24e8)
Plate reference : 24e8
WMC locus number : WMC Length of sequence : 276
Last updated : Mar 22 D残 1998 at 9:42
Owner : Byrne, Colorado State Date at Agrogene : 8.12.98 Public Domain : Yes
Comments : Trimmed to insert at 5' end, 3' end not located. Bases 229 to 273 (complement) show homology to 2e8 bases 13 to 57 (45 in longest run, maxScore = 34). No substantial microsatellite.
PCR Comments :
Length of sequence : 276 Consensus sequence is :
..
ACCACTAGGT GGCCGGAGGC ACGTCGGCGG CNGTCACAGG CGGCGGNGGG
TTTCGGTCAT CGGCAAAACG GCGACTAGAA CTAGCAANCG TCGCGGANAC
AAANGGAAAA CGGTGTACAA CCTCACGGGG ATTGTGTAGG GCTGGTCGGC
NANCTCGGGG AGGCTTCGGT GGTGGCGAGC GGGCACCATC TATCTCGGGC
GGCCGGAGAT GGGGAANATT ANTCCACCCN CCTCGAGGGA TCCTCTANAG
TCNACCTGCA GGCATGCAAG CTTGGC
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wmc(24f8)
Plate reference : 24f8
WMC locus number : WMC Length of sequence : 157
Last updated : Lun 8 F思 1999 at 10:07
Owner : Byrne, Colorado State Date at Agrogene : 4.1.99 Public Domain : Yes
Comments : Sequence received 99. No trimming done to sequence at Agrogene, ends not located. Last 36 bases are vector. Bases 58 to 98 show homology to 1C2 bases 680 to 720 (41 in longest run, maxScore = 47). (TG)5 100 to 109, (GA)4 113 to 120. Too difficult to make primers. Bases 64 to 88 show homology to 22h2 bases 55 to 79 (25 in longest run, maxScore = 42).
PCR Comments :
Length of sequence : 157 Consensus sequence is :
..
GCGCGTGGCN TAATTTCCAC ATATTTAAAT TTAGCTTCAG TTCATGCTTA
TTTGGATTTG GACGTTTTAG GTGCGCCCTA GTTTTTTTAA TACTGATTAT
GTGTGTGTGA CTGAGAGAGA ACGCGCCTCG AGGGATCCTC TAGAGTCGAC
CTGCAGG
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wmc(24g8)
Plate reference : 24g8
WMC locus number : WMC Length of sequence : 209
Last updated : Mer 6 Jan 1999 at 11:17
Owner : Byrne, Colorado State Date at Agrogene : 8.12.98 Public Domain : Yes
Comments : Trimmed to insert at both ends. Bases 93 to 153 (complement) show homology to 2c1.2 bases 97 to 157 (61 in longest run, maxScore = 140). No substantial microsatellite. Duplicate, 2c1.2 has precedence.
PCR Comments :
Length of sequence : 209 Consensus sequence is :
..
GGCTTCATCA TAGAGAGGTG ATGTGTACGG CAGAGGCCAC CAACGATGGG
GTGCGAGAGA GAAAATGCCC ATAGGGAGGG AAGAGAAGGT GCGTGCGCGT
GAGAGGAGTC GACATCAAGA GAACGTGTTT GTTCGAGAGA CACCGAGGAA
GACAACTATA TATCGATGGT GCATGTAGGC GGGAATTAAA CAAAGGGATG
GTCCTATTG
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wmc(24h8)
Plate reference : 24h8
WMC locus number : WMC Length of sequence : 332
Last updated : Mer 6 Jan 1999 at 11:19
Owner : Byrne, Colorado State Date at Agrogene : 4.1.99 Public Domain : Yes
Comments : Trimmed to insert at 3' end, 5' end not located. (CA)4 21 to 28, (CA)10 30 to 49. No room for primers.
PCR Comments :
Length of sequence : 332 Consensus sequence is :
..
GCGCGTGGCN TACACAAACC CACACACAAC ACACACACAC ACACACACAC
TGGCTTCGCA TCAAGTGCAC GCAAGTAATA TCCAGCTACA TGGCTCGGCT
GCTGAATTCC CACCCGGACA TGCTGCTCAC CGGCAGCAGG CAGCACCTGG
TCAGTGAAGC CATGGATGAA TTCGAGTGCT TCTTGGACCG CGCCATGCTA
GGTAAGAGCG GCAAGCCGCT CAGCAAAGAC GAGCTGACCA AGATTATCGC
CGACGGGGCG GAAGCGGAAC GTGTCCACAT GCAGGTGCCC ATCGAGATCA
TCGACGACGG GCCGGAAGTG GAACATGTCC AC
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wmc512(24a9)
Plate reference : 24a9
WMC locus number : WMC512 Length of sequence : 230
Last updated : Lun 30 oct 2000 at 16:59
Owner : Byrne, Colorado State Date at Agrogene : 4.1.99 Public Domain : Yes
Comments : Sequence received in 99. Trimmed to insert at 3' end, 5' end not located. Bases 142 to 168 show homology to 6A1 bases 611 to 637 (27 in longest run, maxScore = 68). Reverse primer has 2 mismatches to 6A1, forward primer does not match. (TC)7 187 to 200. Bases 64 to 95 show homology to TW2e11.2 bases 86 to 117 (complement) (32 in longest run, maxScore = 51). Bases 64 to 86 show homology to TW6c08.1 bases 61 to 83 (complement) (23 in longest run, maxScore = 72).
PCR Comments : 61C anneal, product.
Forward primer details :
AggggTTcTTTcAAgTTcgc at 12 length 20 bases, Tm 62
Reverse primer details :
cccAgggAgATggAgAgTTT at 201 length 20 bases, Tm 62
Expected size of amplified fragment (Chinese Spring=) 209 bases.
Length of sequence : 230 Consensus sequence is :
..
GCGCGTGGAN TAGGGGTTCT TTCAAGTTCG CATGCATATA TACTCCATGT
ATAGGTCTCT CTTGCACACT ATGTATGATT CTCTAGTCCA AGCTAAATAT
CTTGGGTGCA CTCATTGTAC GCACACAAAT TCCCTGGCTC ATTGCCCGTA
ACTCTCTCAC GCACCACTCT GCCATCTCGG AGCTCTTCTC TCTCTCTCTC
AAACTCTCCA TCTCCCTGGG TCACACATAC
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wmc(24b9)
Plate reference : 24b9
WMC locus number : WMC Length of sequence : 6
Last updated : Lun 21 D残 1998 at 16:27
Owner : Byrne, Colorado State Date at Agrogene : 8.12.98 Public Domain : Yes
Comments : No sequence 8.12.98.
PCR Comments :
No sequence available for this clone
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wmc(24c9)
Plate reference : 24c9
WMC locus number : WMC Length of sequence : 6
Last updated : Lun 21 D残 1998 at 16:27
Owner : Byrne, Colorado State Date at Agrogene : 8.12.98 Public Domain : Yes
Comments : No sequence 8.12.98.
PCR Comments :
No sequence available for this clone
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wmc(24d9)
Plate reference : 24d9
WMC locus number : WMC Length of sequence : 285
Last updated : Mer 6 Jan 1999 at 11:29
Owner : Byrne, Colorado State Date at Agrogene : 4.1.99 Public Domain : Yes
Comments : Sequence received in 99. Trimmed to insert at both ends. (CA)22 229 to 272. No room for primers.
PCR Comments :
Length of sequence : 285 Consensus sequence is :
..
CCAAATTGTT GTGCACATGT CTTTTGATTT TTGGGGTTGT TTTGGGTAAT
GGGCGCTAAC TGCGTACTGT TGCATAGCCG ACTACAAGCC TAGAGAAAGG
AGGAGCAGAC AATCATTGGA CATTTTTCAA TGAAGGACAT TTTTTATTGA
CTCTTAGTAT AGCATCGAGG GATACAATCA GAATGAGTAC ACATTTGGCC
TCTGCATATC TAGGATCCAC ACAGCAAACA CACACACACA CACACACACA
CACACACACA CACACACACA CAAAGAGATC GCGCC
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wmc(24e9)
Plate reference : 24e9
WMC locus number : WMC Length of sequence : 208
Last updated : Lun 21 D残 1998 at 16:27
Owner : Byrne, Colorado State Date at Agrogene : 8.12.98 Public Domain : Yes
Comments : Trimmed to insert at both ends. No substantial microsatellite.
PCR Comments :
Length of sequence : 208 Consensus sequence is :
..
CATTTCCTCg CCTCCCTCCC CTCGAATCAA AGAAGAAGAA AATACTCCTC
GCCTCCATTA CGAGCCCCGC CGCCACCTCC CAAAATCCCG AGCGCTTCCG
ACTCCGAGAT CTGAGAGCTC CGCCACCGCC ACCTCCCAAA ATCCCGAGCG
CTTCCGACTC CGAGATCTGA GAGCTCCGCC ACCGCCACCG CCGCCGCCGT
CCCCGTCC
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wmc(24f9)
Plate reference : 24f9
WMC locus number : WMC Length of sequence : 110
Last updated : Lun 8 F思 1999 at 10:07
Owner : Byrne, Colorado State Date at Agrogene : 8.12.98 Public Domain : Yes
Comments : Trimmed to insert at 3' end (NB sequence corrupted) , 5' end not located. Last 37 bases are from vector. Bases 2 to 33 show homology to 19c1 bases 12 to 43 (32 in longest run, maxScore = 28). (GT)4 75 to 82, (GT)6 84 to 95. Too difficult to make primers. Bases 46 to 82 show homology to 22h3 bases 150 to 186 (complement) (37 in longest run, maxScore = 42).
PCR Comments :
Length of sequence : 110 Consensus sequence is :
..
TTCTAAAAAT NAACAAGATA GTTCTAATTC ATCCAAACAT TAAGAAATTA
AACAGAAAAT AAGTAAAAAA ATATGTGTGT GTAGTGTGTG TGTGTACATG
TGTGTATGCC
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wmc(24g9)
Plate reference : 24g9
WMC locus number : WMC Length of sequence : 124
Last updated : Lun 21 D残 1998 at 16:27
Owner : Byrne, Colorado State Date at Agrogene : 8.12.98 Public Domain : Yes
Comments : Trimmed to insert at 3' end, 5' end not located. No substantial microsatellite.
PCR Comments :
Length of sequence : 124 Consensus sequence is :
..
GGCGCGTTAC CTTTGAGTTT CAACGATCCA TGTATCAAAA GTTATTCTTT
TGCCACTTAG GGGAATCATT CTACGAGTCA CCTCTTCTAA GGTGTCCCGT
TATGGAATCA TGGCAATTAT CTCC
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wmc513(24h9)
Plate reference : 24h9
WMC locus number : WMC513 Length of sequence : 354
Last updated : Mer 6 Jan 1999 at 11:44
Owner : Byrne, Colorado State Date at Agrogene : 8.12.98 Public Domain : Yes
Comments : Trimmed to Ssp1 at 5' end and to insert at 3' end (3' linker corrupted ) . (CA)21 118 to 159.
PCR Comments : 61C anneal, polymorphic on acrylamide.
Forward primer details :
TgAATTgAATcTggTTgcgg at 58 length 20 bases, Tm 64
Reverse primer details :
TggcAATTcAcAggcAcATA at 247 length 20 bases, Tm 63
Expected size of amplified fragment (Chinese Spring=) 209 bases.
Length of sequence : 354 Consensus sequence is :
..
AATATTCCGC CTGGCCGATG GCAAACGCAC ATATAGCAAA CTTGGCTTGC
CTTGANATGA ATTGAATCTG GTTGCGGCGG GGCTAGGCAG CAGATGGATT
GATTGATGGA CTANCAACAC ACACACACAC ACACACACAC ACACACACAC
ACACACACAC TCGCACATGT NACATATTTG TCGTGTTTAC TTCTTCAACT
CATAGTGATT ANAATCTANT TGCATGCATG CATATAATAT ACTANGTATG
TGCCTGTGAA TTGCCATGGG GTCAAATTTA TTTTAAGACA AATCTTGATG
CNAAGCATAT AGACAAANTA AGATTATGTT TTGTTTTGGT TATAACGTTA
ATTA
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wmc514(22A1)
Plate reference : 22A1
WMC locus number : WMC514 Length of sequence : 229
Last updated : Mar 9 F思 1999 at 16:09
Owner : Bright, Zeneca Date at Agrogene : 24.12.98 Public Domain : Yes
Comments : Trimmed to insert at both ends. Bases 134 to 158 show homology to 2g12 bases 314 to 338 (25 in longest run, maxScore = 41). (GT)7 39 to 52, (GT)5 106 to 115, (GT)12 152 to 175. May get weak fragment at 186bases due to weak internal homology to the forward primer.
PCR Comments : 61C anneal, cpmplex but polymorphic on acrylamide.
Forward primer details :
cATgccTATgTgATgccTgc at 2 length 20 bases, Tm 64
Reverse primer details :
AccAgTgcgAgggTAgAAgc at 206 length 20 bases, Tm 64
Expected size of amplified fragment (Chinese Spring=) 224 bases.
Length of sequence : 229 Consensus sequence is :
..
GCATGCCTAT GTGATGCCTG CGTGTGTGCT GCTGCTGCGT GTGTGTGTGT
GTGCTGCTTG CGTGTGTGTT GCTGCGTGTG TGCGCACGTG CATGTGTGTT
GCTACGTGTG TGTGTGCGTG TGTGTGTGCA CGTGCGCGTG CGTGTTGTTG
CGTGTGTGTG TGTGTGTGTG TGTGTTGGTG CGTGTGTATG TGTTGCTGCG
TGTGTGCTTC TACCCTCGCA CTGGTATTG
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wmc(22b1)
Plate reference : 22b1
WMC locus number : WMC Length of sequence : 191
Last updated : Lun 8 F思 1999 at 10:10
Owner : Bright, Zeneca Date at Agrogene : 24.12.98 Public Domain : Yes
Comments : Trimmed to insert at both ends. Bases 1 to 24 show homology to 6b11 bases 618 to 641 (24 in longest run, maxScore = 42). (GA)9 107 to 124, (GT)7 171 to 184. No room for primers.
PCR Comments :
Length of sequence : 191 Consensus sequence is :
..
GCTCCGCCTA GAGCATGTGT GTGTAAGATG GAGTCTTAGT ATGTGTGTGG
GGTGTGTGTG TGTGTGAGAG AGAGAGGGGA GAGAGAGATG GAGCCTTAGT
TTGTGTGAGA GAGAGAGAGA GAGATGGAGT CTAAGTGTGT GTGTGTGTGG
AGGGGAGGGG GTGCGTGCAT GTGTGTGTGT GTGTTTGTGT G
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wmc515(22c1)
Plate reference : 22c1
WMC locus number : WMC515 Length of sequence : 529
Last updated : Mar 9 F思 1999 at 16:24
Owner : Bright, Zeneca Date at Agrogene : 24.12.98 Public Domain : Yes
Comments : Trimmed to insert at both ends. Bases 160 to 182 show homology to 5f11 bases 131 to 153 (23 in longest run, maxScore = 73). (CA)16 90 to 121.
PCR Comments : 61C anneal, smear;
Forward primer details :
TTgTgcgAAgAccgATAATAAc at 6 length 22 bases, Tm 61
Reverse primer details :
TggAAATgTcATgcgTgTAgTA at 175 length 22 bases, Tm 61
Expected size of amplified fragment (Chinese Spring=) 191 bases.
Length of sequence : 529 Consensus sequence is :
..
GAAATTTGTG CGAAGACCGA TAATAACACA GACGATTGCT GCTAATAAGA
CGTGTGTGTT GTGCGTTCGG ATTGCATACA GAACAACAAC ACACACACAC
ACACACACAC ACACACACAC ACTTATAAGG ACATGGTTGC ATACCCAAAT
TAAACATCCA ATTACATAGG TGGCTACTAC ACGCATGACA TTTCCACACA
CCAAAGTCAA TTATATATTA CATGCATAAT TAACTAGGAT AAACGGCCAT
CTGATCATCA TCTATTTCTT GGGACGCTTA TTGCTACTGC TCTGCTTGTG
GCTCAATGCA GCCTCGTTGA TTTTGGTAAC GAGGCAGTTC CTCATGTCAA
CAATCCGCAT GTGCATCTCG CAGCATGTGT ACACGCTCTT GGACGCGAAC
CTCAGGTGAG GTTCATCCAG TTGCCGCGTC CACACCCCAT GCCATGATAC
GGGATTTGTT CTCTTGGCAT CTTGCTTCAT CTTTTTGTAG TAGGGGTTGA
CGATGGCCGA GGCGAGTTCA ACCAGGGAG
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wmc516(22d1)
Plate reference : 22d1
WMC locus number : WMC516 Length of sequence : 137
Last updated : Mar 9 F思 1999 at 16:44
Owner : Bright, Zeneca Date at Agrogene : 24.12.98 Public Domain : Yes
Comments : Trimmed to insert at both ends. Bases 108 to 123 (complement) show homology to 10a10 bases 127 to 142 (16 in longest run, maxScore = 25). Reverse primer has mismatch to 10a10, forward primer has no apparent homology to 10a10. (CA)12 21 to 44, (CA)6 94 to 105.
PCR Comments : 51C anneal, product (130 and 150 bases).
Forward primer details :
gggccAcgAATAAAcAg at 3 length 17 bases, Tm 57
Reverse primer details :
gAcTcgcAAcTAggggT at 113 length 17 bases, Tm 55
Expected size of amplified fragment (Chinese Spring=) 127 bases.
Length of sequence : 137 Consensus sequence is :
..
GTGGGCCACG AATAAACAGA CACACACACA CACACACACA CACATCTCCT
AGTTGCGAGT GGAGTCAACT TGCAACAGGG GGGCACGAAT AAACACACAC
ACACACGCAC ACACCCCTAG TTGCGAGTCG ATGGGCG
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wmc(22e1)
Plate reference : 22e1
WMC locus number : WMC Length of sequence : 220
Last updated : Lun 9 oct 2000 at 14:43
Owner : Bright, Zeneca Date at Agrogene : 24.12.98 Public Domain : Yes
Comments : Reverse sequence only. Trimmed to insert at both ends. Bases 134 to 161 (complement) show homology to 7h7 bases 308 to 335 (28 in longest run, maxScore = 34).(GGT)5 25 to 39,(TTG)6 65 to 82,(TTG)7 89 to 109,(GCTGGT)6 178 to 213. No room for primers. Duplicate with 22g1, 22e1 has priority. Bases 88 to 109 show homology to TW4c06.2 bases 100 to 121 (complement) (22 in longest run, maxScore = 24). 22e1 is a duplicate of TW4c06.2, TW4c06.2 has priority. Bases 126 to 142 show homology to TW5c01.1 bases 228 to 244 (complement) (17 in longest run, maxScore = 20).
PCR Comments :
Length of sequence : 220 Consensus sequence is :
..
GGTGTTGGTG TTGGTGGTGG TGTTGGTGGT GGTGTTGGTG TTGGCGTTGG
TGTTGGTGTT GGTGTTGTTG TTGTTGTTGT TGTGGTGGTT GTTGTTGTTG
TTGTTGTTGA TGCTGGTGGT GGTGTTGGTG GTGTTGTTGT TGCTGTTGCT
GTTGCTGTTG CCGTTGCTGT TGCTGGTGCT GGTGCTGGTG CTGGTGCTGG
TGCTGGTGCT GGTGTTGTTG
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wmc(22f1)
Plate reference : 22f1
WMC locus number : WMC Length of sequence : 6
Last updated : Mer 3 F思 1999 at 14:58
Owner : Bright, Zeneca Date at Agrogene : 24.12.98 Public Domain : Yes
Comments : 22F1 culture didn't grow after plating out
PCR Comments :
No sequence available for this clone
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wmc(22g1)
Plate reference : 22g1
WMC locus number : WMC Length of sequence : 201
Last updated : Mer 10 F思 1999 at 10:07
Owner : Bright, Zeneca Date at Agrogene : 24.12.98 Public Domain : Yes
Comments : Trimmed to insert at both ends. Bases 1 to 201 (complement) show homology to 21e2 bases 1 to 201 (201 in longest run, maxScore = 111). (GT)12 20 to 43, (GT)14 64 to 91. Duplicate, 21e2 has precedene.
PCR Comments :
Length of sequence : 201 Consensus sequence is :
..
GAATTGTGTG CTCGGGGGAG TGTGTGTGTG TGTGTGTGTG TGTTGTGCTG
CATGTCTCTC TCTGTGTGTG TGTGTGTGTG TGTGTGTGTG TCATATATTG
AGAGAAAACA AACCTAAGGA GAGAAATGGG TATTCACAAA GAGATTGTGC
GGGCCTTGAG GTGGGCAGGG GCCGGGTGAG GGTGTCAAAA TGTGCGCGTT
G
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wmc517(22h1)
Plate reference : 22h1
WMC locus number : WMC517 Length of sequence : 256
Last updated : Mer 10 F思 1999 at 10:17
Owner : Bright, Zeneca Date at Agrogene : 24.12.98 Public Domain : Yes
Comments : Trimmed to insert at 5' end and to Ssp1 at 3' end. Bases 219 to 232 show homology to 7g4 bases 201 to 214 (14 in longest run, maxScore = 41). Reverse primer has 5 mismatches to 7g4, forward primer no apparent homology. (CA)16 36 to 67, (CA)6 113 to 124.
PCR Comments : 61C anneal, polymorphic on acrylamide (180-200 bases)
Forward primer details :
ATccTgAcgTTAcAcgcAcc at 5 length 20 bases, Tm 63
Reverse primer details :
AccTggAAcAccAcgAcAAA at 173 length 20 bases, Tm 63
Expected size of amplified fragment (Chinese Spring=) 188 bases.
Length of sequence : 256 Consensus sequence is :
..
GTCGATCCTG ACGTTACACG CACCCCACTC TCTAACACAC ACACACACAC
ACACACACAC ACACACATGT ACACACCCTC TCTCTACCAT TCGGACACTC
CTCTCTCTGC GACACACACA CACAATCTTC CAAACATGCA TATGCGCCTC
CCTTGTTACG TTTCGCTGCC ATTTTGTCGT GGTGTTCCAG GTGGCGTTAA
TTGTGAAACT ATTCCATGTT GTTTCAAATG AATACCAAAC TTGTAACTCA
AATATT
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wmc(22a2)
Plate reference : 22a2
WMC locus number : WMC Length of sequence : 6
Last updated : Mer 3 F思 1999 at 14:58
Owner : Bright, Zeneca Date at Agrogene : 24.12.98 Public Domain : Yes
Comments : 22A2 sequence failed
PCR Comments :
No sequence available for this clone
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wmc518(22b2)
Plate reference : 22b2
WMC locus number : WMC518 Length of sequence : 993
Last updated : Mer 10 F思 1999 at 10:27
Owner : Bright, Zeneca Date at Agrogene : 24.12.98 Public Domain : Yes
Comments : No overlap between forward and reverse sequences. Trimmed to insert at 3' end, 5' end not located. Bases 79 to 96 (complement) show homology to 20b9 bases 100 to 117 (18 in longest run, maxScore = 19). NB poor quqlity sequence. (CA)24 101 to 148.
PCR Comments : 61C anneal, product (70 bases). 51C anneal, monomorphic product .
Forward primer details :
AAcAATAggTTTTggggggAA at 52 length 21 bases, Tm 63
Reverse primer details :
gAcccccTggTcTTgATcTTT at 167 length 21 bases, Tm 63
Expected size of amplified fragment (Chinese Spring=) 136 bases.
Length of sequence : 993 Consensus sequence is :
..
GNAGCGNNNN NNNNAGGNNN NNNNTNNNTT NANTCCCTTN GCGCGCGGAC
TAACAATAGG TTTTGGGGGG AACCGGCACA ACCCTCTAGG GGTGGCCTAT
CACACACACA CACACACACA CACACACACA CACACACACA CACACACATA
TATAAAAATA CCGGCAAAAG ATCAAGACCA GGGGGTCCAC ACCATAGCCA
CGAGGGTGGG GGCNCGCNNT NNCTATNGNT ATCNCAANNG NTNTANNTAN
NNNNGCNNCN NNNNTCTTGA NTNNNTNNNA CNTANTTNTT ANCANNTNNN
NNCGTTNNNG NNNNNTNNNT ANGTNNTNNA TNNGNNTGNC CNTNNANATA
TAANGGTNGN NTNNATNTAG NNTNTANTTA NNNGTTATAT AGNNGCATTN
NACTNNNNNN TGGNTGNNNN NATTCNGNNN NGANNAANNT NTNNNNNTAC
GNNNTGNNTA AGTNNNNNNN TNANTGTGCA NGNNANCANT NTNATNNTGN
TTNNNTANNN NNCGTNGNCT TATNCTGGGC NTNTANCATN NTNGTTNNTG
TTNANNNTNT GNNCGTCNGN NNTTTNTTCA NNTNTTNNGN GNAAGNANTT
ANTTATTATT ATAGNNNCTN NTNTTNTNNT NNNNNNNNNT NTTTTCNTNA
NNNNTNNNNT NCNNTNTNTN TNNTANNNNT NNNNNNNNNN NNTNNNNNNC
TNTNNNNGNN ATCNTTNTTN ANNTTNNTTA TNNTTTNNAG TCNNTTTNNN
NTNNTNTTTN GNTTNNTCNT NNNNTNNTNN TTATNNGNAG TNNNNNNTNN
NTTNNTTNNG GTTNTNTTTC NNTNAATNGN NTANANNATT TNCNNTNCTN
AGGNNANNNN NNNNNNGNNN NANTTNNNNN TNNNNTNNNT NNNNNTNAGN
NTATNATTNN NNNTAAGNNT TNGTTTTN
(break)
NNNNNNNNNN NNNNNNNCCC CCTACCTCGT GGGCCCCCTG GAGCTCCTCC
GACCTCAACT CCAAC
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wmc(22c2)
Plate reference : 22c2
WMC locus number : WMC Length of sequence : 268
Last updated : Mer 10 F思 1999 at 10:29
Owner : Bright, Zeneca Date at Agrogene : 24.12.98 Public Domain : Yes
Comments : Trimmed to Ssp1 at 5' end and to insert at 3' end. Bases 139 to 268 show homology to 7e4 bases 114 to 243 (130 in longest run, maxScore = 95). (GT)14 135 to 162. Duplicate, 7e4 has precedence.
PCR Comments :
Length of sequence : 268 Consensus sequence is :
..
AATATTTGAA GAATGTTATC CGTACTTGAA GTGCATGTCA TGTTTGTGTG
AATCTTGTTC TTGTAGCATG TTGTTATGAT GCTTGCAATA TGCCTACTTG
TTGTTTTGGG CAGATTGTTA TTCAAACTTG CTTCGTGTGT GTGTGTGTGT
GTGTGTGTGT GTTGAACCGT TGCTCCGTTT TGATCATGTC CTATCTAAAA
CTTGCTTGGT TTTGCATGTA GTTTCATCAT GACATGTTGC ATCCTTGTTT
TGAGGTGTGT GCTTGATG
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wmc(22d2)
Plate reference : 22d2
WMC locus number : WMC Length of sequence : 179
Last updated : Mer 10 F思 1999 at 10:32
Owner : Bright, Zeneca Date at Agrogene : 24.12.98 Public Domain : Yes
Comments : Trimmed to Ssp1 at 5' end and to insert at 3' end. (CA)17 126 to 159, (CA)5 170 to 179. No room for primers.
PCR Comments :
Length of sequence : 179 Consensus sequence is :
..
AATATTACAA CTGCAATGTA TGTTGAGAAG AAAAACACAA CTCTGCATGG
ATCATGACAG AAAAGCGATT CCTACCAGTA TATAATTTTT TGTGAAGGTA
CAACCCACTC ACGCAATCAG ACAGACACAC ACACACACAC ACACACACAC
ACACACACAG TGGATCTCCC ACACACACA
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wmc(22e2)
Plate reference : 22e2
WMC locus number : WMC Length of sequence : 6
Last updated : Mer 3 F思 1999 at 14:58
Owner : Bright, Zeneca Date at Agrogene : 24.12.98 Public Domain : Yes
Comments : 22E2 culture didn't grow after plating out
PCR Comments :
No sequence available for this clone
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wmc(22f2)
Plate reference : 22f2
WMC locus number : WMC Length of sequence : 117
Last updated : Mer 10 F思 1999 at 11:33
Owner : Bright, Zeneca Date at Agrogene : 24.12.98 Public Domain : Yes
Comments : Trimmed to insert at 5' end, 3' end not located. Bases 81 to 117 (complement) show homology to 17d8.2 bases 476 to 512 (37 in longest run, maxScore = 31). Bases 1 to 84 show homology to 22f3 bases 1 to 84 (84 in longest run, maxScore = 72). No substantial microsatellite. Duplicate with 22f3, 22f2 has priority.
PCR Comments :
Length of sequence : 117 Consensus sequence is :
..
GGGTAAGATG GACAAGAACG CCTGGCACGG TGTCTGGCAT GAAAGGCTAG
ATGAACAACA CATCAAGTAC GCAGCTAAGG ACGCGCCTCG AGGAATTCAC
TGGCCGTCGT TTTACAA
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wmc(22g2)
Plate reference : 22g2
WMC locus number : WMC Length of sequence : 271
Last updated : Mer 10 F思 1999 at 10:34
Owner : Bright, Zeneca Date at Agrogene : 24.12.98 Public Domain : Yes
Comments : Trimmed to insert at both ends. Bases 134 to 215 show homology to 20f8 bases 118 to 199 (82 in longest run, maxScore = 101). (GT)4 6 to 13, (GT)15 16 to 45, (GT)5 110 to 119. No room for primers.
PCR Comments :
Length of sequence : 271 Consensus sequence is :
..
AGCGAGTGTG TGTGCGTGTG TGTGTGTGTG TGTGTGTGTG TGTGTGAAAG
AGGAGTAGAT AGATTATTAT CAAGATCGAT GTGCCACCAT ACTCCTTTGG
TGCCGGGTAG TGTGTGTGTT TGTGTATGTT TGTGAGAGAA GCCAGTCGAT
AGATTAGTAT CAAGATCGAG GTGTCACCCT ACTCCTTCGG TGTTGGGAAG
TGTGGGTGTG TGGGGGGGCA GTGACACTCA CATATCTCTA CTCTTATAAA
AAATAGAGTT GGTGATGATG G
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wmc(22h2)
Plate reference : 22h2
WMC locus number : WMC Length of sequence : 113
Last updated : Lun 8 F思 1999 at 10:07
Owner : Bright, Zeneca Date at Agrogene : 24.12.98 Public Domain : Yes
Comments : Trimmed to Ssp1 at 5' end and to insert at 3' end ( NB 3' linker corrupted). Bases 55 to 79 show homology to 24f8 bases 64 to 88 (25 in longest run, maxScore = 42). No substantial microsatellite.
PCR Comments :
Length of sequence : 113 Consensus sequence is :
..
AATATTTCCA TATATTTGAA TTTAGCTCCA GTTTGTGTTT ATTTGGATTT
GGATGTTTTA GGTGCGCCCT AGTTTTTTTT AATACTTATT TTGTGTGTGT
GACTGAGAGA GGA
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wmc(22a3.1)
Plate reference : 22a3.1
WMC locus number : WMC Length of sequence : 911
Last updated : Mar 20 juin 2000 at 11:19
Owner : Bright, Zeneca Date at Agrogene : 24.12.98 Public Domain : Yes
Comments : No overlap between forward and reverse sequences. Ends not located. This is the forward sequence. Bases 52 to 448 show homology to 4f1 bases 23 to 419 (397 in longest run, maxScore = 408). Bases 436 to 460 show homology to 22e5.1 bases 571 to 595 (25 in longest run, maxScore = 29). No substantial microsatellite. Duplicate, 4f1 has precedence. Bases 118 to 325 show homology to TW3d03 bases 5 to 212 (208 in longest run, maxScore = 264). Bases 139 to 342 show homology to TW3h08 bases 210 to 413 (204 in longest run, maxScore = 222). Bases 66 to 404 show homology to TW3d09 bases 161 to 499 (339 in longest run, maxScore = 210). Bases 72 to 460 show homology to TW3f11 bases 243 to 631 (389 in longest run, maxScore = 237). Looks like most of this is PUC vector
PCR Comments :
Length of sequence : 911 Consensus sequence is :
..
GNNAGAGGNN NNNNNNNGGN NNNNNNNNNT TANTCCCTTG ACGCGCCTTG
AGGGATCCTC TAGAGTCGAC CTGCAGGCAT GCAAGCTTGG CGTAATCATG
GTCATAGCTG TTTCCTGTGT GAAATTGTTA TCCGCTCACA ATTCCACACA
ACATACGAGC CGGAAGCATA AAGTGTAAAG CCTGGGGTGC CTAATGAGTG
AGCTAACTCA CATTAATTGC GTTGCGCTCA CTGCCCGCTT TCCAGTCGGG
AAACCTGTCG TGCCAGCTGC ATTAATGAAT CGGCCAACGC GCGGGGAGAG
GCGGTTTGCG TATTGGGCGC TCTTCCGCTT CCTCGCTCAC TGACTCGCTG
CGCTCGGTCG TTCGGCTGCG GCGAGCGGTA TCAGCTCACT CAAAGGCGGT
AATACGGTTA TCCACAGAAT CAGGGGATAA CGCAGGAAAG AACATGTGAG
CAAAAGGCNA GCAAAAGGCC AGGAACCGTA AAAAGGCCGC GTTGCTGGCG
TTTTTCCATA GGCTCCGCCC CCCTGACGAG CATCACAAAA ATCGACGCTC
AAGTCAGAGG TGGCGAAACC CGACAGGACT ATAAAGATAC CAGGCGTTTC
CCCCTGGAAG CTCCCTCGTG CGCTCTCCTG TTCCGACCCT GCCGGTTACC
GGATACCTGT CCGCCTTTCT CCCTTCGGGA AGCGTGGCGC TTTCTCATAG
CTCACGCTGT AGGTATCTCA GTTCGGAGTA NGTCGTTCGC TCCAAGCTGG
GCTGTGTGCA CGAACCCCCC GTTAACCCGA NCGCTGGGCC CTATNCGGNA
ACTATCGNCT TGAGTCCAAC CCGGAAGACA CGANTTATCG NCACTGGCAG
CAACCCTGGT AACAGGANTA CCAGANCCNA GGTATTGTAG GCCGGGCNTC
CAAANTTNTT T
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wmc(22a3.2)
Plate reference : 22a3.2
WMC locus number : WMC Length of sequence : 904
Last updated : Lun 8 F思 1999 at 10:07
Owner : Bright, Zeneca Date at Agrogene : 24.12.98 Public Domain : Yes
Comments : No overlap between forward and reverse sequences. Ends not located. This is the reverse sequence. Bases 535 to 817 show homology to 19d6 bases 478 to 760 (283 in longest run, maxScore = 239). Bases 164 to 172 show homology to 22e5.2 bases 110 to 118 (9 in longest run, maxScore = 57). No substantial microsatellite.
PCR Comments :
Length of sequence : 904 Consensus sequence is :
..
AAACGTTTTT GGGGGGCAAA AACCTTTCAA GGATTTTTTC CGTTGTTAAG
ATCCCAGTTT TGATGTAAAC CCATTGGGGG CCACCCAACT TGATTCTTCA
AACATCTTTT ACTTTTCACA AGCGTTTTCT GGGTGAAGCA AAACCAGGAA
AGGCAAAATG CCGCAAAAAA GGGAATAAGG GCCGACACGG AAATGTTGAA
TACTTCATAC CTCTTCCTTT TTCAATATTA TTGAAGCATT TATCAGGGTT
ATTGTCTCAT GAGCGGATAC ATATTTGAAT GTATTTAGAA AAATAAACAA
ATAGGGGTTC CGCGCACATT TTCCCCGAAA AGTGCCACCT GACGTCTAAG
AAACCCATTA TTATCATGGC ATTAACCTAT AAAAATAGGC GTATCACGAG
GCCCTTTCGT CTCGCGCGTT TCGGTGATGA CGGTGAAAAC CTCTGACACA
TGCAGCTCCC GGAGACGGTC ACAGCTTGTC TGTAAGCGGA TGCCGGGAGC
AGACAAGCCC GTCAGGGCGC GTCAGCGGGT GTTGGCGGGT GTCGGGGCTG
GCTTAACTAT GCGGCATCAG AGCAGATTGT ACTGAGAGTG CACCATATGC
GGTGTGAAAT ACCGCACAGA TGCGTAAGGA GAAAATACCG CATCAGGCGC
CATTCGCCAT TCAGGCTGCG CAACTGTTGG GAAGGGCGAT CGGTGCGGGC
CTCTTCGCTA TTACGCCAGC TGGCGAAAGG GGGATGTGCT GCAAGGCGAT
TAAGTTGGGT AACGCCAGGG TTTTCCCAGT CACGACGTTG TAAAACGACG
GCCAGTGAAT TCCTCGAGGC GCGCCTCGAG GGATCCTCTA GAGTCGACCT
GCAGGCATGC AAGCAAGGGT TTCAGAGGGA ATCAAAAAAA AAAAAAAACT
TTCC
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wmc519(22b3)
Plate reference : 22b3
WMC locus number : WMC519 Length of sequence : 164
Last updated : Mer 10 F思 1999 at 11:07
Owner : Bright, Zeneca Date at Agrogene : 24.12.98 Public Domain : Yes
Comments : Trimmed to insert at both ends. Bases 6 to 46 (complement) show homology to 4f4 bases 119 to 159 (41 in longest run, maxScore = 54). Take care, reverse primer has 2 mismatches to 4f4, forward primer is homologous. (GT)4 59 to 66, (GT)7 69 to 82, (GT)11 105 to 126.
PCR Comments : 61C anneal, smear.
Forward primer details :
cggcggcAgggAcTTT at 20 length 16 bases, Tm 66
Reverse primer details :
cccgcgTcATTTccTcAA at 147 length 18 bases, Tm 65
Expected size of amplified fragment (Chinese Spring=) 145 bases.
Length of sequence : 164 Consensus sequence is :
..
GGAGGCCTTG CGGTGGCGGC GGCGGCAGGG ACTTTGCTAG GGTTTCAAGC
GAGGGAGGGT GTGTGTGCGT GTGTGTGTGT GTGCGCATGC CCGAGGAGGT
TTTGGTGTGT GTGTGTGTGT GTGTGTGAGG AGGGGGCGCC GGGTGTTTGA
GGAAATGACG CGGG
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wmc(22c3)
Plate reference : 22c3
WMC locus number : WMC Length of sequence : 309
Last updated : Lun 8 F思 1999 at 10:17
Owner : Bright, Zeneca Date at Agrogene : 24.12.98 Public Domain : Yes
Comments : Trimmed to Ssp1 at 5' end and to insert at 3' end. Bases 14 to 57 (complement) show homology to 25d9 bases 142 to 185 (44 in longest run, maxScore = 45). (GT)7 142 to 155, (GT)25 182 to 231. Too difficult to make primers.
PCR Comments :
Length of sequence : 309 Consensus sequence is :
..
AATATTTAAC TTCTCTATCT AATTCATCTA ACATTAACAT TCTAACATTC
TTATCTAGGT AATTCATCTA ATTCGATCAT CTAATTAACA TTTTGACATG
CATTAATCTA AAAGATAGAA AAAAAATAAG TAAAAAAATA TGTGTGTGTG
TGTGTGCGCG CGTGCGTGCG TGTACGTGCT TGTGTGTGTG TGTGTGTGTG
TGTGTGTGTG TGTGTGTGTG TGTGTGTGTG TACGATCGAG GGCGGCGGCG
TACGGGCGGC GGGGCGATAC GGCAATGACG CGGGCGGCGC GAGACAGCGA
CGACGGGCG
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wmc(22d3)
Plate reference : 22d3
WMC locus number : WMC Length of sequence : 6
Last updated : Mer 3 F思 1999 at 14:58
Owner : Bright, Zeneca Date at Agrogene : 24.12.98 Public Domain : Yes
Comments : 22D3 culture didn't grow after plating out
PCR Comments :
No sequence available for this clone
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wmc(22e3)
Plate reference : 22e3
WMC locus number : WMC Length of sequence : 92
Last updated : Mer 3 F思 1999 at 14:58
Owner : Bright, Zeneca Date at Agrogene : 24.12.98 Public Domain : Yes
Comments : Trimmed to insert at both ends (NB 3' linker corrupted). No substantial microsatellite.
PCR Comments :
Length of sequence : 92 Consensus sequence is :
..
GCCACTTGTC ATCGTCCTTC ATGTCGTGAA AGTGACGCTC CCGTCAACAT
GCTCGATGAG ACGGTAAGAG CGGAACAGCA GTGCAAAGTA TA
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wmc(22f3)
Plate reference : 22f3
WMC locus number : WMC Length of sequence : 84
Last updated : Mer 10 F思 1999 at 11:32
Owner : Bright, Zeneca Date at Agrogene : 24.12.98 Public Domain : Yes
Comments : Trimmed top insert at 5' end, 3' linker corrupted. Bases 1 to 84 show homology to 22f2 bases 1 to 84 (84 in longest run, maxScore = 72). No substantial microsatellite. Duplicate, 22f2 has precedence.
PCR Comments :
Length of sequence : 84 Consensus sequence is :
..
GGGTAAGATG GACAAGAACG CCTGGCACGG TGTCTGGCAT GAAAGGCTAG
ATGAACAACA CATCAAGTAC GCAGCTAAGG ACGC
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wmc(22g3)
Plate reference : 22g3
WMC locus number : WMC Length of sequence : 173
Last updated : Mer 10 F思 1999 at 11:48
Owner : Bright, Zeneca Date at Agrogene : 24.12.98 Public Domain : Yes
Comments : Trimmed to insert at both ends. Bases 9 to 133 show homology to 1G5 bases 71 to 195 (125 in longest run, maxScore = 65). (GT)3 52 to 57, (GT)5 60 to 69, (GT)5 74 to 83, (GT)6 86 to 97, (GT)13 112 to 137. Too difficult to make primers.
PCR Comments :
Length of sequence : 173 Consensus sequence is :
..
CGTGGACTAC TTTTCCTCAC CCAGGATGAC GAATAGTCAA CCCCTATATG
CGTGTGTGCG TGTGTGTGTA TGCGTGTGTG TGTCTGTGTG TGTGTGTTAA
TTATTAAAAA TGTGTGTGTG TGTGTGTGTG TGTGTGTGCG AGGAGGTGGG
GGAGGGGTAG GCAGAGGCCT AAC
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