3. Pathogenic Disease/Pest Reaction⌂ Home
3.1. Abiotic Stress Responses: Dehydrin-response Element Binding Factors⌂ Home
DREB proteins are a large family of transcription factors induced by abiotic stresses. Using genomespecific primers as probes for an orthologous Dreb1 gene series was placed on chromosomes 3A, 3B and 3D {10729}. SNPs in DREB-B1 permitted mapping in chromosome 3BL in the ITMI (Opata 85 / W7984) mapping population. See also section 2.2.42.
DREB A1 . 3A {10729}.
| Chromosome | 3BL |
| Marker associations | Xmwg818-3B – 27.3 cM – Dreb-B1 – 11.2 cM – Xfbb117-3B {10729}. |
| Varieties | Opata 85 {10729}. |
3.2. Reaction to Barley Yellow Dwarf Virus⌂ Home
Disease: Barley yellow dwarf; Cereal yellow dwarf
BDV1
| Chromosome | 7D |
| Chromosome | 7DS |
| i | Jupeteco 73R (compared to Jupeteco 73S) {1363}. |
| Varieties | Anza {1379}; Condor BW3991 {1379}; Tyrant BW3872 {1379}; Hahn BW4097 {1379}; Parrot BW10817{1379}; Siren BW18643 {1379}; Many CIMMYT genotypes. |
Note: BW = CIMMYT wheat accession number.
BDV2
| Note | Derived from Th. intermedium 7D = T7DS-7Ai# |
| Chromosome | 1S |
7Ai#1L group.7DL = T7DS.7DL7Ai#1L {
0182}, {
552}.
BDV3
| Note | Derived from Th. intermedium cv. Ohahe {10158} |
| Chromosome | 7DS |
3.3. Reaction to Bipolaris sorokiniana⌂ Home
Diseases: Spot blotch and common root rot. Spot blotch
The pathogen harbours Tox A in common with Parastagonospora nodurum , Parastagonospora avenaria tritici and Pyrenophora tritici-repentis {11255, 11768}.
SB1
| Note | Partial resistance |
| Chromosome | 7DS |
| i | HUW234Ltn+ {10855}. |
| Varieties | Saar {10856}; Lines with Lr34/Yr18/Pm38/Sr57 - see Reaction to Puccinia triticina , Reaction to Puccinia striiformis , Reaction to Blumeria graminis , Reaction to _Puccinia |
| Marker associations | Pleiotropic or closely linked with Lr34/Yr18/Pm38/Sr57 located between Xgwm1220-7DS and Xswm10-7DS (1.0 cM interval) {10856}; see also Reaction to Puccinia triticina , Reaction to |
| c | Putative ABC transporter {10648}. |
SB2
| Note | QSb.bhu-5B {11255}. |
| Chromosome | 5BL |
| Chromosome bin | 5BL1-0.55-0.75. |
| Varieties | Ning 8201 {11255}; Yangmai 6 {11255}; YS116 {11255}. |
| Marker associations | Xgwm639-5B – 1.4 cM – Sb2 – 0.06 cM – Xgwm1043-5B {11255}. |
SB3
| Chromosome | 3BS |
| Chromosome bin | 3BS8-0.78 -1.00. |
| Varieties | Line 621-7-1 {11256}. |
| Marker associations | Sb3/XWGGC3959 were mapped to a 2.2 cM interval between Xbarc133/Xbarc147/Xcfp30-3B/XWGGC5911 and XWGGC4320 {11255}; XWGGC12798 – 0.08 cM – SB3XW GGC9893/XWGGC10235 – 0.07 cM – XWGGC6119 |
SB4
| Chromosome | 4BL |
| Varieties | Line 7H9094 {11592}. |
| Marker associations | YK12831 – 1.18 cM – SB4/YK12828 – 0.01 cM – YK13104 {11592}. Line 7H909 was selected from a segregating F4 line from a cross of |
QTL
Yangmai 6 (R)/Sonalika (S): RIL population: AUDPC was controlled by four QTLs derived from Yangmai 6, viz.
QSb.bhu-2AL (
Xbarc353-2A –
Xgwm445-2A , R[2] =0.148),
QSb.bhu-2BS (
Xgwm148-2B –
Xgwm375-2B , R[2] =0.205),
QSb.bhu-5BL (
Xgwm67-5BL –
Xgwm371-5BL , R[2] =0.386) and
QSb.bhu-6DL (
Xbarc173-6D –
Xgwm732-6DL , R[2] =0.225) {
10719}.
3.4. Reaction to Blumeria graminis DC.⌂ Home
Disease: Powdery Mildew.
Resistance genes and their molecular associations are reviewed in {10141}.
PM1
| Synonym | Mla {348}, Pm1 {130}, Mlt {1175} |
| Chromosome | 7AL |
| Chromosome | 7A |
| i | Axminster/8[*] Chancellor {132}; CI 14114 = As II/8[*] Chancellor {132}; CI 13836/8[*] Chancellor {132}; Kenya C6041/5[*] Federation {1168}; Norka/8[*] Chancellor {132}. |
| Sources / synonyms | CS[*] 5/Axminster 7A {1293}. |
| Varieties | Anfield {98}; As II {130}; Axminster {1175,130}; Birdproof {165}; Bonus {1554}; CI 13836 {130}; Converse {1175}; Fedka |
| Varieties | MocZlatka {562}. |
| Synonym | Pm18 {853}, {562} |
| Varieties | Blaukorn {0011}; M1N {562},{1628}; M1N was described as an undesignated subline of Weihenstephan M1{540}. |
| Marker associations | AFLP marker 18M2 was diagnostic for Pm1c {0011}. |
| Varieties | T. spelta var duhamelianum TRI2258 {562}. |
| Marker associations | AFLP marker 18M1 – various Pm1 alleles 0.9 cM {0011}. |
**PM2** TraesCS5D01G044600 {
11503}.
| Note | Putatively derived from Agropryron cristatum |
| Synonym | PmPB3558 {11049}, PmKM2939 {11049} |
| Chromosome bin | C-5DS1-0-0.63. |
| Varieties | KM2939 {11049}; PB3558{11075}. |
| Marker associations | Xscar112 – 0.5 cM – Pm2b – 1.3 cM – Xscar203/Xmag6176/Xcfd81-5D {11049}; Xcfd81-5D – 5.5 cM – PmPB3558 – 3.9 cM – Xbwm25 – 0.9 |
| Synonym | PmNM {11061} |
| Chromosome | 5DS |
| Chromosome bin | 5DS-1-0-0.63. |
| Varieties | Niaomai {11061}. |
| Marker associations | Xcfd81-5D – 0.4/0.1 cM – Pm2c – 7.5/4.9 cM – Xcfd78-5D {11061}. |
| Deleted | Identified as Pm2a {11503}. |
Several alleles of
Pm2 with wheat and alien origins have been reported in Chinese genotypes – see temporary designations. The complex nature of temporarily named powdery mildew resistance genes in the
Pm2 region is discussed in {
11380}. Several alleged alleles at the
Pm2 locus are likely
Pm2a {
11503}.
| Note | PM3 has 92.9% identity with PM8 at the protein level {11398}.
Pm3a {130}, {132}. |
| Synonym | Mla {1168} |
| Chromosome | 1A |
| Note | [ Mlk {434}, Ml-k {540}, {10405}. 1° {1628}. |
| Varieties | Axona {0313}; Cornette {0313}; Herold {540}; Indian 4 {0313}; Kadett {0313}; Kanzler {0011}; Kleiber {0313}; Kolibri {540, 542, |
| Varieties (alt.) | Kadett Pm4b {540}; Turbo Pm4b {540}. |
| c | Sequence AY9398881 {10292}. DQ251488, DQ517518 {10405}. |
| Varieties | Sydney University Accession W150 = AUS 6449 {939, 1628}. |
| Varieties (alt.) | Cortez Pm5 allele {10843}. |
| Marker associations | Pm3e – 7.1 cM – Xwmc818-1A {10843}. |
| i | Michigan Amber/8[*] Chancellor {1628}; This allele was distinguished from Pm3c with only one of 13 pathogen cultures. |
| Varieties | Viza {10843}. |
| c | Sequence DQ071554 {10292}. |
| Synonym | Mlar {854} |
| Chromosome | 1AS |
| Chromosome | 1A |
| Varieties | Avo{1629}; Aristide{1629}; Champetre {0313}; Courtot {1629}; Lutin {0313}; Oradian {0313}; Rubens {0313}; Soissons {0313}; Valois {0313}. |
| Marker associations | Pm3g – 5.2 cM – Gli-A5 – 1.9 cM – Gli-A1 {0070}; Pm3g was completely linked to microsatellite Xpsp2999 {313}. |
| c | Sequence DQ251489, DQ517919 {10405}. |
The
Pm3a, Pm3b, Pm3d and
Pm3f alleles form a true allelic series based on sequence analysis {
10292}. Following the cloning and sequencing of
Pm3b {
10064}, 6 other alleles were sequenced {
10405}. The Chinese Spring (susceptible) allele,
Pm3CS , considered to be ancestral and present in many hexaploid and tetraploid wheats, was also transcribed {10405, 10406}. Other wheats possessed a truncated sequence (e.g. Kavkaz), or were null {
10405,
10406}. Unique markers were developed for all 8 transcribed alleles, and for individual alleles {
10405}.
Alleles
Pm3b, Pm3d , and
Pm3f were detected in Scandinavian varieties using allele-specific markers {
10681}.
TraesSYM2A03G00828360 {
11774}.
| Synonym | Pm4 {131} |
| Chromosome | 2AL |
| i | CI 14123 = Khapli/8[*] Chancellor {131}; CI 14124 = Yuma/8[*] Chancellor {131}. |
| Varieties | Aikang 58 {11753}; Steinwedel[*] 2/Khapli {939}; Yangmai 10 {10176}; Yangmai 11 {10176}. |
| Type varieties | Khapli {131}; Valgerado {97}; Yuma {131}. |
| Marker associations | Co-seg with Xbcd12312A.2 & Xcdo678-2A using F2s{864}; Xbcd1231-2A.1 – 1.5 cM – Pm4 – 1.56 cM – Xbcd292-2A {864}; Pm4a – 3.5 cM – AFLP |
| c | Similar structure to Pm4b {11525}. |
| Note | [ Pm23 {1618}] 2AL {10583} – earlier reported on |
| Chromosome | 5AL |
| Varieties (alt.) | 81-7241 Pm8 suppressed{1618, 10583}. |
| Marker associations | Xbarc122-2 – 1.4 cM – Pm4c – 3.5 cM – Xgwm356-2 {10583}. Pm4b and Pm4c are identical at the nucleotide level {11774}. |
| Chromosome | 2AL |
| Chromosome bin | 2AL1-0.85-1.00. |
| Varieties | GR18-1 {11701}; SYMattis {11525, 11775};. Tianmin 668 {11702}; Tm27d2 = WW St2022/Tm27//Amor = TRI 29584 {10744}. |
| dv | T. monococcum Tm27 {10744}. v: ma: A 218 bp fragment was amplified with STS marker ResPm4 as were other Pm4 alleles {10744}, Located within the |
| Chromosome | 2AL |
| Varieties | D29 {11317}. |
| Marker associations | Xgdm93-2A – 4.9 cM – Pm4e/Xstsbcd1231 – 1.8 cM – Xhbg327-2A {113017}; Xwgrc763-2A – 0.13 cM – Pm4e/Xwgrc872-2A/Xwgrc869-2A – 0.58 cM – Xwgrc982-2A_ , a |
A recessive resistance gene (
pmXXM {
11661}) in Xiaomaomai had a similar protein structure to
Pm4d ,
Pm4e and
Pm4h {
11661}.
Pm4f . v: WATDE0571 {
11775}.
Pm4g . v: WW-740 {
11775}.
Pm4h . v: WW-474 {
11774}.
Pm4i . v: WATDE0048 {
11775}.
Pm4j . v: WATDE0592 {
11775}.
Add note at end of
Pm4 section: Some variants of
PM4 confer resistance to wheat blast {11632, 11735, 11775} – see Reaction to
Magnaporthe grisea .
TraesCS7B02G441700 (susceptible allele) (chr7B: 706.811-706.816 Mb) {
11533}.
| Note | Pm5a was transferred to hexaploid wheat from T. dicoccum via Hope and H-44. Recessive. |
| Synonym | Pm5 {787}, mlH {771} |
| Chromosome | 7B |
| Chromosome | 7BL |
| i | Hope/8[*] Chancellor = CI 14125{570}. |
| Sources / synonyms | CS[*] 6/Hope 7B {964}, {771}. |
| Varieties | Alidos {854}; Aotea {964}; Caldwell {786}; Ga 1123 {786}; Galaxie {0257}; Glenwari {964}; Hardired {786}; Hope {964}; H-44 |
| Varieties (alt.) | Arthur Pm6 {786}; Coker 983 Pm6 {786}; Double Crop Pm6 {786}; Granada Pm8 {541}; Saar Pm38 Pm39 {10481}; Sensor Pm8 {541}. |
| c | GenBank MK955160. |
| Synonym | Mli {558}, {540} |
| Varieties | Aquila{96, 541}; Carimulti {541}; Cariplus {541}; Cucurova {0257}; Dolomit {541}; Falke {541}; Flanders {96}; Fruhprobst {0257}; |
| Varieties (alt.) | Bert Pm6 {541}; Boxer Pm4b {541}; Crossbow Pm2 Pm6 {98}; Kristall Pm8 {541}; Mission Pm4b {1531, 541}; Parade Pm2 Pm6 |
| c | GenBank MK955159. |
| Chromosome | 7B |
| Varieties | T. sphaerococcum cv. Kolandi {0257}. |
| Chromosome | 7B |
| Chromosome bin | 7BL 0.86-1.00 {10542}. |
| i | IGV 1-455 = CI 10904/7[*] Prins {0257}; CI 10904/7[*] Starke {0257}. |
| Varieties | Dream {10542}. |
| Marker associations | Xgwm611-7B – 2.1 cM – Pm5d – 2.0 cM – Xgwm577-7B – 1.0 cM – Xwmc581-7B {10542}. c Same sequence as Pm5e {11533}. |
| Note | Recessive and hemizygous effective {0258}; usually dominant {11708}. [ mlfz {0259}]; PmAL11 {11708}. |
| i | H962R {11707). |
| Varieties | AL11 {11708}. Baiyouyantiao (previously published as PmBYYT {11533}); Fuzhuang 30 {0258}; Hongquanmong (previously published as PmH {11533}; Mazhamai (previously published as Mlmz {11533}); Tangmai 4 |
| Marker associations | Xgwm1267-7B – 6.6 cM – Pm5e – 12.6 cM – Xubc405 628 -2B {0258}. KASP marker AL11-K2488 {11708}. |
| c | Identified as a CC-NBS-LRR {11533}. GenBank MK955156. |
Although Duanganmang (
PmDGM ) had an identical sequence and UTR to
Pm5e , a second completely linked gene was postulated to account for a different response pattern to the
Pm5e control {
11705}.
pm5.
PM6
| Synonym | Mlf {626} |
| Chromosome | 2B |
| i | CI 13250/7[*] Prins {0069}; CI 12559/8[*] Prins {0069}; Eight Prins derivatives {10576}; PI 170914/7[*] Prins 6 NILs based on Prins {0139, 0069}. |
| Varieties | 1969 IVGS Line |
C {
626}; Abe {
97,
1256}; Coker747 {786, 1079}; Mengavi {
97}; Oasis {
786}; Timgalen {
98}; TP 114/2[*] Starke deriv. B {
626}.
PM7
| Note | Derived from S. cereale cv. Rosen. 4BL {270}, {271}, {389} = T |
| Chromosome | 4BS |
4BL-5RL {
543}, but more recently revised to T4BS.4BL-2R#IL {
389}, {
380}.
PM8
| Note | Derived from Petkus rye - see Yr9, Lr26, Sr31 . |
| Chromosome | 1BL |
| Chromosome | 1RS |
1R(1B).
PM9
| Chromosome | 7AL |
| Chromosome | 7A |
| Varieties | N14 {562}. |
| Varieties (alt.) | Anfield Pm1a {1287}; Mephisto Pm1a Pm2 {540}; Normandie Pm1a Pm2 {347}; Pompe Pm1a {1287}; Ring Pm1a {1287}. |
PM10
| Chromosome | 1D |
| Varieties | Norin 4 {1482}; Norin 26 {1482}; Norin 29 {1482}; Penjamo 62 {1482}; Shinchunaga {1482}. |
| Varieties (alt.) | T. spelta duhamelianum Pm11 {1481}. Pm10 was detected using a culture derived from a hybrid of B. g. tritici and B. g. agropyri . |
PM11
| Chromosome | 6BS |
| Varieties | Chinese Spring {1481}; Salmon {1481}; T. compactum No. 44 {1481}. |
| Varieties (alt.) | T. spelta duhamelianum Pm10 {1481}. Pm11 was detected using a culture derived from a hybrid of B. g. tritici and B. g. agropyri |
PM12
| Note | Derived from Ae. speltoides .
The earlier location of 6A {1017} was not correct. 6B = 6BS- |
| Chromosome | 6SS |
PM13
| Note | Derived from Ae. longissima accession TL01.
T |
| Chromosome | 3BL |
3BS-3S[1] #1S.
PM14
| Chromosome | 6B |
| Varieties (alt.) | Akabozu Pm10Pm15 {1478}; Kokeshikomugi Pm15 {1478}; Norin 10 Pm15 {1478}. |
Pm14 and Pm15 were detected using hybrids between B. g. tritici and B. g. agropyri cultures.
PM15
| Chromosome | 7DS |
| Varieties (alt.) | Akabozu Pm14 {1478}; Chinese Spring Pm11 {1478}; Kokeshikomugi Pm14 {1478}; Norin 4 Pm10 {1478}; Norin 10 Pm14 {1478}; Norin 26 Pm10 |
Pm14 and Pm15 were detected using hybrids between B. g. tritici and B. g. agropyri cultures.
PM16
| Chromosome | 4A |
| Chromosome | 5B |
| Varieties | Line 70281 = Norman/*3 Beijing 837 {10217}; Norman lines with resistance from T. dicoccoides CL1060025{1201}. |
| Type varieties | T. dicoccoides CL1060025 {1201}. |
| Marker associations | Pm16 – 5.3 cM – Xgwm159-5B {10217}. |
To account for the different chromosome locations a 4A-4B translocation was suggested {
10217}. Based on the 5B location and similar disease responses
Pm16 and
Pm30 may be the same {
10217}.
PM17
PM19
| Chromosome | 7D |
| Varieties | T. durum 'Moroccos 183'/ Ae. tauschii AE 457/78 {853}. |
| Varieties (alt.) | Synthetic XX186 Pm2 {853}. |
| dv | Ae. tauschii {853}. |
PM20
PM21
| Note | 6AS = T |
| Chromosome | 6AL |
6VS#2 {1177, 11714}.
Deleted.
Pm22 . Deleted, renamed as Pm1e
Deleted.
Pm23 . Deleted, Renamed as Pm4c .
PM24 . TraesCS1D02G058900; AET1Gv20142700. This locus is also named RMG1 ( RWT4 ) – see Reaction to Magniporthe grisea .
| Synonym | Pm24a {571}, Pm24b {10994}, WTK3 {11414} |
| Chromosome | 6D |
| Chromosome | 1DS |
| Chromosome bin | 1DS5-0.54-1.00. |
| Varieties | Baihulu {10994, 11414}; Chiyacao {571}; Hongmangmai {11414}; Hulutou {11413, 11414}. |
| Marker associations | Xgwm789-1D/Xgwm603-1D – 2.4 cM – Pm24/Xgwm1291-1D – 3.6 cM – Xbarc229-1D {10109, 10957}; Xgwm789/Xgwm603-1D – 2.4 cM – Pm24 – 6 cM – Xbarc229-1D {10109, |
| c | Pm24 encodes a tandem kinase protein with putative pseudokinase domains. The gene was designated Wheat Tandem Kinase 3 ( WTK3 ) – this gain of |
PM25
| Synonym | PmTmb {1344, 1343} |
| Chromosome | 1A |
| Varieties | PI 599035 = NC94-3778{1344}. |
| Varieties (alt.) | NC96BGTA5 = Saluda[*] 3/PI 427662 Pm3a {1343}. |
| dv | T. monococcum PI 427662 {1343}. |
Linked with 3 RAPDs, the nearest, OPAG04950, at 12.8 +/- 4.0 cM {
1343}; Associated with 3 RAPDs {
1344}.
PM26
| Note | Recessive {0001}. |
| Chromosome | 2BS |
| Sources / synonyms | Bethlehem[*] 8/ T. turgidum var. dicoccoides 2BS {0001}. |
| Type varieties | T. turgidum var. dicoccoides TTD140 {0001}. |
| Marker associations | Co-segregation with Xwg516-2B {0001}. |
PM27
| Note | 6B (6B-6G) {0002}. |
| Varieties | Line 146-155-T {0002}. |
| Type varieties | T. timopheevii var. timopheevii K- 38555 {0022}. |
| Marker associations | 6BS...... Xpsr8/Xpsr964-6B – Pm27 – Xpsr154/Xpsr546-6B ......6BL {0002}; Cosegregation with Xpsr3131-6B {0002}. |
PM28
| Chromosome | 1B |
| Varieties | Meri {0022}. |
PM29
| Note | Derived from Ae. ovata . |
| Chromosome | 7DL |
| Varieties | Pova {0129}. |
| Marker associations | Location confirmed by cosegregation with molecular markers {0129}. |
PM30
| Note | [ MIC20 ] |
| Chromosome | 5BS |
| Varieties | 87-1/C20//2*8866 Seletion {0163}. |
| Marker associations | Pm30 – 5.6 cM – Xgwm159-5B {0163}. Pm30 could be the same as Pm16 {10217}. |
PM31 Deleted. This gene designation {
0301} is not valid; subsequent studies {
10918} showed the gene is
Pm21 .
| Synonym | mlG {0301} |
| Chromosome | 6AL |
| Varieties | G-305-M/781//3*Jing411 {0301}. |
| Type varieties | T. dicoccoides G-305-M {0301}. |
| Marker associations | cent.... Pm31 – 0.6 cM – Xpsp3029.1-6A – 2.5 cM – Xpsp3071-6A {0301}. |
PM32
| Note | Derived from Ae. speltoides {10025}. 1B= |
| Chromosome | 1BL |
| Chromosome | 1SS |
| Varieties | L501 = Rodina*6/ Ae. speltoides {10025}. |
PM33
| Synonym | PmPS5B {10205} |
| Chromosome | 2BL |
| Varieties | Am9 = T. carthlicum PS5/ Ae. umbellulata Y39 {10205}. |
| tv2 | T. carthlicum PS5 PmPS5A {10205}. |
| Marker associations | Xgwm536-2B – 18.1 cM – Pm33 – 1.1 cM – Xwmc317-2B – 1.1 cM – Xgwm111-2B – 1.8 cM – Xgwm383-2B {10205}. |
PM34
| Chromosome | 5DL |
| Varieties | PI 604033 = NC97BGTD7 = Saluda*3/ Ae. tauschii TA2492 {10241}. |
| dv | Ae. tauschii TA2492 {10241}. |
| Marker associations | Xbarc177-5D – 5.4 cM – 2.6 cM – Xbarc144-5D {10241}. |
PM35
| Chromosome | 5DL |
| Varieties | NC96BGTD3 = PI 603250 = Saluda*3/TA2377 {10342}. |
| dv | Ae. tauschii ssp. strangulata TA2377 {10342}. |
| Marker associations | Xcfd26-5D – 11.9 cM – Pm35 {10342}. |
PM36
| Chromosome | 5BL |
| Chromosome bin | 5BL6-0.55-0.76 {10356}. |
| Type varieties | MG-FN14999, a durum backcross line 5BIL-29 {10356}; T. turgidum ssp. dicoccoides MG29896 {10356}. |
| Marker associations | Xcfd7-5B – 10.7 cM – Pm36 – 0.8 cM – EST BJ261636 – 8.9 cM – Xwmc75-5D {10356}; 5BIL-42 identified as the derivative with shortest |
PM37
| Chromosome | 7AL |
| Varieties | PI 615588 = NC99BgTAG11 = Saluda*3/PI 427315{10372}. |
| Type varieties | PI 427315 = T. timopheevii ssp. Ameriacum {10372}. |
| Marker associations | Pm37 (PmAG11) was about 15 cM proximal to a cluster of markers that earlier co-segregated with Pm1 {10372}; A cross indicated linkage between Pm37 |
A further gene derived from
T. monococcum PI 427772 was identified in BCBGT96A = PI 599036 = Saluda*3/PI 427772 {
10479}. A single resistance gene was identified on chromosome 7AL in hexaploid germplasm NC96BGT4 (a
T. monococcum derivative). This gene was proximal to
Pm1 and considered to be different from
Pm37 , although possibly allelic {
10274}.
**PM38** TraesCS7D03G0183600
| Note | Adult plant resistance |
| Chromosome | 7DS |
| i | RL6058 = Tc*6/PI 58548{10374}. |
| Varieties | Lines with Sr57/Lr34/Yr18 . |
| Varieties (alt.) | Saar Pm5a Pm39 {10481}. |
| Marker associations | Xgwm1220-7D – 0.9 cM – Lr34/Yr18/Pm38 – 2.7 cM {10374}. |
| c | ABC transporter; See Lr34 . This gene is identical to Yr18, Sr57, Lr34 and Ltn and confers stem rust resistance in some genetic backgrounds; see |
PM39
| Note | Adult plant resistance |
| Chromosome | 1BL |
| i | Avocet-R+Lr46/Yr29 = AvocetR*3//Lalb mono 1B*4/Pavon 76 {10480}. |
| Varieties | Genotypes with Lr46/Yr29 ; see Reaction to Puccina |
triticina , Reaction to P. striiformis .
PM40
| Note | Derived from Th. intermedium {10539}. Pm40 was not derived from Th. intermedium {11710}. |
| Chromosome | 7BS |
| Chromosome bin | C-7BS-1-0.27. |
| Varieties | GRY19 {10539}; Partial amphiploid TAI7047 {10539}; Yu {10539}; PI 672538 {11710}; Yu24 {10539}. |
| Marker associations | Xwmc426-7B – 5.9 cM – Xwmc3347B – 0.2 cM – Pm40 – 0.7 cM – Xgwm297-7B – 1.2 cM – Xwmc364-7B {10539}; Xwmc-7B – 0.58 |
| c | TraesCS7B01G164000 , an NLR with an additional NBS region was identified as a candidate {11711}. |
PM41
| Note | Derived from T. dicoccoides . |
| Chromosome | 3BL |
**bin:
PM42
| Note | Derived from T. dicoccoides. Recessive. |
| Chromosome | 2BS |
| Chromosome bin | 2BS-0.75-0.84. |
| Varieties | P63 = Yanda 1817/G303-1M/3*Jing 411 {10559}. |
| Type varieties | T. dicoccoides G303-1M {10559}. |
| Marker associations | BF146221 – 0.9 cM – Pm42 – Xgwm148-2B {10559}. |
PM43
| Note | Derived from Th. intermedium . |
| Chromosome | 2DL |
| Varieties | Line CH5025 = 7621696/TAI7045//2*Jing 411 {10560}; Partial amphiploid TAI7045 {10560}. |
| al | Th. intermedium Z1141 {10560}. |
| Marker associations | Xwmc41-2D – 2.3 cM – Pm43 – 4.2 cM – Xbarc11-2D {10560}. |
PM44
| Chromosome | 3AS |
| Varieties | Hombar {10790}. |
| Marker associations | Flanked by SSR markers distally located in chromosome arm 3AS {10790}. CURATOR’S NOTE : This gene nane was based on a pre-publication request; the publication |
PM45
| Synonym | Pm57-6D {10790} |
| Chromosome | 6DS |
| Varieties | Line NWG0099 {10791}. |
| Varieties (alt.) | D57{10791}. |
| Marker associations | Close linkages are reported in the draft manuscript. |
PM46
| Note | Partial resistance. |
| Chromosome | 4DL |
| Chromosome bin | Distal to break point 0.56 FL{10678}. |
| i | RL6077 = Thatcher*6/PI250413 {10847,10678}. |
| Varieties | Chapingo 48 {11070}. |
| Marker associations | Pleiotropic or closely linked with Lr67/Yr46/Sr55/Ltn3 and aassociated with Xgwm165-4D and Xgwm192-4DL {10847, 10678}. |
| c | This multiple disease resistance locus was identified as a hexose transporter most similar to the STP13 family and containing 12 predicted transmenbrane helices {11070}. |
PM47
| Note | Reccessive. |
| Synonym | PmHYLZ {10912} |
| Chromosome | 7BS |
| Chromosome bin | 7BS1-0.27-1.00. |
| Varieties | Hongyanglazi {10912}. |
| Marker associations | Xgpw2119-7B – 7.5 cM – BE606897 – 1.7 cM – Pm47 – 3.6 cM ascob – Xgwm46-7A {10912}. |
PM48
| Note | Identified as Pm2a {11678}. |
| Synonym | Pm46 {10935} |
| Chromosome | 5DS |
| Chromosome bin | 5DS1. |
| Varieties | Tabasco {10935}. |
| Marker associations | Xgwm205-5D – 17.6 cM – Pm48 – 1.3 cM – Xmp510(BE498794) – 1.8 cM – Xcfd81-5D {10935}. |
PM49
| Synonym | Ml5323 {10937} |
| Chromosome | 2BS |
| Chromosome bin | 2BS-0.84-1.00. |
| Type varieties | T. dicoccum MG5323 {10937}. |
| Marker associations | Xcau516-2B – 7.2 cM – Pm49 – 4.1 cM – XCA695634 {10937}. |
PM50
| Chromosome | 2AL |
| Chromosome bin | C-2AL1-0.85. |
| Varieties | K2 TRI29907 {10942}. |
| Type varieties | T. dicoccum M129 {10942}. |
| Marker associations | Xgwm294-2A – 2.9 cM – Pm50 {10942}. K2 is a backcross derivative of German winter wheat cv. Alcedeo with T. dicoccum accession M129 as donor |
PM51
| Note | Putative Th. ponticum derivative. |
| Synonym | PmCH86 {11026} |
| Chromosome | 2BL |
| Chromosome bin | 2BL60.89-1.00. |
| Varieties | CH7086 {11026}. |
| Marker associations | Xwmc332-2B – 3.2 cM – Pm51 – 1.5 cM – BQ246670 {11026}. |
PM52
| Synonym | MlLX90 {11028, 11029} |
| Chromosome | 2BL |
| Chromosome bin | 2BL-0.35-0.50. |
| Varieties | DH51302 {11715}; Jimai 22 {11714}; Liangxing 99 {11028, 11029, 11716}; Shimai 26 {11715}. |
| Marker associations | Xcfd73-2B – 5.3 cM – Xwmc441-2B – 0.2 cM – XBE604758 – Pm52 – 2.9 cM – Xgwm120-2B {11028}; XBE604758 – 5.5 cM _– Xics34 |
PM53 Curator’s note: A publication of this gene could not be located.
| Note | Derived from Ae. speltoides . |
| Synonym | PmNC-S16 {11045} |
| Chromosome | 5BL |
| Varieties | NC09BGTS16, PI669386 = Saluda*3/TAU829 {11045}. |
| al | Ae. speltoides TAU829 {11045}. |
| Marker associations | Xwmc759/Xgwm499-5B/IWA6024 – 0.7 cM – Pm53 – IWA2454 – 5.9 cM – Xgwm408-5B {11045}. |
PM54
| Synonym | PmA2K {11050} |
| Chromosome | 6BL |
| Chromosome bin | 6BL-0.450-1.00. |
| Varieties | AGS2000 PI612956 {11050}. |
| Marker associations | Xgpw2344-6B – 1.00 cM – wPt-9256 – Pm54 – 1.2 cM – Xbarc134-6B {11050}. |
PM55
| Note | Derived from Dasypyrum villosum . |
| Synonym | Pm5VS {11108, 11109} |
PM56
| Note | Derived from S. cereale . 6AS (T |
| Chromosome | 6AL |
PM57
| Note | Derived from Ae. searsii . 2BL (T2BS·2BL-2S[S] #1) {11159}. |
| Varieties | Line 89-346, TA5108{11159}; Line 89(5)69, TA5109 {11159}; Line898(6)88 {11728}; TA5109 {11728}. |
| ad | BCS+2S[S] #1 TA3581 {11159}. |
| c | Encodes a tandom kinase with putative kinase-pseudokinse domains followed by a von Willebrand domain and orthologue of Lr9 (88.3% amino acid similarity) {11728}. Line 89-346 |
PM58
| Note | Derived from Ae. tauschii . |
| Synonym | PmTA1662 {11171} |
| Chromosome | 2DS |
| Varieties | U6714-A-011, PI 682090 {11320}; U6714-B-056, PI 682089 {11320}. |
| dv | Ae. tauschii TA1662 {11171}. |
| Marker associations | Cosegregation with KASP[TM] markers K-TP331370, KTP338253, K-Tp15990 and K-Tp313873 {11171}. Cosegregating marker Xkasp68500 developed from AET2Gv20068500 distinguished TA1662 from random common wheat accessions {11749}. |
PM59
| Synonym | Pm181356 {11214} |
| Chromosome | 7AL |
| Chromosome bin | 7AL15-0.00-1.00. |
| Varieties | PI 181356 {11214}. |
| Marker associations | Xwmc525-7A – 1.8 cM – Xmag1759 – 0.5 cM – Pm18156 – 5.7 cM – Xmag1714 – 20.0 cM – Xcfa2257-7A {11214}. |
PM61
| Chromosome | 4AL |
| Chromosome bin | 4AL4-0.8-1.00. |
| Varieties | Xuxusanyuehuang {11290}. |
| Marker associations | Xgwm1604A – 0.23 cM – Pm61 – 0.23 cM – Xicsx79 {11290}. Pm61 was considered to be at a different locus to MlIW30 , a |
PM62
| Note | [ Pm2VL {11321}.] Adult-plant resistance. 2BS·2VL#5 {11321}. |
| Varieties | NAU1823 {11321}. |
| Marker associations | X2L4g9P4/Hae111 {11159}. |
PM63
| Note | Pm628024 {11331}. |
| Chromosome | 2BL |
| Chromosome bin | 2BL6-0.89-1.00. PI 628024 {11331}. |
| Varieties | PI 628024 {11331}. |
| Marker associations | Xwmc175-2B – 1.7 cM – Xstars419-2B – 0.6 cM – Pm63 – 1.1 cM – Xbcd135.2 – 2B ; 710.3 – 723.4 in the CS |
PM64
| Synonym | PmWE35 {11346} |
| Chromosome | 2BL |
| Chromosome bin | 2BL4-0.5-0.89. |
| Varieties | WE35 {11346}. |
| Type varieties | T. dicoccoides G-573-1 {11346}. |
| Marker associations | Xwmc175-2B – 1.12 cM – Pm64/Xgwm47-2B – 2.18 cM – Xwmc332-2B {11346}. Complete repulsion linkage with Yr5 in 644 F3 lines {11346}. |
PM65
| Synonym | PmXM208 {11356} |
| Chromosome | 2AL |
| Varieties | Xinmai 208 {11356}. |
| Marker associations | Xhbg327-2A – 4.4 cM – XresPm4/XTaAetPR5 – 0.6 cM – PmXM208 – 1.6 cM – Xbarc122-2A {11356}. An allelism test of Pm65 and Pm4a showed |
PM66
| Note | 4BS (4BL[.] 4S[l] #7S) {11364}. |
| Varieties | TA3465 {11364}. |
| al | Ae. longissima (unknown accession). |
| Marker associations | 4S[l] S markers developed in {11364}. |
PM67
PM68
| Chromosome | 2BS |
| Chromosome bin | 2BS-0.84-1.00. |
| Type varieties | T. durum TRI 1796 {11466}. |
| Marker associations | Xdw04 (TRITD2Bv1G010030, chr2B:21587671-21591163) – 0.22 cM – PM68 – 0.22 cM – Xdw12 (TRITD2Bv1G010880, chr2B:23374401-23375310) – 3.0 Mb – PM26/Xcau516-2B (TRITD2Bv1G012960, chr2B:26398438-26414596) – 36.8 cM |
PM69
| Note | PmG3M {11302}. |
| Chromosome | 6BL |
| Chromosome bin | 6BL-0.7-1.00. |
| Varieties | Ruta + Pm69 {11627}. |
| itv | Svevo + Pm69 {11627}. |
| Type varieties | T. dicoccoides G-305-3M {11302, 11627} TD116180 (University of Haifa Wild Cereal Gene Bank), CGN19852 (Netherlands Centre for Genetic Resources) {11541}. |
| Marker associations | Xgpw7262-6B – 6.9 cM – PM69 ( PmG3M ) – 4.5 cM – Xedm149-6B {11302}. |
| c | Pm69 comprises RxN with RanGAP interaction sites, NB-ARC, and LRR domains {11627}. GenBank KY825226.1. Collinearity analyses indicated homoeology with SR13_ {11627}. |
| Chromosome | 1AS |
| Varieties | Wheats with Gli-A1a {1209} including CS; Lists in {1208}, {491, 108}. |
Pm8 was suppressed when locus
Pm3 is transcribed (including Chinese Spring and Thatcher which have no currently detectable
Pm3 resistance alleles) {
10828}.
| Chromosome | 2DL |
| Varieties | 2DL-2M[b] L translocation lines. |
| ad | CS + 2M[b] TA7733 {11662}. |
| Marker associations | Mapped to a FL 0.49 – 0.667 region containing 19 2Mb-specific markers {11662}. |
PMTR1 & **PMTR3I.** SECCE6Rv1G0382290 .
PmTR1 &
| Chromosome | 6RS |
| Varieties | TR1 and TR3 were described as stable wheat lines derived from different triticale sources; TR1 had post-seedling (‘age-dependent’) resistance and TR3 had all stage resistance. |
| c | These genes were shown to be allelic and the different responses were attributed to differences in expression {11686}. Both proteins had similarity to Pm12 and |
| Note | Derived from Ae. longissimum . 6A and |
| Chromosome | 6B |
| ad | CS + 6S[l] #3 TA7548 {11597}. |
| Varieties | T27 (Ti6AS.6AL-6S[l] #3-6AL) {11597}; R43 (T6BS.6BL-6S[l] #3[l] #3 {11597}. |
| al | Ae. longissimum TA1910 (11597). |
| Marker associations | Mapped to a distal 6S[l] #3 interval of 42.8 Mb flanked by markers Ael58410 and Ael5799 {11597). |
Pm6S[l] conferred resistance to 28 of 30 Chinese
Bgt isolates {
11597}.
| Chromosome | 5DS |
| Chromosome bin | 5DS-0-0.63. |
| Varieties | 10V-2 {11380}. |
| Marker associations | Xbwm255D/Xswgi066-5D – 1.2 cM – Pm10V-2/ several markers – 1.2 cM – Xcfd-5D {11380}. |
| Chromosome | 7DS |
| Varieties | Arina {11291}. |
| Marker associations | Xpsr160-7D – 1.3 cM – Xgwm350a-7D – 4.7 cM – PmAF7DS – 9.9 cM – Xbarc184/Xgwm111-7D {11291}. |
Three of 61 Israeli Bgt isolates were avirulent: all three isolates were from tetraploid wheat accessions. It is possible that the gene may be present in many common wheat accessions.
| Chromosome | 5BL |
| Chromosome bin | 5BL14-0.75-0.76. |
| Varieties | N9134 {10926}; N9738{10927}. |
| Type varieties | T. dicoccoides AS846 {10926}. |
| Marker associations | XMAG2498-5B – 1.3 cM – Pm36/XBJ261635 – 1.1 cM – PmAS846 – 1.3 cM – XFCP1-5B {10927}. |
| Note | 1BS= |
| Chromosome | 1BL |
| Chromosome | 1RS |
| Varieties | Chuannong 17 {10686}. |
| al | S. cereale R14 {10686}. |
| Note | Recessive. |
| Chromosome | 7BL |
| Varieties | Dahongtou S761 {11447}. |
| Marker associations | XBE443877/Xwmc526-7B – 0.8 cM – pmDHT – 0.8 cM – Xgwm611/Xwmc581-7B – 0.9 cM – XBF473539/Xgwm577-7B – 0.9 cM – Xgwm577-7B {11447}. |
| Chromosome | 6BL |
| Chromosome bin | 6BL-0.7-1.00. |
| Type varieties | T. dicoccoides G-305-3M {11302}. |
| Marker associations | Xgpw-6B – 13.6 cM – PmG3M – 3.5 cM – Xuhw213-6B – 5.7 cM – Xedm149-6B {11302}. |
| Chromosome | 5DS |
| Varieties | Jimai 23 {11445}. |
| Marker associations | Xytu3004 – 0.7 cM – PmJM23/Xytu201/Xbwm21/Xcfd81-5D – 1.8 cM – Xswgi068/Xbwm20 {11445}. |
| Chromosome | 7AL |
| Chromosome bin | 7AL16 0.86-0.90. |
| Type varieties | T. dicoccoides G18-16 {10886}. |
| Marker associations | Xgwm1061/Xgwm344-7A – 1.2 cM – PmG16/wPt-1424/wPt6019 – 2.4 cM – wPt0494/wPt9217/Xwmc809-7A {10886}. |
| Chromosome | 3BL |
| Varieties | Zhoumai 22 {10706}. |
| Marker associations | Xgwm108-3BL – 10.3 cM – PmHNK – 3.8 cM – Xwmc291-3BL {10706}. |
| Chromosome | 2AL |
| Chromosome bin | 2AL1 C-0.85. |
| Varieties | Zheng9754{10897}. |
| Marker associations | Xgwm372-2A – 5.0 cM – PmHNK54 – 6.0 cM – Xgwm312-2A {10897}. |
| Chromosome | 2AL |
| Varieties | Mv Hombar {11176}. |
| Marker associations | XwPt-665330 – 0.3 cM – PmHo – 0.1 cM – XwPt-3114 {11176}. |
| Chromosome | 4AL |
| Varieties | Honghuaxiaomai {11565}. |
| Marker associations | Located in a 1.77 Mb (0.18 cM) region flanked by Xkasp475200 and Xhnu522 {11565}. |
| Chromosome | 2BL |
| Varieties | KN0816 {11598}. |
| Marker associations | Mapped to a region of chromosome carrying Pm6 , Pm33 , Pm51 , Pm64 and PmQ but distinguished from each other by specificity {11598}. |
v: LS5082 {
11629}. ma: Located in the interval 710.3 – 711.0 Mb {
11629}.
| Note | PmLX66 was allelic with Pm2 {11162}. |
| Chromosome | 5DS |
| Varieties | Liangxing 66 {11162}. Identified as Pm2a {11503}. |
| Note | Resistance is recessive {10476, 10477}. |
| Chromosome | 2AL |
| Varieties | Lankao 90(6)2112 {10476}; Zhengzhou 9754{10476}. |
| Marker associations | TacsAetPR5-2A/Pm4 – 3.9 cM – Xgwm265-2A – 3.72 cM – Pm39 – 6.15 cM – Xgdm93-2A {10476, 10477}; TacsAetPR5-2A was converted to an STS marker |
| Chromosome | 3AS |
| dv | T. monococcum Line NJ3946 {11677}; PI 191097 = TA2032 {11677}. |
| Marker associations | Xbarc294-3A – 1.1 cM – PmNJ3946 – 0.8 cM – Xwgrc5153-3A {11677}. |
| Chromosome | 4AL |
| Varieties | PBDH {11647}. |
| Marker associations | Mapped to a 3.2 cM interval, 719.1-726.2 Mb (CS RefSeq 1.0) {11647}. Cytology failed to detect a putative Agropyrum cristatum segment in PBDH {11647}. |
| Chromosome | 2AL |
| Varieties | AM4{10205}. |
| tv2 | T. turgidum subsp. carthlicum pS5 Pm33 {10205}. |
| Marker associations | Xgwm356-2A - 10.2 cM - PmPS5A ; PmPS5A is located at or near the Pm4 locus{10205}. |
| Note | Recessive. |
| Varieties | Hongxinmai {11461}. |
| Marker associations | Xstars419-2B – 0.6 cM – Xicsq405 2B – 0.8 cM – PmQ – 0.2 cM – XWGGBH913-2B {11461}. PmQ is very close to Pm51, Pm63 |
| Chromosome | 2AS |
| Varieties | Line XQ00508 {11734}. |
| Marker associations | Located to 226.7 kb interrval {11734}. All F2 plants in crosses with lines having Pm26 (1,226 plants), Pm42 (1,198 plants) and Pm26 (1,583 plants) were |
| Note | Recessive. |
| Chromosome | 7BL |
| Varieties | Shangeda {11453}. |
| Marker associations | SNP2-58 – 0.4 cM – PmSGD – 0.8 cM – SNP2-46 {11453}. |
| Chromosome | 7AL |
| Chromosome bin | 7AL 18-0.90-1.00. |
| dv | T. boeoticum PAU5088 PmTb7A.2 {11130}. |
| Marker associations | Mapped to a 4.3 region flanked by wPt4553 and Xcfa2019-7A {11130}; Estimated to be 46 cM proximal to Pm1 {11130}. |
| Chromosome | 7AL |
| dv | T. boeoticum PAU5088 PmTb7A.1 {11130}. |
| Marker associations | Mapped to a 0.8 cM region flanked by MAG1759 and MAG2185b in the region of Pm1 {11130}. |
| Chromosome | 7BL |
| Chromosome bin | 7BL10-0.78-1.00. |
| Varieties | Tanmai4 {10961}. |
| Marker associations | Xgwm611-7B – 7.0 cM – PmTm4 – 14.6 cM – Xest92 – 2.9 cM – Xbarc1073/Xbarc82-7B {10961}; XWGGC6892 – 0.6 cM – PmTm4/XWGGC5746 – 0.03 |
| Note | Recessive. |
| Chromosome | 4BL |
| Chromosome bin | 4BL5-0.85-1.00. |
| Varieties | Tian Xuan 45 {11374}. |
| Marker associations | Ax-110673642 – 3.0 cM – PmTx45 – 2.6 cM – ILP4B01G266900 {11374}. |
| Chromosome | 7AL |
| dv | UR206 {11251}. |
| Marker associations | Xwmc273-7A – 2.2 cM – PmU – 3.8 cM – Xpsp3003-7A {11251}. PmU was transferred to, and was effective in, common wheat. |
| Note | PmW14 is allelic with Pm2 {11162}. |
| Chromosome | 5DS |
| Varieties | Wennong 14 {11162}. Identified as Pm2a {11503}. |
| Note | Derived from Thinopyrum intermedium . |
| Chromosome | 2BS |
| Chromosome bin | 2BS-0.84-1.00. |
| Varieties | WE99. |
| Marker associations | Pmwe99 – 10.4 cM – Xgwm148-2B – 3.1 cM – Xbarc55-2B {11162}. GISH failed to detect alien chromatin. |
| Note | Reccessive. |
| Chromosome | 2AL |
| Chromosome bin | 2AL1-0.58-1.00. |
| Varieties | Xiaohongpi {11009}. |
| Marker associations | Xhbg327-2A – 0.6 cM – Pmx/Xsts-bcd1231 – 8.9 cM – XresPm4/Xgpw4456-2A {11009}. This gene and close markers showed distorted segregation ratios and some discrepancy of |
| Note | 2U(2B) {10367}. |
| su | Laizhou 953*4/Am9 (Am9 = Ae. umbellulata Y39/ T. turgidum ssp. carthlicum PS5) {10367}. |
| dv | Ae. umbellulata Y39 {10367}. |
| Marker associations | Associated with 2U markers Xgwm257, Xgwm296 and Xgwm319 {10367}. |
| Chromosome | 2AL |
| Varieties | Yumai 66 {10619}. |
| Marker associations | XKsum193-2A – 2.4 cM & 3.6 cM – PmYm66 {10619}. |
| Chromosome | 5BL |
| Chromosome bin | 5BL 0.59-0.76. |
| Type varieties | T. dicoccoides I222 {10892}. |
| Varieties | 3D232 {10892}. |
| Marker associations | Xwmc415-5B – 1.3 cM – Ml3D232 – 3.3 cM – CJ832481 {10892}; Co-segregation with 8 EST markers including an NBS-LRR analogue {10892}. |
| Chromosome | 2BL |
| Chromosome bin | 2BL6 0.89-1.00. |
| Varieties | NC97BGTAB10, PI 604036 {10873}. |
| Type varieties | T. dicoccoides PI 471746 {10873}. |
| Marker associations | Xwmc445-2B – 7 cM – MlAB10 {10873}. |
| Varieties | Adlungs Alemannen {854}. |
| Varieties | Bretonischer Bartweizen {854}. |
| Chromosome | 4B |
| Varieties (alt.) | Halle 13471 Pm2 {96}; H8810/47 Pm2 {96}; Maris Dove Pm2 {96}. |
| Type varieties | T. durum line {96}. |
| Varieties | Garnet {854}; Many old German cultivars {854}. |
| Note | Pm24 {11414}. |
| Chromosome | 1DS |
| Varieties | Hulutou {11257}. |
| Marker associations | Xgwm-1D – 1.7 cM – Xwggc3026 – 1.5 cM – MlHLT – 2.1 cM – Xwggc3148 – 4.0 cM – Xcfd83-1D {11257}. |
| Note | See Pm60. |
| Chromosome | 7AL |
| Chromosome bin | FL 0.86 {10545}. |
| Type varieties | T. dicoccoides IW72 {10545}. |
| Marker associations | Xmag1759-7A – 8.2 cM – MlIW72 – 3.3 cM – Xmag2185-7A – 1.6 cM – Xgwm344-7A {10545}. |
| Synonym | MLIW30 {11289} |
| Chromosome | 4AL |
| Chromosome bin | Line 2L6 {11289}. |
| Varieties | Line 2L6 {11289}. |
| Type varieties | T. dicoccoides IW30 {11289}. |
| Marker associations | Xbarc78-4A – 1.00 cM – XB1g2020.2 – 0.1 cM – MlIw30 – 0.1 cM – XB1g2000.2 – 2.6 cM – Xgwm350-4A {11289}. |
| Chromosome | 2BS |
| Chromosome bin | 2BS3-0.84-1.00 {10921}. |
| Type varieties | T. dicoccoides IW170 {10921}. |
| Marker associations | XcauG2 – 0.6 cM – MlIw170/Xcfd238-2B – 2.15 cM – XcauG8/BF201235/Xwmc243-2B {10921}; Iw1 – 18.77 cM – MlIw170 {10921}. This gene is located in |
| Chromosome | 7AL |
| Chromosome bin | 7AL-16-0.86-0.90. |
| Type varieties | T. dicoccoides IW172 {11095}. |
| Marker associations | WGGC4664/WGGC4665/WGGC4668 – 0.44 cM – MlIW172 – 0.7 cM – WGGC4659 {11095}. |
| Note | Recessive, hemizygous-effective {0339} |
| Chromosome | 7B |
| Varieties (alt.) | Jieyan 94-1-1 Pm8 {0339}. |
| Chromosome | 7AL |
| dv | T. monococcum TA2033 {10393}. |
| Marker associations | Xmag1757/Xmag2185 – 2.7 cM – Mlm2033/Xmag2185 – 1.3 cM – Xgwm344-7A {10393}; Xmag1757 – 5.9 cM – Mlm2033/Xmag2185/Xgwm344/Xgwm146-7A – 4.7 cM – Xmag1986 {10393}; Xmag1757/Xmag1714/Xmag1759 |
| Chromosome | 7AL |
| dv | T. monococcum ssp. aegilopoides M80 {10393}. |
| Marker associations | Xmag1757/Xmag1759 – 3.6 cM – Mlm80 – 0.7 cM – Xmag2166/Xgwm344-7A {10393}; Xwggc4655 – 0.29 cM – Mlm80 – 0.57 cM – Xwgrc253/Xwgrc271 {11190}. Mlm2033 |
| Chromosome | 4AL |
| Type varieties | T. turgidum ssp. dicoccoides NFS10 {11666}. |
| Marker associations | Located to a 0.3 cM interval of 2.1 Mb (729275816-731365462) in CS refseq 1.0 {11666}. Considered to be located at a different locus to Pm61 |
| Chromosome | 7DS |
| Chromosome bin | 7DS4-0.61-1.00 {11004}. |
| Varieties | NC96BGD1 PI597348 {11004}; Saluda*3/TA2570 {11004}. |
| Marker associations | Xgwm635-7D – 5.5 & 8.3 cM – MlNCD1 – 16.2 cM & 13.6 cM – Xgpw328-7D {11004}. |
| Note | Reccesive |
| Chromosome | 7AL |
| Varieties | RD30 {10175}; TA2682c {10175}. |
| Marker associations | Xgwm344-7A – 1.8 cM – mlRD30 – 2.3 cM – Xksuh9-7A {10175}. |
TA2682c carries a second dominant gene located in chromosome 1A {
10175}.
| Chromosome | 6AL |
| Varieties (alt.) | RE714 Pm4b {0142, 1220}. |
| Type varieties | T. dicoccum 119 {1220}. Mlre showed a residual effect on the quantitative expression of APR in the presence of B. graminis pathotypes considered virulent |
| Note | Recessive, hemizygous-effective {0339} |
| Chromosome | 7B |
| Varieties | Siyan 94-2-1 {0339}. |
| Note | Derived from Aegilops neglecta. |
| Chromosome | 7AL |
| Chromosome bin | 7AL15-0.99-1.00. |
| Varieties | NC09BGTUM15 {11216}. |
| al | Ae. neglecta TTCC 223 {11216}. |
| Marker associations | Xwmc525-7A / IWA8057 – 0.7 cM – Xcfa2257-7A – 0.4 cM – MlUM15 – 0.8 cM – Xcfa2240-7A – 2.8 cM – Xmag2185 – 3.4 |
| Chromosome | 2BS |
| Varieties | WE74 {11589}. |
| Type varieties | T. dicoccoides G-748-M {11589}. |
| Marker associations | Mapped to a 799.9 kb region corresponding to physical region 25.48-26.28 in CHr2Zavitan v2.0 (26.5927.01 in IWGSC RefSeq v1.0) {11589}. The relationship to Pm26_ and |
| Note | Recessive and hemizygous-effective {0258} |
| Chromosome | 7B |
| Varieties | Xiaobaidong {0258}. |
| Type varieties | T. dicoccoides 1055 {10029}. |
| Chromosome | 2BS |
| Varieties | WE74 = YD1817/G-748-M//7*ND01 {11665}. |
| Type varieties | T. dicoccoides G-748-M {11665}. |
| Marker associations | Co-segregated with WGGBD425 {11665}.Located in the same region as Pm26, MlIW170 , and MlWE74 {11665}. |
| Synonym | MLZec {10127} |
| Chromosome | 2BL |
| Varieties | Zecoi 1 = Ralle*3/ T. dicoccoides Mo49 {10127}. |
| Type varieties | T. dicoccoides Mo49 {10127}. |
| Marker associations | Distally located in chromosome 2BL {10127}; Xwmc356-2B – 2.0 cM – PmZec1 {10127}. |
| Chromosome | 2AL |
| Chromosome bin | 2AL1-0-0.85. |
| Varieties | Line 92145E8-9 {11436}. |
| Marker associations | Xwmc181-2A – 9.3 cM – Xsdauk682-2A – 2.8 cM – Ml92145E8-9 – 0.8 cM – Xsdauk-2A – 18.7 cM – Xgwm356-2 {11436}. |
| Chromosome | 1A |
| Varieties | Forno/ T. spelta var. Oberkulmer mapping population; the resistance was contributed by Oberkulmer {0051}. |
| Marker associations | Associated with Xpsr1201-1A and Xpsr941-1A {0051}. |
| Chromosome | 1B |
| Varieties | Forno/ T. spelta var. Oberkulmer mapping population; the resistance was contributed by Forno {0051}. |
| Marker associations | Associated with Xsfr3(LRR)-1B and Xpsr593-1B {0051}. |
| Chromosome | 1D |
| Varieties | Forno/ T. spelta var. Oberkulmer mapping population; the resistance was contributed by Oberkulmer {0051}. |
| Marker associations | Associated with Xpsr168-1D and Xglk558-1D {0051}. |
| Chromosome | 2A |
| Varieties | Forno/ T. spelta var. Oberkulmer mapping population; the resistance was contributed by Oberkulmer {0051}. |
| Marker associations | Associated with Xpsr380-2A and Xglk293-2A {0051}. |
| Chromosome | 2D |
| Varieties | Forno/ T. spelta var. Oberkulmer mapping population; the resistance was contributed by Oberkulmer{0051}. |
| Marker associations | Associated with Xpsr932-2D and Xpsr331-2D {0051}. |
| Chromosome | 3A |
| Varieties | Forno/ T. spelta var. Oberkulmer mapping population; the resistance was contributed by Forno{0051}. |
| Marker associations | Associated with Xpsr598-3A and Xpsr570-3A {0051}. |
| Chromosome | 3D |
| Varieties | Forno/ T. spelta var. Oberkulmer mapping population; the resistance was contributed by Oberkulmer {0051}. |
| Marker associations | Associated with Xpsr1196-3D and Xsfr2(Lrk10)-3D {0051}. |
| Chromosome | 4A |
| Varieties | Forno/ T. spelta var. Oberkulmer mapping population; the resistance was contributed by Forno {0051}. |
| Marker associations | Associated with Xgwm111-4A and Xpsr9344A {0051}. |
| Chromosome | 4A |
| Varieties | Forno/ T. spelta var. Oberkulmer mapping population; the resistance was contributed by Forno {0051}. |
| Marker associations | Associated with Xmwg710-4A and Xglk128-4A {0051}. |
| Chromosome | 4B |
| Varieties | Forno/ T. spelta var. Oberkulmer mapping population; the resistance was contributed by Forno {0051}. |
| Marker associations | Associated with Xpsr593-4B and Xpsr1112-4B {0051}. |
| Chromosome | 4D |
| Varieties | Forno/ T. spelta var. Oberkulmer mapping population; the resistance was contributed by Forno {0051}. |
| Marker associations | Associated with Xglk302-4D and Xpsr1101-4D {0051}. |
| Chromosome | 5A |
| Varieties | Forno/ T. spelta var. Oberkulmer mapping population; the resistance was contributed by Oberkulmer {0051}. |
| Marker associations | Associated with Xpsr644-5A and Xpsr945-5A {0051}. |
| Chromosome | 5A |
| Varieties | Forno/ T. spelta var. Oberkulmer mapping population; the resistance was contributed by Oberkulmer {0051}. |
| Marker associations | Associated with Xpsr1194-5A and Xpsr918-5A {0051}. |
| Chromosome | 5B |
| Varieties | Forno/ T. spelta var. Oberkulmer mapping population; the resistance was contributed by Oberkulmer {0051}. |
| Marker associations | Associated with Xpsr580-5B and Xpsr143-5B {0051}. |
| Chromosome | 6B |
| Varieties | Forno/ T. spelta var. Oberkulmer mapping population; the resistance was contributed by Forno {0051}. |
| Marker associations | Associated with Xpsr167-6B and Xpsr964-6B {0051}. |
| Chromosome | 7B |
| Varieties | Forno/ T. spelta var. Oberkulmer mapping population; the resistance was contributed by Forno {0051}. |
| Marker associations | Associated with Xpsr593-7B and Xpsr129-7B {0051}. |
| Note | This QTL corresponds to Pm5 {0051}. |
| Chromosome | 7B |
| Varieties | Forno/ T. spelta var. Oberkulmer mapping population; the resistance was contributed by Forno{0051}. |
| Marker associations | Associated with Xglk750-7B and Xmwg710-7B {0051}. |
| Chromosome | 2BS |
| Varieties | Opata/W-7984 (ITMI) RI mapping population {2055}; Resistance was contributed by Opata {0255}. |
| Marker associations | Associated with Xcdo405-2B and Xmwg950-2B {0255}. |
| Chromosome | 4B |
| Varieties | Opata/W-7984 (ITMI) RI mapping population {0255}; Resistance was contributed by W-7984 {0255}. |
| Marker associations | Associated with Xcdo795-4B and Xbcd1262-4B {0255}. |
| Chromosome | 7DS |
| Varieties | Opata/W-7984 (ITMI) RI mapping population {0255}; Resistance was contributed by Opata {0255}. |
| Marker associations | Associated with Xwg834-7D and Xbcd1872-7D {0255}. |
| Chromosome | 4AL |
| Varieties | DT4AL-TM Line 8.1 {11154}. |
| Type varieties | T. militinae (AAGG) {11154}. The 7G segment carrying this resistance likely replaces most of the 7BS segment known to be part of chromosome 4A {11154}. |
| Note | Recessive |
| Chromosome | 2DL |
| Varieties | SE5785, Snipe/Yav79//Dack/Teal/3/ Ae. squarrosa 877 {11084}; NO7728-1 {11084}; NO7728-2{11084}. |
| Marker associations | Xbarc59-2D – 3.6 cM – PmSe5785 – 4.6 cM – Xwmc817-2 {11084}. Bainong 64(R) / Jingshuan 16(S). DH lines: Four QTL from Bainong 64: |
Xbarc148-1A –
Xgwmc550-1A interval. R[2] =0.074-0.099;
QPm.caas-4DL proximal to
Xwmc331-4D . R[2] =0.15-0.23;
QPm.caas-6BS , proximal to
Xbarc79-6BS , R[2] =0.09-0.13; and
QPm.caas-7AL , proximal to
Xbarc174-7AL , R[2] =0.067-0.071 {
10680}.
Additional temporarily named genes and QTL are listed in {
11655}.
3.6. Reaction to Cephus spp. See also Stem solidness.⌂ Home
Pest: Wheat stem sawfly. North American species C. cinctus ; European species C. pygmeus . Resistance to wheat stem sawfly is associated with solid stem (see also: Stem solidness). Tetraploid wheat
3.7. Reaction to Cochliobolus sativus Ito & Kurib.⌂ Home
Disease: Cochliobolus root rot. CRR
| Note | Recessive. |
| Chromosome | 5BL |
| Varieties | Apex {764}; Cadet {765}. |
3.8. Reaction to Colletotrichum cereale⌂ Home
RCC1
| Chromosome | 5AL |
| Varieties | Chinese Spring {10939}; Norin 4 {10939}; Shinchunaga {10939}. |
| Marker associations | Xbarc165-5A – 1.2 cM – Rcc1 – 12.8 cM; Xgwm671-5A – 0.7 cM – Xwmc415-5A {10939}. |
Susceptibility to this non-pathogen of common wheat is rare, with only one susceptible genotype being documented. A few susceptible tetraploid genotypes were identified {
10939}.
3.9. Reaction to Diuraphis noxia (Mordvilko)⌂ Home
Insect pest: Russian aphid, Russian wheat aphid.
DN1
| Chromosome | 7DS |
| Chromosome | 7D |
| Chromosome bin | 7DS-0.36-0.73 {11225}. |
| i | Betta-Dn1:PI 634768 {0211, 0004, 10277}; Caledon {0004}; Gariep {0004}; Karee-Dn1 {0211}; Limpopo-Dn1 {0004}; TugelaDn1:PI591932 {0211, 0004, 10277}. |
| Varieties | PI 137739 {286}. |
| Marker associations | Xgwm111-7D 210 – 3.20 +/- 0.20 cM – Dn1 {0211}. |
VIGS silencing of
5AL-B4 on chromosome 5A compromised resistance conferred by
Dn1 suggesting a decoy role {
11333}.
Tests of allelism indicated that
Dn1, Dn2, Dn5, Dn6, and
Dnx and four uncharacterized lines were identical or closely linked {
11225}.
DN2
| Chromosome | 7DL |
| Chromosome | 7DS |
| i | Betta-Dn2:PI 634769 {286}, {10277}; Karee-Dn2:PI 663774 {286}, {10277}; Tugela-Dn2: PI 634772 {286} ,{10277}. |
| Varieties | PI 262660 {286,863}. |
| Marker associations | XksuA1-7D – 9.8 cM – Dn2 {863}; Myburg et al. {9968} identified two SCAR markers that mapped 3.3 cM proximal to Dn2 {9968}; Xgwm111-7D |
According to Saidi & Quick {
1250},
Dn1 and
Dn2 are probably allelic. Reference stocks with each gene showed allelism with a gene in PI 262605.
DN3
| Note | Recessive. |
| Varieties | Ae. tauschii SQ24/ T. turgidum TD65{1086}. |
| dv | Ae. tauschii SQ24 {1086}. |
DN4
| Note | 1DL {863}, |
| Chromosome | 1DS |
| i | Yumar {10397}. |
| Varieties | Ankor {10397}; CORWAI {260}; CI 2401 {260}; Halt {0209}; PI 151918 {260}; PI 372129 {1250}; Prairie Red {10397}. |
| Marker associations | Xabc1561D – 11.6 cM – Dn4 {863}; Xgwm106-1D – 7.4 cM – Dn4 – 12.9 cM – Xgwm337-1D {0352}; Xgwm1061D – 5.9 cM – Dn4 |
Dn4 and an uncharacterized gene in PI 151918 were allelic or tightly linked {
11225}.
DN5
| Chromosome | 7D |
| Chromosome | 7DS |
DN6
| Chromosome | 7D |
| Chromosome bin | 2AL1-0.85-1.00. |
| Varieties | CI 6501 {260}; PI 243781 {1249,1250}. |
| Marker associations | Dn6 – 3.0 cM – Xgwm111 {352}. Xgwm44-7D – 11.6 cM – Xgwm111-7D – 3.0 cM – Dn6 {11225}. |
DN7
| Note | Derived from S. secale cv. Turkey 77 {9918} |
| Synonym | Dn2414 {10478} |
| Chromosome | 1R |
DN9
| Chromosome | 1DL |
| i | Betta-DN9:PI 634770 {10277}. |
| Varieties (alt.) | PI 294994 Dn5Dn8 {286}. |
| Marker associations | Xgwm642-7D 180 – less than 3.20 cM – Dn9 {286}. |
| Chromosome bin | 7DL-0.1-077. |
| Varieties | PI 682675 {11211}. |
| Marker associations | Xcfd14 -7D – 2.3 cM – Xgwm437-7D – 9 cM – Dn10 – 29.1 cM – Xwmc488-7D {11211}; Xcfd14 -7D – 3.6 cM – Xgwm437-7D |
Temporary designations
| Chromosome | 7DS |
| Varieties | PI 220127 {286}. |
| Marker associations | Xgwm111-7D 210 – 1.52 +/- 0.15 cM – Dnx {286}. Dnx was considered to be located at a locus different from Dn1, Dn2 or Dn5 |
| Chromosome | 7BS |
| Type varieties | Line 1881 {10145}. |
| Marker associations | Xgwm46-7BS – 10.1 cM – Dn1881 – 12.8 cM – Xgwm333-7BL {10145}. |
| Chromosome | 7DS |
| Varieties | CI2401, PI97812 {11078}. |
| Chromosome bin | 7DS-0.37-0.61 {11211}. |
| Marker associations | Xbarc214-7D – 1.1 cM – Dn2401 – 1.8 cM – Xgwm473 -7D {11078}. |
| Note | 7DS M19026}. |
| Varieties | IG 100695 {11226}. |
| Marker associations | Xgwm44-7D – 13 cM – Xcfd14 - 7D – 15.7 cM – Dn100695 . |
| Chromosome | 7DS |
| Varieties | PI 626580 {10981}. |
| Marker associations | Dn626580 – 1.8 cM – Xbarc214-7D – 3.2 cM – Xgwm473-7D – 3.2 cM – Xgwm473-7D {10981}. |
QTL
QTLs for antixenosis were associated with
Xpsr687-7D (7DS) and
Xgwm437-7D (7DL) in CS/CS (Synthetic 7D) {
10136}. Separate antibiotic effects were demonstrated for the same chromosome {
10136}. A QTL,
QDn.unlp.6A , for antixenosis was associated with
Xgwm1393-6AL and
Xgwm1150-6AL in a CS/CS(Synthetic 6A) DH population {
10216}.
3.10. Reaction to Eurygaster Integriceps⌂ Home
Sunn pest
EI1
| Chromosome | 4BS |
| Chromosome bin | 4BS4-C-0.27. |
| Marker associations | IWB73001 – Ei1/BS00022785 – IWB9610 {11201}. |
3.11. Reaction to Fusarium spp.⌂ Home
FHB1
| Synonym | QFhs.ndsu-3BS {9925}, {175} |
| Chromosome | 3BS |
| i | HC374/3*98B69-147 {10214}; Sumai 3*5/Thatcher {10214}. |
| Varieties | HC-147-126 {10444}; Rollag {11071}. |
| Varieties (alt.) | Alsen Fhb5 {11071, 11237}; BW278 Fhb2 {10225}; Carberry Fhb5 {11237 }; ND744 Fhb5 {11237}; ND3085 Fhb5 {11237}; Sumai 5 Fhb2 Fhb5 {10314, 11237}. |
| Marker associations | XSTS3B-80 – 0.2 cM – Fhb1 – 1.1 cM – XSTS3B-142 {10214}; Placed in a 1.2 cM interval flanked by XSTS3B-189 and XSTS3B-206 {10403}; |
| c | A pore-forming toxin-like gene product encodes a chimeric lectin with two agglutinin domains and an ETX/MTXZ toxin domain {11205}. |
The relationship of
Fhb1 to
Fhs1 or
Fhsb2 {
1096} is unknown. Lines combining
Fhb1 and
Sr2 are reported in {
11170};
Fhb1 is located about 2 cM proximal to
Sr2 . SYN1 / Ocoroni DH population: three
QTL from SYN1 were identified,
QFhs.cim-2D (PVE 25%),
QFhs.cim-7A (PVE 4.7%) and
Qfhs.cim-7A (PVE 4.2%) {
11165}.
A marker study found that 14 of 66 wheats with putative FHB resistance shared markers indicative of the 3BS QTL in Ning 7840, Sumai 3, Wangshuibai and possibly Wuhan 3, plus Japanese landraces Shinchunaga and Shirasu No 1 {
10115}. The original source may be the landrace 'Taiwan Wheat' rather than Funo {
10115}.
FHB2
| Chromosome | 6BS |
| Varieties | pbE85{10444}. |
| Varieties (alt.) | BW278 Fhb1 {10225}; Sumai 3 Fhb1 {10225}. |
| Marker associations | Xgwm133-6B – 4 cM – Fhb2 – 2 cM – Xgwm644-6B {10225}. The relationship of Fhb2 to Fhs1 or Fhs2 {1096} is unknown. |
FHB3
| Note | 7DS = T |
| Chromosome | 7AL |
FHB4
| Synonym | Qfhi.nau-4B {10282} |
| Chromosome | 4BL |
| Chromosome bin | 4BL5-0.86-1.00. |
| i | Mianyang 99323*4/Nanda 2419/Wangshibai {10885}. |
| Varieties (alt.) | Wangshuibai Fhb5 {10884}. |
| Marker associations | Located in a 1.7 cM segment flanked by Xhbg226-4B and Xgwm149/Xmag4580-4B {10883}. |
Although plants with
Fhb-4 were taller than the recurrent parent, the height difference was not associated with the
Rht-B1 locus {
10885}.
Type I resistance (% infected plants) in this cross was attributed to 10 chromosome regions among which
Qfhi.nau-4B (
Xwmc349-4B –
Xgwm149-4B - r[2 ] = 0.75),
XFhi.nau-5A (Xwmc96-5A –
Xgwm304-5A - R[2 ] = 0.27) and
Qfhi.nau-5B (Xgwm408-5B –
Xbarc140-5B ) from Wangshuibai were detected in at least 3 of 4 years {
10282}. A significant additive effect of QTL on 6D and 2A was also observed {
10282}.
FHB5
| Synonym | Qfhi.nau-5A {10282 }; Qfhs.ifa-5A {10076} |
| Chromosome | 5AS |
| Chromosome bin | C-5AS3-0.75. |
| i | Mianyan 99-323 and PH691 backcross derivatives selected for Qfhi.nau-5A {10896}. |
| Varieties (alt.) | Alsen Fhb1 {11237}; Carberry Fhb1 {11237}; ND744 Fhb1 {11237}; ND3085 Fhb1 {11237}; Sumai 5 Fhb1 Fhb2 {10314, 11237}; Wangshuibai Fh4b {10896}. |
| Marker associations | Mapped to a 0.3 cM interval between Xbarc117/Xbarc358/Xgwm293/Xgwm304-5A and Xgwm415-5A {10896}. |
Closely linked in coupling with
Qflw.nau-5A for narrow leaf width, but recombination is reported in {
11041}.
According to {
11487}
Fhb5 might be the same as
Qfhs.ifa-5Ac but the issue remained ambivalent.
FHB6
| Note | Derived from Elymus tsukushiensis syn. Roegneria kamoji |
| Chromosome | 1AS |
T1AL.1AS-1E[ts] #1S {
11048}
FHB7
| Note | Derived from Thinopyrum ponticum |
| Synonym | FhbLoP {11118} |
FHB8
| Chromosome | 7D |
| i | Wangshuibai/4*PH691 7D-NIL1 {11676}; Wangshuibai/4*PH691 7DNIL2 {11676}. |
| Varieties (alt.) | Wangshuibai Fhb1 Fhb2 Fhb4 Fhb5 {11676}. |
| Marker associations | Xwgrb1500 (93.9 Mb, RefSeq 1.0) – Fbhb8/Xwgrb1587 – Xwgrb1559 (96.5 Mb) {11676}. |
FHB9
| Note | QFhb-2DL {11719}. |
| Chromosome | 2DL |
| Varieties | Shi4185 / Shijiazhuang8 RIL92 (11727}; Ji5625 / Wheaton NILs {11719}. |
| Varieties (alt.) | Shi4185 + additional QTL in chr. 4A, 3D and 5D {11727}; Ji5625 {11719}. |
| Marker associations | Located in an 8.0 Mb (2.21 cM) region (KASP-525 – KAS-12056, 525.9 – 533.8, Mb, CS RefSeq 2.1) {11727}; 524.9 – 531.0 Mb {11719}. |
Other names
| Varieties | Line A {1096}. |
| Varieties (alt.) | Ning 7840 Fhs2 {1096}. |
| Varieties | Line B {1096}. |
| Varieties (alt.) | Ning 7840 Fhs1 {1096}. A major QTL was associated with several linked AFLP markers tentatively located in chromosome 7BL of Ning 7840 {0005}. |
QTL
QTLs for resistance to
Fusarium graminearum detected in the cross Renan/Recital {
10069}. All resistance alleles, except
QFhs.inra-3A , were contributed by Renan. LOD scores and percent of variation explained by the QT (R[2] ) are average of three years of field tests.
| Marker associations | Associated with Xgwm382c-2A (LOD=6.3, R[2] =14.4%). |
| Marker associations | Associated with Xgwm374-2B (LOD=7.6, R[2] =12%). |
| Marker associations | Associated with Xbcd372-3A (LOD=3.7, R[2] =6.2%). |
| Marker associations | Associated with Xgwm383b-3B (LOD=5.4, R[2] =10.5%). |
| Marker associations | Associated with Xpsr170a-5A (LOD=3.8, R[2] =5%). |
| Marker associations | Associated with Xgwm639b-5A 8LOD=6.6, R[2] =14%). |
| Marker associations | Associated with B1 (LOD=6.3, R[2] =8.5%). |
| Marker associations | Associated with Xcfd29-5D (LOD=4.4, R[2] =7%). |
| Marker associations | Associated with Xcfd42-6D (LOD=2.7, R[2] =6.6%). |
| Chromosome | 2AL |
| Varieties | Sumai 3/Stoa RI mapping population; the QTL was contributed by Stoa {9925}. |
| Marker associations | Association with RFLP XksuH16-2A (LOD >3) {9925,175}. |
| Chromosome | 3AS |
| Type varieties | T. turgidum var. dicoccoides. Recombinant substitution lines LDN and LDN(Dic-3A). The resistant allele was contributed by T. dicoccoides {372}. |
| Marker associations | Associated with Xgwm2-3A (explained 37% of the phenotypic variation){372}; QFhs.ndsu-3AS was placed within a 11.5 cM region flanked by TRAP marker loci Xfcp401-3A and Xfcp397.2-3A |
| Chromosome | 3BS |
| Varieties | Sumai 3/Stoa RI mapping population; the QTL was contributed by Sumai 3 {9925,0175}. |
| Marker associations | Association with Xbcd907-3B.2 (LOD >3) {9925} and microsatellite markers Xgwm1533-3B and Xgwm493-3B {0175}; QFhs.ndsu-3B from Sumai 3 was associated with microsatellite loci Xgwm533-3B and Xgwm274-3B |
This QTL explained 42% of the variation in Sumai 3/Stoa {
0175}.
Two additional QTL for resistance to
Fusarium graminearum were identified in the croSumai3/Stoa {
0175}. The QTL on 4BS was associated with
Xwg909-4B and the QTL on 6BS was associated with
Xbarc101-6B and
Xbcd1383-6B {
0175}. The QTL associated with markers
Xgwm493-3B/Xgwm533-3B (explaining 24.8 % of the variation), and
Xbarc101-6B/Xbcd1383-6B were also identified in a RIL population from the cross ND2603/Butte 86 {
0175}. In addition, one QTL on chromosome 3AL associated with
Xbcd941-3A and one on chromosome 6AS associated with
XksuH4-6A were identified in RILs from the cross ND2603/Butte 86 {
0175}.
Remus / CM-82036 (a Sumai 3 derivative): DH population: Resistance QTL on chromosome 3BS associated with
Xgwm493-3B and
Xgwm533-3B {
0240}. Additional QTL in this cross were detected on
chromosome 5A, associated with
Xgwm293-5A and
Xgwm304-5A , and possibly on 1B, associated with
Glu-B1 {
0240}.
Two major genes with additive effects were reported in crosses between Sumai 3 (resistant) and two susceptible cultivars {
0174}. One of the genes was assigned to 5AL based on linkage to the dominant awn suppressor
B1 (RF 15.1-21.4%).
Alve (S) / Line 685 R: DH population: QTL on chromosomes 4D (
Rht-D1 ), 3BS, 5A and 2BL {
10972}. Two resistance QTL were needed to counteract the negative effect of the
Rht-D1b semi-dwarfing allele {
10972}.
Arina (R) / Forno (S): Three QTLs,
QFhs.fal-6DL (R[2] =22%),
QFhs.fal-5BL.1 (in Forno, R[2] =14%) and
QFhs.fal.4AL (R[2] =10%) and 5 minor QTLs in 2AL, 3AL, 3BL, 3DS and 5DL were detected {
10172}.
Arina / Riband DH lines: QTL affecting ADUPC were identified in 1BL(2), 2B, 4DS, 6BL and 7AL (Arina), and 7AL and 7BL (Riband). The most effective was the 4DS QTL that appeared to be an effect of
Rht-D1a rather than height
per se {
10464}.
Baishanyuehuang (R) / Jagger (S): RIL population: Four genes/QTLs derived from the resistant parent included
Fhd1 (R[2] =0.16),
Qfhb.hwwg-3BS c (R[2] =0.09),
Qfhb.hwwg-3A (R[2] =0.05-0.08) and
Qfhd.hwwg-5A (R[2] =0.05 in one trial) {
10950}.
Cansas (moderately resistant) / Ritmo (susceptible): Map based analysis across environments revealed seven QTL,
QFhs.whs-1BS (1RS),
QFhs.whs-3B (not
Fhb1 ),
QFhs.whs-3DL, QFhs.whs-5BL '(renamed
Qfhs.lfl-1BL in {
10768})'
, QFhs.whs-7AL and
QFhs.whs-7BL (cumultatively, R[2] = 0.56). The chromosome 1D gene was primarily involved in resistance to fungal penetration and the others in resistance to spread {
10503}. There were significant correlations of FHB response with height and heading date {
10503}.
Qfhs.lfl-1BL was verified in F4:7 lines and detected in Biscay, History and Pirat {
10768}. The renamed
Qfhs.lfl-1BL reduced FHB severity by 42% relative to lines lacking it {
10698}. This gene was also present in Biscay, History and Pirat {
10698}.
CS / CS(Sumai 3 7A): QFhb7AC , nearest marker
Xwmc17-7A , explained 22% of phenotypic variance for Type II and 24% of phenotypic variance for Type III resistance {
10798}.
Chris / Frontana: In a reciprocal backcross analysis of Chris monosomics/Frontana, Frontana chromosomes 3A, 6A and 4D reduced visibly diseased kernels, kernel weight and DON content, whereas Frontana chromosomes 2A, 2B, 4B and 7A increased the same traits {
10398}. Further study of the 3A, 6A and 4D reciprocal substitution lines indicated that chromosome 3A of Frontana had the largest effect on incidence, severity, spread and kernel damage, 4D less so and 6A possibly not at all {
10900}.
DH181(R)(Sumai 3 / HY 386 Seln.): QTL identified in 2DS, 3AS, 3BS, 3B Cent. region, 4DL, 5AS, 6BS {
10213}.
Dream(R) / Lynx(S): RIL population: Following inoculation with
F. culmorum 4 QTL for AUDPC were identified on chromosomes 6AL (R[2] =19%), 1B (12%), 2BL (11%) and 7BS (21%). The resistance allele
in 1B came from Lynx and was associated with T1BL.1RS {
10260}.
Dream*4 / Lynx lines were developed by selection of QTL on chromosomes 6AL, 7BS and 2BL. Lines carrying
QFhs.lfl-6AL and
QFhs.lfl-7BS were more resistant than lines lacking them; the 2BL QTL effect was not verified {
10470}.
Chokwang (R) / Clark (S): Qfhb.ksu-5DL.1 associated with
Xbarc239-5D (R[2] =0.24) {
10276},
Qfhb.ksu4BL.1 associated with
Xbarc1096-4B (R[2] =0.13) {
10276}, and
Qfhs.ksu-3BS.1 marginally associated with the region of
Fhb1 (R[2] =0.1) {
10276}.Ernie (Res) / MO94-317 (Sus): 243 F8 RIL population. Four QTLs from Ernie detected as follows:
Qfhs.umc-2B , linked to
Xgwm278-2BS , R[2] = 0.04 {
10456};
Qfhs.umc-3B , linked to
Xgwm285-3BS , R[2] = 0.13 {
10456};
Qfhs.umc-4B , linked to
Xgwm495-4BL , R[2] = 0.09 {
10456}.
Qfhs.umc-5A , linked to
Xgwm165-5A , R[2] = 0.17 {
10456}. Evidence was provided to suggest the QTL acted additively {
10456}.
Frontana (R) / Remus (S): Major QTLs in chromosomes 3AL (
Xgwm270-3AL –
Xdupw227-3A region) and 5A (
Xgwm129-5A –
Xbarc-5A region) accounted for 16% and 9% of the phenotypic variation (mainly type 1 resistance) over 3 years {
10174}.
Frontana (MR) / Seri82 (S): F3 and F3:5 populations: QTLs were located in chromosomes 1BL (R[2] =7.9%), flanked by AFLP markers, 3AL (R[2] =7.7%), flanked by
Xgwm720-3A and
Xgwm121-3A , and 7AS (R[2] =7.6%), flanked by anAFLP and
Xgwm233-7A {
10349}.
G16-92 (R) / Hussar (S): Two QTL for resistance to
F. culmorum were identified on chromosome 1A (resistance from Hussar) (R[2] = 0.01) and 2B (resistance from G16-92) (R[2] = 0.14) {
10588}.
Glenn (R) / MN00261-4 (S): RIL population: three of 15 QTL for FHB response and heading date were stable and explained >10% of the phenotypic variation; these were located on chromosome arms 5BL, 6BS (possibly
Fhb2 ) and 7AS {
11568}.
Grandin (S) / PI277012 (I): DH population: Two QTLs,
Qfhb.rwg-5A.1 on 5AS (R[2] 0.06-0.2) and
Qfhb.rwg-5A.2 on 5AL (R[2] =0.12-0.2) conferred type I and II resistance and reduced DON content {
0147}. The new QTL on 5AL was closely but not completely linked with gene
q which is present in PI277012 {
10860}.
Hobbit Sib / T. macha
| Type varieties | Strongfield {10445}. |
| Marker associations | Spanning 16 cM, this QTL peaking on Xgwm552B explained 23% of the phenotypic variation {10445}. |
| Type varieties | T. turgidum var. carthlicum cv. Blackbird{10445}. |
| Marker associations | Spanning 23 cM and peaking on Xwmc397 this QTL accounted for 23% of the phenotypic variation {10445}. |
| Note | Associated mainly with resistance to fungal penetration {10073}. |
| Chromosome | 5A |
| Varieties | Remus/CM-82036 {10076}. |
| Marker associations | Associated with markers Xgwm293-5A, Xgwm304-5A, Xgwm1057-5A, Xbarc117-5A, Xbarc186-5A, Xbarc100-5A and Xbarc40-5A {10073}. Fine mapping divided this QTL into two components, Qfhs.ifa-5Ac located in the centromere |
| sutv | LDN-DIC 7A {10401}. |
| Type varieties | T. turgidum var. dicoccoides PI 78742 {10401}. |
| Marker associations | Located in an interval 39.6 cM thie QTL accounted for 19% of the phenotypic variation in a RIL population of Langdon/LDN-DIC 7A; nearest marker Xbarc121-7AL |
| sutv | LDN-DIC3A {10402}. |
| Type varieties | T. dicoccoides {10402}. |
| Marker associations | Located in an interval spanning 29.3 cM this QTL accounted for 37% of the phenotypic variation; peak marker, Xgwm2-3A {10402}. |
| Varieties | Alondra{10085}. |
| Marker associations | Located on 2DS between SSR markers Xgwm2962D and Xgwm261-2D {10085}. |
3.12. Reaction to Heterodera avenae Woll.., H. filipjeva (Madzhidov) Stelter⌂ Home
Cereal root eelworm; cereal cyst nematode.
CRE1
| Synonym | Cre {1388} |
| Chromosome | 2BL |
| Chromosome | 2B |
| i | AP = Prins[*] 8/AUS10894 {1579}. |
| Varieties | AUS 10894 {1056}; Beulah {10013}; Chara {10163}; Goldmark {10013}; Goroke {10013}; Kellalac {10013}; Loros CI 3779 {10013}; Mira {10163}; Mitre {10163}; Ouyen {10013}; RE8670 |
| Marker associations | Xglk605-2B - 7.3 cM - Cre1 - 8.4 cM - Xcdo588-2B/Xabc451-2B {1579}; A PCR-based assay was developed from Xglk605-2B {1580}; Co- |
segregation with
Xcsl107-2B . Four of 6 land varieties possessed
Xcsl107-2B . A variant haplotype of
Xcsl107-2B was present in AUS4930 {
10013};
Xcdo36-2B – 7.5 cM –
Xbcd1231-2B/XAtPPr5/Xcsl1072B/Cre1 {
10013}.
CRE2
| Note | Derived from Ae. ventricosa 10 {238}, {9991}. 6M[v ] {9991}. |
| Varieties (alt.) | H-93-8 Cre6 {238}. Although H-93-8 is a double M[v] (5A), 7M[v] (7D) substitution line, Cre2 was presumed to be located in a separate undetected translocated |
CRE3
| Synonym | CcnD1 {329}, Ccn-D1 {328} |
| Chromosome | 2DL |
| Varieties | Synthetic hexaploids {329}. |
| dv | Ae. tauschii accessions AUS 18912 {328}; AUS 18913 {328}; CPI 110809 {329}; CPI 110810 {328}. |
| Marker associations | Colinearity with 2BL for Xcdo-36-2D and XAtPPr5/Xbcd1231-2D/G4/G12/Cre3 (see Cre1 ) {10013}. |
CRE
| Synonym | Ccn-D2 {328}, CcnD2 {329} |
| Chromosome | 2D |
| dv | Ae. tauschii accessions AUS 18914 {329}; CPI 110813 {328}. |
CRE5
| Note | Derived from Ae. ventricosa {0107, 0009}. |
| Synonym | CreX {9, 0183}, QCre-ma2A {11394}. |
2AS {
0107} = 2A-2N[v] -6N[v] .
CRE6
| Note | Derived from Ae. ventricosa {0138}. |
| Chromosome | 5N |
| Varieties | H-9335 {0138}. |
| Varieties (alt.) | H-93-8 Cre2 {0138}. |
CRE7
| Note | Derived from Ae. triuncialis {0105}. |
| Synonym | CreAet {0105} |
| Varieties | TR353 derivatives {0105}. |
CRE8
6BL {
0220}, on basis of linkage with
Xbcd1-6B and
Xcdo347-6B {
220}.
CRE9
| Synonym | QCre-ma7D {11394} |
| Varieties | VPM-1/Moisson 951{11394}. v2 Madsen Cre5 {11394}; VPM-1 Cre5 {11394}. |
| Marker associations | Flanked by Xics7D-27-7D and BS00129645 {11394}. KASP markers BS00021745 , BS00150072 , and BS00154302 were developed {11394}. Cre9 conferred resistance to Chinese isolates of _H. |
Temporay designations
| Note | Derived from Ae. variabilis 2AS or |
| Chromosome | 2DS |
| ad | Line M {10487}. |
| Varieties | Line D {10486}. |
| Marker associations | RAPD markers OP021000, OpR41600, OpV3450 {10486}. |
| Note | Derived from Ae. variabilis |
| Chromosome | 3BL |
| Varieties | Line X {10487}. |
| Marker associations | Co-segregation with RAPD OpY161065 {0103} which was converted to SCAR16 {10486}. May be the same gene as Rkn-mn1 (see reaction to Meloidogyne naasi ). |
| Chromosome | 1AS |
| dv | T. monococcum Tm 14087 QCre.pau-2A {10749}. |
| Marker associations | QCre.pau-1A was mapped in a 3.6 cM interval in a T. boeoticum Tb 5088 / Tm 14087 RIL population and was flanked by Xcfa2153-1A and |
| Chromosome | 2AS |
| dv | T. monococcum Tm 14087 QCre.pau-1A {10749}. |
| Marker associations | QCre.pau-2A was mapped in a 4.00 cM interval flanked by BE498358 and Xwmc358-2A {10749}; R[2] =0.13{10749}. |
Qcre.src-1B was located to the
Xwmc719-1B (R[2] =12%) –
Xgwm140-1B (R[2] =12%) region in Trident/Molineux {
10343}.
For review {
11309}.
3.13. Reaction to Magnaporthe spp.⌂ Home
| Synonym | Rwt4 {0302} |
| Chromosome | 1D |
| Sources / synonyms | CS (Cheyenne 1D) {10462}. |
| v1 | Cheyenne {10462}; Norin 26 {10462}; Shin-chunaga {10462}. |
| Varieties (alt.) | Norin 4 Rmg6 {0302, 11470}. c Candidate gene encodes a 916 amino acid protein with a wheat tandom kinase (WTK) domain {11632}. Rmg1 was present |
RMG2
| Chromosome | 7A |
| i | CS (Thatcher 7A) {10461}. |
| Varieties (alt.) | Thatcher Rmg3 {10461}. |
RMG3
| Chromosome | 6B |
| i | CS (Thatcher 6B) {10461}. |
| Varieties (alt.) | Thatcher Rmg2 {10461}. |
RMG4
| Chromosome | 4A |
| Varieties | Norin 4 {10639}; Norin 26 {10639}; Norin 29 {10639}; P168 {10639}; Shin-chunaga {10639}; T. compactum No. 24 {10639}. Confers resistance to |
RMG5.
| Chromosome | 6D |
| Sources / synonyms | CS (Red Egyptian 6D) {10639}. |
| Varieties | Red Egyptian {10639}. Confers resistance to Digitaria isolate Dig41 at 26C {10639}. |
RMG6 . TraesCS1D02G029900 .
| Synonym | Rwt3 {11470, 11504} |
| Chromosome | 1DS |
| v1 | Chinese Spring {10948}; ShinChunaga {10948}, Transfed {11470}. |
| Varieties (alt.) | Chinese Spring Rmg9 {11504}, Norin 4 Rmg1 {10948, 11470}. |
| Marker associations | Xwmc432-1D – 9.6 cM – RMG6 – 6.6 cM – Xwmc222-1D {10948}; 11.60 – 11.80 Mb {11632}. |
| c | Candidate gene encodes an NRL with 1,069 amino acids (11632}. |
Rmg6 was present in 77% of surveyed genotypes 11470}.
Xwmc432-1D –
RMG9 – 5.0 cM –
RMG6 –
Xwmc222-1D {
11504}.
A second gene in chromosome 1D designated
Rwt4 {
0302} (
TraesCS1D02G058900 {
11632}) (was present in CS and Norin 4.
RMG7
| Chromosome | 2AL |
| Type varieties | T. dicoccum KU112 {11046}; KU120 {11046}; KU1222 {11046}. |
| Marker associations | Xcfd50-2A – 5.6 cM – Rmg7 – 15.1 cM – Xhbg327-2A {11083}. |
| c | The sequence of Rmg7 was identical to Pm4a {11735}. Rmg7 has the same specificity as Rmg8 {11735}. Rmg7 and Rmg8 recognise the same Avr-Rmg8 effector |
RMG8
| Chromosome | 2BL |
| Chromosome bin | 2BL6-0.89-1.00. |
| Varieties | S615 {11083}. |
| Marker associations | Xwmc317-2B – 12.1 cM – Rmg8 – 22.4 cM – Xbarc159-2B {11083}. |
| c | The nucleotide sequence of Rmg8 was identical to Pm4f {11735}. Rmg8 has the same specificity as Rmg7 {11735}. According to {11083} markers linked to RMG8 |
Among
PM4 alleles
Pm4a, Pm4b and Pm4d conferred resistance to both MoT and
Bgt ;
Pm5f conferred resistance to MoT but not
Bgt , and
Pm4f was ineffective against both pathogens {
11735}.
RmgGR119 confers resistance to the wheat form of the pathogen and its response is enhanced in combination with
Rmg8 {
11263}.
Near-isogenic lines with the T2A-2NS translocation from
Ae. ventricosa displayed reduced levels of spike blast, but there was little effect on seedling leaf blast response {
11265}:
RMG9
| Note | [ Rwt6 {11504}. |
| Chromosome | 1D |
v2 Chinese Spring
Rmg6 {
11504}.
RMG10
| Chromosome | 2DS |
| Varieties | Line 6051 (amphiploid Langdon / KU-2097) Permanent genbank accession number needed {11736}. |
| dv | Ae. taushii KU-2097 {11736}. |
| Marker associations | Xbarc-2D – 7.8 cM – Ms-4 – 7.8 cM – RMG10 – 8.3 cM – MS12 – 4.7 cM – Xwmc503-2D {11736}. |
RMG11
| Chromosome | 7AS |
| Type varieties | T. dicoccum St19, KU-114 {11755}. ma IMT5 – 1.0 cM – RMG11 – IMT6/IMT7 – 1.1 cM – Xgwm635 -7A{11755}. The Rmg11_ resistance remained effective |
Temporary desigations
| Varieties | GR119 Rmg8 {11652}. |
| Chromosome | 7BL |
| Type varieties | T. dicoccoides KU109 {10949}. |
| Marker associations | Xhbg338-7B – 10.5 cM – Rmg7 {10949}. |
RmgTd(t) was detected with a white culture of an
Avena pathogen isolate backcrossed to a wheat isolate. A virulence to
RmgTd(t) was completely associated with white color of the pathgen isolate {
10949}. The white color appeared as a mutant variant during backcrossing.
The wheat blast pathogen became established on wheat cultivar Anahuac (
rmg1 rmg6 ) in Brazil in the mid-1980s. It was initially avirulent on cultivars such as IAC-5 with
Rmg6 but later acquired virulence allowing it to attack most wheat genotypes {
11470}.
3.14. Reaction to Mayetiola destructor (Say) ( Phytophaga destructor ) (Say)⌂ Home
Insect pest: Hessian fly.
H1
| i | Dawson/3[*] Poso, 6179 {1087}. |
| Varieties (alt.) | Big Club 43 H2 {1441}; Dawson H2 {166}, {1087}; Poso 42 H2 {1441}. |
H2
| i | Dawson/3[*] Poso, 6232 {1087}. |
| Varieties (alt.) | Big Club 43 H1 {1441}; Dawson H1 {166}, {1087}; Poso 42 H1 {1441}. |
H3
| Note | Recessive. 5A {1105}, {425}. Based on the location of H9 on chromosome 1AS, H3 may also be located on chromosome |
| Chromosome | 1AS |
| i | Carol = Newton-207[*] 5/Larned {1107}. |
| Varieties | Ace {426}; Arthur {426}; Becker {749}; Cardinal {750}; Dual {1273}; Frankenmuth {341}; Georgia 1123 {426}; GR855 {751}; |
| Varieties (alt.) | Clara Fay H6 {375}. |
| Marker associations | Cosegregation of H3 and a RAPD {296}. |
Allan et al. {
019} considered that
H3 and
H4 might be allelic. Also suggested by Shands and Cartwright {
1317}. Linkage of 10.5 +/- 2% involving
H3 and
Pm3a in PI 468960 was attributed to a chromosome 1A/5A translocation {
1437}.
Recessive. 1AS {
11634}.
H4 confered resistance to race A, but not to race B.
H5
| Note | Temperature sensitive {1413}. |
| Chromosome | 1AS |
| Varieties | Abe {162}; Arthur 71 {162}; Beau {875}; Downy {1223}; Magnum {10252}; Oasis {1109}; Ribeiro {1317}; Sullivan {1110}. |
| Type varieties | Giorgio 331-4 {1090}; PI 94567-6 {1317}; PI 94571-14 {1317}. |
| Marker associations | Cosegregation of H5 and two RAPDs {296}. |
H6
| Note | Based on the location of H9 on chromosome 1AS, H6 may also be located on chromosome |
| Chromosome | 1AS |
| Chromosome | 5A |
| i | Erin = Newton-207[*] 7/Arthur 71 {1107}; Flynn = Newton-207[*] 7/Knox 62 {1107}. |
| Varieties | Adder {1319}; Benhur {426}; Caldwell {1421}; Compton {1318}; CI 12855 {19}; Excel {752}; Fillmore {1106}; Knox 62 {426}; |
| Varieties (alt.) | Clara Fay H3 {375}. |
| Type varieties | Purdue 4835 A4-6 {1105}. |
| tv2 | PI 94587 H11 H16 {19}. |
| Marker associations | Cosegregation with three RAPDs {296}. |
H7 and H8
| Note | Duplicate factors. H7 is located in chromosome |
| Chromosome | 5D |
| Varieties | Adena {748}; Seneca {425,26}. |
H9
| Chromosome | 1AS |
| Chromosome | 5A |
| i | Iris = Newton-207[*] 7/Ella {1107}. |
| Varieties | Ella {875}; Line 822-34 {162}. |
| Varieties (alt.) | Elva CI 17714 H10 {162}; Line 812-24 H10 {1421}; Line 817-2 H10 {1421}; Stella H10 {875}. |
| Marker associations | Cosegregation with two RAPDs {296}; STS-Pm – 1.7 cM – SOP005 909 – 0.6 cM – Xksu11/Xcnl76/Xgdm3 – 0.5 cM – Xgwm176/Xpsp2999/Xcfa2153-1A – 0.5 cM |
H10
| Note | May be identical to H9 {10252}. |
| Chromosome | 1AS |
| Chromosome | 5A |
| i | Joy = Newton207[*] 3/IN76529A5-3-3 {1107}. |
| Varieties | IN76529 {875}. |
| Varieties (alt.) | Elva CI 17714 H9 {162}; Line 817-2 H9 {162}; Stella H9 {875}. |
| Marker associations | Cosegregation with one RAPD and close linkage to another RAPD {296}; Xcfa2153-1A – 0.5 cM – H10 – 1.3 cM – Xbarc263-1A {10252}; Xrapd9-2-1000/Xpsp29991A/Xgps7072-1A – |
H11
| Chromosome | 1A |
| Chromosome | 1AS |
| i | Karen = Newton-207[*] 4/IN916-1-3-1-47-1 {1107}. |
| Varieties | Kay {875,375}; Line 916 {1422}; Line 920 {1422}; Line 941 {1422}. |
| tv2 | T. turgidum PI 94587 H6 H16 {1422}. |
| Marker associations | Close linkage with two RAPDs{296}; Xcfa2153-1A – 0.3 cM – H11 1.7 cM – Xbarc3631A {10252}. |
H12
| Chromosome | 5A |
| i | Lola = Newton-207[*] 4/Luso {1107}. |
| Varieties | Luso {1092}. |
| Marker associations | Cosegregation with one RAPD and close linkage of H12 to another RAPD {296}. |
H13
| Chromosome | 6DS |
| Chromosome | 6DL |
| i | Molly = Newton-207[*] 7/3/KU221-19/Eagle/ KS806 {1107}. |
| Varieties | AGS 2010 {11008}; AGS 2026 PI 658065 {11008}; KS81H1640HF {441}; Oglethrope PI 657986 {11008}; PI 562619 {10388}; SW34=Langdon/ Ae. tauschii RL |
| dv | Ae. tauschii KU 2076 {525}. |
| Marker associations | Cosegregation with a RAPD{296}; Xgdm36-6D – 2.7 cM – H13/Xcfd132-6D – 1.1 cM – Xcfd213-6D {10251}; Xcfd132-6D – 3.7 cM – H13 {10388}. |
H14
| Chromosome | 5A |
| Type varieties | IN 81601A2-3-3 {875}. |
| tv2 | ELS 6404-160 H15 {875}. |
| Marker associations | Cosegregation with a RAPD {296}. |
H15
Based on the location of
H9 on chromosome 1AS,
H15 may also be located on chromosome 1AS {
10231}.
H16
| Chromosome | 5A |
| Chromosome | 1AS |
| Chromosome bin | 1AS-3-0.86-1.00. |
| Varieties | P921682 {11058}. |
| Type varieties | IN 80164H5-2-9 {1106}; N80164 {1097}. |
| tv2 | PI 94587 H6 H11 {1106}. |
| Marker associations | Cosegregation of H16 and a RAPD{296}; Xpsp2999-1A – 3.7 cM – H16 – 5.5 cM – Xbarc263/Xwem6B-1A {11058}. |
H17
| Chromosome | 5A |
| Chromosome | 1AS |
| Chromosome bin | 1AS-3-0.86-1.00. |
| Varieties | P921680 {11058}. |
| Type varieties | PI 428435 {1090}. |
| Marker associations | Cosegregation of H17 and a RAPD {296}; Xpsp2999-1A – 6.27 cM – H17 – 5.1 cM – Xbard263/Xwem6B-1A {11058}. |
H18
H19
| Type varieties | PI 422297 {1089}; This germplasm possesses a second gene which is allelic or closely linked with H16 {1089}; IN84702 {1097}. |
| tv2 | PI422297 H29 {1097}. |
H20
| Chromosome | 2B |
| Type varieties | Jori {25}. |
| Note | 2B {383} = |
| Chromosome | 2BS |
H22
| Chromosome | 1D |
| Chromosome | 1DS |
| Varieties | KS86WGRC1 {1199}; KS85WGRC01= Ae. tauschii TA1644/Newton//Wichita {1199}; PI 572542 {10388}. |
| Marker associations | Xgdm33-1D – 1.0 cM – H22 – 0.3 cM – Xhor2KV-1D – 0.5 cM – Xgpw7082-1D {10381}. |
H23
| Chromosome | 6DS |
| Chromosome | 6DL |
| Chromosome | 6D |
| Varieties | KS89WGRC03 = TA1642 / 2*Wichita {10251,442}; PI 535766 {10388}. |
| al | Ae. tauschii TA1642 {10251}. |
| Marker associations | H23 – 6.9 cM – XksuH46D {861}; Maps to same region as H13 {10262}. |
H24
| Chromosome | 6DL |
| Chromosome | 3D |
| Varieties | KS89WGRC6 {442}; PI 535769 {10388}. |
| Marker associations | H24 – 5.9 cM – Xbcd451-6D/Xcdo482-6D {861}. |
H25
| Note | 6B{384} = T |
| Chromosome | 6BS |
H26
| Chromosome | 4D |
| Chromosome | 3DL |
| Chromosome bin | 3DL3-0.81-1.00. |
| Varieties | KS92WGRC26 {217}; SW8 = Langdon/ Ae. tauschii CIae 25 {10388}. |
| dv | Ae. tauschii TA2473 {217}. |
| Marker associations | Xcfd211-3D – 7.5 cM – H26 – 2.9 cM – Xwgc7330-3D – 4.0 cM – Xgwm3-3D {10388}. Xrwgs-3D – 3.2 cM – H26/Xrwgs11-3D – 1.0 |
H26 is very close to
H32 {
10846}.
H27
| Chromosome | 4M |
| su | H-93-33 {235}. |
| al | Ae. ventricosa No. 10 {235}; Ae. ventricosa No. 11 {235}. |
H28
| Note | 5[A] {171}. |
| Type varieties | PI 59190 {171}. |
H29
| Synonym | H27 {171} |
| Chromosome | 5A |
| Type varieties | PI422297 H19 {1097}. |
H30
| Note | Derived from Ae. triuncialis {0256}. |
| Varieties | TR-3531 {256}. |
| al | Ae. Triuncialis {256}. |
H31
| Chromosome | 5BS |
| Varieties | P961696{332}. |
| Type varieties | CI 3984{332}. |
| Marker associations | STS marker Xupw4148-5B – 3 cM – H31 {332}. |
| Chromosome | 3DL |
| Chromosome bin | 3DL3-0.81-1.00. |
| Varieties | Synthetic W7984 {10137}. |
| Marker associations | Xgwm3-3D – 1.7 cM – H32 – 1.7 cM – Xcfd-3D {10137}; Xrwgs10-3D – 0.5 cM – H32/Xrwgs11-3D – 0.5 cM – Xrwgs12-3D {10846}. KASP |
H33
| Chromosome | 3AS |
| Varieties | Line 97211 {10954}. |
| Type varieties | PI 134942 {10954}. |
| Marker associations | Xgwm218-3A – 10 & 7 cM – H33 – 28 & 25 cM – Xhbg-3A {10954}. |
H34
| Synonym | Qhf.hwwg-6B {11018} |
| Chromosome | 6BS |
| Varieties | Clark {11018}. |
| Marker associations | Flanked by Xsnp9216B and Xsnp2745-6B within a 4.5 cM region, R[2 ] = 0.38-0.42 {11018}. |
Halotype analysis was used to postulate
Ae. tauschii -derived genes
H13, H22, H23, H26 and
H32 in a set of synthetic wheat lines {
10983}.
H35 in chromosome arm 3BS and
H36 in chromosome arm 7AS were named for one major and one minor QTL in common wheat line SD06165 {
11512}.
Temporary designations:
| Chromosome | 1AS |
| Varieties | KS99WGRC42 {10262}. tv T. dicoccum PI 94641 {10262}. |
| Marker associations | Xcfa2153-1A – 1.4 cM – Hdic – 0.6 cM – Xgwm33-1A {10262}. |
| Synonym | Hf-NC09MDD14 {10844} |
| Chromosome | 6DS |
| Varieties | NC09MDD14 PI 656395 {10843}. |
| dv | Ae. tauschii TA2492 and/or TA2377 {10843}. |
| Marker associations | Xgdm36-6D – 1.5 cM – HNC09MDD14/Xcfd123-6D {10843}; HNC09MDD12 could be allelic to, but is different from, H13 {10843}. |
| Chromosome | 6AL |
| Chromosome bin | 6AL8-0.90-1.00 {11008}. |
| Varieties | 26R61 PI 612153 {11008}. |
| Marker associations | Mapped as a QTL (R[2] =0.63) flanked by Xgwm427-6A and wPt-731936 {11008}. |
| Chromosome | 6DS |
| Varieties | KS89WGRC04 = TA 1695 / 3*Wichita {10251}. |
| Marker associations | Allelic with H13 {10251}. |
A recombination value of 12.0% between leaf-rust reaction {possibly
Lr10 } and Hessian-fly reaction in Selection 5240 was reported {
018}.
| Chromosome | 1AS |
| Varieties | Clark H34 {11018}. |
| Marker associations | Closely linked to Xwgm33-1A {11018}; Located within a 6 cM region flanked by Xwgm33-1A and Xsnp5150-6B , R[2] =0.1 {11018}. |
| Chromosome | 6BS |
| Varieties | Chokwang {11635}. |
| Marker associations | Located to interval 6BS 6.029 – 10.779 Mb (CS RefSeq v2.0) {11635}. KASP markers developed {11635}. |
| Chromosome | 6BS |
| Varieties | Chokwang {11635}. |
| Marker associations | Located to interval 6BS 6.029 – 10.779 Mb (CS RefSeq v2.0) {11635}. KASP markers developed {11635}. |
| Note | Putatively derived from T. dicoccum {11510}. |
| Chromosome | 2AL |
| Marker associations | Linked with Ax94980581I {11510}. |
| Chromosome | 5BS |
| Type varieties | DWHF01 {11510}. Possible overlap with H31 {11510}. |
| Chromosome | 6BS |
| Type varieties | T. timopheevii subsp. ameniacum derivatives: DWHF02 {11510}; Chaoui {11510}; Icamoram7d {11510; Marouane {11510}; Nassira {11510}. |
| Marker associations | Linked with Ax95181449 {11510}. |
Duster (R) / Billings: DH population:
QHf.osu.1A.2 (Syn.
QHf.osu-1A[d] ), R[2] = 0.88, delimited to a 2.7 cM region flanked by
GBS07851 and
GBS10205 {
11324}. This was a distinct locus 11.2 cM proximal to
QHf.osu.1A .
Jagger (S) / 2174 9 (R): RIL population:
QHf.osu-1A (Syn.
Qhf.osu[74] (R[2] = 0.70) and
QHf.osu-2A (R[2] = 0.18) {
11325}. The QTL in chromosome 1A appeared to be co-linear with several previously named
H genes in tetraploid wheat; the gene in 2A was in repulsion with the 2N segment present in Jagger {
11325}.
Mayetiola-destructor susceptibility gene-1
| Note | [ Mds-1 ] {11327}. |
| Chromosome | 3AS |
| Varieties | No allelic variation demonstrated. |
| c | EST CD453475, GenBank JN162442; Mds-1A encodes a 151 amino-acid protein with 96% identity with HSP16.9 {11327}. Homoeologues are present in chromosomes 3B and 3D. Silencing |
RKN1
| Synonym | Rkn {632} |
| Chromosome | 6D |
| dv | Ae. tauschii G3489. |
| Varieties | Prosquare, a synthetic hexaploid of Produra/ Ae. tauschii G3489 {632}. |
RKN2
| Note | Derived from Ae. peregriina (variabilis) {1621}. |
| Synonym | Rkn-mn1 {1621} |
| Chromosome | 3B |
| Varieties | X8 = CS/ Ae. peregrina No. 1//Rescler/3/Lutin {1620}; X35 {1620, 1621}. |
| Marker associations | Co-segregation with RAPD OpY16 1065 and close linkage with several markers including Est-B5 {103}; converted to SCAR Y16 |
{
10486}; May be the same as
CreY (see reaction to
Heterodera avenae ) on chromosome 3S[V] from
Ae. variabilis translocated to 3BL {
10800}.
RKN3
| Note | Derived from Ae. ventricosa 2NS translocation into |
| Chromosome | 2AS |
| Varieties | VPM1, Lassik (PI 653535) {10801}. |
| Marker associations | Resistances to M. javanica and M. incognita mapped to the 2NS translocation in BC6F3 near isogenic lines of Anza (PI 638742), Yecora Rojo, and Express |
3.16. Reaction to Mycosphaerella graminicola (Fuckel) Schroeter, Zymoseptoria tritici⌂ Home
Disease: Septoria tritici blotch
STB1
| Synonym | Slb1 {1586} |
| Chromosome | 5BL |
| Chromosome bin | FL 5BL-11 - 5BL-14 {10123}; |
| Varieties | Bulgaria 88 {1586}; Oasis {1586}; P881072-75-1 {10123}; SO852 {10123}; Sullivan {1586}. |
| Marker associations | Close linkage with 2 RAPD markers at >0.68 and 1.4 cM in P881072-75-1 {10123}; Cent..... Xbarc74-5B – 2.8 cM – Stb1 {10123}. |
STB2
| Synonym | Slb2 {1586} |
| Chromosome | 1BS |
| Chromosome | 3BS |
| Varieties | Nova Prata {1586}; Veranopolis {1586}. |
| Marker associations | Xgwm389-3B/Xgwm533-3B – 1.0 cM – Stb2 – 3.7 cM – Xgwm493-3B {10105}; Stb2 is neither on 3BS nor linked with Xgwm389-3B {10976}; Xwmc406-1B – |
STB3
| Synonym | Slb3 {1586} |
| Chromosome | 7AS |
6D, {
10105} (according to {
10556} this location is not correct.
STB4
| Chromosome | 7DS |
| Chromosome | 7D |
| Varieties | Cleo {1410}; Gene {10010}; Tadinia {10140,1410}; Tadorna {1410}. |
| Marker associations | XAGG/CAT10 – 4.0 cM – Stb4 – 0.7 cM – Xgwm111-7D – 1.4 cM – XATCG/CAAA5 .......Cent {10140}; Stb4 – 0.7 cM – Xgwm111-7D {10140}. |
STB5
| Note | Identified using M. graminicola IPO94269 {0186}. Derived from Ae. tauschii accession 37-1 {0186}. |
| Chromosome | 7DS |
| Varieties | Baldus {11446}; Bezostaya {0187}; Chaucer {11446}; Hereward |
STB6
| Note | Confers resistance to M. graminicola isolate IPO323 but not to isolate IPO94269 {0187}. |
| Synonym | TaWAKL 4 {11434} |
| Chromosome | 3AS |
| Varieties | Amigo {10448}; Arina {10448}; Amada {10448}; Atlas 66 {10448}; Ble Seigle {10448}; Bon Fermier {10448}; Cadenza {11434}; Chinese Spring {10448}; Bezostaya 1 {10495}; Flame {187, |
| Varieties (alt.) | Bulgaria 88 Stb1 {10448}; Israel 493 Stb3 {10448}; Kavkaz-K4500 Stb7 Stb10 Stb12 {10011}; TE9111 Stb7 Stb11 {10012}; Veranopolis Stb2 {10448}. tv Stb6 is common in |
| Marker associations | A resistance gene from Senat located at or near the Stb6 locus was mapped 5 cM from microsatellite Xgwm369-3A on chromosome arm 3AS {10067}; Xgwm369-3A |
| c | Encodes a wall-associated receptor kinase (WAK)-like protein {11434}. |
STB7
| Chromosome | 4AL |
| Varieties | ST6 = Estanzuela Federal. |
| Varieties (alt.) | Kavkaz-K4500 Stb6 Stb10 Stb12 {10011}; TE9111 Stb6 Stb11 {10012}. |
| Marker associations | Xwmc219-4A – 0.8 cM – Xwmc-4A – 0.3 cM – Stb7 {0311}; Stb7 was closer to Xwmc313-4A than to Xwmc219-4A {10011}. |
STB8
| Chromosome | 7BL |
| Varieties | Synthetic hexaploid W7984 (parent of ITMI population) {0326}. |
| Marker associations | Xgwm146-7B – 3.5 cM – Stb8 – 5.3 cM – Xgwm577-7B {0326}. |
STB9
| Note | Culture IPO89011 |
| Chromosome | 2BL |
| Varieties | Courtot {10027}; Tonic {10027}. |
| Marker associations | Xfbb2262B – 3 cM – Stb9 – 9 cM – XksuF1b-2B {10027}. |
STB10
| Note | Confers resistance to cultures IPO94269 and ISR8036, but not to IPO87019 {10011}. |
| Chromosome | 1D |
| Varieties (alt.) | Gene Stb5 {11446}; Frontana Stb5 {11446}; Kavkaz-K4500 L.6.A.4 Stb6 Stb7 Stb12 = JIC.W9995 {10011}; Mentana Stb5 {11446}. |
| Marker associations | Associated with Xgwm848-1D {10011}. |
STB11
| Note | Confers resistance to isolate IPO90012 {10012}. |
| Chromosome | 1BS |
| Varieties | JIC W 9996; TE9111. |
| Varieties (alt.) | TE9111 Stb6 Stb7 {10012}. |
| Marker associations | Distal to Xbarc008-1B {10012}. |
STB12
| Note | Confers resistance to cultures ISR398, ISR8036 and IPO87019 {10011}. |
| Chromosome | 4AL |
| Varieties (alt.) | Kavkaz-K4500 Stb6 Stb7 Stb10 {10011}. |
| Marker associations | Stb12 was closer to Xwmc219-4A than to Xwmc3134A {10011}. |
STB13
| Note | Confers resistance to Canadian cultures MG96-13 and MG2 {10347} |
| Chromosome | 7BL |
| Varieties | DH line 90S05B*01 {10347}; DH line 98S08C*03 {10347}. |
| Varieties (alt.) | Salamouni Stb14 {10347}. |
| Marker associations | Xwmc396-7B – 9 cM – Stb13 {10347}; Xwmc396-7B – 7 cM – Stb13 {10347}. |
STB14
| Note | Confers resistance to Canadian isolate MG2 but not to MG96-13 {10347} |
| Chromosome | 3BS |
| Varieties | DH line 98S08A*09 {10348}. |
| Varieties (alt.) | Salamouni Stb13 {10347}. |
| Marker associations | Xwmc500-3B – 2 cM – Stb14 – 5 cM – Xwmc623-3B {10348}. |
STB15
| Note | Confers resistance to Ethiopian culture IPO88004 {10341} |
| Chromosome | 6AS |
| Varieties | Riband {10341}. |
| Varieties (alt.) | Arina Stb6 {10341}. |
| Marker associations | Stb15 – 14 cM – Xpsr904-6A {10341}. |
STB16
| Note | Seedling and adult plant resistance |
| Synonym | Stb16q {10879} |
| Chromosome | 3DL |
| Varieties (alt.) | Synthetic W- 7976 Stb17 {10879}. |
| Marker associations | Associated with Xgwm494-3D and mapped as a QTL, R[2] =0.4-0.7 in seedling tests and 0.28-0.31 in mature plants {10879}. |
STB17
| Note | Adult plant resistance |
| Chromosome | 5AL |
| Varieties (alt.) | Synthetic W-7976 Stb16 {10879}. |
| Marker associations | Associated with Xhbg247-5A and mapped as a QTL, R[2] =0.12-0.32 {10879}. |
STB18
| Note | Confers resistance to IPO0323, IPO98022, IPO98046 {10827} |
| Chromosome | 6DS |
| Varieties (alt.) | Balance Stb6 Stb11 {10827}. |
| Marker associations | Mapped as a QTL located in a 8.8 cM region spanned by Xgpw30876D and Xgpw5176-6D {10827}. |
STB19
| Note | Derived from synthetic wheat. |
| Chromosome | 1DS |
| Varieties | Lorikeet {11360}. |
| Marker associations | KASP markers snp4909967 and snp1218021 {11360}. |
See {11332, 11361} for reviews.
Temporary designation
| Note | Resistance to IPO323. |
| dv | T. monococcum MDR043 {11446}. |
QTL
Four QTLs for resistance to
Mycosphaerella graminicola were identified in replicated field experiments in a double haploid population from
Savannah (susceptible)/Senat (resistant) . Senat contributed all the alleles providing resistance {
10067}.
QStb.riso-2B was mapped on chromosome arm 2BL linked to SSR marker
Xwmc175-2B (LOD>5, R[2] >17%) {
10067}.
QStb.riso-3A.2 was mapped on chromosome arm 3AS linked to SSR markers
Xwmc489-3A, Xwmc3883A and
Xwmc505-3A (LOD >4, R[2 ] >18%). Also detected at the seedling stage {
10067}.
Xgwm369-3A is present on chromosome arm 3AS {
0187}. A resistance gene from Senat located at or near the
STB6 was mapped 5 cM from
Xgwm369-3A on chromosome arm 3AS {
10067}.
QStb.riso-6B was mapped on the centromeric region between SSR markers
Xwmc494-6B and
Xwmc3416B (LOD >16, R[2 ] >68%). Also detected at the seedling stage {
10067}.
QStb.riso-7B was mapped on chromosome 7B close to SSR marker
Xwmc517-7B (LOD>4, R[2 ] >11%) {
10067}.
ITMI Population: Three QTL,
QStb.ipk-1DS, QStb.ipk-2DS and
QStb.ipk-6DS conferred seedling-stage resistance to 2 isolates, whereas 2 QTL
QStb.ipk-3DL and
QStb.ipk-7BL conferred separate adult-stage resistances to each isolate {
10151}.
A weak QTL,
QStb.psr-7D.1 , giving partial resistance to Portuguese isolate IPO92006, was detected in the
Xcdo475b-7B - Xswm5-7B region in chromosome 7DS {
10341}.
Apache / Balance: Analyses with a panel of
M. graminicola cultures identified QTLs on chromosomes 1BS (Apache, considered to be
Stb11 ), 3AS (Balance, considered to be
Stb6 ), 6DS (Balance, named as
Stb18 ), 7DS (Apache, considered to be
Stb4 ) and 7DL (Apache) {
10827}.
Florett / Biscay (S): RIL population: two QTLs for APR were located on chromosomes 3B and 6D {
10901}.
Solitar (R) / Mazurka (S): DH population: Resistance under field conditions was associated with QTL on chromosomes 5A, 6D and 7D which accounted for 20% of the genotypic variation; all three were derived from Solitar, but there was no evidence that
Stb6 and
Stb11 , also present in Solitar, were involved {
10984}.
Spelt HRTI1410 (R) / three wheat parents: 135 DH lines: mapped using SNP polymorphisms common to all three S parents: four QTL identified on chromosome 5AL (74.2 – 82.4 cM; r[2] = 0.18); 4B (52.9 –
56.9 cm, r[2] = 0.09) contributed by the susceptible parents; and 7B.1 (41.2 – 57.0 cM, r[2] = 0.09), and 7B.2 (58.2 – 67.4 cM, r[2] = 0.15) contributed by the susceptible parents {
11430}.
Steele-ND (R) / ND735 (S): RIL population: A consistent QTL (R[2] =0.1) for seedling resistance flanked by DArT markers
XwPt-7101 and
X377410 was mapped to chromosome 5BL in the region of
Stb1 {
10992}. Two other QTLs on chromosomes 1D and 7A were detected in single experiments {
10992}.
Tuareg / Biscay (S): RIL population: two QTLs for APR were located on chromosomes 4B and 6B {
10901}.
For a review of qualitative and quantitative resistance {
11439}.
3.17. Reaction to Phaeosphaeria nodorum (E. Muller) Hedjaroude (anamorph: Stagonospora nodorum (Berk.) Castellani & E.G. Germano); Parastagonospora nodorum⌂ Home
Disease: Septoria nodorum blotch, Stagonospora nodorum blotch.
SNB1
| Chromosome | 3AL |
| Varieties | Red Chief {856}. |
| Varieties (alt.) | EE8 Snb2 {856}. |
SNB2
| Chromosome | 2AL |
| Varieties (alt.) | EE8 Snb1 {856}. |
SNB3
| Chromosome | 5DL |
| Sources / synonyms | CS[*] /Synthetic 5D {1594}. |
| Varieties | Synthetic {1594}. |
| dv | Ae. Tauschii {1594}. |
QTL
A QTL analysis of SNB response in the
ITMI population found significant effects associated with chromosome 1B (probably
Snn1 ) and 4BL, with an interactive effect involving the 1BS region and a
marker on chromosome 2B {
10009}. An additional QTL on 7BL was effective at a later stage of disease development {
10009}.
Arina / Forno: RIL population {
10065}. Two QTLs for glume blotch resistance under natural infection were identified on chromosomes 3BS and 4BL in.
QSng.sfr-3BL was associated with marker
Xgwm3893B and explained 31.2% of the variation with resistance contributed by Arina {
10065}. The 4BL QTL,
QSng.sfr-4BL , was associated with
Xgwm251-4B and explained 19.1% of the variation. Resistance was contributed by Forno {
10065}. A QTL on 5BL,
QSng.sfr-5BL , overlapped with QTLs for plant height and heading time {
10065}.
QSng.sfr-3BS peaked 0.6 cm proximal to
Xsun2-3B {
10465}. Association mapping involving 44 modern European cultivars indicated that the association was retained in a significant proportion of genotypes {
10465}.
Br34 / Grandin: Three QTLs with resistance effects from BR34;
Qsnb.fcu-5BL.1 (
Tsn1 ), R[2] = 0.63,
Qsnb.fcu5BL.2, R[2] = 0.06, and
Qsnb.fcu-1BS (vicinity of
Snn1 ), R[2] = 0.10 {
10458}. QTL analysis of the RIL population with Culture Sn6 revealed four QTLs,
Qsnb.fcu-2DS (R[2] = 0.3 - 0.49) associated with
Snn2 ,
Qsnb.fcu-5BL (R[2] = 0.14 - 0.2) associated with
Tsn1, Qsnb.fcu-5AL (R[2] = 0 - 0.13) associated with
Xfcp13-5A , and
Qsnb.fcu-1BS (R[2] = 0 - 0.11) associated with
Xgdm125-1BS {
10507}.
Forno (S) / Oberkulmer spelt (R): Among 204 RILs leaf and glume response were genetically different but correlated (R[2] =0.52). Ten QTLs for glume blotch (SNG) resistance were detected, 6 from Forno. A major QTL (R[2] =35.8%) was associated with q. Eleven QTLs (4 from Forno) affected leaf blotch; 3 of these (chromosome 3D, 4B and 7B) with R[2] >13% were considered potential candidates for MAS {
10250}.
HRWSN125 (R) / WAWHT2074 (S): Constant detection of
QSnl.daw-2DL for flag leaf resistance, and
QSng.daw-4BL for glume resistance over two years {
10584}.
ITMI population: A major QTL, coinciding with
Snn1 , was located in chromosome 1BS (R[2] = 0.58, 5 days after inoculation), minor QTL were found in 3AS, 3DL, 4AL, 4BL, 5DL, 6AL and 7BL {
10009}. P91193D1 (partially resistant) / P92201D5 (partially resistant) RIL populations were tested in Indiana and Western Australia for glume resistance. Two QTL were identified:
Qng.pur-2DL.1 from P91193D1 (R[2] = 12.3 in Indiana and 38.1% in WA, respectively;
Xgwm526.1-2D - Xcfd50.2-2D ) and
QSng.pur2DL.2 from P99201D5 (R[2] = 6.9% and 11.2%, respectively;
Xcfd50.3-2D - wPT9848 ) {
10471}.
Liwilla / Begra: DH population: Four QTLs, on chromosomes 2B (proximal part of long arm), 3B (distal part of short arm), 5B and 5D. A longer incubation period and lower disease intensity were contributed by Liwilla {
10045}. A QTL,
QSnl.ihar-6AL , identified in DH lines of Alba (R) / Begra (S) accounted for 36% of the phenotypic variance in disease severity and 14% of the variance in incubation period {
10143}.
Salamouni/Katepwa: RIL population: Two QTLs.
QSnb.fcu-1A (
Snn4 ) (R[2] =0.24) and
QSnb.fcu-7A (R[2] =0.16) were associated with SNB response to isolate Sn99CH 1A7a {
10867}.
## Tetraploid wheat
Langdon / Langdon ( T. turgidum ssp. dicoccoides Israel-A 5B): QSnb.ndsu-5B located 8.3 cM proximal to
tsn1 for tan spot resistance; R[2] = 0.38 {
10597}.
A summary of QTL analyses is provided in {
10726}.
TSN1
| Note | Sensitive to SnToxA, which is functionally identical to Ptr ToxA {10459}. |
| Varieties | Cheyenne {7}; Forno {10725}; Hope {7}; Jagger {7}; Kulm {10458, 10030, 346}; ND495 {7}; Timstein {7}; Trenton {315}. |
| dv | Two Ae. speltoides accessions {10756}. |
| Type varieties | Langdon {10458}; Some T. dicoccoides accessions {10756}. |
| c | Tsn1 has 8 exons and a S/TPK-NBS-LRR structure; all three domains are required for function and TSN1 protein does not interact directly with ToxA {10756}. |
tsn1 {
10207}, {
346}. Insensitivity (disease resistance) is recessive {
346}. 5BL {
346}.
SNN1
| Note | TaWAK {11341}. Sensitivity to SnTox1 is dominant {10008} |
| Chromosome | 1BS |
| Chromosome bin | 1BS.sat.18. |
| Sources / synonyms | CS-DIC 1B {10008}. |
| Varieties | CS {10008}; Grandin {10008}; Kulm {10008}; M-6 {10960}; ND495 {10008}. |
| Marker associations | Snn1 – 4.7 cM – XksuD14-1B {10008}; XksuD14.2-1BS – 0.4 cM – Snn1/XBE498831/XBF474204 – 0.4 cM Xpsp3000-1BS/XBE422980/XBE637568/ZBE605202 {10727}; |
XksuD14.2 **–
SNN2
| Note | Sensitivity to SnTox2 is dominant {10507}. |
| Chromosome | 2DS |
| Varieties | BG223 {10507}. |
| Varieties (alt.) | Grandin Tsn1 Snn3 {10507}. |
| Marker associations | Xgwm614-2D **– |
SNN3
SNN4
| Note | Sensitivity to SnTox4 is dominant {10725} |
| Chromosome | 1AS |
| Chromosome bin | 1AS3-0.86-1.00 {10725}. |
| Varieties | Arina {10725}; Katepwa {10867}; Salamouni {10867}. |
| Marker associations | XBG262267/ **– |
SNN5
| Chromosome | 4BL |
| Chromosome bin | 4BL5-0.85-1.00. |
| Type varieties | T. carthlicum PI 94749 {10925}. |
| tv2 | Lebsock Tsn1 Snn3-B1 {11203}. |
| Marker associations | Xbarc163/Xcfd-4B **– |
SNN6
| Chromosome | 6AL |
| Varieties | Opata 85 {11206}; RIL ITMI137 {11206}. |
| Marker associations | Flanked by XBE424987 and XBE403326 {11206}. |
snn6 . v: Synthetic W-7984 {
11206}.
SNN7
| Note | Sensitive to SnTox7. |
| Chromosome | 2DL |
| Chromosome bin | 2DL-9-0.75-1.00. |
| Varieties | Timstein {11292}. |
| Marker associations | Xcdf267-2D – 2.3 cM – Xgdm6-2D – 0.9 cM – Snn7/Xcfd44-2D – 1.8 cM – Xgwm349-2D – 11.3 cM – Xgwm311-2D {11292}. |
| Varieties | Identified in the UK MAGIC population {11133}. |
ITMI population: A major QTL, coinciding with
Snn1 , was located in chromosome 1BS (R[2 ] = 0.58, 5 days after inoculation), minor QTLs were found in 3AS, 3DL, 4AL, 4BL, 5DL, 6AL and 7BL {
10009}.
P91193D1 / P92201D5: RIL population: tested in USA and Australia:
QSng.pur-2DL.1 from P91103D1, R[2] =0.123 (Indiana) and 0.381 (South Perth); and
QSng.pur-2DL.2 from P92201D5, R[2] =0.069 (Indiana) and 0.112 (South Perth) {
10776}.
Host sensitivity genes in US southern winter wheats are listed in {
1241}.
3.18. Reaction to Pratylenchus spp.⌂ Home
Root lesion nematode; prats
RLNN1
| Chromosome | 7AL |
| Varieties | Excalibur {0121}; Krickauff {0121}. |
| Marker associations | Mapped between markers Xpsr121-7A and Xgwm344-7A and 9 cM proximal to Lr20 {0374}. |
3.19. Reaction to Puccinia coronata var. hordei .⌂ Home
CR1
| Chromosome | 5DL |
| Varieties | Chris CItr 14108 {10956}. |
| Marker associations | Xwmc41.2-5D **– |
3.20. Reaction to Puccinia graminis Pers.⌂ Home
Disease: Black rust; black stem rust; stem rust.
Note: Some near-isogenic lines are based on Marquis. The genes present in the Marquis background are not listed for those NILs.
SR2
| Note | Recessive allele. Adult plant response. |
| Chromosome | 3BS |
| Sources / synonyms | CS[*] 6/Hope 3B {499}. |
| Varieties (alt.) | HD2009 Sr30 {10632}; Warigo Sr7b Sr17 {499}; Suneca Sr8a Sr17 {485}; Hopps Sr9d {499}; Lancer Sr9d Sr17 {679}; Scout _Sr9d |
| Marker associations | Xgwm389-3B **– |
SR3 & SR4
| Varieties | Marquillo - based on early data. No stocks for the individual genes available. |
SR5
| Note | 6D {1308}, {939}, {1626}. |
| Chromosome | 6DS |
| i | I Sr5 -Ra {828}; I Sr5 -Rb {828}; Sr5/7[*] LMPG {685}; Thatcher/10[*] Marquis {686}. |
| Sources / synonyms | CS[*] 6/Thatcher 6D {1308}. |
| Varieties | Admonter Fruh {72}; Dacia |
{
979}; Dong-Fang-Hong 2 {
564}; Dong-Fang-Hong 6 {
564}; Feng-Kong {
563}; Hochzucht {
46}; Hybrid 80-3 {
72}; Jubilejna {
68}; Juna {
76}; Kanred {
1308}; Ke-Fang 1 {
564}; Stabil {
72}; Viginta {
71}; Vrakunski {
72}.
SR6
| Synonym | SrKa1 {1167} |
| Chromosome | 2D |
| Chromosome | 2DS |
| Chromosome bin | 2DS5 - 0.47 - 1.00 {10714}. |
| i | I Sr6 -Ra {828}; Kenya 58/10[*] Marquis {675, 468}; Sr6/9[*] LMPG {685}. |
| Sources / synonyms | CS[*] 5/Red Egyptian 2D {1308}. |
| Varieties | Africa 43 {669}; Eureka {468, 844}; Kenya stocks {1167, 669, 1557, 687, 673, 670, 689}; McMurachy {679}; Shield {198}. |
| Varieties (alt.) | Bowie Sr8a {1553}; Eurga Sr11 {1553}; Fortuna Sr7a {679}; Gamut Sr9b Sr11 {1555}; Glenlea (heterogeneous) Sr5 Sr9b {327}; Kentana 52 Sr7a |
| Marker associations | Sr6 **– |
| Synonym | Sr7 {687} |
| i | Egypt Na101/6[*] Marquis {468}; Kenya 117A/6[*] Marquis {468}; Sr7a/9[*] LMPG {685}. |
| Sources / synonyms | CS[*] 7/Kenya Farmer 4B {830}; CS[*] 8/Sapporo 4B {830}. |
| Varieties | Egypt Na101 {669}; Jagger Sr38 {11420}; Kenya stocks{669}, {687}, {673}, {670}, {689}; Sapporo Haru Komugi Ichigo {689}. |
| Varieties (alt.) | Egypt Na95 Sr9b Sr10 {687}; Fortuna Sr6 {679}; French Peace Sr9a Sr13 {680}; Kentana 52 Sr6 {689}; Khapstein Sr13 Sr14 {674}; |
| Marker associations | Xwmc313-4A – SNP1067 – 0.8 cM – Sr7a – 2.7 cM – Xbarc78-4A – 2.7 cM – SNP7126 {11420}. |
| i | I Sr7b -Ra {828}. |
| Varieties (alt.) | Warigo Sr2 Sr17 {499}; Kiric 66 Sr6 {979}; Roussalka Sr8a {979}; Red Bobs Sr10 {308}; Nell Sr17 {1565}; PI 177906 |
SR8 6A {1293, 1308}. 6AS{
929}, {
1368}.
| Synonym | Sr8 {687} |
| i | I Sr8a-Ra {828}; Red Egyptian/10[*] Marquis {686}; Sr8a/9[*] LMPG {685}. |
| Sources / synonyms | CS[*] 5/Red Egyptian 6A {1308}. |
| Varieties | Harvest {11418}; Marimp 3 {979}; Mentana {844}; Strampelli {979}. |
| Varieties (alt.) | An-Hewi II Sr5 {564}; E-Gan-Zao Sr17 {564}; Erythrospermum 974 Sr5 {72}; Frontana b {689}; Golden Valley Sr17 {979}; Hartog _Sr2 |
| Marker associations | Terminally located; SNP markers within 2 cM {11416}. Sr8a – 2.2 cM – Xgwm459-6 A {11418}. |
| Synonym | SrBB |
| Varieties | Barleta Benvenuto {1368}; Klein Titan {1368}. |
| Varieties (alt.) | Bezostaya Sr5 {979}; Klein Cometa Sr30 {1368}. |
| Type varieties | According to Luig {841} one of the genes in Leeds is Sr8b . |
| tv2 | Arrivato Sr9e Sr13 {10607}. |
| Marker associations | Sr8b **– |
| Synonym | Sr9 {687} |
| i | I Sr9a -Ra {828}; Red Egyptian/10[*] Marquis {686}; Sr9a/9[*] LMPG {685}. |
| Sources / synonyms | CS[*] 4/Red Egyptian 2B {1308}. |
| Varieties (alt.) | Red Egyptian Sr6 Sr8a {687}; French Peace Sr7a Sr13 {680}; Excel Sr8a Sr17 {752}. |
| Marker associations | Xbarc101-2B/Xgwm12-2B **– |
| Synonym | SrKb1 {468}, Sr9 {687} |
| i | Kenya 117A/10[*] Marquis {686}; Sr9b /10[*] LMPG {685}. |
| Sources / synonyms | CS[*] 7/Kenya Farmer 2B {939}. |
| Varieties | Gamenya {844}; Kenya stocks {669}, {1557}, {687}, {673}, {67}, {689}. |
| Varieties (alt.) | Egypt Na95 Sr7a Sr10 {636}; Festival Sr15 {1553}; Frontana Sr8a {689}; Gamut Sr6 Sr11 {1555}; Glenlea Sr5 Sr6 heterogeneous {327}; |
| c | SR9B differs from SR9H and SR9G by different single amino acids {11747}. |
| Note | Originally reserved for Sr36 , but later deleted .
Sr9d {678}, {831}. |
| Synonym | Sr1 {676}, {47}, {677} |
| i | Hope/10[*] Marquis {677}; H-44/10[*] Marquis {677}; I Hope 2B-Ra {828}; Sr9d/8[*] LMPG {685}. |
| Varieties | Hopps Sr2 {1040}. |
| Varieties (alt.) | Lancer Sr2 Sr17 {679}; Scout Sr2 Sr17 {679}. |
| Type varieties | Arnautka {939}; Mindum {939}; Spelmar {939}. |
| Note | Srv {1391}, Srd1v {642}, SrKn {11590}. TRITD2Bv1G223210 . |
| Varieties | Line Td31-5R PI700734 {11514, 11590}; SST 16 {1324}; SST 33 {785}; SST 66 {785}; SST 3R {1324}; Vernstein {845}. |
| Varieties (alt.) | Combination III Sr36 {841}; Sunstar Sr8a Sr12 {939}. |
| Type varieties | ST464-A2 {10473}; Svevo {11590}; Vernal emmer {1391}; CI 7778 {845}; Sr9e occurs in many tetraploid wheats {1378, 939}. |
| tv2 | Arrivato Sr8b Sr13 {10607}; Kronos Sr13 {11590}; ST464 Sr13 {10473}. |
| Marker associations | Xgwm191-2B **– |
| Varieties | Chinese Spring {826}; Not present in the near-isogenic I Sr9a -Ra {826}. Deleted {11747}. The Sr9f homolog protein in CS is non-functional indicating that |
| Sources / synonyms | CS[*] 7/Marquis 2B Sr16 {965}; CS[*] 4/Thatcher 2B Sr16 {965}. |
| Varieties (alt.) | Celebration Sr12 Sr16 {965}; Eagle Sr26 {842}; Hochzucht Sr5 Sr12 {965}; Lee Sr11 Sr16 {965}. |
| Type varieties | Acme {965}; Iumillo {965}; Kubanka {965}. See also {504}. |
| c | SR9G differs from SR9H by a single amino acid {11747}. |
| Synonym | SrWeb {10858}, SrWLR {11485}. |
| Chromosome | 2BL |
| Varieties | Matlabas {10058, 11486}; RL6203 {11010}. |
| Varieties (alt.) | Gabo 56 CI 14035 Sr11 {11010}; Gabo CI 12795 Sr11 {11010}; Timstein CI 12347 Sr11 {11010}; Webster RL6201 Sr30 {10858}. |
| Marker associations | Xgwm47-2B **– |
SR10
| Note | 2B {686}, {939}. |
| i | Egypt Na95/4[*] Marquis {468}. |
| Varieties | Federation {939}; Geneva {1412}; Hazen {49}; Kenya stocks {669}, {687}, {673}, {670}. |
| Varieties (alt.) | Egypt Na95 Sr7a Sr9b {687}; No. 466 Sr6 Sr9b {689}; Red Bobs Sr7b {308}. |
SR11
| Synonym | Sr11 {687}, Sr12 {687} |
| Chromosome | 6BL |
| Chromosome | 6B |
| i | I Sr11 -Ra {828}; Lee/10[*] Marquis {686}. |
| Sources / synonyms | CS[*] 7/Kenya Farmer 6B {830}; CS[*] 9/Timstein 6B {1308}. |
| Varieties | Charter {844}; Flevina {72}; Gabo {687}; Kenya stocks {1557, 673, 670, 844}; Sonora 64 {33}; Sylvia {71}; Timstein {1308, 687}; |
| Varieties (alt.) | Charter Sr9h {11177}; Eurga Sr6 {1553}; Gamut Sr6 Sr9b {1555}; Lee Sr9g Sr16 {687}; N.P.790 Sr5 {1555}; Qing-Chung 5 Sr5 Sr6 |
| Marker associations | KASP6BLIWB46893 – 0.3 cM – Sr11/KASP6BLIWB10724 – 0.3 cM – KASP6BLIWB72471 {11177}. |
A resistance gene allelic with
Sr11 was found in Chinese Spring {
938}, but the
P. graminis culture for its detection was lost.
SR12
| Note | Recessive. 3BS or centromeric region {11103}, {682}, {968}, {1332}. |
| Chromosome | 3BL |
| Sources / synonyms | CS[*] 7/Marquis Selection 3B Sr16 {1332}; CS[*] 5/Thatcher 3B Sr16 {1332}. |
| Varieties | Marquillo {682}; Tincurrin {939}; Windebri {939}. |
| Varieties (alt.) | Condor Sr8a {11105}; Celebration Sr9gSr16 {939}; Condor Thatcher Sr5Sr9gSr16 {939}; RL6058 (a Thatcher derivative) {11104}; W3746 Sr7a {1371}. |
Postulated for several durums {
1378}.
SR13
| itv | 8155-B2 {11584}; 8155-C2 {11584}; Rusty-SR464-C1 {11584}; ST464-C1 {10473, 11584}. |
| Type varieties | Alkabo {11584}; Altar 84 {11584}; CItr 7771 {11584}; D101073 {11584}; Langdon {11217, 11584}; PI 352548 {11584}; ST464 Sr9e {10473, 11584}. |
| c | GenBank KY924305 (Resistance haplotype R3 {11217). |
| itv | CAT-A1 {11584}. |
| Type varieties | Camadi Abdu Tipo #103 {11584}. c : MW033594 (Resistance haplotype R4 {11584}. |
Alleles of many of the Sr13 genotypes listed under
SR14
| Chromosome | 1BL |
| i | Khapstein/10[*] Marquis {686}. |
| Varieties | Line A {933}. |
| Varieties (alt.) | Khapstein Sr7a Sr13 {674}. |
| tv2 | Khapli Sr13 {674}. |
SR15
| Chromosome | 7AL |
| Chromosome | 7A |
| Varieties | Present in stocks possessing Pm1 and Lr20 {931}, {1554}; See Reaction to Blumeria graminis and Reaction to P. triticina . |
| Marker associations | Associated with clustered markers {323}. |
SR16
SR17
| Note | Recessive. |
| Synonym | sr17 {964} |
| Chromosome | 7B |
SR18
| Synonym | SrMn1 {1263}, Srmq1 {99}, SrPs1 {1263}, SrG2 {844}, Srrl1 {1238} |
| Chromosome | 1D |
| i | I Hope 1D-Ra {828}; Sr18/8[*] LMPG {685}. |
| Sources / synonyms | CS[*] 6/Hope 1D {1308}. |
| Varieties | Present in the majority of wheat stocks{828}. |
Stocks
not possessing
Sr18 : Brevit {
54}; Chinese Spring {
828}; Eureka {
54}; Federation {
54}; Gular {
54}; Kenya C6042 {
54}; Koala {
54}; Little Club {
828}; Morocco {
54}; Norka {
54}; Prelude {
828}; Yalta {
54}.
SR19
| Synonym | Srmq2 {99} |
| Chromosome | 2B |
| Chromosome | 2BS |
| Varieties | Mq-B {29}. |
| Varieties (alt.) | Marquis Sr7b Sr18 Sr20 {29}. |
SR20
| Synonym | Srmq3 {1238}, Srrl3 {1238} |
| Chromosome | 2B |
| Varieties | Mq-C {29}; Rl-C {29}. |
| Varieties (alt.) | Reliance Sr5 Sr16 Sr18 {29}; Marquis Sr7b Sr18 Sr19 {29}. |
SR21
| Chromosome | 2AL |
| i | Sr21/8[*] LMPG {685}. |
| Varieties | CSSr21 {M10115}; Hexaploid derivatives of T. monococcum {939}. |
| Type varieties | Tetraploid derivatives of T. monococcum {939}. |
| dv | Einkorn CI2433 {1460, 11110}; Dv92 Sr35 {10876}; G2919 Sr35 {10876}; Various monococcum accessions. See also Sr45 which has similar specificity to Sr21 |
| Marker associations | FD52726 **– |
SR22
| Note | Sr22 {1460}. |
| Chromosome | 7A |
| Chromosome | 7AL |
| Chromosome bin | 7AL-0.74-0.86; 7AL-13 0.83-0.89 {10869}. |
| i | Marquis[*] 4//Stewart[*] 3/ T. monococcum {649, 1460}; Sr22/9[*] LMPG {685}; Others {1112}. |
| Varieties | CS/3/Steinwedel[*] 2//Spelmar/ T. boeoticum {1460}; Schomburgk {880}; Steinwedel[*] 2//Spelmar/ T. boeoticum {1460}; Others {1112}; Recombinant line reported in {10772, 10773}. |
| Type varieties | Spelmar/ T. boeoticum {1460}; Stewart[*] 6/ T. monococcum RL 5244 {649}. |
| dv | Various T. monococcum accessions {649, 1460}. |
| Marker associations | Hexaploid derivatives with Sr22a carried 'alien' segments of varying lengths; the shortest segment was distal to Xpsr129-7A {1112}; See also{158}; Xcfa2123-7A – 6 cM – |
| Note | SrTm5 {11208}. 7A[m] L {11208}. |
| dv | T. monococcum ssp. monococcum PI 277131-2 Sr21 Sr22b Sr60 {11208, 11385}; PI 306540 Sr21 Sr22b Sr60 SrTm4 {11208, 11385}. |
| i | PI 306540 (2x)/Kronos (4x)//Clear White (6x)///*3 Fielder {11514}; PI 700735 {11514}. |
| Marker associations | SrTm5/IWB25012/IWB44281/IWB405527/Sr22GMF/GMR – 0.8 cM – IWB6942 {11208}; pkw4995 (RefSeq v1.1 TraesCS7A02G499500 ) - 0.04 cM – SrTm5 – 0.04 cM- pkw4999 (RefSeq v1.1 TraesCS7A02G499900 ) |
| c | Sr22b has an insertion of a large (13.8-kb) retrotransposon in its second intron {11514}.The predicted Sr22b NLR protein is 95.7 to 96.7% identical to proteins |
from six
Sr22a resistant haplotypes {
11514}. Allelism of
Sr22a and
Sr22b was based on more than 2,200 gametes {
11514}.
SR23
| Note | The following chromosome locations are consistant with the finding that the first location was based on Rescue monosomics. Rescue differs from CS by a 2B-4B |
| Chromosome | 2BS |
| Chromosome | 4B |
| Varieties | Exchange {950}; Warden {950}; Sr23 is always associated with Lr16 {950}. |
| Varieties (alt.) | Etoile de Choisy Sr29 {950}. |
SR24
| Note | Derived from Thin. elongatum . 3DL = T |
| Chromosome | 3DS |
3DL-3Ae#1L {389, 956}.
SR25
| Note | Derived from Thin. elongatum . 7DL = T |
| Chromosome | 7DS |
7DL-7Ae#1L {388, 657, 291, 956}.
SR26
| Note | Derived from Thin. elongatum . 6AL {364} = T |
| Chromosome | 6AS |
SR27
| Note | Derived from S. cereale . 3A (T3A-3R) = T |
| Chromosome | 3AS |
SR28
| Chromosome | 2BL |
| i | Line AD {932}. |
| Varieties | SD 1691, CI 12499 {11148}. |
| Varieties (alt.) | Kota Sr7b Sr18 {932}; SD4297 Sr8a {11419}. |
| Marker associations | Xwmc332 – 1.4 cM – Sr28 – 6.0 cM – wPt-7007{11148}; Sr28 – 1.6 cM – wPt-7004 {11148}; Sr28 – 0.6 cM – |
Although {
11149} concluded that
Sr28 was present in VL404 and Janz it is more likely that the gene described is the linked gene
Sr9h .
The
Sr28 allele in SD4297 was originally reported as
Sr9h {
11418}.
SR29
| Synonym | SrEC {955} |
| Chromosome | 6DL |
| Chromosome | 6DS |
| i | Prelude/8[*] Marquis//Etoile de Choisy {313}. |
| Varieties | Hana {71}; Hela {76}; Mara {68}; Slavia {76}; Vala {76}. |
| Varieties (alt.) | Etoile de Choisy Sr23 {955}. |
SR30
| Synonym | SrW |
| Chromosome | 5DL |
| i | Sr30/7[*] LMPG - Lines 1, 2, and 3 {685}. |
| Varieties | Festiguay {688}; Mediterranean W1728 {1369}; Webster {688}. |
| Varieties (alt.) | HD2009 Sr2 {10632}; Klein Cometa Sr8b {1368}; |
Relatively common in Australian and Mexican wheats. Various unnamed accessions {
208}, {
1321}.
SR31
| Note | Derived from S. cereale cv. Petkus. See also Reaction to P. striiformis, Yr9 : Reaction to P. triticina, Lr26
1B = T |
| Chromosome | 1BL |
1RS = T1BL.1R#1S {
389} or 1R(1B).
SR32
| Note | Derived from Ae. speltoides . 2A {939}, {1304} = T |
| Chromosome | 2AL |
SR33
| Synonym | SrSQ {650} |
| Chromosome | 1DS |
| Chromosome | 1DL |
| Varieties | RL 5405 = Tetra Canthatch/ Aegilops squarrosa RL 5288 {650}. |
| dv | Ae. tauschii PI 603225 {11012}; TOWWC0153 = TA2466 {11685}. |
| Marker associations | linked with Gli-D1 ; Xmwg60-1D **– |
SR34
| Note | Derived from Ae. comosa . 2A {967} = T2AS-2M# |
| Chromosome | 1L |
SR35
| Synonym | SrTm1 {1522} |
| Chromosome | 3AL |
| Chromosome bin | 3AL8 0.85-1.00. |
| i | Marquis*5/G2919 {10876}. v,tv: Tetraploid and hexaploid derivatives of T. monococcum {957}. |
| dv | DV92 Sr21 {10876}; G2919 Sr21 {10876}; T. monococcum C69. 69 Selection {957}; G2919 {957}. |
| Marker associations | Sr35 was mapped to a 5.1 cM interval between XBF483299 and XCJ656351 in diploid wheat{10712}; Mapped in diploid wheat to a 2.2-3.1 cM region |
| c | Sr35 is a CC-NBS-LRR gene {10988}. |
Sr35 was postulated in 21 accessions of
T. monococcum subsp.
monococcum {
11288}.
SR36
| Synonym | SrTt1 {949} |
| Chromosome | 2BS |
| i | Sr36/8[*] LMPG {685}. |
| Varieties | Arthur {939}; Arthur 71 {1324}; Flemink {1324}; GK Kincso {235}; Gouritz {1324}; Idaed 59; Maris Fundin {70}; Mengavi |
| Varieties (alt.) | Bass Sr26 {1450}; Combination III Sr9e {939}; Timson Sr5 Sr6 {939}. |
| Type varieties | T. Timopheevii {949}. |
| Marker associations | Xgwm42 **– |
Sr37
| Synonym | SrTt2 {949} |
| Chromosome | 4BL |
v,tv: T. timopheevii and derivatives {
949}, {
484}; Line W {
949}.
SR38
| Note | Derived from Ae. ventricosa . |
| Chromosome | 2AS |
6M[v ] = 2MS-6MS.6ML or 2MS-6ML.6MS {
0009}.
SR39
| Note | Derived from Ae. speltoides . = 2SL-2SS#2.2SL#2 {11037}. |
| Chromosome | 2B |
| Varieties | RL 5711 {651}, {646}. |
| Type varieties | Amphiploid RL 5347 = Ae. speltoides / T. monococcum {651}. |
| Marker associations | Sr39 is closely linked with Lr35 {651}; A SCAR marker was developed {9923}. |
Lines with shortened alien segments are reported in {
10741}. Although
Sr39 produces similar responses to
Sr32 , also derived from
Ae. speltoides , recombination studies based on three crosses showed independent inheritance {
646}.
Sr39 segregated independently of
Lr13 {
651}.
Sr39 may be present in DAS15 in combination with
Sr47 . A Ti2BL.2BS-2SS-2BS translocation {
10872} separated from
Sr47 in DAS15 could contain
Sr39 - see
SrAEs7t .
Further lines with shortened segments are described in {
11037} along with tightly linked co-dominant STS markers.
SR40
| Note | Derived from T. araraticum . 2BS {302} = T2BL/2G# |
| Chromosome | 2S |
| i | RL 6087 = RL 6071[*] 7/PGR 6126; RL 6088 = RL 6071[*] 7/PGR 6195 {302}. |
| Type varieties | T. araraticum PGR 6126 {302}; PGR 6195 {302}. |
| Marker associations | Xwmc661-2B **– |
SR41
| Chromosome | 4D |
| Varieties | WDR-B1 {1214}. |
| Varieties (alt.) | Waldron Sr5 (heterogeneous) Sr11 (heterogeneous) {1215}. |
SR42
| Chromosome | 6DS |
| Varieties | PI595667 {11087}. |
| Varieties (alt.) | Norin 40 Sr54 {938}; PI410954 Sr24 {11087}. |
| Marker associations | Xcfd49-6D **– |
SR43
| Note | Derived from Th. elongatum . 7DS-7el |
| Chromosome | 2S |
7el2L {
11076}. 7D. 7DL = T7DL-7Ae#2L.7Ae#2S {
389}, {
657}.
SR44
| Note | Derived from Th. intermedium . T7DS-7J# |
| Chromosome | 1L |
SR45
| Synonym | SrD {934}, SrX |
| Chromosome | 1D |
| Chromosome | 1DS |
| Varieties | 87M66-2-1 {894}; 87M66-5- 6 {897}; Thatcher + Lr21 , RL5406 {894}, {934}; Various backcross derivatives developed at PBI Cobbitty{1461}. |
| dv | Ae. tauschii RL5289 {894, 934}. |
| su | CS1D5406 {11134}. |
| Marker associations | Xgwm1061D/BE44426 – 1.82 cM – Sr45 – 0.39 cM – csssu45/Af45 {11134}. |
| c | . Sr45 encodes a 1,230 aa CC-NBSLRR protein {11213}. NCBI LN883757. |
Tests of natural and induced mutants of
P. graminis f. sp.
tritici indicated that
Sr45 had identical specificity to
Sr21 {
934}. One race distinguishing
Sr45 and
Sr21 is reported in {
11134}. Cloning of both
SR45 and
SR21 showed that the genes were different.
SR46
| Chromosome | 2DS |
| Chromosome bin | 2DS5-0.47-1.00. |
| Varieties | L-18913 / Meering selections R9.3 {10538}; R11.4 {10538}; R14.2 {10538}. |
| Varieties (alt.) | L-18913 = Synthetic Langdon / Ae. tauschii var. meyeri AUS 18913 Sr9e {10538}. |
| dv | Ae. tauschii var. meyeri AUS18913 {10538} = CIae 25 {11268}; Ae. tauschii TA1703 {11268}. |
| Marker associations | Co-segregation with RFLP Xpsr649-2DS at both the diploid and hexaploid levels {10538}; A PCR-based marker, csSC46 was developed from a BAC clone containing Xpsr649 |
| madv | Flanked by Xgwm1099-2D and Xbarc297-2D {11405}. |
| c | Cloned by AgRenSeq and map-based methods Sr46 has a CC-NBS-LRR structure {11405}. GenBank MG851023. Sr46 was more effective at higher temperatures in laboratory tests {11268}. |
| Note | Derived from Ae. speltoides. |
| Chromosome | 2BS |
2B = 2BL-2SL-2BL.2BS {
10549}.
SR48
| Synonym | SrAn1 {10565} |
| Chromosome | 2DS |
| Chromosome | 2AL |
| Chromosome bin | 2AL1-0.85-1.00 {10564}. |
| Varieties | Arina {10564, 10511, 10565}. |
| Varieties (alt.) | Arina Sr56 AUS 91457 {10851}. |
| Marker associations | Xgwm382-2AL **– |
SR49
| Chromosome | 5BL |
| Varieties | Mahmoudi AUS 28011 {10704}. |
| Marker associations | sun479 **– |
SR50
| Synonym | SrR {377} |
| Chromosome | 1DS |
| ad | CS + Imperial 1R {377}. |
| Varieties | Line T6-1 AUS 91434 {10745}. T1DL.1RS-DR.A1 {11316}. |
| al | S. cereale cv. Imperial. |
| Marker associations | Line T6-1 retains the rye marker AW2-5 {10745}. |
| c | GenBank KT725812, 3,508 bp. Sr50 encodes a CC-NBS-LRR protein homologous to the barley Mla gene {11316}. GenBank KT725812. In rye Sr50 may be allelic with |
Sr51
| Note | Homoeologous group 3 {10803}; 3S[S] S {10803} 3A ( |
| Chromosome | 3AL |
SR52
SR53
| Note | Derived from Ae. geniculata |
| Chromosome | 5D |
T5DS5DL-5M[g] L-5DL {
10789}.
SR54
| Chromosome | 2DL |
| Varieties (alt.) | Norin 40 Sr42 {10816}. |
| Marker associations | Xcfd-283-2D **– |
SR55
| Note | Adult plant resistance |
| Chromosome | 4DL |
| Chromosome bin | Distal to break point 0.56 FL{10678}. |
| i | RL6077=Thatcher*6/PI 250413 {10847, 10678}. |
| Varieties | Chapingo 48 {11070}. |
| Marker associations | Pleiotropic of closely linked with Lr67 and Yr46 and associated with Xgwm165-4D and Xgwm192-4DL {10847,10678}. |
| c | This multiple disease resistance locus was identified as a hexose transporter most similar to the STP13 family and containing 12 predicted transmembrane helices {11070}. |
Sr55 is pleiotropic or closely linked with Lr67 , Yr46 , Pm46 and Ltn3 .
SR56
| Note | Adult plant resistance |
| Synonym | QSr.sun-5BL {10565} |
| Chromosome | 5BL |
| Chromosome bin | 5BL1600.79-1.00. |
| Varieties | AF533 {10851}. |
| Varieties (alt.) | Arina Sr48 AUS 91457 {138}. |
| Marker associations | Xsun209 (SSR) – 2.6 cM – Sr56 – 1.2 cM – Xsun320 (STS from wPt-7665) {10851}. |
In the earlier QTL analysis of an Arina/Forno population
QSr.sun-5BL accounted for 12% of the PVE {
10565}. In the present study of an Arina/Yitpi RIL population stem rust response segregated as a single gene. The response phenotype was 40-50 MS-S.
SR57
| Note | Adult plant resistance. |
| Chromosome | 7DS |
| Chromosome bin | 7DS4. |
| su | Lalbahadur(Perula7D) GID 5348503 and GID 5348496 {10648, 10861}. |
| Varieties | Chinese Spring {10861}; Wheat accessions with Pm38/Lr34/Yr18 , see Reaction to Blumeria graminis , Reaction to Puccinia striiformis , Reaction to Puccinia triticina , |
| Marker associations | See Reaction to Puccinia triticina . |
| c | Putative ABC transporter{10648}. |
SR58
| Chromosome | 1BL |
| Varieties | Lr46 Deletion Mutant 109 (GID 5349718) {10965}; Lr46 Deletion Mutant 111 (GID 5349716) {10965}. |
| su | Lalbahadur(Pavon 1B) (GID 519245) {10965}. |
SR59
| Note | Derived from Scale cereale 2D (T |
| Chromosome | 2DS |
SR60
| Note | 5A[m] S {11208}. |
| dv | PI 277130 {11385}; PI 277131-2 {11385}; PI 277135 {11385}; PI 306540 {11385}; PI 306545 {11385}; PI 306547 {11385}; PI 428158 {11385}; PI 435001 {11385}. |
| dv2 | PI 306540 Sr21 SrTm4 SrTm5 {11208}. |
| Varieties | PI 689563, PI 306540/Kronos/2/UC1361/4UC1201436 {11385}. |
| Marker associations | Pinb-5A[m] S …… GH724575/DK22976/CA5012332 – 0.25 cM – Sr60/LRRK123.1 – 0.19 cM – CJ942731/CJ884584 {11208}; GH724575 – 1.56 cM – Sr60/ LRRK123.1 – 0.52 cM |
| c | Sr60 from T. monococcum PI 306540 encodes a 724 amino acid protein with two putative kinase domains designated Wheat Tandem Kinase 2 ( WTK2 ) |
SR61
| Note | SrB {11337}. Derived from Th. ponticum 11397}. 6A = T |
| Chromosome | 6AS |
SR62
| Note | Sr1644-1Sh {11519}. 1BS = T1S[Sh] S.1S[Sh] L- |
| Chromosome | 1BL |
| Varieties | Zahir*4 / Ae. sharonensis AS_1644, JIC DPRM0081 {11524}. |
| Marker associations | Mapped in Ae sharonensis to a 480 kb interval on chr arm 1[Sh] S {11519}. |
| c | Cloned from Ae. sharonensis and validated in transformed wheat. Sr62 is tandom kinase with both domains required for function {11524}. Sr62 has a kinase-pseudokinse (tandom |
1DS (T1S[Sh] S.1S[Sh] L-1DL).
SR63
| Note | Adult plant resistance. QSrGH.cs-2AL {11554}. |
| Chromosome | 2AL |
| Type varieties | GH/M14 RIL49 XXXXX {11554}; GH/M14 RIL188 AUSXXXX {11554}. |
| tv2 | Glossy Huguenot Sr58 (syn QSrGH.cs1BL ) AUS2499 {11554}. |
| Marker associations | IWA200-KASP32429 – 2.7 cM – Sr63 – 3.0 cM – IWB4881-_ 2AL {11554}. |
SR64
| Note | Derived from Thinopyrum . 4D = T4DL·4J[S] S {10788}. |
| Varieties | KS93WGRC27 {404}; Mace (PI 651043) {11681}. 4D = T4DL·4DS-4J[S] S {11644}. |
| i | Line E*6/rec213 ( Sr64, Wsm1 ) = GSTR 527 {11644, https://npgsweb.ars-grin.gov/gringlobal/accessiondetail?id=2158211}. |
| Varieties | KS08WGGRC50 {11644, 10788}. |
| Marker associations | KASP markers developed in {11643}. |
SR65
| Note | SrH2 {11682}. |
| Chromosome | 1AS |
| Varieties | Hango-2 FLW6-Selection AGG95499WHEA {11682}. |
| Marker associations | KASP7944/ KASP11804 (2,3 Mb, CS REfSeq 2,1) – 2.6 cM – SR65 – 2.0 cM – KASP12147 / KASP21832 / sunCS265 {11682}. CHS21_002378110 bp, respectively. |
Temporay designations
| Varieties | SW55-1 {323}; SW56-1 {323}. |
| Varieties (alt.) | SW33-5 Sr9a Sr13 {323}; SW54-3 Sr9d Sr13 {323}. |
| Chromosome | 6DS |
| Varieties | AC Cadillac {10733}; AC Crystal {10733}; AC Foremost {10733}; AC Karma {10733}; AC Taber {10733}; AC2000 {10733}; Peace {10733}; |
| Marker associations | Lines with Bt10 {10733}; Xcfd49-6D **– |
| Chromosome | 4AL |
| Chromosome bin | 4AL4-0.8-1.00. |
| Varieties | Kenya Sunbird {11092}; Kenya Tai {11092}; ND643/2*Weebill1 GID6302736 {11092}. |
| Type varieties | ND643 {11092}. |
| Marker associations | Xwmc776-4A **– |
| Chromosome | 4DS |
| Varieties | Tugela {11722}. |
| Varieties (alt.) | PAN 3161 Sr57/Lr34 {11722}. |
| Marker associations | RHT-D1 – 12.8 cM – Xwmc-720-4D 1.8 cM – SRPan3161 – 1.8 cM – Xgpc8038Xwmc52/Xgpc7414/Xcfd23/Xpsp3103-4D {11722}. |
| Chromosome | 5BL |
| Type varieties | PI 94701 {11780}. |
| Marker associations | Mapped to a 0.17 cM region flanked by pku69124 and pku69228 and corresponding to 1.04 and 2.15 Mb in the Svevo REfSeq 1.0 and CSRefSeq |
| Varieties | PI 410966 {11180}. |
The marker profile for this gene was very similar to that of a line with Sr36 {11180, 10825}. Specificity tests were not reported.
| Chromosome | 2V |
| ad | TA7753 {11395}. |
| al | D. villosum TA10276 {11395}. |
| Note | Reccessive. 2A[m] L {11111}. |
| dv | Monogenic line TmS4-260 {11673}. |
| dv2 | T. monococcum PI306540 Sr21 Sr22b Sr60 {11111, 11673}. bin/contig: IWGS2ALcontig6401556. |
| Marker associations | BQ461276 **– |
| Note | SrSha7 {11057}; SrA2K {11691}; QSr.nc. |
| Chromosome | 6D |
| Chromosome | 6DS |
| Varieties | AGS2000 {11691}; Bai-Yu-Bao {564}; Beijing 9 {564}; Beijing 11 {564}; Digalu {11132, 11057}; Ember {11152}; Fertodi 293 {977}; Guard-1 {11152}; |
| Varieties (alt.) | Beijing 10 Sr5 {564}; PI 177906 Sr7b Sr28 {11419}; MD01W28-08-11 Sr31 {11691}. |
| Marker associations | SrTmp – 3.1 cM – IWB49086 {11419}. The possibility of this gene being present in a number of South African cultivars, including Betta = Klein |
| Varieties (alt.) | Prospect Sr11 {197}. |
| Chromosome | 1B |
| Varieties | Zdar {67}. |
| Note | Recessive. |
| Chromosome | 6AS |
| Varieties | Choteau / Mountrail Der. SXD 43 PI 681713 {11580}; Marruecos*2/CItr 8155 {11580}. |
| Type varieties | Alkabo 11580}; Renville {11580}. |
| tv2 | Grenora Sr13 {11580}; Munich Sr13 {11580}. |
| Marker associations | Co-segregation with KASP6ASIWB10558 {11580}. Also predicted in durum accessions Belzer, Dilse, Lloyd, Divide and Montrail {11580}. |
| Chromosome | 7DS |
| Varieties | Genetic stock to be designated {10936}. |
| dv | Ae. tauschii TA10171 {10936}. |
| Marker associations | Sr10171 **– |
| Synonym | SrTA10187 {11181} |
| Chromosome | 6DS |
| Varieties | Genetic stock to be designated {10936}. |
| dv | Ae. tauschii TA10187 {10936}. |
| Marker associations | Xcfd49-6D **– |
| Chromosome | 6DS |
| Varieties | CItr 105026 {11249}. |
| Marker associations | IWB36391/IWB34477 – 2.9 cM – Sr15026 – 3.0 cM – IWA4000 {11249}; IWB36391 – 0.4 cM – IWB262 – 2.6 cM – Sr15026 – 1.3 |
Sr10526 was detected with races QFCSC and TTTTF. When the same DH and RIL populations were tested with race TRTTF there was evidence for complementary resistance genes on chromosomes 6DS and 6AS, one of which was
Sr10526 . When the populations were tested in the field in Kenya with Ug99 races
QSr.abr-6AS.1 (R[2] = 0.1 – 0.3) was detected {
11249}.
Th. ponticum -derived, stem rust resistant line WTT34 with a T5DS.5DL-Th chromosome pair is reported in {
11783}.
Additional temporary designations are listed in {
1230}. Genotype lists: {
323}, {
970}, {
10270}, {
10511}, {
10697}. Complex genotypes: AC Taber:
Sr2, Sr9b, Sr11, Sr12 {
9905}. Centurk:
Sr5 {
979},
Sr6 {
979},
Sr8a, Sr9a {
979},
Sr17 {
979}. Chris:
Sr5 {
679}, {
1371},
Sr7a {
1371},
Sr9g {
1371},
Sr12 {
1371}. Egret:
Sr5 {
939},
Sr8a {
939},
Sr9b {
939},
Sr12 {
939}. FKN:
Sr2, Sr6, Sr7a, Sr8a {
791},
Sr9b {
791}. H-44:
Sr2, Sr7b {
677},
Sr9d {
677},
Sr17 . Hartog:
Sr2 {
127},
Sr8a, Sr9g, Sr12 {
939}. Hope:
Sr2 {
677},
Sr7b {
677},
Sr9d {
677},
Sr17 . Kenya Plume:
Sr2 {
1370},
Sr5 {
1370},
Sr6 {
1370},
Sr7a {
1370},
Sr9b {
1370},
Sr12 {
1370}
Sr17 {
1370}. Khapstein:
Sr2, Sr7a, Sr13 {
674},
Sr14 {
674}. Lawrence:
Sr2, Sr7b {
939},
Sr9d, Sr17 . Lerma Rojo 64:
Sr2, Sr6, Sr7b {
979},
Sr9a {
979}. Madden:
Sr2, Sr9b, Sr11, Sr13 {
842}. Manitou:
Sr5 {
679},
Sr6 {
679},
Sr7a, Sr9g {
965},
Sr12 {
939}. Mendos:
Sr7a {
939},
Sr11 {
879},
Sr17, Sr36 . Pasqua:
Sr5, Sr6, Sr7a, Sr9b, Sr12 . Gene
Lr34 acted as an enhancer of APR {
9905}. PI 362698:
Sr5, Sr8a, Sr12, Sr15?, Sr16 {
11347}. PI 362698:
Sr5, Sr8a, Sr12, Sr15?, Sr16 {
11347}. PI 60599:
Sr7a {
689},
Sr8a, Sr9b, Sr10 . Redman:
Sr2, Sr7b {
939},
Sr9d {
939},
Sr17 . Reliance:
Sr5 {
1308},
Sr16 {
1238},
Sr18 ,
Sr20 . Renown:
Sr2, Sr7b {
939},
Sr9d {
939},
Sr17 . Roblin:
Sr5, Sr7a? Sr11, Sr12. Selkirk:
Sr2 {
499},
Sr6 {
468},
Sr7b {
499},
Sr17, Sr23 {
950}. Thatcher:
Sr5 {
1308},
Sr9g {
965},
Sr12 {
939},
Sr16 {
1308}. Timgalen:
Sr5 (heterogeneous) {
1555},
Sr6 {
1555},
Sr8a, Sr36 . WW15 = Anza = Karamu = T4:
Sr5 {
939},
Sr8a {
939},
Sr9b {
939},
Sr12 {
939}.
QTL
Arina / Forno: Qsr.sun-5BL {
10565}; resistance contributed by Arina, associated with
Xglk356-5B , R[2] = 11-12% {
10565}.
Qsr.sun-7DS {
10565}; resistance contributed by Forno, associated with markers
XcsLV34 and
Xswm10 diagnostic for
Lr34/Yr18 {
10565}.
Avocet S / Pavon 76: RIL population of lines lacking
Sr26 :Five QTLs,
QSr.cim-3B(Sr2), QSr.cim1B(Lr46/Yr29/Pm39 region) and
QSr.cim-3D (R[2] =0.2) from Pavon 76;
QSr.cim-4B and
QSr.cim-5A from Avocet S {
10975}.
Carberry (Resistant in Canada) / AC Cadillac (Resistant in Canada and Kenya): DH population: QTLs effective in Kenya were located in chromosomes 2B, 5B, 7B and 7D, those effective in Canada were on 3B (
Sr2 ), 5A and 5B; those effective in Kenya and Canada were on 4B and 6D (
Sr2 ); both parents had
Lr34/Sr51 {
11040}
HD2009 / WL711: RILs: Three of several QTLs gave consistent effects across environments, viz.
QSr.sun-3BS , R[2] = 0.09-0.15, probably
Sr2, QSr.sun-5DL , R[2] = 0.2-0.44, probably
Sr30 , and
QSr.sun-7A , R[2] = 0.07-0.13, nearest marker
wPT-4515 {
10632}.
PBW343 (S) / Muu (I): RIL population:4 consistent QTLs were identified,
QSr.cim-2BS, QSr.cim3BS(Sr2) and
Sr.cim-7AS from Muu, and
QSr.cim-5BL from PBW343 {
11019}.
RL6071 / RL6058(R): RIL population: RL6058, a Tc backcross line with
Lr34/Sr57 is more resistant than Tc. Enhancement of resistance in both Kenya and North America was attributed to a QTL in the region
wPt5044 – Xgwm-2B in chromosome 2BL {
10902}.
Spark / Rialto: DH population: Sr5 and
Sr31 were derived from Rialto and
QDr.sun-3BS (
Xgwm10343B –
BS00010945 region and
QSR.sun-5A (
Xgwm445-5A – Xgwm205-5A region) were derived from Spark {
11231}.
Suppressor of Stem Rust Resistance 1
| Chromosome | 7DL |
| Varieties | Canthatch CTH-K RL5451 {11411}; Columbus {11417}; Katepwa {11417}. Other Canadian Thatcher derivatives {11417}. |
| Marker associations | Localised to a 1.3 cM genetic interval flanked by Xkwh239 and Xkwh281 {11412}. |
| c | TraesCS7D01G526100 . Encodes a mutant form of TaMed15b.D , a subunit of the Medicator complex {11412}. |
Disease: Stripe rust, yellow rust.
YR1
| Synonym | L {1622} |
| Chromosome | 2AL |
YR2
YR3
| Note | 1B {184}, {185}. |
| Chromosome | 2B |
| Chromosome | 5BL |
| i | Taichung 29*6/Vilmorin 23 {10370}. |
| Varieties | Bon Fermier {1431}; Nudif TP1 {1431}; Stephens {184,182}; Vilmorin 23 {10370}. |
| Varieties (alt.) | Argent Yr1 Yr4a Yr6 {1067}; Cappelle-Desprez Yr4a {851}; Druchamp Yr4a ; Hobbit Yr4a Yr14 {604}; Kinsman Yr4a Yr6 {604}; Mardler |
| Marker associations | Yr3 (YrV23) – Xwmc3562B , 9.4 cM {10370}. |
| Note | Chen and Line {182} found that a second gene in Hybrid 46 - presumably this gene was not located at the Yr3 locus. |
| Varieties (alt.) | Hybrid 46 Yr4b {851}. |
| Chromosome | 1B |
| Varieties | Minister {184}, {182}, {851}. |
| Varieties (alt.) | Cleo Yr2 {1430}; Maris Beacon Yr2 Yr4b {1459}. |
Undesignated allele. v: Enkoy {
50}; Vilmorin 23; Staring {
1430}.
YR4
| Note | 6B {184}, {185}. |
| Varieties | Vilmorin 23 {184}. |
| Varieties (alt.) | Argent Yr1 Yr3a Yr6 {1067}; CappelleDesprez Yr3a {851}; Druchamp Yr3a {182}; Hobbit Yr3a Yr14 {604}; Huntsman Yr2 Yr3a Yr13 {604}; |
| Chromosome | 6B |
| Varieties | Avalon {1160}; Opal {1431}; Staring {1430}. |
| Varieties (alt.) | Hybrid 46 Yr3b ; Maris Beacon Yr2 Yr3b {1459, 1160}; Nudif TP12 Yr3c {1431}; Stella Yr2 {1430}. Undesignated allele. [ YrRub {10720}]. |
YR6
| Synonym | B {1622} |
| Chromosome | 7B |
| Chromosome | 7BS |
| i | AVS+Yr6 {970}. |
| Varieties | Austerlitz {230}; Fielder {181}; Heines Kolben {1622}; Koga II {746}; Maris Dove {604}; Recital {230}; Takari {368}. |
| Varieties (alt.) | Argent Yr1 Yr3a Yr4a {1067}; Avocet (UK) Yr1 Yr2 {1459}; Cadenza Yr7 {11187}; Flamingo Yr2 {1430}; Heines Peko Yr2 {746, 877}; |
| Type varieties | Duilio {192}; Latino {192}; Norba {192}; Quadruro {192}; Rodeo (heterogeneous) {192}. |
| Marker associations | Xgwm577-7B – Yr6 , <0.4 cM {11187}; Narrowed to an ~60 kb region including Xgwm577 {11188}; Given the location of Xgwm577 the gene |
TraesCS2B01G488000
Allelism with
YR5a and
YRSP is reported in {
10759} but cloning indicated that
YR7 is not allelic with
YR5a and
YrSP (
Sr5b ) {
11351}.
| Note | Allelic with Yr5a and YrSp {10759} 2B {1429}, {612}. |
| Chromosome | 2BL |
| i | AVS+Yr7 {970}; Taichung 29*6/Lee {10371}. |
| Varieties | Present in many hexaploid wheats with Sr9g – see {965}; Brock {83}; Lee {877}; Nudif TP257 {1431}; PBW12 {1352}; Paragon {11351}. |
| Varieties (alt.) | Cadenza Yr6 {11187}; Donata Yr9 {1430}; Flevina Yr2 {1431}; Garant Yr2 {230}; Hardi Yr2 {230}; Lely Yr2 {1430}; Nudif |
| Type varieties | Iumillo {965}; but not present Acme and Kubanka which also carry Sr9g {965}. |
| Marker associations | Yr7 – Xgwm526-2B , 5.3 cM {10371}; Xwmc175A-2B – Yr7 , <0.4 cM {11187}. |
| c | Yr7 (Genbank MN273771) along with Yr5a and YrSP has a BED-LRR structure lacking a CC-domain {11351}. |
YR8
| Note | Derived from Ae. comosa . 2D = T2D-2M {1218} = T2DS-2M# |
| Chromosome | 1L |
YR9
| Note | Derived from S. cereale . See also Reaction to P. graminis, Sr31 : Reaction to P. triticina Lr26 1B= |
| Chromosome | 1BL |
| Chromosome | 1RS |
| i | AVS+Yr9 {970}. |
| Varieties | Almus {998}; Aurora {1623}. |
Chromosome status not specified Baron {
83}; Benno {
998}; Bezostaya II {
998}; Branka {
71}; Clement {1532, 1430}; Cougar {
0267}; Danubia {
68}; GR876 {
753}; Hammer {
83}; Iris {
68}; Kavkaz {
1623}; Kromerzhizhskaya {
1149}; Lyutestsens 15 {
1149}; Lovrin 10 {
998}; Lovrin 13 {
998}; Mildress {
1027}; Perseus {
998}; Predgornaya {
998}; Rawhide (heterogeneous) {
0267}; Riebesel 47/51{878, 1623}; Roxana {
68}; Sabina {
68}; Salmon {
998}; Sarhad 82 {
284}; Selekta {
68}; Shtorm {
1149}; Skorospelka 35 {
998}; Sleipner {
10038}; Solaris {
68}; St 2153/63 {
997}; Stuart {
83}; Veery {
986}; Weique {
1627}; Winnetou {
998}; Weihenstephan 1007/53 {
1623}.
TraesCS1B03G0003500 , TraesCS1B03G0003600 (CS RefSeq 2.1)
| Synonym | YrVav {0262} |
| Chromosome | 1BS |
| Chromosome | 1B |
| i | AVS+Yr10 {970}. |
| Varieties | AC Radiant {11167}; Crest {11304}; Jacmar {11145}; Moro {878}; PI 178383 {878}; QLD709 = Janz[*] 2/ T. vavilovii {0262}; T. spelta 415 {641}; |
| Marker associations | A SCAR marker was described in {0261}; QLD709 and T. spelta 415, both with white glumes, failed to amplify the SCAR sequence, but both |
| c | Yr10 has a CC-NBS-LRR structure. GenBank AF149112 {11145}. AF149112 ( Yr10CG ), TraesCS1B03G0000200, shown not to be the candidate gene {11304}. |
| c | A gene named YrNAM located 1.2 cM from ‘ YrCG ’, the original allegedly claimed Yr10 , but with common specificity, encoded an NLR with |
YR11
| Note | Adult plant resistance. |
| Synonym | R11 {1157} |
| Varieties | Joss Cambier {606}. |
| Varieties (alt.) | Heines VII Yr2 Yr25 see {970}. |
| Note | Adult plant resistance. |
| Synonym | R12 {1157} |
| Varieties | Fleurus {1158}; Frontier {1159}; Pride {1157}. |
| Varieties (alt.) | Armada Yr3a Yr4a {81, 1160}; Mega Yr3a Yr4a {1160, 1157}. |
| Varieties | Waggoner Yr3a Yr4a Yr6 {1158}. |
YR13
| Note | Adult plant resistance. |
| Synonym | R13 {1157} |
| Varieties (alt.) | Bounty Yr1 Yr3a Yr4a {1459}; Brigand Yr2 Yr3a Yr4a Yr14 {609}; Copain Yr3a Yr4a {1158}; Gawain Yr2 Yr3a Yr4a Yr14 {81}; |
YR14
| Note | Adult plant resistance. |
| Synonym | R14 {1157} |
| Varieties | Kador {1158}; Score {1157}; Wembley {610}. |
| Varieties (alt.) | Avalon Yr3b Yr4b {1459, 83}; Brigand Yr2 Yr3a Yr4a Yr13 {1459, 83, 609}; Galahad Yr1 Yr2 (heterogeneous) Yr3a Yr4a {1459, 83}; Gawain |
YR15
| Note | Adult plant resistance. |
| Chromosome | 2D |
| Varieties | Bersee {1604}; Cappelle-Desprez {1598}. |
YR17
| Note | 2AS-6M[v] . |
| Chromosome | 2AS |
6M[v] = 2MS-6MS.6ML or 2MS-6ML.6MS {
0009}.
YrHy1 {
11308},
YrMm58 {
11308}.
| Note | TraesCS7D03G0183600
Yr18 1362}. |
| Chromosome | 7DS |
| Chromosome | 7D |
| i | AVS+Yr18 {970}; Thatcher ( Yr7 ) near-isogenic lines with Lr34 including the 13 2-gene combinations reported in {434, 937}. |
| Varieties | Jupateco 73R; Lerma Rojo 64 {1375}; Libellula {11139}; Nacazari 76 {1375}; Strampelli {11139}; Tesia F 79 {1375}; Tonichi S 81 |
| Varieties (alt.) | Parula Yr29 {10281}; Penjamo 62 Yr6 (heterogeneous) {1375}; Saar Yr29 {10481}; Wheats with Lr34 (See Lr34 ); Others {1376}; Kauz |
| Marker associations | Complete linkage with Lr34 {937,1362}; Ltn {1361}; and Bdv1 {1363}; Xgwm120-7D – 0.9 cM – Yr18 – 0.7 cM – Xgwm295-7D {10259}. |
| c | See Lr34 ; Putative ABC transporter {10648}. This gene is identical to Lr34, Pm38 and Ltn and confers stem rust resistance in some genetic |
independent suppressor {
11101}. Libellula had an additional 4 QTL and Strampelli had an additional 3 QTL {
11139}.
Yr18 conferred seedling resistance to leaf rust when transformed into durum wheat {M10114}.
YR19
| Synonym | YrCom {183} |
| Chromosome | 5B |
| Varieties (alt.) | Compair Yr8 {183}. |
YR20
| Synonym | YrFie {181} |
| Chromosome | 6D |
| Varieties (alt.) | Fielder Yr6 {183}. |
YR21
| Synonym | YrLem {181} |
| Chromosome | 1B |
| Varieties | Lemhi {183}. A closely linked gene, also in Lemhi, conferred resistance to P. s. hordei {10450}. Both genes were mapped relative to RGAP markers. _Yr21 |
YR22
| Synonym | YrLe1 {183} |
| Chromosome | 4D |
| Varieties (alt.) | Lee Yr7 Yr23 {183}. |
YR23
| Synonym | YrLe2 {183} |
| Chromosome | 6D |
| Varieties (alt.) | Lee Yr7 Yr22 {183}. |
YR24
| Synonym | YrCH42 |
| Chromosome | 1BS |
| i | AVS+Yr24 {970}. |
| Varieties | Chuanmai 42 {10339}; Meering[*] 3/K733/ Ae. tauschii AUS18911 {952}; Neimai 836 {11259}. Synthetic 769 {10339}. |
| Type varieties | Decoy 1 {10339}; K733 {952}. |
| Marker associations | Gene order Yr15 – Yr24 – Xgwm11-1B {10112}; Xbarc187-1B – 2.3 cM – Yr24 – 1.6 cM – Xgwm498-1B {10339}. Yr24 is identical to Yr26 |
YR25
| Chromosome | 1D |
| Varieties | Carina {0010}; Hugenout {0010}; Strubes Dickkopf; TP1295 {158}; TP981 {158}; Tugela {314}; Tugela-DN {0010, 314}. |
| Varieties (alt.) | Carstens V Yr32 {10016}; Heines Peko Yr2 Yr6 {0010}; Reichersberg 42 Yr7 {0010}; Spaldings Prolific YrSP {10016}. Yr25 was predicted to be |
Identical to YR24 {10339, 11391}.
| Note | The earlier location of 6AS ( |
| Chromosome | 6AL |
TraesKAR2B01G0121530LC . TraesCSB02G182800 .
| Synonym | YrSk {928}; QYr.sgi-2B.1 {10184, 11232}. |
| Chromosome | 2BS |
| i | AVS+Yr27 {970}. |
| Varieties | Avocet 2B (= AvocetS + QYr.sgi-2B.1 ) {11593}. Ciano 79 {928}; Inquilab 91 {928}; Kauz {928}; McMurachy {928}; Opata 85 {928}; |
| Varieties (alt.) | Attila Yr27 {928}; Kariega Yr18 {11593}; Kauz and derivatives, Bakhtawar 94, WH542, Memof, Basribey 95, Seyhan 95 Yr9 Yr18 {10160}. |
| Marker associations | When analysed as a QTL, variation associated with the Yr27 locus was associated with RFLP markers Xcdo152-2B and Xcdo405-2B {928}. A Yr27 -specific molecular marker |
Many CIMMYT wheat lines {
953}. Recombination
Yr31 – Yr27 , 0.148,
Yr31 – Lr23 , 0.295 {
0325}.
YR28
| Note | [ YrAS2388 {10822, 11438}]; YrAet672 {11664}. |
| Chromosome | 4DS |
| Varieties | Synthetic = Altar 84/ Ae. tauschii W-219. Synthetic/Opata 85 SSD population. Genotype lists: {970}, {1325}. |
| dv | Ae. tauschii W-219 {1377}; CPI 110672 {11664}. |
| Marker associations | Close association with Xmwg634-4DS {1377}. |
| c | Yr28 has a CC-NBS-LRR structure, alternative splicing in the NBS region and duplicated 3’ UTR {11438}. GenBank MK73661 – MK73666 {11438}. |
Yr28 was present in all tested accessions of
Ae. tauschii ssp.
strangulata and some accessions of ssp.
tauschii {
11438}. Often suppressed in synthetic and derived wheat backgrounds.
Yr22 was also reported for chromosome 4D, but in the absence of an appropriate single gene stock and the unavailability of avirulent cultures in most laboratories, tests of linkage with
Yr28 are unlikely in the foreseeable future. Partial suppression of resistance in synthetic wheat derivatives carrying
Yr28 was associated with reduced transcript accumulation {
11664}.
YR29
| Note | Adult plant resistance {0119}. |
| Chromosome | 1BL |
| Sources / synonyms | Lalbahadur(Parula 1B) {10281}. |
| Varieties | Druchamp {11235}; Kundan {11248}. |
| Varieties (alt.) | Attila Yr27 {10281}; Parula Yr18 {10281}; Pavon F76 Yr6 Yr7 Yr30 {119}; Quaiu3 Yr30 {10943}; Saar Yr18 {10481}; Yr29 is completely |
YR30
| Note | Adult plant resistance {0120}. |
| Chromosome | 3BS |
| Varieties | Opata 85 {0120}; Parula {0120}. |
| Varieties (alt.) | Inia 66 YrA {0120}; Pavon F76 Yr6 Yr7 Yr29 {0120}; Quaiu3 Yr29 {10943}; Yr30 is closely linked with Sr2 and Lr27 {0120}. |
According to {
11773}
Yr30 is present in Yaco S, Zhou8425b, Napo 63 and Orofen.
YR31
| Chromosome | 2BS |
| Varieties | Pastor {0325}. |
| Marker associations | Recombination values: Yr31 – Yr27 , 0.148; Yr31 – Lr23 , 0.295; Yr27 – Lr23 , 0.131{0325}; Yr31 maps between Lr12 and Lr23 {10928}. |
YR32
| Synonym | YrCV {1430}, YrCv {939} |
| Chromosome | 2AL |
| i | Avocet S[*] 4/Carstens V {970}; Cook[*] 6/Carstens V {970}; CRW380 = Carstens V/3*Avocet S {10016}; Tres/6*/Avocet S {10016}. |
| Varieties | Anouska {1430}; Caribo {1430}; Consort {10021, 10023}; Cyrano {1430}; Danis {10023}; Deben {10283}; Hereward {10021, 10022}; Okapi {1430}; |
| Varieties (alt.) | Carstens V Yr25 {10016}; Felix Yr3 {1430}; Kraka Yr1 {10021, 10038}; Savannah Yr1 Yr2 Yr3 Yr4 Yr17 {10016}; Senat Yr3 {10016}; |
| Marker associations | Xwmc198-2A – 2 cM – Yr32 {10016}; Yr32 was coincident with one AFLP marker {10016}. |
YR33
| Note | More readily detected in seedling tests at elevated temperatures {10336}. |
| Chromosome | 7DL |
| Varieties | Batavia {10039}; EGA Gregory; Strezecki. |
| Marker associations | Linkage with Xgwm111-7D and Xgwm437-7D {10039}. |
YR34
| Synonym | Syn. Yr48 {11266} |
| Chromosome | 5AL |
| Varieties | AUSC {10040}; UC1110/PI610750 RIL#143 {11266}; AUS27492 {11720}; WAWHT2046 = AUS91389 {10040}. |
| Marker associations | Xgwm410.2-5A – 8.2 cM – B1 – 12.2 cM – Yr34 {10040}; Xgwm291-5A – 0.5 cM – B1 – 1.5 cM – Yr34/Xgwm410.2-5A/Xcfa21495A/KASP109/KASP6988/ etc. {11266}; |
segment that is present in genotypes Arina
LrFor and SY Mattis in the Wheat10+ Genome panel {
11602}. Associated with 5 markers {
11720}.
This gene confers a weak seedling resistance (IT 2C to 3C) and a strong adult plant resistance (0 to 10R)
{
10040} to Australian pathotype 134E16A+, but is not effective against Australian pathotype 110E143A+ {
10040}.
Yr34 is <1cM from the awn inhibitor
B1 {
11266}.
YR35
Yr36
| Note | Adult plant resistance. |
| Chromosome | 6BS |
| i | Yecora Rojo NIL PI 638740 {10138}. |
| Varieties | Burnside {11044}; Glencross {11044}; Glupro {10138}; Lilian {11044}; Shumai 1701 {11258}; Somerset {11044}; UC1041+Yr36 {10649}. |
| itv | UC1113 NIL PI 638741 {10138}. |
| Type varieties | RSL#65 {623, 10138, 10649}; T. dicoccoides FA-15 {10138}; T. dicoccum PI 415152 {M10058}. |
| Marker associations | Yr36 is between Xucw74-6B and Xucw77-6B and 3-7 cM proximal to Nor-B2 {10138}; Yr36 is closely linked to the high grain protein locus of _T. |
| c | ACF33182; Yr36 encodes wheat kinase-START-1 protein {10649}; WKS1 is absent in almost all modern tetraploid and common wheats {10649}; Sr36 was shown |
YR37
| Note | Derived from Ae. kotschyi . |
| Chromosome | 2DL |
| Varieties | Line S14 {10139}. |
| ad | Line 8078 {10139}. |
| al | Ae. kotschyi 617 {10139}. |
YR38
6A (6AL-6L[sh] .6S[sh] ) {
10224}.
YR39
| Note | HTAP resistance |
| Chromosome | 7BL |
| Varieties | Alpowa {10416}. |
| Marker associations | Closely linked to several RGAP markers {10416}. |
YR40
| Note | Derived from Ae. geniculata . 5DS( |
| Chromosome | 5DL |
YR41
| Synonym | YrCN19 {10228} |
| Chromosome | 2BS |
| Varieties | AIM {10228}; AIM6 {10228}; Chuannong 19 {10228, 10502}. |
| Marker associations | Complete linkage to a 391 bp allele of Xgwm410-2BS {10228}; Xgwm410-2B – 0.3 cM – Yr41 {10502}. |
YR42
| Note | Derived from Ae. neglecta . 6A = 6AL-6[Aen] L.6[Aen] S {10537}. |
| Varieties | Line 03M119-71A {10537}. |
| al | Ae. neglecta 155 {10537}. Associated with Lr62 {10537}. |
YR43
| Chromosome | 2BL |
| Varieties | IDO377s = PI 591045 {10673}; Lolo {10673}; many IDO377s derivatives {10673}. |
| Marker associations | Xwms501-2B – 11.6 cM – Xwgp110-2B – 4.4 cM – Yr43 – 5.5 cM – Xwgp103-2B – 12.8 cM – Xbarc139-2B {10673}. |
YR44
| Synonym | YrZak {10674} |
| Chromosome | 2BL |
| Varieties | Zak = PI 607839 {10674}. |
| Marker associations | XSTS7/8/Yr5 – 12.7 cM – Yr44 – 3.9 cM – Xwgp100 – 1.1 cM – Xgwm501-2B {10674}. |
YR45
| Chromosome | 3DL |
| Varieties | PI 181434 {10677}; PI 660056 {11024}. |
| Marker associations | Xbarc6-3D – 0.9 cM – Xwmc656-3D – 6.9 cM – Xwpl18-3D – 4.8 cM – Yr45 – 5.8 cM – Xwp115-3D {10677}. This gene is |
YR46
| Note | Adult plant resistance. |
| Chromosome | 4DL |
| Chromosome bin | Distal to 0.56. |
| i | RL6077 = Thatcher*6/PI 250413 {10678}. |
| Varieties | Chapingo 48 {11070}; PI 250413 {10678}. |
| Marker associations | Xgwm165-4D/Xgwm192-4D – 0.4 cM – Yr46/Lr67 {10678}. |
| c | This multiple disease resistance locus was identified as a hexose transporter most similar to the STP13 family and containing 12 predicted transmembrane helices |
{
11070}.
Pleiotropic or closely linked with
Sr55 and
Lr67
YR47
| Chromosome | 5BS |
| Chromosome bin | 5BS6-0.81-1.00. |
| Varieties | AUS28183 = V336 {10679}; AUS28187 {10679}. |
| Marker associations | Xgwm234-5B – 10.2 cM – Lr52 – 3.3 cM – Yr47 – 9.6 cM – Xcfb309-5B {10679}; Xcfb309-5B – Xsun480/Xmag705/Xfcp552-5B – 0.4 cM – Yr47 |
YR48
Adult plant resistance. [
Qyr.ucw-5AL {
10705}]. 5AL {
10705}.
YR49
| Note | Adult plant resistance. |
| Chromosome | 3DS |
| Chromosome bin | 3DS6-0.55-1.00). |
| Varieties | AvocetS[*] 3 / Chuanmai 18 AUS91433 {10746}. |
| Varieties (alt.) | Chuanmai 18 Yr18 {10746}. |
| Marker associations | Xgps7321-3D/Yr49 – 1 cM – Xgwm1613D {10746}. |
YR50
| Note | Derived from Th. intermedium . |
| Chromosome | 4BL |
| Varieties | CH233{10849}. |
| Marker associations | cent... Xbarc1096-4B – 8.0 cM – Yr50 – 7.2 cM – Xbarc-4B {10849}. The genetic distance between Yr50 and Yr62 was estimated to be 27.1±8.6 |
YR51
| Synonym | YrAW1 {10850} |
| Chromosome | 4AL |
| Chromosome bin | 4AL4-0.80-1.00. |
| Varieties | Line 5515 AUS 91456 {10850}. |
| Varieties (alt.) | AUS 278589 Yr57 {10850}. |
| Marker associations | Xowm45F3R304A – 1.2 cM – Yr51 – 2.5 cM – Xsun104-4A – 1.8 cM – Xgwm160-4A {10850}. |
YR52
| Note | Adult plant resistance. |
| Chromosome | 7BL |
| Chromosome bin | 7BL3-0.86-1.00. |
| Varieties | PI 183527 {10852}; PI 660057 = Avocet S/PI 183527 F4-41 {10853}. |
| Marker associations | Xbarc182-7B – 1.2 cM – Yr52 – 1.1 cM – Xwgp5258 – 5.7 cM – Xcfa2040-7B {10852}. |
YR53
| Chromosome | 2BL |
| Chromosome bin | 2BL3-0-0.35. |
| Type varieties | PI 480148 {10854}. |
| Varieties | Avocet S/PI 480148 F5128 {10854}. |
| Marker associations | Xwmc441-2B – 5.6 cM – Yr53 – 2.7 cM – XLRRrev/NLRRrev 350 – 6.5 cM – Xwmc149-2B {10853}; Yr53 was estimated to be 35 cM |
YR54
| Note | Adult plant resistance. |
| Chromosome | 2DL |
| Varieties | Yr54 RIL GID6032209 {10944}; Yr54 RIL GID6032334 {10944}. |
| Varieties (alt.) | Quaiu3 Yr29 Yr30 {10943, 10944}. |
| Marker associations | Yr54 – 0.4 cM – Xgwm301-2D {10944}. |
Yr54 could be the same as
Qyr.tam-2D in Alcedo {
10945}.
YR55
| Chromosome | 2DL |
| Varieties | Frelon Yr17 AUS 38882 {10953}. |
| Marker associations | Xmag4089-2D – 11.4 cM – Yr55 – 8.4 cM – Xmag3385-2D {10953}. |
YR56
| Synonym | Qyr.sun-2A {10955} |
| Chromosome | 2AS |
| Chromosome bin | Tentatively 2AS5-0.78-1.00 {10955}. |
| Type varieties | AUS 91575 {10955}; Wollaroi (AUS 99174) {10955}. |
| Marker associations | Xbarc212-2A – 3.7 cM – Xbarc124-2A – 2.1 cM – Xsun167-2A – 5.7 cM – Yr56 – 7.6 cM – Xsun168-2A – 5.0 cM _– |
YR57
| Synonym | YrAW2 {10963} |
| Chromosome | 3BS |
| Chromosome bin | 3BS8-0.78-1.00. |
| Varieties | AUS 91463 {10963}. |
| Varieties (alt.) | AUS 27858 Yr51 {10963}. |
| Marker associations | sts3B15 – 4.5 cM – BS00062676 – 2.3 cM – Yr57 – 2.0 cM – Xgwm3893B – 2.0 cM – Xbarc75-3B {10963}; Bs0006276 – 0.3 |
YR58
| Note | Adult plant resistance. [ QYr.sun-3BS {10964}] |
| Chromosome | 3BS |
| Chromosome bin | 3BS7-0.87-1.00. |
| Varieties | Sonora W195 AUS 19292 Yr46 {10964. |
| Marker associations | 1121669/3023704 – 3.9 cM – Yr58 – 4.6 cM – 100016328/123392 {10964}. |
YR59
| Note | Adult plant resistance. |
| Chromosome | 7BL |
| Chromosome bin | 7BL-0.86-1.00. |
| Varieties | Avocet S/PI 178759 F4158 {10967}; PI 660061; PI 178759 {10966}. |
| Marker associations | Xwmc557-7B – 2.2 cM – Xwgp5175 – 2.1 cM – Yr59 – 1.1 cM – Xbarc32 – 0.5 cM – Xbarc182-7B {10966}. Yr59 can be |
seedling tests {10966, 10967}. Yr59 is a highly effective HTAP resistance gene. Crosses with lines possessing Yr39, Yr52 or YrZH84 previously reported on chromosome 7BL segregated, indicating that they are at different loci. However, the allelism test data were based on F2 phenotypes only. The linkage order of these genes is (proximal) Yr39 – 31.2 cM – Yr52 – 5.4 cM – YrPI178759 – 6.0 cM – YrZH84 (distal).
YR60
| Chromosome | 4AL |
| Varieties | Almop, Avocet*3//Lalbmono 1B*4/Pavon GID 5934039 {10968}. |
| Varieties (alt.) | LB(Pavon1B) Yr29 {10968}. |
| Marker associations | Xwmc313/Xwmc219-4A – 0.51 cM – Yr60/Xwmc776-4A {10968}. |
Yr60 was estimated to be about 10 cM distal to Yr51
YR61
| Synonym | Yrpd34 {10970} |
| Chromosome | 7AS |
| Varieties | Pindong 34 {10970}. |
| Marker associations | Xwgp5765b – 3.9 cM – Yr61 – 1.9 cM – Xwp5467 – 12.5 cM – Xcfa2174 {10970}. |
YR62
| Note | Adult plant resistance. |
| Chromosome | 4BL |
| Chromosome bin | 4BL5-0.86-1.00. |
| Varieties | PI 192252 {11023}; PI 660060 = Avocet S/PI 192252 F4-103 {11024}. |
| Marker associations | IWA3611-4B – 0.8 cM – IWA4041-4B – 0.8 cM – IWA2171-4B – 0.7 cM – IWA99-4B – 1.0 cM – IWA1923-4B – 1.2 cM _– |
YR63
| Chromosome | 7BS |
| Chromosome bin | 7BS1-0.27-1.00. |
| Varieties | AUS 27955 {11027}. |
| Marker associations | IWB33120 – 0.9 cM – Yr63 – 1.5 cM – IWB52844 – 10.5 cM – Xwmc606-7B {11027}. sunKASP401_ (0.6 Mb, CS RefSeq 2.1) – 2.1 |
YR64
| Chromosome | 1BS |
| Chromosome bin | 1BS9-0.84-1.00. |
| Varieties | PI 660064 = Avocet S/PI 331260 {10967}. |
| Type varieties | PI 331260 {11030}. |
| Marker associations | Xbarc8-1B – 0.6 cM – Xbarc119-1B – 6.5 cM – Xgwm413-1B – 3.5 cM – Yr64 – 2.0 cM – Xgdm33-1B – 5.0 cM _– |
YR65
| Chromosome | 1BS |
| Chromosome bin | 1BS10-0.5-centromere. |
| Varieties | AvS/PI 480016 F7-12 {11030}. |
| Type varieties | PI 480016 {11030}. |
| Marker associations | Xbarc119-1B – 6.5 cM – Xgwm413-1B – 5.5 cM – Xgdm33-1B – 4.6 cM – |
Xgwm498-1B – 3.5 cM
– Xbarc187-1B – 2.8 cM
– Xgwm273-1B – 3.7 cM
– Xgwm18-1B – 1.2 cM
– Yr65 – 2.1 cM
– Xgwm11-1B – 2.1 cM
– Xbarc137-1B – centromere {
11030}.
YR66
| Synonym | YrVL1 {11032} |
| Chromosome | 3DS |
| Chromosome bin | 3DS6-0.55-1.00. |
| Varieties | AGG91584WHWA = MSP4543.1 {11032}. |
| Varieties (alt.) | VL Gehun 892 = AGG91586WHEA Yr67 {11032}. |
| Marker associations | KASP18087 (3.550 Mb) – 2.1 cM – Yr66 – 0.6 vM – KASP48179 {11032}. |
YR67
| Synonym | YrC591 {11033}, YrVL2 {11032} |
| Chromosome | 7BL |
| Chromosome bin | 7BL10-0.78-1.00. |
| Varieties | AGG91585WHEA = MSP4543.4 {11032}; C306 {11032}; C591 {11032, 11033}. |
| Varieties (alt.) | VL Gehun 892 = AGG91586WHEA Yr66 {11032}. |
| Marker associations | Xbarc32-7B – 2.2 cM – Xcfa2040-7B – 8.0 cM – Yr67 – 11.7 cM – SC-P35M48 {11033}; KASP37096 (7.170 Mb) – 1.2 cM – Yr67_ |
YR68 CURATOR’S NOTE: publication could not be located.
| Note | Adult plant resistance. |
| Chromosome | 4BL |
| Chromosome bin | 4BL1-0.86-1.00. |
| i | AGG91587WHEA1 = csAvYr4BL = Avocet S*5/Undesignated International Nursery ex New Zealand Entry 03.25 {11051}. |
| Varieties | Undesignated International Nursery ex New Zealand 03.25 {11051}. |
| Marker associations | IWB74301 – 0.5 cM – Yr68/IWA4640 – 0.5 cM – IWB28394 {11051}. |
Yr69
| Note | Derived from Thinopyrum ponticum partial amphiploid Xiaoyan 7430. |
| Synonym | YrCH86 {11052} |
| Chromosome | 2AS |
| Chromosome bin | 2AS5-0.78-1.00. |
| Varieties | CH7086 {11052}. |
| Marker associations | Xwmc25-2A – 2.7 cM – X2AS33 – 1.9 cM – Yr69 – 3.2 cM – Xmag3807-2A {11052}. |
Linked with
Yr17 : (F2 seedling test) 30.0 cM {
11052}. No positive evidence for a
Th. Ponticum origin was prested.
YR70
| Note | Derived from Ae. geniculata |
| Synonym | YrUmb {11055} |
| Chromosome | 5DS |
| Varieties | IL393-4, T. durum cv. WH890 / Ae. umbellulata Pau 3732 // CS Ph[I] /3/2*WL711{11055}. |
| al | Ae. umbellulata Pau 3732 {11055}. |
| Marker associations | Yr70 – 7.6 cM – Xgwm190-5D {11055}; A co-segregating 450 bp Lr57-Yr40 -CAPS16 marker was present in IL393-4, but not in many Australian wheat |
Yr70 behaves as an allele of
Yr40 derived from
Ae. geniculata . The low infection types are also different. The introgression carrying the
Ae. umbellulata segment replacing terminal chromosome arm 5DS was 9.47 Mb with the break point between
TraesCS5D02G1600 and
TraesCS5G02G20010 {
11552}. Independent mutations indicated that
Yr70 differed from
Lr76 {
11552}.
YR71
| Note | Adult plant resistance. |
| Synonym | YrSA3 {11056} |
| Chromosome | 3DL |
| Varieties | AGG91588WHEA, Sunco/Avocet S RIL4667.153.11.1 {11056}. |
| Varieties (alt.) | Sunco Yr18 {11056}. |
| Marker associations | Yr71 – 1.6 cM – IWB17207/IWB10438/IWB23615/IWB63653 – 0.5 cM – IWB57983 – 0.9 cM – IWB23518 – 2.4 cM – Xgwm114b-3D – 5.6 cM _– |
YR72
| Synonym | YrAW4 {11059} |
| Chromosome | 2BL |
| Chromosome bin | 2BL5-0.59-0.89. |
| Varieties | AUS27506 {11059}; AUS27894 {11059}. |
| Marker associations | Xsun481-2BL ( wPt-665550 ) – 1.8 cM – Yr72 – 1.2 cM – IWB12294 – 1.5 cM – Xsun482-2BL ( wPt-7161 ) – 1.5 cM |
YR73
| Note | Complementary gene involved in the Yr specificity. |
| Chromosome | 3DL |
| Varieties (alt.) | Avocet R Yr74 {11063}; Anza = WW15 Yr74 {11062}; Banks R Yr74 {11063}; Condor R Yr74 {11063}; Egret R Yr74 {11063}; |
| Marker associations | Located and mapped by DarT-Seq markers {11062}. |
YR74
| Note | Complementary gene involved in the YrA specificity. |
| Chromosome | 5BL |
| Varieties (alt.) | Avocet R Yr73 {11063}; Anza = WW15 Yr73 {11062}; Banks R Yr73 {11063}; Condor R Yr73 {11063}; Egret R Yr73 {11063}; |
| Marker associations | Located and mapped by DarT-Seq markers {11062}. |
The cross Avocet R/Teal used to map Yr73 and Yr74 included a 5BL-7BL reciprocal translocation. Susceptible lines carrying the individual genes will be permanently accessioned after screening candidate lines for the Avocet R = Chinese Spring chromosome configuration. The translocated chromosomes are present in Teal and do not involve Yr74 .
Yr75
| Note | Adult plant resistance. |
| Synonym | YrAxe {11065} |
| Chromosome | 7AL |
| Chromosome bin | 7AL16-0.86-0.90. |
| Varieties | Axe/Nyabing-3 RIL#5 {11065}. |
| Varieties (alt.) | Axe Yr29 {11065}. |
| Marker associations | Xcfa2016-7A – 1.0 cM – Yr75 – 0.3 cM – IWB36240 {11065}. sunKASP429 / 428 – 0.1 cM – sunKASP-427 – 0.4 cM – Yr75 |
YR76
| Synonym | YrTye {186} |
| Chromosome | 3AS |
| Chromosome | 6D |
| Chromosome bin | 3AS4-0.45-1.00 {11067}. |
| i | AvS*4/Tyee{11067}. |
| Varieties | Tyee Citr 17773 {11067}. |
| Varieties (alt.) | ARS-Amber {11067}; Cara {11067}; Chukar {11067}); Hyak Yr17 (based on flanking markers) {11067}. |
| Marker associations | Xbarc321-6D – 6.2 cM – Xbarc57-6D – 4.3 cM – Xwmc11-6D – 2.6 cM – Yr76 – 3.4 cM – Xwmc532-6D – 6.9 cM _– |
| Note | Adult plant resistance. |
| Synonym | Qyr.ucw-6D {11174} |
| Chromosome | 6DS |
| Varieties | PI 322118 {11174}; PI 164377 {11174}; PI 388095 {11174}; PI 520350 {11174}; PI 623378 {11174}. |
| Marker associations | Yr77 was strongly associated with IWA167 in the region Xbarc54-6D (6DS) – 15.2 cM – IWA167 (6DS) – 3.9 cM – Xcfd188-6D (6DL ){11174}. |
Among the listed accessions two were from India, one from Pakistan, one from Iran, and one from the USA.
YR78
| Note | Adult plant resistance. |
| Synonym | Qyr.ucw-6B {11174} |
| Chromosome | 6BS |
| Varieties | Cadenza {11591}; Lancer {11591}; PI 519805 {11174}; Spelt PI 190962 {11591}; Nine others {11174}. |
| Marker associations | The Yr78 peak fell within a 4.3 cM interval, IWA7257 – Xwmc737-6B {11174}. Yr78 was mapped to a 0.05 cM interval including the un-assembled NOR-B2 |
According to {
11174}
Yr78 is identical to
QYr.wgp-6BS.1 in Stephens {
10602} and
QYr.sun-6B in Janz {
10751}.
YR79
YR80
| Note | Adult plant resistance. YrAW11 {11261}. |
| Chromosome | 3BL |
| Chromosome bin | 3BL2-C-0.22. |
| Varieties | AUS27284 {11261}. |
| Marker associations | Xgwm3763B – 15.2 cM – KASP5392/KASP65624 – 3.0 cM – Yr80 – 4.9 cM – KASP53113_ {11261}. |
YR81
| Note | Adult plant resistance. YrAW5 {11262}. |
| Chromosome | 6AS |
| Varieties | Aus27430/AvS RIL#16 {11262}. |
| Varieties (alt.) | AUS27430 Yr29 {11262}. |
| Marker associations | KASP3077 – 2.7 cM – Yr81 – 6.4 cM – Xgwm459-6A – 1.0 cM – KASP11315 {11262}. |
YR82
| Chromosome | 3BL |
| Chromosome bin | 3BL7-0.63-1.00. |
| Varieties (alt.) | AUS27969 = JI 1190592 Yr29 {11322}. |
| Marker associations | KASP13376/sunKASP301 – 0.4 cM – sunKASP300 – 2.0 cM – Yr82 – 2.0 cM – KASP8775 {11322}. |
YR83
| Note | 6A (T6AL· |
| Chromosome | 6RL |
| tr | T6AL·6RL C19.3 {11396}. |
| ad | Wheat + 6R {11396}; Wheat + 6RL {11396}. |
| su | CS + 6R(6D) {11396}. |
| al | Triticale accession T-701 {11396}. |
| Marker associations | Deletion mapping indicated that Yr83 was located in 6RL bin FL 0.73-1.00 containing PCR markers |
KU.86, TNAC1823, TNAC1826, and TNAC1844 {
11396}.
The only previously designated
Yr gene derived from
Secale cereale is
Yr9 from chromosome 1RS.
YR84
| Note | YrPI487260 {11585}. |
| Chromosome | 1BS |
YR85
| Note | YrTr1 {181}. |
| Chromosome | 1BS |
bin : 1BS18 (0.5).
YR86
| Note | Adult plant resistance. YrZM895 {11641}; _QYr.caas- |
| Chromosome | 2AL |
YR87
| Note | 6B (6B-6S[sh] ) {11683, 11684, 11712}. |
| Varieties | Line 6B-RY-32-3-14 {11683} = Line 42 {11684} = D42 {11712} = Genebank accession number to be advised . |
| al | Ae. longissima AEG-67822 {11712}; Ae. sharonensis AEG-548-4 {11712}. |
| c | The same NLR gene with a distinctive coiled-coil (CC) domain was cloned from each alien diploid accession {11712}. Development of lines with shortened 6S[sh] segments |
All 16 EMS-induced mutants in Line D42 were susceptible to both stripe rust and leaf rust {
11712}.
Sources of additional genes for seedling (designated “12”) and adult resistances (“13”, “14”, “15”) are listed in {
1430}.
Genotype lists: Chinese common wheats {
10369}. European wheats {
10579}. U.K. wheats {
10697}.
| Chromosome | 7BL |
| Varieties | Line 041133 {11675}. |
| Marker associations | Xicst23 (608.9 Mb, CS RefSeq 1.0) – 0.6 cM – Yr041133 – Xicst338 (609.7 Mb) {11675}. |
| Note | Refers to a phenotype specificity that appears to be controlled by complementary genes {1563}. |
| Varieties | Avocet[*] {[*] = heterogeneous}; Anza = Karamu = Mexicani =T4 = WW15; Banks[*] ; Condor[*] ; Cocamba; Egret[*] ; Inia 66; |
| Varieties (alt.) | Condor selection P44 Yr6[*] ; Pari 73 Yr6 ; Saric 70 Yr6 ; Yecora 70 Yr6 {1563}. The complementary genes are now |
| Chromosome | 5DS |
| Varieties | Ae. caudata derivative PAU16060 {11613}. |
| al | Ae. caudata PAU3556 {11613}. |
| Chromosome | 1BS |
| Varieties (alt.) | Alpowa Yr39 {10416}. |
| Marker associations | YrAlp – 15.2 cM – Xgwm18-1B – 1.1 cM – Xgwm11-1B {10416}; and more closely linked to RGAP markers {10416}. |
| Chromosome | 1AL |
| Varieties | Undesignated selection. |
| Varieties (alt.) | AS1676 Yr18 {11672}. |
| Marker associations | Located to a 1.7 cM region – 485.3 – 490.2 Mb where it co-segregated with 6 KASP markers {11672}. May be the same as YrXH-1AL |
| Varieties | Avocet R {11007}; Avocet S {11007}. This designation was used to describe an assumed resistance gene in both Avocet R and Avocet S, the |
| Chromosome | 1BS |
| Varieties | Synthetic CI142 = Gaza/Boy// Ae. tauschii 271 {10667}. |
| Marker associations | Located in the Yr24/Yr26 region close to Xbarc187-1B and Xgwm273-1B {10667}. Although postulated to be unique this gene is likely Yr24/Yr26 . |
| Note | Yr67 . |
| Chromosome | 7BL |
| Chromosome bin | 7BL3-0.85.1.00. |
| Varieties | C591 {10606}; Zhongzhi 1 {10606}. |
| Marker associations | Xcfa20-40-7B – 8.0 cM – YrC591 – 11.7 cM – SCP35M48 {10606}; Xmag1714-7B – 1.2 cM – – 0.4 cM – Xbarc182-7B {11099}. This |
| Note | Recessive. |
| Chromosome | 2AL |
| Varieties | Changfeng 75 {11646}. |
| Marker associations | Located in interval 577638 Mb (CS RefSeq v1.0, flanked by AX-1110060462 and AX-111004763 {11646}. |
| Chromosome | 4B |
| Varieties (alt.) | Clement Yr9 {186}. |
| Note | Temperature sensitive {10219}. |
| Chromosome | 2DS |
| Varieties | Cook Yr34 {10221, 10219, 10220}; Sunco Yr34 {10220}. |
| Note | Derived from S. cereale . 1B, 1BL, |
| Chromosome | 1RS |
| Varieties | Chuannong 17 {10686}; CN12 {10562}; CN17 {10562}; CN18 {10562}. |
| dv | S. cereale R14 {10686}. |
| al | S. cereale L155 {10562}. |
| Chromosome | 6A |
| Varieties | Druchamp {185}. |
| Chromosome | 1A |
| Varieties (alt.) | Daws YrDa2 {186}. |
| Chromosome | 5D |
| Varieties (alt.) | Daws YrDa1 {186}. |
| Chromosome | 6B |
| Chromosome | 5B |
| Varieties | Druchamp {184, 185}. |
| Chromosome | 6A |
| Varieties | Druchamp {184}. |
| Chromosome | 1BL |
| Varieties (alt.) | Express YrExp2 {10601}. |
| Marker associations | Xwgp78-1B – 4.2 cM – YrExp1 – 3.4 cM – Xwmc631-1B {10601}. |
| Chromosome | 5BL |
| Varieties (alt.) | Express YrExp1 {10601}. |
| Marker associations | Xgwm639-5B – 9.2 cM – Xwgp81-5B – 1 cM – YrExp2 – 0.7 cM – Xwgp82-5B {10601}. Based on the presence of the nearest flanking |
| Chromosome | 2B |
| Chromosome | 2BS |
| Varieties (alt.) | Francolin#1 Yr29 {11156, 11218, 11219}. |
| Marker associations | Xgwm374-2B – 2.0 cM – YrF – 1.8 cM – Xwmc474-2B {11219}. Francolin#1 is also released under the names Ufam and BARI Gom 27 {11156}. |
| Chromosome | 5AS |
| Chromosome bin | 5AS-0.4-0.98 {11781}. |
| Varieties | Flanders {11781}. |
| Marker associations | Xbarc56-5A 2.0 cM – YrF – 0.6 cM – AX108925494 {11781}. |
| Chromosome | 1AL |
| Varieties | H901414-121-5-5-9 {11100}. |
| Marker associations | Xwmc469-1A – 3.4 cM – YrHA – 4.6 cM – Xgwm497-1A {11100}. |
| Chromosome | 6A |
| Varieties (alt.) | Hybrid 46 Yr4b {184}. Not the same gene as YrDru2 {184}. |
| Note | Derived from Psathyrostachys huashanica . |
| Chromosome | 3AS |
| Chromosome bin | H9020-17-25-6-4 {11229}. |
| Marker associations | Xcfd79-3A – 7.2 cM – YrHu – 0.7 cM – BG604577 {11229}. |
| Chromosome | 1B |
| Varieties | Line 03031-1-5 (ex CIMMYT) {11303}. |
| Marker associations | Xgwm273-1B – 3.7 cM – Ax-109871410/Ax-109472792/Ax109352427 – 0.3 cM – YrH62 – 0.8 cM – Ax-109862469 – 2.1 cM Xbarc137-1B {11303}. |
| Note | Derived from Psathyrostachys huashanica . |
| Chromosome | 2DS |
| Varieties | H9020-1-6-8-3 {10979}. |
| al | Psathyrostachys huashanica 0503383 {10979}. |
| Marker associations | Xgwm102-2D – 3.8 cM – Xgwm4552D – 5.8 cM – YrH9020 – 4.4 cM – Xgwm261-2D – 2.3 cM – Xwmc503-2D – 0.6 cM _– |
| Chromosome | 4A |
| Varieties (alt.) | Heines VII Yr2 Yr25 {186}. |
| Chromosome | 2AL |
| Varieties | Jimai 22 {11195}. |
| Marker associations | Xgwm382-2AL – 1.0 cM – YrJ22 – 7.3 cM – IWA1348 {11195}; The mapped region was reduced to 0.3 Mb corresponding to 340.5 kb; |
| Note | QYr.nwafu-6AL {11696}. |
| Chromosome | 6AL |
| Varieties (alt.) | Jimai 44 Yr29 {11696}. |
| Marker associations | Mapped to a 3.5 cM interval flanked by AQP markers AX-109373479 and AX-109563479 {11696}. |
| Note | Adult plant resistance. |
| Chromosome | 2BS |
| Chromosome bin | 2BS-1. |
| Varieties | Kenya Kuku {11034}. |
| Marker associations | Xgwm148-2BS – 3.2 cM – YrKK – 1.8 cM – Xwmc474-3B {11034}. Resistance conferred by YrKK at the adult stage approached immunity. A slight effect |
| Chromosome | 7BL |
| Varieties | Lankao 5 {11252}. Xbrac267-7B – 4.4 cM – YrLk – 3.3 cM – Xwmc396-7B {11252}. |
| Note | Adult plant resistance. |
| Chromosome | 6BL |
| Varieties | Xwmc756-6B – 4.6 cM – YrLM168a – 4.6 cM – Xbarc146-6B {11284}. |
| Marker associations | Xwmc756-6B – 4.6 cM – YrLM168a – 4.6 cM – Xbarc146-6B {11284}. LM168a and LM168b are derivatives of Milan {11284}. |
| Chromosome | 4A |
| Varieties | Minister {184}. |
| Chromosome | 4B |
| Varieties (alt.) | Moro Yr10 {186}. |
| Marker associations | The development of an STS marker, derived from an AFLP fragment, that co-segregates with YrMor was reported in {357}. |
| Note | yrMY37 |
| Synonym | {11282} |
| Chromosome | 1B |
| Varieties | Mianmai 41 {11271}. |
A cross with AvS+Yr26 failed to segregate. Although claimed to be a possible allele of Yr24/Yr26 the gene identified is likely to be the same.
| Chromosome | 4A |
| Varieties (alt.) | Nord Desprez Yr3a Yr4a {184}. May be the same as YrMin {184}. |
| Chromosome | 3BS |
| Varieties | Lgst.79-74 {33}. |
| Marker associations | Xgwm493 (distal) - 21 cM – Yrns-B1 {33}; As a QTL, Yrns-B1 was located in a 3 cM interval between Xgwm493-3B and Xgwm1329-3B {10383}. |
| Chromosome | 5DS |
| Varieties | Ae. peregrina derivative PAU16058 {11614}. |
| al | Ae. peregrina PAU3519 {11614}. |
| Chromosome | 2BS |
| Varieties | P81{10696}; Xu29 {10696}. |
| Marker associations | Xgwm429-2B – 1.8 cM – YrP81 – 4.1 cM – Xwmc770-2B {10696}. |
| Chromosome | 5BS |
| Varieties | PI 1388231 {11543}. |
| Marker associations | sunKASP338 – 3.3 cM – YrPak – 3.5 cM – sumKASP341 {11543}. |
PI 1388231 also carried two genes for adult plant resistance, one of which was positive with
Lr46 marker
Lr46SNP1G22_ {
11543}.
| Synonym | QYr.uga-2AS {10914} |
| Chromosome | 2AS |
| Varieties | Pioneer 26R61 = PI 612056 {10914}. |
| Note | Derived from S. cereale 1B, |
| Chromosome | 1BL |
| Chromosome | 1RS |
| Varieties | R185 {10562}; R205 {10562}; R212 {10562}. |
| al | S. cereale R212 {10562}. |
| Chromosome | 3B |
| Varieties | Stephens {185}. |
| Chromosome | 2BL |
| Chromosome bin | 2BL0.89-1.00{10618}. |
| Varieties | S2199{10618}. |
| Marker associations | Xgwm120-3B – 11.0 cM – YrS2199 – 0.7 cM – Xdp269-2B {10618}. |
| Chromosome | 2B |
| Varieties | Stephens {184}. |
| Note | Stephens {184} |
| Chromosome | 3B |
| Chromosome | 5BL |
| i | Taichung 29*6/Strubes Dickkopf {11085}. |
| Varieties | Strubes Dickkopf {11085}. |
| Marker associations | Xwmc640-5B – 3.6 cM – YrSD – 2.4 cM – Xbarc59-5B – 3.0 cM – Xwmc783-5B {11085}. The authors concluded that this gene was different |
| Chromosome | 2BS |
| Chromosome bin | 2BL-C-0.5. |
| i | Cx1 = Avocet S*4/Spaldings Prolific {10018}. |
| Varieties (alt.) | Spaldings Prolific Yr25 {10018}. |
| Marker associations | IWA638 – 0.6 cM – YrSP – 1.5 cM – dp269-2 – 1.9 cM – Xwmc332-2B {11091}.MOVE TO YR5 |
| Note | Allelic with Yr5 and Yr7 {10759} |
| Synonym | YrSP {10018} |
| Chromosome | 2B |
Probably 2BL.
| Chromosome | 6D |
| Varieties (alt.) | Tres YrTr2 {186}. |
| Chromosome | 3A |
| Varieties (alt.) | Tres YrTr1 {186}. |
| Chromosome | 6D |
| Varieties | Tyee {186}. |
| Note | TuG1812G0500003718 . |
| Chromosome | 5AL |
| Chromosome bin | 5AL10-0.57-0.78. |
| dv | T. urartu PI 428309 {11494}. |
| Marker associations | Xgwm186-5A – 30.5 cM – Yru1 – 10.8 cM – Xgpw7007-5A , then fine mapped with 82 additional polymorphic markers {11494}. |
| c | Yru1 has as NBS-LRR structure with N-terminal ankyrin and C-terminal WRKY repeats {11494}. GenBank MT018453. |
The
Yru resistance allele was present in a number of
T. urartu accessions, but not in G1812 {
11494}.
| Note | Presumed to be Yr3a . |
| Chromosome | 2B |
| Varieties | Vilmorin 23 {10370}; Vilmorin {184}. Allelic but not the same as YrSte {184}. |
| Note | Recessive. |
| Chromosome | 3BS |
| Varieties | Wuhan 2 {11150}. |
| Marker associations | Xwmc540-3B – 5.9 cM – Yrwh2 – 10 cM – Xgwm566-3B {11150}. |
| Note | High temperature resistance. |
| Varieties | Mingxian 169/Xiaoyan 54 F3-4-14 {10829}. |
| Varieties (alt.) | Xiaoyan 54 Yrxy2 {10829}. |
| Marker associations | Xbarc49-7AS – 15.8 cM – Yrxy1 with closer flanking RGA markers {10829}. |
| Note | High temperature resistance. |
| Varieties | Mingxian 169/Xiaoyan 54 F3-4-30 {10829}. |
| Varieties (alt.) | Xiaoyan 54 Yrxy1 {10829}. |
| Marker associations | Xwmc794-2AS – 4.0 cM – Yrxy2 – 6.4 cM – Xbarc5-2AL {10829}. |
| Chromosome | 4B |
| Varieties (alt.) | Yamhill Yr2 Yr3a Yr4a {185}. |
| Chromosome | 4BL |
| Varieties | Zhoumai 22 {11563}. |
| Marker associations | XWGGB133 – 3.29 cM – YrGH22 – 2.63 cM – XWGGB146 {11563}. YrZH22 could not be distinguished from Yr50 based on map location. |
| Chromosome | 7BL |
| Varieties | Annong 7959 {10331}; Zhoumai 11 {10331}; Zhoumai 12 {10331}. |
| Varieties (alt.) | Zhou 8425B Yr9 {10331}. |
| Marker associations | Xwmc276-7B – 0.6 cM – Xcfa2040- – YrZH84 – 4.8 cM – Xbarc32-7B {10331}. |
3.22. Reaction to Puccinia triticina⌂ Home
Disease: Brown rust, leaf rust.
LR1
| Chromosome | 5D |
| Chromosome | 5DL |
| Chromosome | 1B |
| i | Centenario/6[*] Thatcher {317}; Malakoff/6[*] Prelude {317}; Wichita[*] 4/Malakoff {613}. |
| Varieties | Line 87E03-S2B1 {10561}; Centenario {317}; Chicora 'S' {143}; Daws (heterogeneous) {1019}; Dirkwin {1019}; Glenlea {976, 1255}; Halle 9H37 {74}; |
| Varieties (alt.) | Blueboy Lr10 {143}; Blueboy II Lr10 Lr24 {143}; Erythrospermum 142 and 953 Lr3 {74}; Laura Lr10 Lr34 {712}; Norka Lr20 {1552}; |
| dv | Several Ae. tauschii accessions {10191}. |
| Marker associations | Co-seg. with Xpsr5675D and Xglk621-5D in a Frisal/ Lr1 resistant line. pTAG621 was converted to a diagnostic STS{354}; Terminally located{10189}; In Ae. tauschii recombination |
| c | Lr1 is a member of a multigene family (PSR567), has a CC-NBS-LRR structure, and produces a protein of 1,344 aa, EF567063 {10561}. |
| Chromosome | 1B |
| Chromosome | 2DS |
| Synonym | Lr2 {47} |
| i | Prelude[*] 6/Webster {320}; Red Bobs[*] 6/Webster {320}; Webster/6[*] Thatcher RL6016 {306}; Wichita[*] 4/Webster {613}. |
| Varieties | EurekRRa CI 17738 {143}; Festiguay {843}; Webster CI 3780 {47}; Common in the Canadian Western Spring Wheat (CWSW) cultivars {11700}. |
| Varieties (alt.) | Alex Lr10 {976}; Ck 9835 Lr9 {10146}; Ck 9663 Lr2 Lr10 {10146}; Guard Lr10c {976}; James Lr10 {976}; Len Lr10 {976}; |
| Marker associations | Flanked by KASP markers kwm1620 (64.455 Mb, CS REFSeq 2.1.) and kwm1623 (64.760 Mb) {11700}. |
| Synonym | Lr2[2 ] {1409} |
| i | Prelude[*] 6/Carina {320}; Red Bobs[*] 6/Carina {320}; Thatcher[*] 6/Carina {320}; Wichita/4[*] Carina {613}. |
| Varieties | Carina {613}. |
| Synonym | Lr2[3 ] {1409} |
| i | Prelude[*] 5/Brevit {320}; Prelude[*] 6/Loros {320}; Red Bobs[*] 6/Brevit {320}; Red Bobs[*] 6/Loros {320}; Thatcher[*] 4/Brevit {320}; Thatcher[*] 6/Loros {320}; Wichita[*] 4/Brevit {613}; Wichita[*] 4/Loros |
| Varieties | Brevit {613}; Loros {1257, 317}. |
Because
Lr3 appears to be a complex locus {
486} Democrat and Democrat/6[*] Thatcher should be accepted as standards. There is evidence to suggest that the allele in Mentana, and therefore many derivatives, is
Lr3b {
939}. If this is correct, many genotypes listed under
Lr3a are likely to be
Lr3b . Durum cv. Storlom likely carries
Lr3a or
Lr3b {
10469}. Cv. Camayo was considered to have a closely linked gene, or
Lr3 allele {
10469}. Resistance in Storlom co-segregated with an STS derivative of
Xmwg798-6B . All three Thatcher NILs with named
Lr3 alleles carried the STS marker {
10469}.
| Synonym | Lr3 {47} |
| Chromosome | 6B |
| Chromosome | 6BL |
| i | Democrat/6[*] Thatcher {318}; Wichita[*] 4/ Mediterranean {613}. |
| Varieties | Belocerkovskaja 289 {74}; Bennett {1024}; Democrat {47}; Fertodi 293 {74}; Gage {1024}; Hana {68}; Homestead {1024}; Ilyitchovka {75}; |
| Varieties (alt.) | Amika Lr26 {76}; Bezostaya 1 Lr34 {74}; Bowie Lr14b {319}; Erythrospermum 142 & 953 Lr1 {74}; Istra Lr26 {76}; Mediterranean W1728 |
| Type varieties | Storlom {10469}. |
| Marker associations | Co-segregation with Xmwg798-6B {10469, 9921}; cDNA marker TaR16 was completely linked to Lr3 in a population of 109 gametes {10058}; UBC840 540 - Lr3a |
| Synonym | Lr3bg {486} |
| i | Thatcher[*] 6/Bage; RL6094 = Tc[*] 6/T6 {307}. |
| Varieties | Bage {486}. |
| Varieties (alt.) | T6 Lr16 {307}. Durum cv. Storlom likely carries Lr3a or Lr3b {10469}. Cv. Camayo was considered to have a closely linked gene, or Lr3 allele |
| Synonym | Lr3ka {486} |
| i | Tc[*] 6/Klein Aniversario. |
| Varieties | Blava {10345}; CI 13227 {11021}; Klein Aniversario {486}. |
| i | RL6062, Thatcher*6/PI 268316 {11054}. |
| Varieties | PI 268316 {11054}. |
| Varieties | Purdue Selection 3369-61-1-10 = Waban{365}; Not available as separate single-gene lines. Therefore, alleles at these predicted loci were never characterized. |
LR9
| Note | Derived from Ae. umbellulata . 6BL = T |
| Chromosome | 6BS |
LR10
| Note | A receptor-like kinase. The locus Xsfr1(Lrk10)-1A , detected by the probe Lrk10, is completely linked with Lr10 in chromosome |
| Chromosome | 1AS |
The gene encodes a receptor-like kinase with extracellular and kinase domains {
0297}. Using probe pLrk10-A, developed from the extracellular domain, 6
homologues were found in chromosomes 1A (1), 1B (3) and 1D (2) as well as group 1 chromosomes of
T. monococcum ,
Ae. tauschii and barley {0296, 0294}. Probes based on the kinase domain identified further homologues in chromosomes 3AS and 3BS as well as the corresponding regions in rice and maize {
0294}. Both orthologous and paralogous evolution were suggested.
LR11
| Synonym | LrBP2 {11074} |
| Chromosome | 2DS |
| Chromosome | 2A |
| i | Thatcher[*] 6/Hussar {306}; Wichita[*] 4/Hussar {613}. |
| Varieties | Bulgaria 88 {142}; Hart {1024}; Hazen {49}; Hussar {1409}; Panola {10830}; Pioneer 2850; Pocahontas {10146}; Saluda {10699, 10146}. |
| Varieties (alt.) | Buck Poncho Lr10 {11074}; Ck9803 Lr18 {10595}; FFR 524 Lr18 {10595}; Jamestown Lr18 {10830}; Karl 92 Lr3 Lr10 {2101}; Oasis |
| Marker associations | Lr11 – 0.3 cM – SCAR32/35 – 1.6 cM – Xgwm614-2D {11074}. |
LR12
| Note | Adult plant reaction. |
| Chromosome | 4B |
| Chromosome | 4BL |
| Chromosome bin | 4BL5-0.86-1.00. |
| i | Exchange/6[*] Thatcher {306}. |
| Varieties | Opal {306}. |
| Varieties (alt.) | AC Domain Lr10 Lr34 {228}; Caldwell Lr14a {10787}; Chinese Spring Lr34 {301}; Exchange Lr10 Lr16 {326}; Sturdy Lr13 {301}; Unknown |
| Marker associations | Xgwm251-4B – 0.9 cM – Lr12 – 1.9 cM – Xgwm149-4B {10951}. Possible commonality with Lr31 . |
**LR13** TraesCS2B01G182800 {11530, 11531}; also predicted in {
11529}.
| Note | Although originally described as a gene for adult plant reaction {032}, {326}, Lr13 can be detected at the seedling stage especially at high temperatures {939, |
| Synonym | LrZH22 {11467, 11468}; LrLC10 {11468} |
| Chromosome | 2BS |
| i | Tc[*] 7/Frontana = RL4031 {306}; fifteen Thatcher lines with 2-gene combinations {711}. |
| Chromosome bin | 2BS1-0.35-0.75. |
| Varieties | This gene is very widespread {939}; Hereward {288}; Hustler {608}; Kinsman {608}; Kenya Plume {1370}; Liaochen 10 {11468, 11530}; Manitou |
| Varieties (alt.) | AC Barrie Lr6 {10178}; Beaver Lr26 {1032}; BH1146 Lr34 {268}; Biggar Lr14a {712}; Chris Lr34 ; Columbus Lr16 {1258}; Cumpas |
| Marker associations | Xpsr912-2B – 9.1 cM – Lr13 – 7.9 cM – Xbcd1709-2B – 9.8 cM – Cent. {88}; Lr13 – 10.7 and 10.3 cM – Xgwm630-2BS |
| c | Encodes a CC-NBSLRR protein {11531; 11532} that is identical to that produced by one of the Ne2m haplotypes {11531}. |
GenBank MW756036 {
11532}.
Lr13 is an allele of the
YR27/NE2 locus {
11593}. Pleiotropic with the specific
Ne2m allele at the
NE2 locus.
| Synonym | LrLla {10520} |
| Chromosome | 7B |
| Chromosome | 7BL |
| Chromosome bin | 7BL10-0.78-1.00. |
| i | Selkirk/6[*] Thatcher {319}; Arina LrFor {11549}. |
| Sources / synonyms | CS[*] 6/Hope 7B {964}. |
| Varieties | Aotea {964}; Brigand {608}; Gala {964}; Glenwari {964}; Hofed {964}; Hope {964}; H-44 {964}; Lawrence {964}; Redman {964}; |
| Varieties (alt.) | Biggar Lr13 {712}; Brambling Lr23 Lr34 {10563}; Caldwell Lr12 {10787}; Genesis Lr13 {712}; Inia 66 Lr13 Lr17a {939}; Selkirk _Lr10 |
| Type varieties | Arcangelo {11015}; Bicre {11015}; Creso {11015}; Colosseo {11015}; Italo {11015}; Lloreta INIA {10520}; Plinio {11015}; Somateria {10520}. |
| Varieties (alt.) | Forno Lr34 Lr75 {11549}. |
| Marker associations | Xwmc273-7B – 13 cM – Lr14a – 10 cM – Xgwm344-7B {10520}; Xwmc10/Xgwm344/wPt1085-7B – 1.1 cM – wPt4038-HRM – 0.1 cM – Lr14a – 1.0 |
The
Lr14 region in tetraploid wheat harbours
Qlr.ubo-7B.2 , a gene that confers durable resistance in durums {10734, 10736} and that is present in many Italian, CIMMYT and ICARDA durum cultivars {
10736}. The relationship of this gene described as
Lr14c (reference genotype Creso) in {
10735} remains to be determined. Reasons for considering
Lr14c as a unique allele are given in {
10735} but according to {
11518} the gene sequence in Creso is identical to that of
Lr14a . In association mapping the presence of
QLr.ubo-7B.2 was predicted with 96% accuracy based on appropriate alleles of
Xcfa2257.2, Xgwm344.2 and
Xwmc10 in the distal region of chromosome 7BL {
10736}.
| i | Maria Escobar/6[*] Thatcher {319}. |
| Varieties | Weebill 1 {10571}. |
| Varieties (alt.) | Bowie Lr3 ; CI 13227 Lr68 {10817}; Maria Escobar Lr17 {319}; Rafaela Lr17 {314}. |
Most accessions with
Lr14b , including the Tc NILs probably carry APR gene
Lr68 {
10817} which could be the same as
QLr.osu-7BL {
10817}. A marker based on the
Lr14a sequence failed to amplify a product in the Tc+14b NIL {
11549}.
| i | Lr14a/6[*] Thatcher//Lr14b/6[*] Thatcher Seln {319}. |
LR15
| Note | 2DS {942}, {843}. |
| i | Thatcher[*] 6/Kenya W1483 {306}. |
| Chromosome bin | 2DS1-0.33-0.47. |
| Varieties | Kenya W1483 {843}. |
| Marker associations | Xgwm4562-2D – 3.1 cM – Lr15 – 9.3 cM – Xgwm102-2D {11234}; Xwmc764-2B – 9.4 cM – Lr16 – 1.4 cM – Xwmc661-2B {11219}. Probably |
| Note | The following chromosome locations are consistant with the finding that the first location was based on the use of a Rescue monosomic series. Rescue differs |
| Synonym | LrE {31} |
| Chromosome | 4B |
| Chromosome | 2BS |
| i | Exchange/6[*] Thatcher {306}; RL6096 = Tc[*] 6/T6 {307}. |
| Varieties | AC Domain {10170}; AC Foremost {10170}; Arapahoe {2101}; Brule {2101}; Ciano 79 {1373}; Etoile de Choisy {74}; Imuris 79 |
| Varieties (alt.) | AC Barrie Lr13 {10178}; Columbus (heterogeneous) Lr13 {1258}; Exchange Lr10 Lr12 {31}; Kenyon Lr13 {300}; Francolin#1 Lr46 {11219}; Selkirk Lr10 Lr14a {31}; |
| Marker associations | Distally located: Lr16 – Xwmc764-2 , 1, 9 and 3 cM, respectively, in crosses RL4452/AC Domain, BW278/AC Foremost and HY644/McKenzie {10189, 10170}. |
A recessive gene LrCH1539 in accession CH1539, flanked by markers scau2BS81 (6.227 Mb, CS RefSeq 1.0) and scau2BS47 (7.006 Mb) was located at the same position as Lr16 {11680|.
LR17
| Synonym | Lr17 |
| Chromosome | 2A |
| Chromosome | 2AS |
| Chromosome bin | 2AS-5 {10572}. |
| i | Klein Lucero/6[*] Prelude {318}; Klein Lucero/6[*] Thatcher {318}; Maria Escobar/4[*] Thatcher {318}. |
| Varieties | CDS Stanley {11579}; EAP 26127{314}; Jagger {10346}, {338}, {10146}; Jupateco {939}; Klein Lucero {318}; Mace {11579}; Santa Fe {10830}; TAM111 |
| Varieties (alt.) | Fuller Lr39 {10699}; Inia 66 Lr13 Lr14a ; Jagger Lr37 {11328}; Lerma Rojo 64 Lr13 Lr34 {1373}; Maria Escobar Lr14b {318}; |
| Marker associations | Xbarc123-2A – 4.8 cM – Xgwm636-2A – 4.0 cM – Lr17a {10571}; Xgwm614-2A – 0.7 cM – Lr17a – Xwmc407-2A {10572}; Lr17a – 3.7 cM |
| Synonym | WBR2 {615}, LrH {970} |
| Chromosome | 2A |
| Varieties | Brock {260}; Harrier {1350}; Maris Fundin {1350}; Norin 10-Brevor, 14 {1350}; Norman {1350}. |
| Varieties (alt.) | Contra Lr13 {10345}; Hobbit Sib = Dwarf A Lr13 {1350}; Kalasz Lr13 {10345}; Riband Lr13 {10345}; Sarka Lr13 {10345}; Tarso |
LR18
| Note | Derived from T. timopheevii . Independently derived lines with Lr18 possess a unique N band terminally located in chromosome |
| Chromosome | 5BL |
Low seedling responses conferred by
Lr18 are most effective at 15-18C. With increasing temperatures the response becomes less effective and ineffective at 25-27C {
935}, see also, {
1614}. 5BL {
935} = T5BS.5BL-5G#1L {
389}.
LR19
| Note | Derived from Th. elongatum .
7DL = T |
| Chromosome | 7DS |
LR20
| Chromosome | 7AL |
| i | Thatcher+Lr20. |
| Sources / synonyms | CS[*] 5/Axminster 7A {1293}. |
| Varieties | Axminster {1175}, {1305}, {348}; Birdproof {1554}; Bonus {1554}; Converse {1554}; Festival {1554}; Kenora {1554}; Kenya W744 {1554}; Maris |
{
310}; Thew {140, 1552}; Timmo {
608}.
LR21
| Synonym | Lr40 {10415, 1200} |
| Chromosome | 1DL |
| Chromosome | 1D |
| Chromosome | 1DS |
| i | Thatcher[*] 6/Tetra Canthatch/ Ae. tauschii var. meyeri RL 5289 {306}. |
| Varieties | Barlow {11093}; Faller {11093}; Tetra Canthatch/ Ae. tauschii var. meyeri RL 5289, RL 5406 {648}; Lovitt {10766}; McKenzie {228, 10766}; Prosper {11093}; |
| Varieties (alt.) | AC Cora Lr13 {713}; WGRC16 = TAM107*3/ Ae. tauschii TA 2460 Lr39 {10415}, {220}. |
| dv | Ae. tauschii accessions: RL5289 = TA1599{1241}; Ae. tauschii TA2460 Lr39 {10415}, {220}; TA1649 {299}; TA1691 {299}; TA2378 {299}; TA2470 {299}; TA2483 |
| Marker associations | All members of the Lr21 family carry a STS derivative of XksuD14-1D that has a resistance gene analogue structure {299}; XksuD14-1D was reported to map |
| c | Lr21 was cloned and shown to have a NBS-LRR structure {10420}. Lr21 -mediated resistance requires expression of RAR1, SGT1 and HSP90 {11274}. |
A reconstituted effective
Lr21 allele (designated
Lr21-b ) was obtained as a rare (1/5,872) recombinant (accession TA4446) between
Lr21 pseudogenes in common wheat cultivars Fielder and Wichita {
10620}. Further haplotype analyses are reported in {
10766}.
A further spontaneous allele designated
Lr21-tbk with ‘several mutations in exons 2 and 3’ leading to three amino acid changes was identified cv. Tobak {
11762}.
LR22
| Note | Adult plant reaction. |
| Chromosome | 2DS |
| i | Neepawa*6/RL5404, RL4495 {10467}; Thatcher[*] 3//Tetra Canthatch/ Ae. squarrosa var. strangulata RL 5271 {306}; Thatcher*7//TetraCanthatch/RL5271, RL 6044 {10467}; CH Campala Lr22a {11209}. |
| Varieties | Line 98B34-T4B {10467}; Tetra Canthatch/ Ae. squarrosa var. strangulata RL 5271, RL 5404 {311}. |
| Varieties (alt.) | AC Minto Lr11 Lr13 {713}. |
| dv | Ae. squarrosa var. strangulata RL 5271. |
| Marker associations | Xgwm296-2DS – 2.0 cM – Lr22a {10446}; Xgwm455-2D – 1.5 cM – Lr22a – 2.9 cM – Xgwm296-2D {10467}; Xgwm455-2D **– |
| Note | Adult plant reaction. |
| Varieties | Canthatch {298}; Marquis {970}; Thatcher {298}. This gene will be present in near-isogenic lines based on Thatcher. |
LR23
| Synonym | LrG {951} |
| Chromosome | 2BS |
| i | Lee FL 310/6[*] Thatcher {948}. |
| Sources / synonyms | CS[*] 7/Kenya Farmer 2B {948}; CS[*] 6/Timstein 2B {948}. |
| Varieties | BT-Schomburhk {11601}; Cranbrook; Crim {1091}; Hope/Timstein {1091}; I 310678 {1091}; I 310685 {1091}; I 349162 {1091}; IWP94 {10569}; |
| Varieties (alt.) | Gamenya Lr3 {1552}; Gabo Lr10 {1552}; Kenya Farmer Lr10 {1552}; Lee Lr10 {1552}; Pastor Lr46 {10928}; Timstein Lr10 {1552}; Brambling _Lr14a |
| Type varieties | Altar 84 {1058}: Gaza {11601}; Tamoroi {11601}. |
| Marker associations | Associated with Xksu904(Per2)-2B {90}; SSR and KASP markers were developed in {11601}. A QTL, which is likely to correspond to Lr23 , was identified |
LR24
| Note | Derived from Thin. elongatum .
Always present with Sr24 {956}. See Sr24 (Reaction to P. graminis ). |
| Synonym | LrAg {141} |
| Chromosome | 3DL |
| i | Tc+Lr24 (ex Agent). |
| Varieties | Cody {1284}; Cutter {10595}; Jagalene {10595}; McCormick {10595}; Ogallala {10595}; Osage {143}; Payne {1390, 1024}; SST 23 {1324}; |
| Varieties (alt.) | Blueboy II Lr1 Lr10 {141}; Fox Lr10 {141}; Lockett Lr9 {10146}; Parker 76 Lr10 {1024, 143}; Siouxland Lr26 {1283}. |
| Marker associations | Co-seg of Lr24 in Agent with 8 RFLP markers; segment in Sears' 3D-3Ag#1 is shorter than in Agent {48}; Tagged with Xpsr1203-6B {1271}; |
1BL {
185} = T1BL.1BS-3Ae#1L {
600}
LR25
| Note | Derived from S. cereale cv. Rosen. 4BS{389}, {271}, {270}, {380}. Revised to T |
| Chromosome | 4BS |
4BL-5RL {
543} and later to T4BS.4BL-2R#1L.
LR26
| Note | Derived from S. cereale . See also Reaction to P. graminis, Sr31 ; Reaction to P. striiformis, Lr26 . T |
| Chromosome | 1BL |
| Chromosome | 1RS |
1R (1B).
LR27
| Note | One of two complementary genes; the second gene, Lr31 , is located in chromosome |
| Chromosome | 4BS |
The following wheats have both
Lr27 and
Lr31 .
Lr27 is present in wheats with
Sr2 , but is not expressed in the absence of the complementary factor {
1366}. [
LrGt {
1366},
A {1058, 1366}]. 3BS {
1367}.
LR28
| Note | Derived from Ae. speltoides . 4AL {967} = T |
| Chromosome | 4AS |
LR29
| Note | Derived from Th. elongatum . 7DS {939} = T7DL-7Ae# |
| Chromosome | 1S |
| i | Sears' CS 7D/ Ag #11 {1300, 939}; RL6080 = Tc[*] 6/Sears' 7D/Ag#11 {316}. |
| Marker associations | Co-segregation with two RAPDs {1165}. |
LR30
| Note | Recessive {315}. |
| Synonym | LrT |
| Chromosome | 4AL |
| i | RL 6049 = Thatcher[*] 6/Terenzio {315}. |
| Varieties (alt.) | Terenzio Lr34 {315}. |
LR31
| Note | One of two complementary genes, the second gene is Lr27 . |
| Synonym | B {1058, 1366} |
| Chromosome | 4BL |
| Varieties | Ocoroni 86 {1373}. |
| Varieties (alt.) | Chinese Spring Lr12 Lr34 {1367}; See Lr27 for list of wheats with Lr27 +Lr31 . |
| Type varieties | Benimichi C2004 {10585}; Jupare C2001 {10585}. |
| Marker associations | A positive association with XksuG10-4B {1058}. |
Possible commonality with Lr12 .
LR32
| Chromosome | 3D |
| Chromosome | 3DS |
| i | RL6086 = Tc*7/RL5713/Marquis K {10874}; BW196 = Katepwa*6/RL5713/2*Marquis K {10874}. |
| Varieties | Tetra Canthatch/ Ae. tauschii RL5497-1, RL5713, |
LR33
| Chromosome | 1BL |
| i | RL6057 = Tc[*] 6/PI 58548 {325, 297, 321}. |
| Varieties | PI 268454a {297}; PI 58548 {325, 297}. |
| Varieties (alt.) | KU168-2 Lr34 {11687}; PI 268316 Lr2c Lr34 {297}; Others {1322}. |
| Marker associations | KASP markers flanking Lr33 in the centromeric region were identified in {11687}. |
| Note | In addition to conferring seedling and adult plant resistance, Lr34 responds in a complementary manner when combined with either Lr33 or LrT3 {321}. In the |
| Synonym | LrT2 {321} |
LR35
| Note | Derived from Ae. speltoides {651}. Adult plant resistance {651}. 2B {651} = 2BL-2SL2SS#2.2SL#2 {11037}. |
| i | RL6082 = Thatcher*7/RL5711 {11037}. |
| Varieties | RL5711 {651}. |
| Marker associations | A. SCAR marker was developed {9923}. |
Complete cosegregation between
Lr35 and RFLP loci
Xwg996-2B ,
Xpsr540-2B and
Xbcd260-2B was observed. The RFLP probe BCD260 was converted to a CAPS and STS marker {
0045}. Lines with shortened alien segments are reported in {
10741}.
Lines with shortened alien segments bearing
Lr35 are described in {
10741}.
LR36
| Note | Derived from Ae. speltoides . |
| Chromosome | 6BS |
| Varieties | CDC Bounty {11253}; Line 2-9-2 {292}; Line E84018 {292}. |
| al | Ae. speltoides Popn. 2 {292}. |
| Marker associations | Xcfd13-6 **– |
LR37
| Note | Derived from Ae. ventricosa . Recessive {667}. Lr37 can be detected in seedlings at low temperatures (17[o] C) and is effective in adult plants |
| Chromosome | 2AS |
6M[v] = 2MS-6MS.6ML or 2MS-6ML.6MS {
0009}.
VPM1 and derivatives: 2AS {
62} = 2AL.2AS-2N[v] S{
0213}
LR38
| Note | Derived from Th. Intermedium . 1DL = T |
| Chromosome | 1DS |
LR39
| Note | Derived from Ae. tauschii {02100}. Lr41 {215}. LrT {11207}. |
| Chromosome | 2DS |
| i | TC*4 / Overley, GSTR 447 {11498}. |
| Varieties | Amour {11086}; Bullet {11086}; Fuller {10595}; KS90WGRC10 = TAM107[*] 3/ Ae. tauschii TA2460 {220}; Overley {10595, 10699}; Postrack {10830}; PostRock {11093}; |
| Varieties (alt.) | Fuller Lr17a {10699}; WGRC16=TAM107*3/ Ae. tauschii TA 2460 {220}. |
| dv | Ae. tauschi PAU14195 {11207}; Ae. tauschii TA 1675 {2100}; Ae. tauschii TA2460 Lr21 {10415, 220}; Lr21 {10415,220}. **ma: |
LR41 Deleted , see LR39 .
| Chromosome | 1D |
| i | TC*4 / Century, GSTR 448 {11498}; Tc + Lr42 PI 701841 {J. Kolmer pers. com Feb 2023}. |
| Varieties | AR93005 {10840}; Fannin {10595}; KS93U50 {M22059}. |
| Varieties (alt.) | KS91WGRC11 |
LR44
| Chromosome | 1B |
| i | RL6147 = Thatcher[*] 6/ T. spelta 7831 {322}. |
| Varieties | T. spelta 7831 {322}; T. spelta 7839 {322}. |
LR45
| Note | Derived from Secale cereale . 2A = T2AS-2R# |
| Chromosome | 3S |
LR46
| Note | Completely linked with Yr29 {0119}. Adult plant resistance. |
| Chromosome | 1B |
| Chromosome | 1BL |
| Sources / synonyms | Lalbahadur(Pavon 1B) Lr1 {1364}; Lalbahadur(Parula 1B) {10281}. |
| Varieties | Attila {10281}; Kundan {11248}; Siete Cerros {10817}. |
| Varieties (alt.) | CI 13227 Lr3c ; Frontana Lr13 Lr14b Lr34 Lr68 {10817}; Pavon F76 Lr1 Lr10 Lr13 {1364, 119}; Parula Lr13 Lr34 {10281}; |
| Type varieties | Present in the following tetraploid wheats in combination with other genes/QTL: Bairds {11600}; Dunkler {M23032}; Heller#1 {M23032}. |
| Marker associations | An RFLP marker associated with Lr46 with a recombination value of about 10% was identified in{0119}; Xwmc44-1B – 1.4 cM – Xbac24prot – 9.5 cM |
LR47
| Note | Derived from Ae. speltoides {9901}. 7AS = Ti7AS-7S#1S- |
| Chromosome | 7AS |
| Chromosome | 7AL |
| Varieties | Bionta 2004 {10737}. Pavon derivative PI 603918 {9901}. Backsross derivatives based on Express, Kern, RS15, Yecora Rojo and UC1041 {0126, 11721}. Recombinants with reduced 7S#1 |
| c | Lr47 was identified as a CNL, which was also present Ae. speltoides accessions T2140002, Y162 and Y397 {11721}. |
7A = T7AS-7S#1S.7S#1L {
389}.
LR48
| Note | Adult plant resistance {0085}. Recessive {0085}. |
| Chromosome | 2BS |
| Chromosome | 4BS |
| i | CSP44 / 5*Lal Bahadur AUS91421 {0329}. |
| Varieties (alt.) | CSP44 Lr34 {0085}; Dove Lr34 {0329}. |
| Marker associations | Xgwm429b-2B – 6.1 cM – Lr48 – 7.3 cM – Xbarc7-2B {329}; RAPD markers flanking Lr48 at 2.7 and 8.6 cM are reported in |
Lr48 is closely linked with
Lr25 {
10738}. Based on haplotype analysis
Lr48 was postulated in 13 Australian Condor relatives {
11112}. The suggestion that this gene is present in 13 Australian varieties carrying
Lr48 markers and hence
Lr48 {
11172} needs verification.
LR49
| Note | Adult plant resistance {0085}. |
| Chromosome | 2AS |
| Chromosome | 4BL |
| i | VL404 / 5*Lal Bahadur Lr34 {0329}. |
| Varieties (alt.) | Tonichi Lr34 {0329}; VL404 Lr34 {0085}. |
| Marker associations | Xbarc163-4B – 8.1 cM – Lr49 – 10.1 cM – Xwmc349-4B {0329}; Xgwm251-4B – 8.6 cM – XsunKASP21 – 0.4 cM – Lr49_ – 0.6 |
LR50
| Note | Based on linkage with SSR markers. |
| Chromosome | 2BL |
| Varieties | KS96WGRC36 = TAM[*] 3/TA870 {0221}; U2657 = Karl 92*4/TA674 {0221}; U3067 = TAM107*4/TA874 {0221}; U3193 = TAM107*4/TA874 {0221}. |
| Type varieties | T. armeniacum TA870 {0221}; T. armeniacum TA145; TA874 {0221}; TA870 {0221}; TA895 {0221}. |
| Marker associations | Linked with Xgwm382-2B (6.7 cM) and Xgdm87-2B (9.4 cM) {0221}. |
LR51
| Chromosome | 1BL |
| i | Express[*] 7/T1 {0308}; Koln[*] 7/T1 {308}; UC1037[*] 7/T2 {0308}. |
| Varieties | Neepawa[*] 6/ Ae. speltoides F-7, selections 3 and 12 {306}; Interstitial translocations T1AS.1AL-1S#F712L-1AL {0308} = T1; T1BS.1BL-1S#F7L-1BL {0306}. |
| al | Ae. speltoides F-7 selections 3 and 12 {0306}. |
| Marker associations | Linked with RFLP markers Xmwg710-1B and Xaga7-1B {0308}; A CAPS marker was developed from XAga7-1B {0308}. |
LR52
| Synonym | LrW {309} |
| Chromosome | 5BS |
| Chromosome bin | 5BS6-0.81-1.00. |
| Varieties | AUS28183 = V336 {10679}; AUS18187 {10679}; Tc-LrW = RL6107 {10035}. |
| Varieties (alt.) | V618 Lr33 {309}; V336 Lr33 LrB {309}. |
Xgwm234-5B – 10.2 cM –
Lr52 – 3.3 cM –
Yr47 – 9.6 cM –
Xcfb309-5B {
10679};
Xcfb309-5B –
Xsun480/Xmag705/Xfcp552-5B – 0.4 cM –
Yr47 – 4.3 cM –
icg16c008/Xgwm234-5B {
11200};
Xsun180 – 0.4 cM –
Lr52 – 0.2 cM –
Yr47 – 1.4 cM –
Xgwm234-5B {
11200}.
LR53
6BS {
10203}; According to {
11778}
Lr53 originated from
Ae. longissima or
Ae. sharonensis ; 6[S] S.6[S] L-6BL {
117787}.
LR54
| Note | Derived from Ae. kotschyi . |
| Chromosome | 2DL |
| Varieties | Line S14 {10139}. |
| ad | Line 8078 {10139}. |
| al | Ae. kotschyi 617 {10139}. |
LR55
| Note | Derived from Elymus trachycaulis {10180}. 1B ( |
| Chromosome | 1BL |
| Chromosome | 1H |
| Varieties | KS04WGRC45 = Heyne*3/TA5586. |
LR56
6A (6AL-6S[sh] L.6S[sh] S) {
10224}.
LR57
| Note | Derived from Ae. geniculata . 5DS ( |
| Chromosome | 5DL |
LR58
| Note | Derived from Ae. triuncialis = T |
| Chromosome | 2BS |
2BL-2[t] L(0.95). 2BL {
10375}.
LR59
| Note | Derived from Ae. triuncialis . 1A, probably 1AS alien centric fusion {10399}. |
| Varieties | Line 0306 {10399} = Ae. peregrina -680/2*CS//5*W84-17 {10399}. |
| al | Ae. peregrina (UUSS, 2n=28) 680 {10399}. |
Problems in recovering balanced recombinants are reported in {
10762}. Further study of this translocation (Lr59-Full) identified a 1AS.1L[P] -6S[P] -6BS structure. Another round of recombination identified the following types: 1AS.1L[P] -1AL; 1AS.1L[P] -6S[P] -6BS; and 1AS.1AL-1L[P] -6S[P] - 6BS (Line Lr59-151 had the shortest alien segment). Recombinants with 6BS retained the wheat
GLI-B2 locus {
11499}.
LR60
| Synonym | LrW2 {0305} |
| Chromosome | 1DS |
| Varieties | RL6172 {0305} = Thatcher*3/V860. |
| Marker associations | Lr60 – 8.4 cM – Xbarc149-1D/Lr21 {10400}; Lr60 – 13 cM – Lr21 {10400}. |
LR61
| Synonym | LrAW2 {11223} |
| Chromosome | 6BS |
| Type varieties | AUS 26579 {11224}; AUS 26582 {11224}; Guayacan 2 {10485}; Guayacan INIA {10485}; PI 244061 {11280}. |
| Marker associations | Lr61 – 2.2 cM – P81/M70 269/P87/M75131 – 4.6 cM – P87/M76 149 – 21.7 cM – Xwmc487-6B {10485}; sun682 – 0.7 cM – Lr61/sun683/sun684 |
The designation LrAW2 was also used for Lr82 .
LR62
| Note | Derived from Ae. neglecta 6A = 6AL-6[Aen] L.6[Aen] S {10537}. |
| Varieties | Line 03M119-71A {10537}. |
| al | Ae. neglecta 155 {10537}. Associated with Yr42 {10537}. |
LR63
| Note | Derived from T. monococcum |
| Chromosome | 3AS |
| i | RL6137 = Thatcher*6/TMR5-J14-12-24 {10646, 10875}. |
| Varieties | TMR5-J14-12-24{10646}. |
| dv | T. monococcum {10646}. |
| Marker associations | Xbarc321/Xbarc573A – 2.9 cM – Lr63 {10875}. |
LR64
| Chromosome | 6AL |
| i | RL 6149 = Thatcher*6/ T. dicoccoides 8404 LrX {10550}. |
| Varieties | Tc/RL6149-RIL13, GSTR 451{11399, 11498}. |
| Type varieties | T. dicoccoides 8404 {10550}. |
| Marker associations | Xbarc104-6A – 13.9 cM – Lr64 – 21.9 cM – Xgwm427-6A {10550}; K-IWB38521 – 1.0 cM – Lr64/K-IWB59855 – 2.9 cM – K-IWB72197 – 10 |
LR65
| Synonym | LrAlt {10739} |
| Chromosome | 2AS |
| Varieties | Selection ARK 0; {10848}. |
| Varieties (alt.) | T. spelta Altgold Rotkorn Lr71 {10739, 10848}. |
| Marker associations | Lr65 – 1.8 cM – Xbarc212-2A/Xwmc382-2A – 2 cM – Xgwm636 {10739}; XE41M57-165 – 3 cM – Lr65 – 2 cM – Xbarc124/Xbarc222/Xgwm614-2A {10848}; LR65 |
LR66
| Note | LrS13 {10592}. |
| Chromosome | 3A |
3A = 3A-3S[S] .
LR67
| Note | Adult plant resistance. |
| Chromosome | 4DL |
| Chromosome bin | C-0.53 {10675}; Distal to 0.56 {10678}. |
| i | RL6077 = Thatcher*6/PI 250413 {10675}. |
| Varieties | Chapingo 48 {11070}; PI 250413 {10676}; Yaqui 53 {11070}. v2 NP876 Lr46 {11441}; Sujata Lr46 {11440, 11442}. |
| Marker associations | Xcfd71-4D – 1.5 cM – Lr67 {10675}; Pleiotrophic with Yr46 ; Close linkage with Xcfd71-4D and Xbarc98-4D estimated at 4.4 cM, and Xcfd23-4D |
| c | This multiple disease resistance locus was identified as a hexose transporter most similar to the STP13 family and containing 12 predicted transmembrane helices {11070}; |
LR68
| Note | Adult plant resistance. |
| Chromosome | 7BL |
| Varieties | Arula 1 CIMMYT GID 1847450 {10817}; Arula 2 CIMMYT GID 1847422 {10817}. |
| Varieties (alt.) | Arula 1 Lr14b CIMMYT GID 1847450 {10817}; Arula 2 Lr14b CIMMYT GID 1847422 {10817}; Frontana Lr13 Lr14b Lr34 Lr46 {10817}; Parula _Lr3b |
| Marker associations | Close linkage with several markers in chromosome arm 7BL and Lr14b in the Apav x |
Arula population. Flanking markers are
Xpsy1-1 and
Xgwm146-7BL at 0.4 and 0.6 cM. Gammairradiation induced deletion stocks of Arula 1 that lack
LrP but have
Lr14b were identified showing that the two genes are located at different closely linked loci {
10817};
Xwmc232-2B – 0.2 cM
– Xcfa2257-2B – 1.1 cM
– Cs7BLNLRR
– 0.3 cM
– Psy1-1 – 0.5 cM
– Lr68 – 0.6 cM
– Xgwm146-2B {
10817}; Gamma-irradiation induced deletion stocks of Arula 1 lacked
Lr68 but had
Lr14b showing that the two genes are located at different closely linked loci {
10817}.
LR69
| Chromosome | 3DL |
| Varieties | Toropi-6.3 {10903}. |
LR70
| Chromosome | 5DS |
| Varieties | Yet to be named selection of cross or backcross to Tc {10904}. |
| Varieties (alt.) | KU3198 Lrk1 {10904}. |
| Marker associations | Lr70 – 5.6 cM – Xbarc130-5D – 1.7 cM – Xwmc233-5D {10904}. Lrk1 is possibly Lr52 {10904}. |
LR71
1B centromere region not resolved {
10911}.
LR72
| Chromosome | 7BS |
| Type varieties | Altar C84 GID 30374 {10947}; Atil C2000 GID 6719128. |
| tv2 | Storlom Lr3a {10947}; Llareta INIA Lr14a {10947}; Jupare Lr27 + Lr31 {10947}. |
| Marker associations | Lr72 – 5.5 cM – Xwmc606-7B {10947}. |
LR73
| Chromosome | 2BS |
| Varieties | Morocco {10969}; Several Australian cultivars {10969}. |
| Varieties (alt.) | Federation LR10 {10969}; |
| Marker associations | wPt8760 – 4 cM – Lr73 – 1.4 cM – wPt8235 {10969}. |
LR74
| Note | Adult plant resistance |
| Chromosome | 3BS |
| Chromosome bin | 3BS8-0.78-0.87. |
| Varieties | AGG91583WHEA=BTSchomburgk Selection {11031}; Spark {11031}. |
| Marker associations | Xcfb5006-3B – 1.9 cM – Lr74 – 2.2 cM – BS00009992 – 2.7 cM – Xgwm533-3B {11031}. |
Tc*3 / Caldwell population: a gene for adult plant resistance derived from Caldwell was identified with closest marker
Xcfb5006-3B ; the Tc*2 / Caldwell 24-1 parent shared the same T allele at KASP marker
IWB44132 as Spark and BT-Schomburgk Selection {
11281}.
LR75
| Note | Adult plant resistance. |
| Synonym | Qlr.sfr-1BS {10066} |
| Chromosome | 1BS |
| Chromosome bin | 1BS10-0.51.00. |
| Varieties | ArinaLr75, Arina*2//Forno/Arina#F7NIL85 {11053}; C14.20 {11053}. |
| Varieties (alt.) | Forno Lr14a Lr34 {11053}. |
| Marker associations | Xgwm604-1B 1.6 – cM – Lr75 – 2.70 cM – swm271 – 0.14 cM – Xgwm11-1B/Xgwm181B/swm294/swm278/swm275 {11053}. |
LR76
| Note | Derived from Ae. umbellulata . |
| Synonym | LrUmb {11055} |
| Chromosome | 5DS |
| Varieties | IL 393-4 {11055}; T. durum cv. WH890/ Ae. umbellulata Pau 3732 // CS Ph[I] /3/2*WL711, C14.21 {11055}. |
| al | Ae. umbellulata Pau 3732 {11055}. |
| Marker associations | Lr76 – 7.6 cM – Xgwm190-5D {11055}. Lr76 behaves as an allele of Lr57 derived from Ae. geniculata . The low infection types are also |
LR77
| Note | Adult plant resistance. |
| Chromosome | 3BL |
| Varieties | Tc*2 / Santa Fe 8-1C.9 {11164}; Tc*2 / Toropi GSTR 449 {11164} |
| Varieties (alt.) | Duster Lr3a Lr11 Lr34 PI 639233 {11164}; Santa Fe Lr3a Lr37 PI 641772 {11164}. |
| Marker associations | IWB2531 – 3.5 cM – IWB32805 – 3.5 cM – Lr77/IWB10344 – 0.9 cM – IWB73555 – 5.3 cM – IWB12260 {11164}. |
LR78
| Note | Adult plant resistance. |
| Synonym | QLr.cdl.5D {11212} |
| Chromosome | 5DS |
| Chromosome bin | According to {10125} Xbarc130 is in bin 5DS2-0.78-1.00 and Xcfd189 is in bin 5DS1-C-0.63. |
| Varieties | Tc *2 / Santa Fe GSTR 450 {11498}. Tc*3 / Toropi 4A212A {11212}. |
| Varieties (alt.) | Toropi PI 344200 {11212}. |
| Marker associations | Xcfd1895D – 13.2 cM – IWA2689 – 2.2 cM – Lr78 – 8.0 cM – Xcfa2104-5D {11212}. }. |
A second selection Tc*2 / 3A12A crossed with Tc segregated for multiple QTL in chromosome arms 1BL (possibly
LR46 ), 3BS and 4BS {
11212}.
LR79
| Synonym | LrAW3 {11224} |
| Chromosome | 3BL |
| Chromosome bin | 3BL-0.63-0.90. |
| Type varieties | 242/Bansi#149, C18.15 {11224}. |
| tv2 | AUS26582 Lr61 {11223, 11224}. |
| Marker associations | KASP31457 – 8.1 cM – sun770 – 2.9 cM – Lr79 – 1.8 cM – sun786_ {11224}. |
Lr79 conferred resistance to Australian common wheat
Pt races, but not to durum-specific Ethiopian and Californian races {
11224}.
LR80
| Synonym | LrH2 {11464} |
| Chromosome | 2DS |
| Varieties | Hango-2, FLW6-Selection AGG95499WHEA {11464}. |
| Marker associations | Xgdm35-2D – 7.5 cM – Xcau96-2D – 0.4 cM – Lr80 – 0.2 cM – Xbarc124-2D – 13.2 cM – Xgwm296-2D {11464}. Xcau96-2D – 4.0 |
LR81
| Note | Lr470121 {11583}. |
| Chromosome | 2AS |
| Chromosome bin | 2AS-0.78-1.00. |
| Varieties | RIL 92 PI 700925 {11583}. |
| Varieties (alt.) | PI 470121 Lr34 {11583}. |
| Marker associations | Xwmc827-2A – 9.4 cM – Xstars-KASP320 – 0.5 cM – LR81 – 0.2 cM – Xstars-KASP323 – 5.3 cM – Xwmc296-2A {11583}. |
LR82
| Note | LrAW2 {11586}. Recessive. |
| Chromosome | 2BL |
| Varieties | Aus27352 {11586}. |
| Marker associations | KASP22131 – 0.8 cM – Lr82 – 1.2 cM – KASP11333 {11586}. The designation LrAW2 was also used for Lr61 . |
LR83
| Note | LrX {11399}. Recessive. |
| Chromosome | 1DS |
| Varieties | PI 701502 {11638}. |
| Varieties (alt.) | RL6149 Lr60 {11399; 11638}. |
| Marker associations | K-IWB38437 – 1 cM – LR83 – 8.6 cM – 1D9037237 – 4.7 cM – K-IWB577 {11638}. LR83/IWB38437 – 11.2 cM – K-IWB577_ {11399}. Locus |
LR84 . TRITD6Bv1G225630 (Svevo).
| Note | QLr.cim-6BL ) {11600}; QLr.hzau-6BL {11640}; TtRPM1-630 {11640}. Adult plant resistance. |
| Chromosome | 6BL |
| Type varieties | Atred#2+6BL {11640}; Atred#2 / Bairds RIL 397 GID 7013103 {11600, 11640}. |
| tv2 | Bairds {M11600, 11640}; Dunkler {11639, 11640}; Heller#1 {11639, 11640}; Planeta {11640}. |
| Marker associations | IWB8763 – LRXX – IWB10767 (0.9 cM. 131.6 Kb) {11640}. |
| c | NBL-LRR structure annotated as an RPM1 -like gene {11640}. |
LR85
| Note | 6B (6B-6S[sh] ) {11683, 11684, 11712}. |
| Varieties | Line 6B-RY-32-3-14 {11683} = Line 42 {11684} = D42 {11712} = Genebank accession number to be advised . |
| al | Ae. longissima AEG-67822 {11712}; Ae. sharonensis AEG-548-4 {11683; 11712}. |
| c | The same NLR gene with a distinctive coiled-coil (CC) domain was cloned from each alien diploid accession {11712}. Development of lines with shortened 6S[sh] segments |
| Note | Adult plant resistance. |
| Chromosome | 5DS |
| Varieties | Ae. caudata derivative PAU16060 {11613}. |
| al | Ae. caudata PAU3556 {11613}. |
| Chromosome | 7BL |
| Chromosome bin | 7BL-10. |
| Varieties | Bimai 16 {11042}. |
| Marker associations | Zcfa2257-7B – 2.8 cM – LrBi16 – 2.6 cM – Xgwm344-7B {11042}; Xcfa2257-7B – 2.8 cM – LrBi16 – 2.5 cM – Xgwm344-7B {11082}; |
| Chromosome | 7BL |
| Chromosome bin | 7BL-10. |
| Varieties | Fundulea 90 {11038}. |
| Marker associations | Xgwm344-7B – 4.4 cM – LrFun – 5.7 cM – Xwmc70-7B {11038}. |
| Chromosome | 2BL |
| Varieties (alt.) | Sinvalocho MA Lr3 LrSV1 LrSV2 {10929}. |
| Marker associations | Xbarc-2B – 0.6 cM – Xgwm382-2B – 0.6 cM – LrGam6 – 17.9 cM – Xgwm528-2B {10929}. |
| Chromosome | 5BS |
| Varieties (alt.) | Ku3198 Lr70 {10904}. |
| Marker associations | LrK1 – 0.6 cM – Xcfd20/Xgwm234-5B {10904}. LrK1 could be Lr52 or an allele {10904}. |
| Varieties | Thatcher {10233}. |
| Varieties (alt.) | Kanred LrKr2 {10233}. |
| Varieties (alt.) | Kanred LrKr1 {10233}. |
| Varieties | Marquis {10233}. |
| Chromosome | 2BL |
| Varieties | Neijiang 977671 {11043}. |
| Marker associations | Xwmc317-2B – 4.2 cM – LrNJ97 – 2.2 cM – Xbarc159-2B – 2.3 cM – Xwmc356-2B {11043}. |
| Chromosome | 5DS |
| Varieties | Ae. peregrina derivative PAU16058 {11614}. |
| al | Ae. peregrina PAU3519 {11614}. |
| Chromosome | 2BS |
| Type varieties | PI 244061 {11280}. ma : LrPI144061 – 11.5 cM – KASP2BSIWB6117 {11280}. This gene might be Lr13 {11280}. |
| Chromosome | 6BL |
| Type varieties | PI 287263 {11280}. ma : LrPI287263 – 2.8 cM – KASP6BLIWB44753 – 2.8 cM – Xdupw217 {11280}. |
| Chromosome | 6BS |
| Type varieties | PI 209274 {11280}. |
| Marker associations | KASP6BSIWB39456 – 3.7 cM – LrPI209274 – 1.0 cM – KASP6BSIWB6117 – 8.1 cM – Xdupw217-2B {11280}. This gene may be Lr53 {11280}. |
| Note | Adult plant resistance. |
| Chromosome | 2DS |
| Varieties (alt.) | Sinvalocho MA Lr3 LrGam6 LrSV2 {10929}. |
| Marker associations | Xgwm296-2D – 1.4 cM – LrSV1 – 7.1 cM – Xgwm261-2D {10929}. |
| Note | Adult plant resistance. |
| Chromosome | 3BS |
| Varieties (alt.) | Sinvalocho MA Lr3 LrGam6 LrSV1 {10929}. |
| Marker associations | Xgwm389-3B – 3.0 cM – LrSV2/Xgwm533-3B – 4.2 cM – Xgwm49-3B {10929}. |
According to {
11334}
LrSV2 acted in a complementary way with
Lrc- SV2 on chromosome 4BL. These complementary genes were closely linked to the locations of
Lr27 and
Lr31 but were considered to be different genes.
| Note | Adult plant resistance {820}. |
| Varieties (alt.) | AC Taber Lr13 Lr14a {820}. |
| dv | T. monococcum . |
| Marker associations | Linked to microsatellite locus Xgwm136 {277}. |
| Varieties | Ae. triuncialis derivatives {227}. |
| ad | WL711 BC2F5 addition lines {227}. |
| al | Ae. triuncalis Acc. 3549 {227}. |
| Marker associations | Lines with LtTr possessed a homologue of Xgwm368-4B {227}. |
| Note | Reccessive {10031}. |
| Synonym | lrTt1 {10031} |
| Chromosome | 2A |
| Varieties | Line 842 = Saratovskaya*2/ T. timopheevii spp. viticulosum {10031}. |
| Marker associations | Xgwm812-2A – 1.5 cM – LrTt1 {10031}. |
A gene, identified only as
Lr , was transferred to wheat chromosome 2AS from 6M[v] {
113}: cosegregating markers were
Xpsr933-2A and
Xpsr150-2A . GERMPLASM
| Chromosome | 5B |
| Type varieties | Wollaroi AUS99174 {10747}. |
| Marker associations | Xgwm234-5B – 7.2 cM – LrWo – 20.3 cM – wPT-1420 {10747}. |
The relationship of LrWo to Lr52 was not established.
| Chromosome | 1BL |
| Varieties | Guizhou 98-18 {11042}; Tian 95HF2; Xinong 1183-4 {11042}; Zhoumai 11 {10682}. |
| Varieties (alt.) | Predgornaia 2 Lr26 {10581}; Zhou 8425B Lr26 {10581}. |
| Marker associations | Xbarc8-1B (cent) – 5.2 cM – LrZh84 – 3.9 cM – Xgwm582-1B {10581}. |
| Synonym | 6Ai#2 {11079} |
| Varieties | Tulaikoskaya 5 {11079}; Tulaikoskaya 10 {11079}; Tulaikoskaya 100 {11079}. |
A series of temporary designations for seedling and adult plant resistance genes in six durums is given in {
1648}.
A potentially novel resistance gene was located in chromosome 5BS of Iranian landrace PI 289824.
Xgwm234-5B – 8.9 cM
– Lr – 2.3 cM
– STS
Xtxw 200 {
10253}.
Complex genotypes AC Domain:
Lr10 Lr16 Lr34 {
820}. AC Splendor:
Lr1 Lr16 Lr34 {
10179} AC Teal:
Lr1 Lr13 Lr16 {
821} Alsen:
Lr2a Lr19 Lr13 Lr23 Lr34 {
10152} Alsen:
Lr2a Lr10 Lr13 Lr23 Lr34 {
10223}. Benito:
Lr1 Lr2a Lr12 Lr13 {
1256}. Buck Manantial:
Lr3 Lr13 Lr16 Lr17 Lr34? {
300}. Carberry:
Lr21 Lr16 Lr23 Lr34 Lr46 {
11567}. Coker 9663:
Lr9 Lr10 Lr14a {
10742}. Duster:
Lr34 Lr46 Lr77 {
11369}.
Estanzuela Benteveo:
Lr13 Lr26 Lr34 {
10980}. Estanzuela Pelon:
Lr1 Lr17a Lr26 Lr34 {
10980}. Estanzuela Tarariras:
Lr3bg Lr13 Lr34 {
10980}. Era:
Lr10 Lr13 Lr34 {
342}. Grandin:
Lr2a Lr3 Lr10 Lr13 Lr34 {
821}. INIA Boyero:
Lr13 Lr26 Lr34 {
10980}. INIA Churrinche:
Lr10 Lr24 {
10980}. INIA Tero:
Lr17a Lr24 {
10980}. Mango:
Lr1 Lr13 Lr26 Lr34 {
1374}. MN7529:
Lr1 Lr2a Lr10 Lr16 {
976}. Norm:
Lr1 Lr10 Lr13 Lr16 Lr23 Lr34 {10152, 10223} Opata 85:
Lr10 Lr27+Lr31 Lr34 {
1058}. Pasqua:
Lr11 Lr13 Lr14b Lr30 Lr34 {
304}. Pioneer 26R61:
Lr13 Lr14b Lr26 {
10742}. Prospect:
Lr1 Lr2a Lr10 Lr13 {
197}. Roblin:
Lr1 Lr10 Lr13 Lr34 {
303}, {
713}. Trap:
Lr1 Lr3 Lr10 Lr13 Lr34 {
1374}. Genotype lists: Australian cultivars {
0288}; Chinese cultivars {0013, 10682, 11310}; Combinations with
Lr34 {
1361}; Cultivars from the former USSR {
1380}; Czechoslovakian/Czech cultivars{
855}, {
0102}, {
11717}; European cultivars {0229, 0260, 0288, 0337,10345, 10794}; Indian cultivars {1365, 1345}; Indian Subcontinent {
1365}; Mexican cultivars {
1373}; U.S.A. cultivars {
1219}, {
978}, {
0334}, {
10111}, {
10146}, {
10152}, French cultivars {
10792}, Croatian cultivars {
11135}. Kazakhstan cultivars {
11161}, see also {
970}. See {
11178} for review and analysis of leaf rust resistance genes in six durum wheats.
SULR23
| Note | Suppressing allele. |
| Chromosome | 2DS |
| Varieties | Altar 84/ Ae. tauschii 219 {1058}. |
| Note | Non-suppressing allele. |
| Varieties | Opata 85 {1058}. See also evidence for specific suppression in {948}. |
| Chromosome | 1BL |
| Chromosome bin | 1BL6-0.32 {10743}. |
| Marker associations | Proximal to Xgwm264.1-1BL {10743}. Associated with lm producing a lesion mimic phenotype in the absence of disease {10743}. |
| Chromosome | 1BS |
| Varieties | Forno/ T. spelta cv. Oberkulmer mapping population; the resistance was contributed by Forno {0050}. |
| Marker associations | Associated with Xpsr949-1B and Xgwm18-1B {0050}. |
| Chromosome | 2B |
| Varieties | Forno/ T. spelta cv. Oberkulmer mapping population; the resistance was contributed by Oberkulmer {0050}. |
| Marker associations | Associated with Xpsr924-2B and Xglk699-2B {0050}. |
| Chromosome | 3A |
| Varieties | Forno/ T. spelta cv. Oberkulmer mapping population; the resistance was contributed by Forno{0050}. |
| Marker associations | Associated with Xpsr570-3A and Xpsr543-3A {0050}. |
| Chromosome | 4B |
| Varieties | Forno/ T. spelta cv. Oberkulmer mapping population; the resistance was contributed by Forno {0050}. |
| Marker associations | Associated with Xpsr921-4B and Xpsr593-4B {0050}. |
| Chromosome | 4DL |
| Varieties | Forno/ T. spelta cv. Oberkulmer mapping population; the resistance was contributed by Forno {0050}. |
| Marker associations | Associated with Xglk302-4D and Xpsr1101-4D {0050}. |
| Chromosome | 5DL |
| Varieties | Forno/ T. spelta cv. Oberkulmer mapping population; the resistance was contributed by Oberkulmer {0050}. |
| Marker associations | Associated with Xpsr906-5D and Xpsr580-5D {0050}. |
| Chromosome | 7B |
| Varieties | Forno/ T. spelta cv. Oberkulmer mapping population; the resistance was contributed by Forno {0050}. |
| Marker associations | Associated with Xpsr593-7B and Xpsr129-7B {0050}. |
| Varieties | Forno/ T. spelta cv. Oberkulmer mapping population; the resistance was contributed by Forno {0050}. |
| Marker associations | Associated with Xglk750-7B and Xmwg710-7B {0050}. |
AGS 2038 (R) / UG111729 (MR) : RIL population. Seedling and adult plant resistance was controlled by several QTL, the most important of which was designated
QLr.ags-1AL spanned by
IWB20487 and
IWA4022 {
11507}.
Avocet S / Attila: At least two additive genes for slow rusting {
10586}. In addition to
Lr46 there were small effects on chromosomes 2BS, 2BL and 7BL {
10586}.
Avocet R (S) / Chilero: Lr46/Yr29 and
QLr.cim-5DS/QYr.cim-5DS , from Chilero, and
QLR.cim1DL/QYr.cim-1DL from Avocet R {
11306}.
Avocet / Kundan: RIL population:
Lr29 (flanked by
10902272 and
02414 , R[2] = 0.5 -0.65),
QLR.cim2BL flanked by
1237388 and
108178035C>T
from Avocet and QLr.cim-2DS
flanked by 1237388
and 1081780
35C>T from Kundan {
11248}.
Avocet / Pastor: RIL population: QTLs mapped on 1BL (
Lr46 , 2BS, 5A, 6B and 7BL plus minor QTLs on 1B, 2A and 2D {
10928}.
Avocet S / Pavon 76: QTL identified included: 1BL (
PstAFAMseCAC1&2 ), 4BL (
Xgwm368 ), 6AL (
Xgwm617 ), 6BL (
PstAGGMseCGA1 ) {
10443}.
Beaver / Soissons : DH population: QTL for resistance to Australian pathotypes were located on 4-6 chromosomes over 3 years; the most consistent being 1B(1BL.1RS), 4BS (proximal to
Xbarc20-4B ) and 5AS (
QTLBvr5AS , proximal to
Xbarc10-5A ) and in the vicinity of
wPt-8756 and
wPt-1931 {
10687}.
Capo (R) / Arina (S) and Capo (R) / Furore (S): Four QTL on chr. 2AL, 2BL, 2BS and 3BS, were from Capo and one on 5BLwas from Arina; the QTL on 2AL, 2BL and 3BS were co-located with QTL for resistance to stripe rust {
11449}.
CI 13227 (R) / Lakin (MS): DH population: Adult plant resistance conferred by
QLR.hwwg-2DS (R[2] = 0.11 – 0.26),
QLr,hwwg-7BL (R[2] = 0.08-0.19, likely
Lr68 ), and
QLr.hwwg-7AL from CI 13227, and
QLr.hwwg-3BS from Lakin {
11311}.
CI 13227 (R) / Suwon (S): SSD population {
10211}. Two QTLs for slow leaf rusting, located on chromosomes 2B and 7BL, were mapped for final severity, area under disease progress curve, and infection rate in a
QLr.osu-2B was associated with microsatellite markers
Xbarc18-2B and
Xbarc167-2B (R[2] = 9-18%).
QLr.osu-7BL was associated with microsatellite marker
Xbarc182-7B (R[2] = 12-15%) {
10211}. CI 13227 constributed the resistant alleles for both QTLs.
QLrid.ocu-2D , linked to
Xgwm2612D , affected the duration of infection {
10211}. However, Thatcher backcross derivatives of CI 13227 appeared to have
Lr3c and
Lr46 {
11021}.
Libellula / Huixianhong: RIL population: Six QTL on chromosome arms 1AS, 1AL, 1BL (
Lr34 ), 3AL, 4BL and 7DL were detected in a least two of seven environments, the most effective of which was identified as
Lr34 {
11757}.
Mianyang351-15 (R) / Zhengzhou 5389 (R): RIL population: four QTL were located on chromosome arms 1BL (
Lr46 ), 2AS (
Yr37 ), 2DS, and 7BL (
Lr68 ) {
11545}.
Ning7840 / Clark : RIL population:
QLr.hwwg-5AS from Ning 7840;
QLr.hwwg-6AS from Clark, flanked by
barc23-6A and
IWA3321 ;
Qlr.hwwg3BS.1 from Clark, flanked by
IWA4654 and
IWA1702 ; possibly
Lr74 ; and
QLr.hwwg-7DS/Lr34 from Ning 7840 {
11278}.
TA 4152-60 (MR) / ND495 (MR): DH population: Five QTLs for APR were identified in the field, viz.
QLr.fcu-3AL (R[2] = 0.18),
QLr.fcu-3BL (R[2] = 0.19),
QLr.fcu-5BL (R = 0.07), and
QLr.fcu-6BL (R[2] = 0.12) from TA 4152-60 and
QLr.fcu-4DL (R[2] = 0.13) from ND495 {
10757}. The 3AL gene also conferred seedling resistance to some races and the 3BL gene conferred resistance to race MFPS {
10757}.
Thatcher*3 / Americano 44d: RIL population: QTL for adult plant resistance identified on chromosomes 3AS (
QLr.cdl-3A ), 3DS (
QLr.cdl-3DS ) and 6DS (
QLr.cdl-6D ); both the 3AS and 3DS QTLs were required for expression of resistance {
11296}.
26R61 (S) / AGS 2000 (R): RIL population. A single QTL (
QLr.uga-2BS ) flanked by
wPt-666389 and
wPt-2600 on chromosome arm 2BS was designated
LrA2K {
11507}.
LrA2K – 2.9 cM –
Xwmc770-2B {
11507}.
Review of QTL in hexaploid wheat {
11442}.
Tetraploid wheat:
Atred#1 / Dunkler: RIL population: Four QTL for APR, including
Lr46 ,
QLr.cim-5BL and
QLR.cim6BL from Dunkler and
QLr.cim-2Bc from Atred#1 {
11639}.
Atred#1 / Heller#1: RIL population: Four QTL for APR, including
Lr46 ,
QLr.cim-5BL and
QLR.cim6BL from Dunkler and
QLr.cim-2Bc from Atred#1 {
11639}.
Bairds (R) / Atred#1: RIL population: Four QTL for APR, including
Lr46 ,
QLr.cim-5BL and
QLR.cim6BL from Bairds and
QLr.cim-2Bc from Atred#1 {
11600}.
Colosseo / Lloyd: A major QTL,
QLr.ubo-7B.2 , for seedling and adult plant resistance from Colosseo, was located between
Xgwm344.2-7B and DART 378059,
3.23. Reaction to Pyrenophora tritici-repentis (anomorph: Drechlera tritici -repentis)⌂ Home
Disease: Tan spot, yellow leaf spot. Virulence in the pathogen is mediated by host-specific toxins and host resistance is characterized at least in part by insensitivity to those toxins. Three toxins, Ptr ToxA, Ptr ToxB and Ptr ToxC have been identified (see {10153}). Toxin sensitivity determined by use of toxins extracted from pathogen strains and resistance determined by infection experiments are treated as different traits, although common genes may be involved. A review is provided in {10690}. Introgressions of genes for insensitivity to Ptr ToxA and Ptr ToxB are outlined in {10153}.
Batavia (S) / Ernie (R): DH population tested over three years. Four (1A(Ernie), 7A, 2BS, 3BS (Batavia)), five (2BS, 5BL(E), 3D, 6A, 7D(B)) and four (2BS, 5BL(E), 1A, 6A(B),) QTL accounted for most of the variation in each year. The greatest effect across years was the QTL on chromosome 2BS (R[2] =0.382, 0.298 and 0.362, respectively). This QTL was validated in four additional populations {10782}.
Grandin (S) / BR34 (R) : RIL population: QTL in 1BS, QTs.fcu-1BS , (13-29% of variation depending on race) and 3BL, (13-41%) were involved in resistance to 4 races. Five other QTL showed race specific responses {10248}.
TA4152-60 (R) / ND495 (S): DH population: Five QTLs for resistance, all from TA4152-60 {10580}, viz., QTs.fcu-2AS and QTs.fcu-5BL.1 conferring resistance to all races used, QTs.fcu-5AL conferring resistance to races 1, 2 and 5, QTs.fcu-5B.2 conferring resistance to races 1 and 2, and QTs.fcu-4AL conferring resistance to race 3.
WH542 (R) / HD29 (S): RIL population: SIM indicated QTL on chromosomes 1B, 3AS, 3BL, 5B and 6BS, but only two were confirmed by CIM, Qts.ksu-3AS flanked by Xbarc45-3A and Xbarc86-3A (LOD 5,4, R[2] = 0.23) and Qts.ksu-5BL (probably Tsn1 ) flanked by Xgwm499-5B and Xest.stsbe968-5B (LOD 6,5, R[2] = 0.27) {10552}.
Wangshuibai / Ning 7840: RIL population: Race 1: QTs.ksu-1AS , R[2] =0.39 (nearest marker Xcfa2153-1A and QTs.ksu-2BS , R[2] =0.04) (nearest marker Xbarc2-2B {10753}.
TSN1
| Note | Sensitive to Ptr ToxA. |
| Varieties | Bobwhite {10458}; Cheyenne {10458, 0007}; Glenlea {10458}; Grandin {10458}; Hope {10458, 0007}; Jagger {0007}; Katepwa {10458}; ND2709 {10458}; |
| Varieties (alt.) | Kulm Tsc1 {10458}, {10030}, {346}; Trenton Tsc1 {0315}. |
| dv | Two Ae. speltoides accessions {10756}. |
| Type varieties | Langdon {10458}; Some T. dicoccoides accessions {10756}. |
| Marker associations | Xbcd183-5B – 1.2 cM – Tsn1/Xbcd1030-5B – 2.4 cM – Xrz575-5B {10688}. |
| c | Tsn1 has 8 exons and a S/TPK-NBS-LRR structure; all three domains are required for function and TSN1 protein does not interact directly with ToxA {10756}. |
In Kulm/Erik, toxin response accounted for 24% of the variation in disease response, which was affected
by 4-5 genes {
10030}.
Ptr ToxA is functionally identical to
S. nodorum ToxA but has two predicted amino acid differences {
10459}. See Reaction to
Phaeosphaeria nodorum .
Australian cultivars with
tsn1 and
Tsn1 are listed in {
10540}.
TSN2
| Note | Conditions resistance to race 3 {10344} |
| Chromosome | 3BL |
| sutv | LDN(DIC-3B) {10344}. |
| Type varieties | T. turgidum no. 283, PI 352519 {10344}; T. dicoccoides Israel-A {10344}. |
| Marker associations | Identified as a QTL in region Xgwm285-3B – Xwmc366.2-3B (R[2] =91%) {10344}; Also classified as a single gene: Xgwm2853B – 2.1 cM _– tsn2 |
TSC1
| Note | Sensitivity to Ptr ToxC {344}. |
| Chromosome | 1AS |
| Varieties | 6B365 {0315}; Louise {11751}; LMPG-6 {11751}; Opata 85 {344}. |
| Varieties (alt.) | Kulm Tsn1 {0315}; Trenton Tsn1 {0315}. |
| Marker associations | Gli-A1 – 5.7 cM – Tsc1 – 11.7 cM – XksuD14-1A {0315}; Mapped to a 2.4 cM region spanning184 kb (CS RefSeq 2.1) in the |
According to {
10376} the same allele, presumably
tsc1 , conferred resistance to chlorosis induced by races 1 and 3 in cultivars Erik, Hadden, Red Chief, Glenlea and 86ISMN2137 in crosses with 6B-365.
| Note | Insensitivity is recessive. QTsc.ndsu-1A {9924}. |
| Varieties | Chinese Spring {11751}; Katepwa {315}; Opata 85 {344}; Penawawa {11751}; PI 62673 {11751}; Synthetic W-7984 {315}. |
TSC2
| Note | Sensitive to Ptr ToxB {10015}. |
| Chromosome | 2BS |
| Chromosome bin | 2BS3-0.84-1.00. |
| Varieties | Aronde {11750}; Katepwa {10871}; Maris Dove {11750}; Synthetic W-7984 {10015}; Thatcher {11750}. |
| Type varieties | Altar 84 {11750}. |
| Note | Insensitivity allele {10015} |
| Varieties | Chinese Spring {11750}; Lynx {11750}. Opata 85; Salamouni {10871}. |
| Type varieties | Altar 84 {10871; Langdon {11750}. |
| Marker associations | Xmag681-2B/XTC339813 – 2.7 cM – Tsc/XBE444541 – 0.6 cM – XBE517745 {10871}; An XBE444541 EST-STS co-segregating marker for Tsc2 was developed and lines with |
| Note | Resistance is likely recessive {344} |
| Synonym | Tsc1 {344} |
| Chromosome | 1AS |
| Varieties | Synthetic W7984 {344}. |
| Marker associations | Association with Gli-A1 {0264}, {0040}, {344}. QTsc.ndsu-1A , or a closely associated gene, confers insensitivity to Ptr ToxC, see {0315}. Inoculation with purified toxin Ptr |
| Chromosome | 4AL |
| Varieties | Opata 85/Synthetic W-7984 (ITMI) RI mapping population; resistance was contributed by W-7984 {0090}; In W-7976/Trenton resistance was contributed by W-7976 {0264}. |
| Marker associations | Association with Xksu916(Oxo2)-4A and Xksu915(14-3-3a)-4A {0090}; In W-7976/Trenton there was association with Xwg622-4A {0264}; Minor QTLs in chromosomes 1AL, 7DS, 5AL and 3BL |
QTL
'ITMI population': In addition to
tsc2 which accounted for 69% of the phenotypic variation in response to race 5, a QTL in chromosome 4AL (
Xksu916(Oxo)-4AS , W-7948) accounted for 20% of the phenotypic variation {
10015}.
Salamouni / Katepwa: RIL population: variation at the
Tsc2 locus explained 54% of the variation in response to race DW5 {
10871}.
QTL analyses of durum crosses infected with various isolates of race 4 (lacking in Ptr Tox 1, 2 and 3) detected QTL on chromosomes 1A (2 QTL), 4B (3 QTL) and 5A (1 QTL) {
11649}.
| Synonym | tsn1 See: Insensitivity to tanspot toxin |
Resistance is recessive. 5BL.
TSR2
| Note | Resistance is recessive. Confers resistance to race 3 {10344}. |
| Synonym | tsn2 {10344} |
| Chromosome | 3BL |
| sutv | LDN (DIC-3B) {10344}. |
| Type varieties | T. dicoccoides Israel-A {10344}. |
| tv2 | T. turgidum no. 283, PI 352519 Tsr5 {10344}. |
| Marker associations | Identified as a QTL in region Xgwm285-3B – Xwmc366.2-3B (R[2] = 91%) {10344}; also classified as a single gene: Xgwm285-3B – 2.1 cM _– tsr2 |
TSR3
| Synonym | tsn3 {10394} |
| Chromosome | 3D |
| Chromosome | 3DS |
| Varieties | XX41 = [Langdon/ Ae. tauschii CI 00017] {10394}; XX45 {10394}; XX110 {10394}. |
| dv | Ae. tauschii CI 00017 {10394}. |
| Marker associations | Xgwm2a – tsn3 , 15.3 cM, 14.4 cM and 9.5 cM in CS/XX41, CS/XX45 and CS/XX110, respectively {10419}. Resistances in XX41 and XX110 were recessive |
TSR4
| Note | Resistance is recessive. Resistance to race 1 (culture ASC1a) {10350}. |
| Synonym | tsn4 {10350} |
| Chromosome | 3A |
| Varieties | Salamouni {10350}. |
TSR5
| Synonym | tsn {10509} |
| Chromosome | 3BL |
| tv2 | T. turgidum no. 283, PI 352519 Tsr2 {10509}. |
| Marker associations | Tsr5 – 8.3 cM – Xgwm285-3B – 2.7 cM – Tsr2 {10509}. |
TSR6
| Note | Resistance is recessive. |
| Chromosome | 2BS |
| Varieties | ND-735 {10668}. |
| Marker associations | Xwmc382-2B – 15.3 cM – wPt-0289 – 4.6 cM – Tsr6 – 18.7 cM – Xwmc-2B {10668}. According to {10668} Tsr6 should be identical to |
TSR7
| Note | Dominant. QTs.zhl-3B {11362}. |
| Chromosome | 3BL |
| Varieties | Br34 {11363}; Penawawa {11363}. |
| sutv | Linked STARP markers were developed {11363}. |
| Marker associations | Linked STARP markers were developed {11363}. |
Tsr7 conferred resistance to race 1 (isolate Pti2), race 2 (isolate 86-124), race 3 (isolate 331-9), and race 5 (isolate DW5) {
11362}.
Temporary designations
| Note | Recessive |
| Chromosome | 3A |
| Varieties | Arina {10765}; Heines VII {10765}; Zenith {10765}. |
| Chromosome | 3B |
| Varieties | Dashen {10590}; HAR 604 {10590}; HAR 2562 {10590}. Effective against races ASC1a (race 1) and DW-16 {10590}. |
QTL
Louise / Penawawa: RIL population:
QTs.zhl-1A , located at interval 0-6.0 cM and likely
Tsc1 ;
QTs.zhl2D , located at 144.0-152.0 cM;
QTs.zhl-3B , located at 72.0-78.0; and
QTs.zhl-5A located at 154-160 cM {
11362}.
A QTL analysis of 4 durum crosses identified 12 QTL on chromosomes 1B, 2B (2), 3A (3), 5A (5) and 7A {
11481}.
3.24. Reaction to Rhizoctonia spp.⌂ Home
Cause of Rhizoctonia root rot.
ROT1
| Varieties | Scarlet-Rz1 {10761}. Scarlet-Rz1 was produced by mutagenesis {10761}. |
3.25. Reaction to Sitobion avenae⌂ Home
English grain aphid.
SA1
| Synonym | RA-1 {10877} |
| Chromosome | 6AL |
| Type varieties | C273 {10877}. |
| Marker associations | Xwmc179-6A – 3.37 cM – Sa1 – 4.73 cM – Xwmc580-6A {10877}. |
3.26. Reaction to Sitodiplosis mosellana (Gehin)⌂ Home
Insect pest: Orange blossum wheat midge, Wheat midge. This pest should not be confused with Contarinia tritici , the yellow blossom wheat midge.
SM1
| Chromosome | 2B |
| Varieties | Augusta {218, 11137}; Blueboy {218}; Caldwell {218}; CDC Landmark {11579}; Clark {218}; FL302 {218}; Glencross {11044}; Goodeye {11044}; |
| Marker associations | Linked to a SCAR marker{223}; Sm1 was mapped to a 2.5 cM interval on chromosome 2BS flanked proximally by AFLP-derived SCAR marker WM1 and distally |
| c | Gene candidate with NB-ARC-LRR-kinase-MSP structure {11579}. |
QTL
Henong 215 (R) / Yanyou (S) and
6218 (S) / Jimai 24 (R): selected RIL populations: Several QTL identified:
QSm.hbau-4A.2 with LOD scores 5.58 – 29.22 and PVE 24.4 – 44.8% were mapped to a 4.9 Mb interval; nearest markers
AX-109543456, AX-108942696 and
AX-110928325 {
11425}.
Reeder I/Conan: RIL population:
QSm.mst-1A , flanked by
Xwmc59-1A and
Xbarc1022-1A was the most effective and constant QTL for reduced larval infection over two years (R[2] =0.17 and 0.34) {
10841}. RILs with this QTL in three genetic backgrounds had reduced infestations of 42% {
10841}.
3.27. Reaction to Schizaphis graminum Rond. ( Toxoptera graminum Rond.)⌂ Home
Insect pest: Greenbug
GB1
| Note | Recessive. |
| Synonym | gb1 {222} |
| Chromosome | 1AS |
CI 9058 {
222}; Dickinson Selection 28A {
222}. Located in the region 13.3 – 14.2 Mb {
11731}.
GB2
| Note | Derived from Secale cereale . 1A {554} = T |
| Chromosome | 1AL |
GB3
| Note | Resistance in Largo and derivatives was controlled by multiallelic complementary genes {783}. Gb3 was postulated to be one of the loci concerned. |
| Chromosome | 7D |
| Chromosome | 7DL |
| Chromosome bin | 7DL3 0.82-1.00. |
| Varieties | Largo CI 17895 {622}; TAM110 {0319}; TAM112 {194, 10764}; TXGBE373 {0319}. |
| al | Insave rye. |
| Type varieties | Ae. tauschii PI268210 {10907}. |
| Marker associations | Completely associated with 2AFLP markers {0319}. These were also present in germplasm line KS89WGRC4, implying the likely presence of Gb3 or a closely linked resistance |
GB4
| Chromosome | 7DL |
| Varieties | CI 17959 {903}. Gb4 is either closely linked or allelic to Gb3 {10267}. |
GB6
| Note | Derived from Secale cereale . 1A = T |
| Chromosome | 1AL |
GB7
| Chromosome | 7DL |
| Varieties | Synthetic W7984 {10169}. |
| Type varieties | Ae. tauschii TA1651 {10169}. |
| Marker associations | Xwg420-7D – 2.1 cM – Gb7 – 13.4 cM – Xwmc671-7D {10169}. KASP markers developed {M23026}; KASP markers developed {11633}. |
GB8
| Synonym | Gb595379-1 {11378}. |
| Chromosome | 7DL |
| Chromosome bin | 7DL3-0.82-1.00. |
| Varieties | PI 595379-1 {11378}. |
| Marker associations | Xbarc11-7D – 10.41 cM – Gb8/Xstars508 (596.4 Mb) – 7.4 cM – Xwmc824-7D – 4.8 cM – Xgwm428-7D {11378}. Gb3 – Gb8 15+-1.35 cM {11378}. |
GB9
| Note | Gb76364 {11726}. |
| Chromosome | 7DL |
| Varieties | PI 703387, CWI 76364 {11726}. |
| dv | Ae. tauschii Wx1027 (CIMMYT) {11726}. |
| Marker associations | Mapped to a 0.6 Mb interval - Stars-KASP872 (599.8 Mb; CS RefSeq 2.1) 0.6 cM – Gb9 – 0.5 cM and Stars-KASP881 (600.5 Mb) {11726}. |
Temporary designations
| Chromosome | 7DL |
| Varieties | TA4152L94 = CETA/ Ae. tauschii Wx1027 {10267}. |
| Marker associations | Xwmc6717D – 34.3 cM – Gba – 20.7 cM – Xbarc53-7D {10267}. |
| Chromosome | 7DL |
| Varieties | TA452L24 = CROC 1/ Ae. tauschii Wx224 {10267}. |
| Marker associations | Xwmc6717D – 5.4 cM – Gbb – 20.2 cM – Xbarc53-7D {10267}. |
| Chromosome | 7DL |
| Varieties | TA4063.1 = 68111/Rugby//Ward// Ae. tauschii TA2477 {10289}. |
| Marker associations | Xgwm671-7D – 13.7 cM – Gbc – 17.9 cM – Xgdm150-7D {10267}. |
| Varieties | TA4064.1 = Altar 84/ Ae. tauschii TA2841 {10267}. |
| Marker associations | Xgwm671-7D – 7.9 cM – Gbd – 1.9 cM – Xwmc157-7D {10267}. |
| Synonym | Gbx {10267} |
| Chromosome | 7DL |
| Varieties | KS89WGRC4 = Wichita/TA1695//2*Wichita {10267}. |
| dv | Ae. Tauschii TA1695 {10267}. |
| Marker associations | Xwmc157-7D – 2.7 cM – Xgdm150-7D {10267}. |
| Synonym | Gbx {10267} |
| Varieties | W7984 {10267}. |
| Marker associations | Gbx2 was located 8.8 cM from Gb3 {10267}. |
| Chromosome | 7A |
| Varieties | Sando’s Selection 4040 {10192}. |
| Marker associations | Xpsr119-7A/Xbcd98-7A – 5.8 cM – Gby – 3.8 cM – Xpr1B-7° {10192}. |
| Chromosome | 7DL |
| Varieties | KSU97-85-3 {10171}. |
| Type varieties | Ae. tauschii TA1675 {10171}. |
| Marker associations | Xgdm46-7DL – 9.5 cM – Xwmc157-7D/Gb3/Gbz – 5.1 cM – Xbarc53-7D {10171}; Xwmc671-7D – 3.9 cM – Gbz/Xwmc157-7D – 5.1 cM – Xbarc53 {10267}. |
QTL
QGb.unlp.6A for antixenosis was associated with
Xgwm1009-6A and
Xgwm1185-6A in a CS/CS(Synthetic 6A) DH population {
10216}.
Antibiosis was associated with several markers, including
Rc3 (7DS) in chromosome 7D {
10167}.
3.28. Reaction to Soil-Borne Cereal Mosaic Virus⌂ Home
Syn.: Soilborne wheat mosaic. Vectored to the roots by the fungus, Polymyxa graminis
SBM1
| Synonym | SbmCz1 {10132} |
| Chromosome | 5DL |
| Varieties | Cadenza {10132}; Claire {11138}; Moulin {11138}; Tonic {10614}; Tremie {11138}. |
| Varieties (alt.) | Cadenza Sbm2 {11500}. |
| Marker associations | Xbarc110-5D – 14.7 cM – Sbm1 – 2.1 cM – Xwmc765-5D – 3.1 cM – Xbarc144-5D/Xwmc443-5D/RRES01-5D {10614}; Caps marker RRESO1 was developed from an AFLP |
SBM2
| Chromosome | 2BS |
| Varieties | Xi19 {11500}. |
| Varieties (alt.) | Cadenza Sbm1 {11500}. |
Temporary designations
| Chromosome | 5D |
| Varieties | TAM 107-R7 {10683}. |
| Varieties | Heyne {11435}. 5D {11435}. |
| Marker associations | Xgwm272-5D – 20.2 cM – Sbwm1 – 2.2 cM – wsnpCAP11c209198467 – 0.7 cM – wsnpJDc44385568170 – 8.7 cM – Xgwm469 {11435}. Sbm1 and Sbmwm1 |
| Chromosome | 5D |
| Varieties | KS96WGRC40 {10685}. |
| dv | Ae. tauschii TA2397 {10685}. |
| Marker associations | Xcfd010-5DL – 9.5 cM – SBWMV – 11.1 cM – Xbarc144-5D {10685}. |
QSbv.ksu-5D , (R[2] =0.38) was found in Karl 92*2/TA4152-4 {
10273}; the resistance was contributed by Karl 92.
3.29. Reaction to Tapesia yallundae . (Anomorph: Pseudocerosporella herpotrichoides (Fron) Deighton)⌂ Home
Disease: eyespot, strawbreaker footrot.
PCH1
PCH2
PCH3
Temporary designation
Pch Dv {
618}. 4VL {
618}.
| Chromosome bin | 5AL-6 0.68-0.78. |
| Marker associations | Closely associated with Xgwm639-5AL {10771}. |
3.30. Reaction to Tilletia caries (D.C.)Tul., T. foetida (Wallr.) Liro, T.⌂ Home
controversa Disease: Bunt, dwarf smut, stinking smut.
BT1
| Synonym | M1 {135} |
| Chromosome | 2B |
| Sources / synonyms | CS[*] 7/White Federation 38 {1304}. |
| Varieties | Albit {129}; Banner Berkeley {129}; Federation 41 {137}; Regal {129}; Sherman {137}; White Federation 38 {1166}; White Odessa {137}. |
| Varieties (alt.) | Columbia Bt6 {1005}; Hussar Bt2 {135}; Hyslop Bt4 {733}; Martin Bt7 {135}; McDermid Bt4 {734}; Odessa Bt7 {137}; Tyee Bt4 |
BT2
| Synonym | H {129} |
| Varieties | Canus {137}; Seln 1102 {11693}; Seln 2092 {11693}; Selection PS60-1-1075 {551}; Selection 1403 {137}. |
| Varieties (alt.) | Hussar Bt1 {135}. |
BT3
BT4
| Synonym | T {136} |
| Chromosome | 1B |
| Varieties | Bison {1285}; CI15588 {11693}; Kaw {1285}; Nebred {1285}; Omaha {1285}; Oveson {1235}; Tres {heterogeneous} {23}; Turkey 1558 {137}; |
| Varieties (alt.) | Hyslop Bt1 {733}; McDermid Bt1 {734}; Oro Bt7 {137}; Turkey 3055 Bt7 {137}; Tyee Bt1 {22}. Since Bt4 and Bt6 are very |
BT5
| Chromosome | 1B |
| Varieties | Hohenheimer{397}; Selection R60-3432 {551}. |
BT6
| Synonym | R {1418} |
| Chromosome | 1B |
| Varieties | Rio {1418}; Turkey 10095 & 10097 {53}. |
| Varieties (alt.) | Columbia Bt1 {1005}. Since Bt4 and Bt6 are very similar, as well as closely linked, only Turkey 3055 should be used as a definite source |
BT7
| Synonym | M2 {1275} |
| Chromosome | 2D |
| Sources / synonyms | CS[*] 7/Cheyenne 2D {1000}. |
| Varieties | Baart {1275}; Cheyenne {1000}; Federation {1275}; Gallipoli {1000}; Onas {1275}; Ranee {1000}; Selection 1833 {556}; Seln500-77 {11693}. |
| Varieties (alt.) | CI 7090 Bt9 {1000}; Martin Bt1 {137}; Odessa Bt1 {137}; Oro Bt4 {1000}; Turkey 3055 Bt4 {1000}. |
BT8
BT9
| Chromosome | 6DL |
| Varieties | PI 166910 {1006}; PI 166921 {1006}; PI 167822 {1006}; PI 554099 {11299}; Selection M69-2073 {551}; M90387 {11693}. |
| Varieties (alt.) | CI 7090 Bt7 {1000}; Jeff Bt10 {1436}; PI 178383 Bt10 {1006}; Ranger Bt10 {1438}. |
Not clearly differentiated from
Bt11 {
11693}.
BT10
| Synonym | QCbt.spa-6D {M11298} |
| Chromosome | 6DS |
| i | BW553 = Neepawa*6//Red Bobs/PI 178383 {10475}. |
| Varieties | AC2000 {10181}; AC Cadillac {10181}; AC Carma {10181}; AC Crystal {10181}; AC Foremost {10181}; AC Taber {10181}; AC Vista |
| Varieties (alt.) | Jeff Bt9 {1436}; PI 178383 Bt9 {1000}; Ranger Bt9 {1438}; Others {128, 239}. |
| Marker associations | Bt10 was completely linked with a 590 bp fragment produced by UBC primer 196 {239}; RAPD – 1.5 cM – Bt10 {763}; |
Bt10/FSDRSA
– 19.3 cM – Xgwm469-6D
– 1.8 cM – Xwmc749-6D
. The RAPD fragment was sequenced and converted to a diagnostic PCR marker for Bt10
in {0128}. Present in lines with SrCad_ {
10733}.
BT11
| Note | QBt.ifa-6DL {11693}. 3B {11297}; |
| Chromosome | 6DL |
| Varieties | M822123 = PI 554119 {10997, 11693}; Elgin/PI 166910 {10997, 11693}. |
| Marker associations | May be associated with Xbarc180 , Xwmc623 , Xwmc808 and Xgwm285 {11297}; Located between 492.6 and 495.2 Mbp, CS RefSeq 2.1 {11693}. Not clearly |
BT12
| Synonym | QBt.ifa-7DS {11469} |
| Chromosome | 7DS |
| Varieties | PI 119333 {10997}. |
| Marker associations | Associated with 13 markers in a distally located physical region of ~4.3 Mbp {11469}. Validated KASP markers were derived from IWB61302 and IWB50978 {11469}. Although |
{
11182} the genes were not clearly distinguished.
BT13
BT14
| Type varieties | Doubbi CI 13711 {10997}. |
BT15
| Type varieties | Carleton CI 12064 {10997}. |
Temporary desisgnation
| Varieties | PI 173437 {10997}. |
QTL
Blizard (R) / 8405-JC3C (S): DH population. Resistance and markers
Xgwm374-1BS, Xgwm364-1BS and
Xbarc128-1BS were within a 3.9 cM interval {
10783}.
Carberry / AC Cadillac: AC Cadillac contributed QTL
QCbt.spa-6D (
Bt10 ) on chromosome 6D (markers
XwPt-1695 ,
XwPt-672044 , and
XwPt-5114 ). Carberry contributed
QCbt.spa-1B
(
XwPt743523 ),
QCbt.spa-4B (
XwPt 744434 –
Xwmc617 ),
QCbt.spa-4D (
XwPt-9747 ),
QCbt.spa-5B
(
XtPt-3719 ), and
QCbt.spa-7D (
Xwmc273-7D ) {
11298}.
Idaho 444 (R) / Rio Blanco S: RIL population: Three QTL for dwarf bunt resistance:
QDB.ui-7DS (R[2] = 0.3-0.6),
QDB.ui-1A (R[2] = 0.11-0.15) and
QDB.ui-2B (R[2] = 0.06). Two PCR-based markers were developed for the wPt-2565 sequence on chromosome 7DS {
11182}.
IDO835 (R) / Moreland (S): DH population:
Q.DB.ui-6DL (PVE 0.53,
Bt9 region) and
Q.DB.ui-7AL (PVE 0.38) {
11400}.
Trintella / Piko: DH population: One major gene in the chromosome 1BS centromere region, nearest marker
Xgwm273-1B {
11003}. Smaller QTL effects were detected on chromosomes 7A, 7B and 5B in different years. Additional QTL are listed in {
18099}.
KB1
| Varieties | Chris {394}. |
| Varieties (alt.) | CMH77.308 Kb2 {394}. |
KB2
| Varieties | PF7 113 {394}. v CMH77. 308 Kb1 {394}; Shanghai #8 Kb4 {394}. |
KB3
KB4
| Varieties | Shanghai #8 Kb2 {394}. |
KB5
| Note | Recessive {394} |
| Varieties (alt.) | Pigeon Kb6 {394}. |
KB6
| Note | Recessive {394} |
| Varieties (alt.) | Pigeon Kb5 {394}. |
QTL NEED TO SPECIFY GERMPLASM BELOW
| Marker associations | Located in the interval XATPase-3B – Xcdo1164-3B . |
| Marker associations | Located in the interval Xmwg2112-5A – Xcdo20-5A . |
| Marker associations | Located in the interval Xabg391-5A – Xfba351-5A . |
WL711/HD29 (R): RILs: R[2] = 0.25, associated with
Xgwm538-4B {
10498}. WH542/W485 (R) RILs: R[2] = 0.15,
Xgwm6-4BL –
Xwmc349-4BL interval {
10499}.
WH542/HD29 (R): RILs: R[2] = 0.19,
Xgdm116-5BL –
Xwmc235-5BL {
10499}.
WH542/HD29 (R): RILs: R[2] = 0.13,
Xwmc105-6BS –
Xgwm88-6BS {
10499}.
3.32. Reaction to Ustilago tritici (Pers.) Rostrup⌂ Home
Disease: Loose smut.
UT1
| Varieties | Florence/Aurore {1073}; Renfrew {1073}; Red Bobs {1074}. |
UT2
| Varieties | Kota {1073}; Little Club {1073}. |
UT3
UT4
UT5
| Synonym | Ut-Fore {10940}, Ut-X {11164} |
| Chromosome | 5BL |
| Varieties | Foremost {10940}. |
| Marker associations | Xgpw5029 – 2.8 cM – Ut5 – 1.3 cM – Xbarc232-5b {10940}. See Ut-x . Race T10 was used for analysis {10940}. |
UT6
| Synonym | QUt.spa-5B {11168} |
| Chromosome | 5BL |
| Varieties | AC Foremost {11169}; AC Karma {10040}; AC Vista {11168}; Chinese Spring {11169}; Glenlea {11169}; HY320 {11169}; Oasis {11169}. |
| Marker associations | Xgpw5029-5B – 2.8 cM – Ut6 – 2.8 cM – Xbarc232-5B {11169}. |
UT7
| Synonym | QUt.spa.7A {11168} |
| Chromosome | 7A |
| Varieties | SC8021V2 {11168}. |
UT8
| Synonym | QUt.spa-3A {11168} |
| Chromosome | 3A |
| Varieties | 9340-SP {11168}; Glenlea {11168}. |
UT9
| Synonym | QUt.spa-6B {11168} |
| Chromosome | 6B |
| Varieties | SC8021V2 {11168}. |
UT10
| Synonym | QUt.sps-6D {11168} |
| Chromosome | 6D |
| Varieties | SC80-21V2 {11168}. |
UT11
| Chromosome | 7BS |
| Varieties | DH line TD14XDIA*B0075, CN 120264 {11406}; Sonop, TD-14 {11406}. |
| Marker associations | Co-segregation with BS0002256251, ExcabiburC3489182 and Kukrirepc71778644 at 0.43, 1.20 and 1.25 Mbp {11406}. Ut11 conferred resistance to race T2 but not T9 and T39; resistance |
Temporary designations
| Chromosome | 5BS |
| Varieties | BW728 {11729}. |
| Marker associations | Mapped to a region close to Utd1 {11729}. Identified in a BW278 / AC Foremost cross with a Ustiago teitici isolate virelent to AC Foremost |
| Chromosome | 5BS |
| Type varieties | D93213 {10684}; P9163-BJ08*B {10684}; VIR 51658 {10684}. |
| Marker associations | SCAR – 3.2 cM – Utd1 – 5.9 cM – Xgwm234-5B {10684}. |
| Varieties | Biggar BSR {11164}. |
| Marker associations | Xcrc4-2B – 14 cM – Ut-x – 10 cM – Xabc153-2B.2 {11164}; Xcrc4-2B.2 (Syn. Xcrc4.2 ) is a SCAR. |
Resistance to race 19 was associated with chromosome 6A of Cadet, Kota, Thatcher and TD18 {
0208}. In the case of Cadet, resistance was localized to 6AS {
0208}.
3.33. Reaction to Wheat Spindle Streak Mosaic Bymovirus (WSSMV)⌂ Home
WSSMV is soil-borne and vectored by the fungus Polymxa graminis . This virus has some sequence similarity to Wheat Yellow Mosaic virus {10285}. Wheat streak mosaic disease can also be caused by Triticum mosaic virus, which is also known as High Plains Wheat mosaic virus. Low rates of seed borne transmission of WSSMV are reported.
WSS1
| Note | Derived from Haynaldia villosa . T |
| Chromosome | 4VS |
| Chromosome | 4DL |
4D(4DL.4VS) {
10271}.
QTL
Geneva (R) / Augusta (S): 79% of the variation between these accessions was associated with markers
Xbcd1095-2D and
Xcdo373-2D located 12.4 cM apart in chromosome 2DL {
0131}.
3.34. Reaction to Mosaic Virus⌂ Home
Vectored by wheat curl mites, Eriophyes tulipae and E. tosichella . See: Resistance to colonization by Eriophyes tulipae . According to {10226} WSMV may also be see-borne. At least some sources of resistance to WSMV are also effective against Triticum mosaic virus.
WSM2
| Chromosome | 3BS |
| Varieties | Clara CL PI 1665948 {11329}; CO960293-2 {10802}; Oakley CL PI 670190 {11329}; RonL {10898}; Snowmass {10802}. |
| Marker associations | Wsm2 – 5.2 cM – XSTS3B55 {10802}; Xbarc102-3B – 1.6 cM – Wsm2 {10802}; Xgwm389-3B – 30.8 cM – Wsm2 – 45.2 cM – Xgwm566-3B |
Wsm2 confers resistance at temperatures below 19C {
10802}. Allele
Xbarc102-3B 219 was the best predictor for
Wsm2 {
10982}.
WSM3
3.35. Reaction to Xanthomonas campestris pv. undulosa⌂ Home
Disease: Bacterial leaf streak
BLS1
| Varieties (alt.) | Pavon Bls2 {244}; Mochis T88 Bls3 Bls4 {244}; Angostura F88 Bls5 {244}. |
| Varieties (alt.) | Pavon Bls1 {244}. |
| Varieties (alt.) | Mochis T88 Bls1 Bls 4 { 244}. |
| Varieties (alt.) | Mochis T88 Bls1 Bls3 {244}. |
| Varieties (alt.) | Turnco F88 {244}; Angostura F88 Bls1 {244}. |
bls1 bls2 bls3 bls4 bls5 : Alondra {
244}.
3.36. Resistance to Colonization by Eriophyes tulipae ( Aceria tulipae )Mite pest: Wheat⌂ Home
curl mite.
Eriophyes tulipae is the vector of wheat streak mosaic virus (WSMV) and the wheat spot mosaic agent (WSpM).
CMC1
| Chromosome | 6DS |
| i | Norsa*5/Cmc1 {10166}. |
| Varieties | Ae. squarrosa CI4/Novamichurinka (= AC PGR 16635) {1467}; Norstar derivative {222}. |
CMC2
| Note | Derived from Th. elongatum . 6A = T |
| Chromosome | 6AS |
CMC3
| Note | Derived from Secale cereale. 1A = |
| Chromosome | 1AL |
| Chromosome | 1RS |
| i | Norstar*5/Cmc3 {10166}. Need to confirm relationship of 1RS segment in Amigo and Salmon as this NIL was derived from KS80H4200 a Chinese Spring Salmon line |
| Varieties | Amigo; TAM107 {222}. |
| Varieties (alt.) | KS96GRC40 Cmc4 {222}. |
| Marker associations | Wheat lines with the 1RS segment and hence Cmc3 can be selected with the rye-specific SSR Xscm09-1R {222}; |
CMC4
| Chromosome | 6DS |
| Varieties (alt.) | KS96WRC40 Cmc3 {222}. |
| Varieties | TAM112 {11612}; TAM115 {11612}; TAM204 {11612}. |
| dv | Ae. tauschii accession {222}; Ae. tauschii TA1618 (11612}. |
| Marker associations | XksuG8-6D – 6.4 cM – Cmc4 – 4.1 cM – Xgdm141-6D {222}. |
3.37. Reaction to Wheat Yellow Mosaic Virus⌂ Home
WYMV is soil-borne and vectored by the fungus Polymixa graminis . This virus has some sequence similarity to Wheat Spindle Streak Mosaic {10258}, another bymovirus.
Temporary designations
| Chromosome | 2DL |
| Varieties | Ibis {10750}; Jagger {10750}; KS 831957 {10750}; Madsen {10750}; Yumechikara {10750}. |
| Marker associations | Xwmc181-2D – 12.4 cM – YmIb – 2.0 cM – Xcfd16-2D – 2.0 cM – Xwmc41-2D – 3.1 cM – Xcfd168-2D {10750}. |
The relationship of
YmIb to a previously mapped gene in 2DL for resistance to WYMV and WSSMV in Yangfu 9311 {
10258} and a Geneva derivative {
0131} was not established.
| Chromosome | 2DL |
| Varieties | Yangfu 931 {10258}. |
| Marker associations | Xpsp3039-2D/Xwmc181-2D – 0.7 cM – Xwmc41-3D – 8.1 cM – Xgwm349-2D {10258}. |
| Note | Q.Ymym {11660}. |
| Chromosome | 2DL |
| Chromosome bin | 2DL9-0.76-1.00. |
| Varieties | Fielder {11645}; Yining Xiaomai {11186}. |
| Marker associations | Xwmc41-2D – 3.7 cM – 2SNP86.2 – 0.4 cM – QYm.nau-2D – 1.0 cM – 2EST784 {11186}. |
According to {
11645}
QYm.nau-2D is a natural alien translocation from an
Aegilops species and several subsequent wheat haplotypes arose from rare recombination events. This QTL is present in a wide range of cultivars from Europe, USA, Japan, and China {
11645}.