3. Pathogenic Disease/Pest Reaction⌂ Home

3.1. Abiotic Stress Responses: Dehydrin-response Element Binding Factors⌂ Home

DREB proteins are a large family of transcription factors induced by abiotic stresses. Using genomespecific primers as probes for an orthologous Dreb1 gene series was placed on chromosomes 3A, 3B and 3D 10729. SNPs in DREB-B1 permitted mapping in chromosome 3BL in the ITMI (Opata 85 / W7984) mapping population. See also section 2.2.42.

DREB A1 . 3A 10729.

Dreb-A1
DREB-B1
Chromosome3BL
Marker associationsXmwg818-3B – 27.3 cM – Dreb-B1 – 11.2 cM – Xfbb117-3B 10729.
Dreb-B1
Dreb-B1a
VarietiesOpata 85 10729.
Dreb-B1b
VarietiesW7984 10729.
DREB-D1 .
Dreb-D1
Chromosome3D

3.2. Reaction to Barley Yellow Dwarf Virus⌂ Home

Disease: Barley yellow dwarf; Cereal yellow dwarf

BDV1

Bdv1
Chromosome7D
Chromosome7DS
iJupeteco 73R (compared to Jupeteco 73S) 1363.
VarietiesAnza 1379; Condor BW3991 1379; Tyrant BW3872 1379; Hahn BW4097 1379; Parrot BW108171379; Siren BW18643 1379; Many CIMMYT genotypes. Bdv1 is completely linked with Ltn , Sr57 , Lr34 and Yr18 . See Ltn , Lr34 , Yr18 .
Note: BW = CIMMYT wheat accession number. BDV2
Bdv2
NoteDerived from Th. intermedium 7D = T7DS-7Ai#
Chromosome1S
7Ai#1L group.7DL = T7DS.7DL7Ai#1L 0182, 552.

BDV3

Bdv3
NoteDerived from Th. intermedium cv. Ohahe 10158
Chromosome7DS
7DL-7EL 10157.

3.3. Reaction to Bipolaris sorokiniana⌂ Home

Diseases: Spot blotch and common root rot. Spot blotch

The pathogen harbours Tox A in common with Parastagonospora nodurum , Parastagonospora avenaria tritici and Pyrenophora tritici-repentis {11255, 11768}.

SB1

Sb1
NotePartial resistance
Chromosome7DS
iHUW234Ltn+ 10855.
VarietiesSaar 10856; Lines with Lr34/Yr18/Pm38/Sr57 - see Reaction to Puccinia triticina , Reaction to Puccinia striiformis , Reaction to Blumeria graminis , Reaction to Puccinia graminis , Leaf tip necrosis.
Marker associationsPleiotropic or closely linked with Lr34/Yr18/Pm38/Sr57 located between Xgwm1220-7DS and Xswm10-7DS (1.0 cM interval) 10856; see also Reaction to Puccinia triticina , Reaction to Puccinia striiformis , Reaction to Puccinia graminis and Reaction to Blumeria graminis .
cPutative ABC transporter 10648.

SB2

Sb2
NoteQSb.bhu-5B 11255.
Chromosome5BL
Chromosome bin5BL1-0.55-0.75.
VarietiesNing 8201 11255; Yangmai 6 11255; YS116 11255.
Marker associationsXgwm639-5B – 1.4 cM – Sb2 – 0.06 cM – Xgwm1043-5B 11255.
sb2 . [ Tsn1 11255.

SB3

Sb3
Chromosome3BS
Chromosome bin3BS8-0.78 -1.00.
VarietiesLine 621-7-1 11256.
Marker associationsSb3/XWGGC3959 were mapped to a 2.2 cM interval between Xbarc133/Xbarc147/Xcfp30-3B/XWGGC5911 and XWGGC4320 11255; XWGGC12798 – 0.08 cM – SB3XW GGC9893/XWGGC10235 – 0.07 cM – XWGGC6119 11255.

SB4

Sb4
Chromosome4BL
VarietiesLine 7H9094 11592.
Marker associationsYK12831 – 1.18 cM – SB4/YK12828 – 0.01 cM – YK13104 11592. Line 7H909 was selected from a segregating F4 line from a cross of resistant cultivars GY17 and Zhongyu 1211 11592.
QTL Yangmai 6 (R)/Sonalika (S): RIL population: AUDPC was controlled by four QTLs derived from Yangmai 6, viz. QSb.bhu-2AL ( Xbarc353-2AXgwm445-2A , R[2] =0.148), QSb.bhu-2BS ( Xgwm148-2BXgwm375-2B , R[2] =0.205), QSb.bhu-5BL ( Xgwm67-5BLXgwm371-5BL , R[2] =0.386) and QSb.bhu-6DL ( Xbarc173-6DXgwm732-6DL , R[2] =0.225) 10719.

3.4. Reaction to Blumeria graminis DC.⌂ Home

Disease: Powdery Mildew.

Resistance genes and their molecular associations are reviewed in 10141.

PM1

Pm1a
SynonymMla 348, Pm1 130, Mlt 1175
Chromosome7AL
Chromosome7A
iAxminster/8[*] Chancellor 132; CI 14114 = As II/8[*] Chancellor 132; CI 13836/8[*] Chancellor 132; Kenya C6041/5[*] Federation 1168; Norka/8[*] Chancellor 132.
Sources / synonymsCS[*] 5/Axminster 7A 1293.
VarietiesAnfield 98; As II 130; Axminster 1175,130; Birdproof 165; Bonus 1554; CI 13836 130; Converse 1175; Fedka
939; Festival 1554; Fram I 130; Huron CI 3315 1175,1554; Kenora 1554; Kenya W744 = C6041 1175,130; Norka 1175,130; Pika 130; Sweden W1230 1554; Thew 1175; TU 4 130; Zhengzhou 871124 570.
Pm1b
VarietiesMocZlatka 562.
Pm1c
SynonymPm18 853, 562
VarietiesBlaukorn 0011; M1N 562,1628; M1N was described as an undesignated subline of Weihenstephan M1540.
Marker associationsAFLP marker 18M2 was diagnostic for Pm1c 0011.
Pm1d
VarietiesT. spelta var duhamelianum TRI2258 562.
Marker associationsAFLP marker 18M1 various Pm1 alleles 0.9 cM 0011.
Pm1e
SynonymPm22 1134
VarietiesElia1134; Est Mottin 1134; Ovest 1134; Tudest 1134; Virest 1134.
**PM2** TraesCS5D01G044600 11503.
Pm2a
SynonymMlu 1175, Mlx 1088, Pm2 130
[ Mlx {10885D 1007; Pm48 10935. 5DS945.
Pm2b
NotePutatively derived from Agropryron cristatum
SynonymPmPB3558 11049, PmKM2939 11049
Chromosome binC-5DS1-0-0.63.
VarietiesKM2939 11049; PB355811075.
Marker associationsXscar112 – 0.5 cM – Pm2b – 1.3 cM – Xscar203/Xmag6176/Xcfd81-5D 11049; Xcfd81-5D – 5.5 cM – PmPB3558 – 3.9 cM – Xbwm25 – 0.9 cM – Xbwm21 – 0.9 cM – Xbwm20 11075. Deleted : Identified as Pm2a 11503.
Pm2c
SynonymPmNM 11061
Chromosome5DS
Chromosome bin5DS-1-0-0.63.
VarietiesNiaomai 11061.
Marker associationsXcfd81-5D – 0.4/0.1 cM – Pm2c – 7.5/4.9 cM – Xcfd78-5D 11061.
DeletedIdentified as Pm2a 11503.
Several alleles of Pm2 with wheat and alien origins have been reported in Chinese genotypes – see temporary designations. The complex nature of temporarily named powdery mildew resistance genes in the Pm2 region is discussed in 11380. Several alleged alleles at the Pm2 locus are likely Pm2a 11503.
PM3
NotePM3 has 92.9% identity with PM8 at the protein level 11398. Pm3a 130, 132.
SynonymMla 1168
Chromosome1A
1AS 947, 943.
Pm3d
Note[ Mlk 434, Ml-k 540, 10405. 1° 1628.
VarietiesAxona 0313; Cornette 0313; Herold 540; Indian 4 0313; Kadett 0313; Kanzler 0011; Kleiber 0313; Kolibri {540, 542, 1628}; Ralle 540; Socrates {heterogeneous} 540; Star {heterogeneous}540; Syros 540; Vergas 10843.
Varieties (alt.)Kadett Pm4b 540; Turbo Pm4b 540.
cSequence AY9398881 10292. DQ251488, DQ517518 10405.
Pm3e
VarietiesSydney University Accession W150 = AUS 6449 {939, 1628}.
Varieties (alt.)Cortez Pm5 allele 10843.
Marker associationsPm3e – 7.1 cM – Xwmc818-1A 10843.
Pm3f
iMichigan Amber/8[*] Chancellor 1628; This allele was distinguished from Pm3c with only one of 13 pathogen cultures.
VarietiesViza 10843.
cSequence DQ071554 10292.
Pm3g
SynonymMlar 854
Chromosome1AS
Chromosome1A
VarietiesAvo1629; Aristide1629; Champetre 0313; Courtot 1629; Lutin 0313; Oradian 0313; Rubens 0313; Soissons 0313; Valois 0313.
Marker associationsPm3g – 5.2 cM – Gli-A5 – 1.9 cM – Gli-A1 0070; Pm3g was completely linked to microsatellite Xpsp2999 313.
cSequence DQ251489, DQ517919 10405.
The Pm3a, Pm3b, Pm3d and Pm3f alleles form a true allelic series based on sequence analysis 10292. Following the cloning and sequencing of Pm3b 10064, 6 other alleles were sequenced 10405. The Chinese Spring (susceptible) allele, Pm3CS , considered to be ancestral and present in many hexaploid and tetraploid wheats, was also transcribed {10405, 10406}. Other wheats possessed a truncated sequence (e.g. Kavkaz), or were null 10405,10406. Unique markers were developed for all 8 transcribed alleles, and for individual alleles 10405. Alleles Pm3b, Pm3d , and Pm3f were detected in Scandinavian varieties using allele-specific markers 10681.
PM4
TraesSYM2A03G00828360 11774.
Pm4a
SynonymPm4 131
Chromosome2AL
iCI 14123 = Khapli/8[*] Chancellor 131; CI 14124 = Yuma/8[*] Chancellor 131.
VarietiesAikang 58 11753; Steinwedel[*] 2/Khapli 939; Yangmai 10 10176; Yangmai 11 10176.
Type varietiesKhapli 131; Valgerado 97; Yuma 131.
Marker associationsCo-seg with Xbcd12312A.2 & Xcdo678-2A using F2s864; Xbcd1231-2A.1 – 1.5 cM – Pm4 – 1.56 cM – Xbcd292-2A 864; Pm4a – 3.5 cM AFLP markers 4aM1 and 4aM2 11; Xbcd1231-2A was converted to a STS marker and to a Pm4a -specific dominant PCR marker 10176; Xgwm356-2A – 4.8 cM – Pm4a 10176.
cSimilar structure to Pm4b 11525.
Pm4b
SynonymMle 1591
52. 2AL 1464.
Pm4c
Note[ Pm23 1618] 2AL 10583 – earlier reported on
Chromosome5AL
Varieties (alt.)81-7241 Pm8 suppressed{1618, 10583}.
Marker associationsXbarc122-2 – 1.4 cM – Pm4c – 3.5 cM – Xgwm356-2 10583. Pm4b and Pm4c are identical at the nucleotide level 11774.
Pm4d
Chromosome2AL
Chromosome bin2AL1-0.85-1.00.
VarietiesGR18-1 11701; SYMattis {11525, 11775};. Tianmin 668 11702; Tm27d2 = WW St2022/Tm27//Amor = TRI 29584 10744.
dvT. monococcum Tm27 10744. v: ma: A 218 bp fragment was amplified with STS marker ResPm4 as were other Pm4 alleles 10744, Located within the intervals 75.889 – 78.702 Mb 11701 and 76.148 – 76.803 11702..
Pm4e
Chromosome2AL
VarietiesD29 11317.
Marker associationsXgdm93-2A – 4.9 cM – Pm4e/Xstsbcd1231 – 1.8 cM – Xhbg327-2A 113017; Xwgrc763-2A – 0.13 cM – Pm4e/Xwgrc872-2A/Xwgrc869-2A – 0.58 cM – Xwgrc982-2A , a region of about 6.1 Mb 11335. Pm4d and Pm4e_ are identical at the nucleotide level 11774.
A recessive resistance gene ( pmXXM 11661) in Xiaomaomai had a similar protein structure to Pm4d , Pm4e and Pm4h 11661. Pm4f . v: WATDE0571 11775. Pm4g . v: WW-740 11775. Pm4h . v: WW-474 11774. Pm4i . v: WATDE0048 11775. Pm4j . v: WATDE0592 11775. Add note at end of Pm4 section: Some variants of PM4 confer resistance to wheat blast {11632, 11735, 11775} – see Reaction to Magnaporthe grisea .
PM5
TraesCS7B02G441700 (susceptible allele) (chr7B: 706.811-706.816 Mb) 11533.
Pm5a
NotePm5a was transferred to hexaploid wheat from T. dicoccum via Hope and H-44. Recessive.
SynonymPm5 787, mlH 771
Chromosome7B
Chromosome7BL
iHope/8[*] Chancellor = CI 14125570.
Sources / synonymsCS[*] 6/Hope 7B 964, 771.
VarietiesAlidos 854; Aotea 964; Caldwell 786; Ga 1123 786; Galaxie 0257; Glenwari 964; Hardired 786; Hope 964; H-44 964; Kontrast 854; Kormoran 1079; Kutulukskaya 257; Lambros 0257; Lawrence 964; Navid 0257; Pagode 0257; Redcoat 97; Redman 964; Regina 0257; Renown 964; Selpek 540; Sicco 96, 0257; Spica 964; Tarasque0257; Warigo 964; Zolotistaya 0257.
Varieties (alt.)Arthur Pm6 786; Coker 983 Pm6 786; Double Crop Pm6 786; Granada Pm8 541; Saar Pm38 Pm39 10481; Sensor Pm8 541.
cGenBank MK955160.
Pm5b
SynonymMli 558, 540
VarietiesAquila{96, 541}; Carimulti 541; Cariplus 541; Cucurova 0257; Dolomit 541; Falke 541; Flanders 96; Fruhprobst 0257; Ilona 0257; Ibis 96; Kirkpinar-79 0257; Kontrast 0257; Kormoran 541; Krata 541; Markant 541; Mercia 1531; Milan 541; Nadadores 0257; Reiher 541; Rektor541; Rothwell Perdix 96; Siete Cerros 0257; Severin 541; Sicco 96; Sperber 541; Tukan 541; Una 0257; Urban 541; Wattines 541; Wettiness 0257.
Varieties (alt.)Bert Pm6 541; Boxer Pm4b 541; Crossbow Pm2 Pm6 98; Kristall Pm8 541; Mission Pm4b {1531, 541}; Parade Pm2 Pm6 1531.
cGenBank MK955159.
Pm5c
Chromosome7B
VarietiesT. sphaerococcum cv. Kolandi 0257.
Pm5d
Chromosome7B
Chromosome bin7BL 0.86-1.00 10542.
iIGV 1-455 = CI 10904/7[*] Prins 0257; CI 10904/7[*] Starke 0257.
VarietiesDream 10542.
Marker associationsXgwm611-7B – 2.1 cM – Pm5d – 2.0 cM – Xgwm577-7B – 1.0 cM – Xwmc581-7B 10542. c Same sequence as Pm5e 11533.
Pm5e
NoteRecessive and hemizygous effective 0258; usually dominant 11708. [ mlfz 0259]; PmAL11 11708.
iH962R {11707).
VarietiesAL11 11708. Baiyouyantiao (previously published as PmBYYT 11533); Fuzhuang 30 0258; Hongquanmong (previously published as PmH 11533; Mazhamai (previously published as Mlmz 11533); Tangmai 4 (previously published as PmTm4 {11533, 10961, 11533}); Xiaobaidongmai (previously published as Pmxbd {0258, 11533}).
Marker associationsXgwm1267-7B – 6.6 cM – Pm5e – 12.6 cM – Xubc405 628 -2B 0258. KASP marker AL11-K2488 11708.
cIdentified as a CC-NBS-LRR 11533. GenBank MK955156.
Although Duanganmang ( PmDGM ) had an identical sequence and UTR to Pm5e , a second completely linked gene was postulated to account for a different response pattern to the Pm5e control 11705. pm5.

PM6

Pm6
SynonymMlf 626
Chromosome2B
iCI 13250/7[*] Prins 0069; CI 12559/8[*] Prins 0069; Eight Prins derivatives 10576; PI 170914/7[*] Prins 6 NILs based on Prins {0139, 0069}.
Varieties1969 IVGS Line
C 626; Abe 97,1256; Coker747 {786, 1079}; Mengavi 97; Oasis 786; Timgalen 98; TP 114/2[*] Starke deriv. B 626.

PM7

Pm7
NoteDerived from S. cereale cv. Rosen. 4BL 270, 271, 389 = T
Chromosome4BS
4BL-5RL 543, but more recently revised to T4BS.4BL-2R#IL 389, 380.

PM8

Pm8
NoteDerived from Petkus rye - see Yr9, Lr26, Sr31 .
Chromosome1BL
Chromosome1RS
1R(1B).

PM9

Pm9
Chromosome7AL
Chromosome7A
VarietiesN14 562.
Varieties (alt.)Anfield Pm1a 1287; Mephisto Pm1a Pm2 540; Normandie Pm1a Pm2 347; Pompe Pm1a 1287; Ring Pm1a 1287.

PM10

Pm10
Chromosome1D
VarietiesNorin 4 1482; Norin 26 1482; Norin 29 1482; Penjamo 62 1482; Shinchunaga 1482.
Varieties (alt.)T. spelta duhamelianum Pm11 1481. Pm10 was detected using a culture derived from a hybrid of B. g. tritici and B. g. agropyri .

PM11

Pm11
Chromosome6BS
VarietiesChinese Spring 1481; Salmon 1481; T. compactum No. 44 1481.
Varieties (alt.)T. spelta duhamelianum Pm10 1481. Pm11 was detected using a culture derived from a hybrid of B. g. tritici and B. g. agropyri

PM12

Pm12
NoteDerived from Ae. speltoides . The earlier location of 6A 1017 was not correct. 6B = 6BS-
Chromosome6SS
6SL 572, 598. 6S[1] S 598.

PM13

Pm13
NoteDerived from Ae. longissima accession TL01. T
Chromosome3BL
3BS-3S[1] #1S.

PM14

Pm14
Chromosome6B
Varieties (alt.)Akabozu Pm10Pm15 1478; Kokeshikomugi Pm15 1478; Norin 10 Pm15 1478.
Pm14 and Pm15 were detected using hybrids between B. g. tritici and B. g. agropyri cultures.

PM15

Pm15
Chromosome7DS
Varieties (alt.)Akabozu Pm14 1478; Chinese Spring Pm11 1478; Kokeshikomugi Pm14 1478; Norin 4 Pm10 1478; Norin 10 Pm14 1478; Norin 26 Pm10 1478; Shinchunaga Pm10 1478; T. macha subletschumicum Pm10 1478; T. compactum No. 44 Pm11 1478.
Pm14 and Pm15 were detected using hybrids between B. g. tritici and B. g. agropyri cultures.

PM16

Pm16
Chromosome4A
Chromosome5B
VarietiesLine 70281 = Norman/*3 Beijing 837 10217; Norman lines with resistance from T. dicoccoides CL10600251201.
Type varietiesT. dicoccoides CL1060025 1201.
Marker associationsPm16 – 5.3 cM – Xgwm159-5B 10217.
To account for the different chromosome locations a 4A-4B translocation was suggested 10217. Based on the 5B location and similar disease responses Pm16 and Pm30 may be the same 10217.

PM17

PM18
Deleted, see Pm1c .

PM19

Pm19
Chromosome7D
VarietiesT. durum 'Moroccos 183'/ Ae. tauschii AE 457/78 853.
Varieties (alt.)Synthetic XX186 Pm2 853.
dvAe. tauschii 853.

PM20

Pm20
SynonymM1P6L 543
6BL = T6BS.6R#2L 386, 389, 543.

PM21

Pm21
Note6AS = T
Chromosome6AL
6VS#2 {1177, 11714}.
PM22
Deleted. Pm22 . Deleted, renamed as Pm1e
PM23
Deleted. Pm23 . Deleted, Renamed as Pm4c . PM24 . TraesCS1D02G058900; AET1Gv20142700. This locus is also named RMG1 ( RWT4 ) – see Reaction to Magniporthe grisea .
Pm24
SynonymPm24a 571, Pm24b 10994, WTK3 11414
Chromosome6D
Chromosome1DS
Chromosome bin1DS5-0.54-1.00.
VarietiesBaihulu {10994, 11414}; Chiyacao 571; Hongmangmai 11414; Hulutou {11413, 11414}.
Marker associationsXgwm789-1D/Xgwm603-1D – 2.4 cM – Pm24/Xgwm1291-1D – 3.6 cM – Xbarc229-1D {10109, 10957}; Xgwm789/Xgwm603-1D – 2.4 cM – Pm24 – 6 cM – Xbarc229-1D {10109, 10957, 10994}. Located in a 9.3 cM region flanked by Xgwm337-1D and Xcfd83/Xcfd72-1D 11413.
cPm24 encodes a tandem kinase protein with putative pseudokinase domains. The gene was designated Wheat Tandem Kinase 3 ( WTK3 ) – this gain of function mutation was conferred by a 6 bp deletion of lysine/glycine codons (K400G401) in the KIN1 domain 11414. GenBank MK950855. The same candidate gene was predicted for PmDTM in Datoumai (11556), but according to those results Chiyacao, Hulutou and Datoumai showed differential responses to an array of Bgt isolates 11414.

PM25

Pm25
SynonymPmTmb {1344, 1343}
Chromosome1A
VarietiesPI 599035 = NC94-37781344.
Varieties (alt.)NC96BGTA5 = Saluda[*] 3/PI 427662 Pm3a 1343.
dvT. monococcum PI 427662 1343.
Linked with 3 RAPDs, the nearest, OPAG04950, at 12.8 +/- 4.0 cM 1343; Associated with 3 RAPDs 1344.

PM26

Pm26
NoteRecessive 0001.
Chromosome2BS
Sources / synonymsBethlehem[*] 8/ T. turgidum var. dicoccoides 2BS 0001.
Type varietiesT. turgidum var. dicoccoides TTD140 0001.
Marker associationsCo-segregation with Xwg516-2B 0001.

PM27

Pm27
Note6B (6B-6G) 0002.
VarietiesLine 146-155-T 0002.
Type varietiesT. timopheevii var. timopheevii K- 38555 0022.
Marker associations6BS...... Xpsr8/Xpsr964-6B – Pm27 – Xpsr154/Xpsr546-6B ......6BL 0002; Cosegregation with Xpsr3131-6B 0002.

PM28

Pm28
Chromosome1B
VarietiesMeri 0022.

PM29

Pm29
NoteDerived from Ae. ovata .
Chromosome7DL
VarietiesPova 0129.
Marker associationsLocation confirmed by cosegregation with molecular markers 0129.

PM30

Pm30
Note[ MIC20 ]
Chromosome5BS
Varieties87-1/C20//2*8866 Seletion 0163.
Marker associationsPm30 – 5.6 cM – Xgwm159-5B 0163. Pm30 could be the same as Pm16 10217.
PM31 Deleted. This gene designation 0301 is not valid; subsequent studies 10918 showed the gene is Pm21 .
Pm31
SynonymmlG 0301
Chromosome6AL
VarietiesG-305-M/781//3*Jing411 0301.
Type varietiesT. dicoccoides G-305-M 0301.
Marker associationscent.... Pm31 – 0.6 cM – Xpsp3029.1-6A – 2.5 cM – Xpsp3071-6A 0301.

PM32

Pm32
NoteDerived from Ae. speltoides 10025. 1B=
Chromosome1BL
Chromosome1SS
VarietiesL501 = Rodina*6/ Ae. speltoides 10025.

PM33

Pm33
SynonymPmPS5B 10205
Chromosome2BL
VarietiesAm9 = T. carthlicum PS5/ Ae. umbellulata Y39 10205.
tv2T. carthlicum PS5 PmPS5A 10205.
Marker associationsXgwm536-2B – 18.1 cM – Pm33 – 1.1 cM – Xwmc317-2B – 1.1 cM – Xgwm111-2B – 1.8 cM – Xgwm383-2B 10205.

PM34

Pm34
Chromosome5DL
VarietiesPI 604033 = NC97BGTD7 = Saluda*3/ Ae. tauschii TA2492 10241.
dvAe. tauschii TA2492 10241.
Marker associationsXbarc177-5D – 5.4 cM 2.6 cM – Xbarc144-5D 10241.

PM35

Pm35
Chromosome5DL
VarietiesNC96BGTD3 = PI 603250 = Saluda*3/TA2377 10342.
dvAe. tauschii ssp. strangulata TA2377 10342.
Marker associationsXcfd26-5D – 11.9 cM – Pm35 10342.

PM36

Pm36
Chromosome5BL
Chromosome bin5BL6-0.55-0.76 10356.
Type varietiesMG-FN14999, a durum backcross line 5BIL-29 10356; T. turgidum ssp. dicoccoides MG29896 10356.
Marker associationsXcfd7-5B – 10.7 cM – Pm36 – 0.8 cM – EST BJ261636 – 8.9 cM – Xwmc75-5D 10356; 5BIL-42 identified as the derivative with shortest T dicoccoides segment; IWB7454 (537.36 Mb, Svevo RefSeq) – PM36IWB22904 (538.44 Mb) 11709.

PM37

Pm37
Chromosome7AL
VarietiesPI 615588 = NC99BgTAG11 = Saluda*3/PI 42731510372.
Type varietiesPI 427315 = T. timopheevii ssp. Ameriacum 10372.
Marker associationsPm37 (PmAG11) was about 15 cM proximal to a cluster of markers that earlier co-segregated with Pm1 10372; A cross indicated linkage between Pm37 and Pm1 10372; Xgwm332-7A – 0.5 cM – Pm37 – 0.5 cM – Xwmc790-7A – 15.5 cM – Pm1 10372.
A further gene derived from T. monococcum PI 427772 was identified in BCBGT96A = PI 599036 = Saluda*3/PI 427772 10479. A single resistance gene was identified on chromosome 7AL in hexaploid germplasm NC96BGT4 (a T. monococcum derivative). This gene was proximal to Pm1 and considered to be different from Pm37 , although possibly allelic 10274. **PM38** TraesCS7D03G0183600
Pm38
NoteAdult plant resistance
Chromosome7DS
iRL6058 = Tc*6/PI 5854810374.
VarietiesLines with Sr57/Lr34/Yr18 .
Varieties (alt.)Saar Pm5a Pm39 10481.
Marker associationsXgwm1220-7D – 0.9 cM – Lr34/Yr18/Pm38 – 2.7 cM 10374.
cABC transporter; See Lr34 . This gene is identical to Yr18, Sr57, Lr34 and Ltn and confers stem rust resistance in some genetic backgrounds; see Reaction to Puccinia triticina , Reaction to Puccinia striiformis .

PM39

Pm39
NoteAdult plant resistance
Chromosome1BL
iAvocet-R+Lr46/Yr29 = AvocetR*3//Lalb mono 1B*4/Pavon 76 10480.
VarietiesGenotypes with Lr46/Yr29 ; see Reaction to Puccina
triticina , Reaction to P. striiformis .

PM40

Pm40
NoteDerived from Th. intermedium 10539. Pm40 was not derived from Th. intermedium 11710.
Chromosome7BS
Chromosome binC-7BS-1-0.27.
VarietiesGRY19 10539; Partial amphiploid TAI7047 10539; Yu 10539; PI 672538 11710; Yu24 10539.
Marker associationsXwmc426-7B – 5.9 cM – Xwmc3347B – 0.2 cM – Pm40 – 0.7 cM – Xgwm297-7B – 1.2 cM – Xwmc364-7B 10539; Xwmc-7B – 0.58 cM – Pm40 – 0.26 cM – BF291338 11710. Flanked by EST markers BF478514 and BF291338 11711.
cTraesCS7B01G164000 , an NLR with an additional NBS region was identified as a candidate 11711.

PM41

Pm41
NoteDerived from T. dicoccoides .
Chromosome3BL
**bin:

PM42

Pm42
NoteDerived from T. dicoccoides. Recessive.
Chromosome2BS
Chromosome bin2BS-0.75-0.84.
VarietiesP63 = Yanda 1817/G303-1M/3*Jing 411 10559.
Type varietiesT. dicoccoides G303-1M 10559.
Marker associationsBF146221 – 0.9 cM – Pm42 – Xgwm148-2B 10559.

PM43

Pm43
NoteDerived from Th. intermedium .
Chromosome2DL
VarietiesLine CH5025 = 7621696/TAI7045//2*Jing 411 10560; Partial amphiploid TAI7045 10560.
alTh. intermedium Z1141 10560.
Marker associationsXwmc41-2D – 2.3 cM – Pm43 – 4.2 cM – Xbarc11-2D 10560.

PM44

Pm44
Chromosome3AS
VarietiesHombar 10790.
Marker associationsFlanked by SSR markers distally located in chromosome arm 3AS 10790. CURATOR’S NOTE : This gene nane was based on a pre-publication request; the publication cannot be located.

PM45

Pm45
SynonymPm57-6D 10790
Chromosome6DS
VarietiesLine NWG0099 10791.
Varieties (alt.)D5710791.
Marker associationsClose linkages are reported in the draft manuscript.

PM46

Pm46
NotePartial resistance.
Chromosome4DL
Chromosome binDistal to break point 0.56 FL10678.
iRL6077 = Thatcher*6/PI250413 10847,10678.
VarietiesChapingo 48 11070.
Marker associationsPleiotropic or closely linked with Lr67/Yr46/Sr55/Ltn3 and aassociated with Xgwm165-4D and Xgwm192-4DL {10847, 10678}.
cThis multiple disease resistance locus was identified as a hexose transporter most similar to the STP13 family and containing 12 predicted transmenbrane helices 11070.

PM47

Pm47
NoteReccessive.
SynonymPmHYLZ 10912
Chromosome7BS
Chromosome bin7BS1-0.27-1.00.
VarietiesHongyanglazi 10912.
Marker associationsXgpw2119-7B – 7.5 cM – BE606897 – 1.7 cM – Pm47 – 3.6 cM ascob – Xgwm46-7A 10912.

PM48

Pm48
NoteIdentified as Pm2a 11678.
SynonymPm46 10935
Chromosome5DS
Chromosome bin5DS1.
VarietiesTabasco 10935.
Marker associationsXgwm205-5D – 17.6 cM – Pm48 – 1.3 cM – Xmp510(BE498794) – 1.8 cM – Xcfd81-5D 10935.

PM49

Pm49
SynonymMl5323 10937
Chromosome2BS
Chromosome bin2BS-0.84-1.00.
Type varietiesT. dicoccum MG5323 10937.
Marker associationsXcau516-2B – 7.2 cM – Pm49 – 4.1 cM – XCA695634 10937.

PM50

Pm50
Chromosome2AL
Chromosome binC-2AL1-0.85.
VarietiesK2 TRI29907 10942.
Type varietiesT. dicoccum M129 10942.
Marker associationsXgwm294-2A – 2.9 cM – Pm50 10942. K2 is a backcross derivative of German winter wheat cv. Alcedeo with T. dicoccum accession M129 as donor of mildew resistance 10942.

PM51

Pm51
NotePutative Th. ponticum derivative.
SynonymPmCH86 11026
Chromosome2BL
Chromosome bin2BL60.89-1.00.
VarietiesCH7086 11026.
Marker associationsXwmc332-2B – 3.2 cM – Pm51 – 1.5 cM – BQ246670 11026.

PM52

Pm52
SynonymMlLX90 {11028, 11029}
Chromosome2BL
Chromosome bin2BL-0.35-0.50.
VarietiesDH51302 11715; Jimai 22 11714; Liangxing 99 {11028, 11029, 11716}; Shimai 26 11715.
Marker associationsXcfd73-2B – 5.3 cM – Xwmc441-2B – 0.2 cM – XBE604758 – Pm52 – 2.9 cM – Xgwm120-2B 11028; XBE604758 – 5.5 cM – Xics34 – Pm52 – 0.8 cM – Xics30 – 6 additional ics markers – Xgwm120 11029. Located in a 533.6 – 612.9 Mb interval 11716.
PM53 Curator’s note: A publication of this gene could not be located.
Pm53
NoteDerived from Ae. speltoides .
SynonymPmNC-S16 11045
Chromosome5BL
VarietiesNC09BGTS16, PI669386 = Saluda*3/TAU829 11045.
alAe. speltoides TAU829 11045.
Marker associationsXwmc759/Xgwm499-5B/IWA6024 – 0.7 cM – Pm53 – IWA2454 – 5.9 cM – Xgwm408-5B 11045.

PM54

Pm54
SynonymPmA2K 11050
Chromosome6BL
Chromosome bin6BL-0.450-1.00.
VarietiesAGS2000 PI612956 11050.
Marker associationsXgpw2344-6B – 1.00 cM – wPt-9256 – Pm54 – 1.2 cM – Xbarc134-6B 11050.
PM55
Pm55
NoteDerived from Dasypyrum villosum .
SynonymPm5VS {11108, 11109}
5AS (5VS.5AL) 11108. 5DS (5VS.5DL) 11109.
Pm55b
Note5DS (
Chromosome5DL
5VS) 11109.

PM56

Pm56
NoteDerived from S. cereale . 6AS (T
Chromosome6AL
6RS) 11155.

PM57

Pm57
NoteDerived from Ae. searsii . 2BL (T2BS·2BL-2S[S] #1) 11159.
VarietiesLine 89-346, TA510811159; Line 89(5)69, TA5109 11159; Line898(6)88 11728; TA5109 11728.
adBCS+2S[S] #1 TA3581 11159.
cEncodes a tandom kinase with putative kinase-pseudokinse domains followed by a von Willebrand domain and orthologue of Lr9 (88.3% amino acid similarity) 11728. Line 89-346 has a 28% distal Ae. searsii segment and line 89(5)69 has a 33% distal Ae. searsii segment 11159.

PM58

Pm58
NoteDerived from Ae. tauschii .
SynonymPmTA1662 11171
Chromosome2DS
VarietiesU6714-A-011, PI 682090 11320; U6714-B-056, PI 682089 11320.
dvAe. tauschii TA1662 11171.
Marker associationsCosegregation with KASP[TM] markers K-TP331370, KTP338253, K-Tp15990 and K-Tp313873 11171. Cosegregating marker Xkasp68500 developed from AET2Gv20068500 distinguished TA1662 from random common wheat accessions 11749.

PM59

Pm59
SynonymPm181356 11214
Chromosome7AL
Chromosome bin7AL15-0.00-1.00.
VarietiesPI 181356 11214.
Marker associationsXwmc525-7A – 1.8 cM – Xmag1759 – 0.5 cM – Pm18156 – 5.7 cM – Xmag1714 – 20.0 cM – Xcfa2257-7A 11214.

PM61

Pm61
Chromosome4AL
Chromosome bin4AL4-0.8-1.00.
VarietiesXuxusanyuehuang 11290.
Marker associationsXgwm1604A – 0.23 cM – Pm61 – 0.23 cM – Xicsx79 11290. Pm61 was considered to be at a different locus to MlIW30 , a dominant gene in T. dicoccoides accession IW30 and its hexaploid derivative Line 2L6 11289.

PM62

Pm62
Note[ Pm2VL 11321.] Adult-plant resistance. 2BS·2VL#5 11321.
VarietiesNAU1823 11321.
Marker associationsX2L4g9P4/Hae111 11159.

PM63

Pm63
NotePm628024 11331.
Chromosome2BL
Chromosome bin2BL6-0.89-1.00. PI 628024 11331.
VarietiesPI 628024 11331.
Marker associationsXwmc175-2B – 1.7 cM – Xstars419-2B – 0.6 cM – Pm63 – 1.1 cM – Xbcd135.2 – 2B ; 710.3 – 723.4 in the CS RefSeq 1.0 11331.

PM64

Pm64
SynonymPmWE35 11346
Chromosome2BL
Chromosome bin2BL4-0.5-0.89.
VarietiesWE35 11346.
Type varietiesT. dicoccoides G-573-1 11346.
Marker associationsXwmc175-2B – 1.12 cM – Pm64/Xgwm47-2B – 2.18 cM – Xwmc332-2B 11346. Complete repulsion linkage with Yr5 in 644 F3 lines 11346.

PM65

Pm65
SynonymPmXM208 11356
Chromosome2AL
VarietiesXinmai 208 11356.
Marker associationsXhbg327-2A – 4.4 cM – XresPm4/XTaAetPR5 – 0.6 cM – PmXM208 – 1.6 cM – Xbarc122-2A 11356. An allelism test of Pm65 and Pm4a showed a recombination value of 10.3 cM based on the frequency of susceptible F2 plants 11356.
Putative Pm65 allele 11752. Pm351817 11752.

PM66

Pm66
Note4BS (4BL[.] 4S[l] #7S) 11364.
VarietiesTA3465 11364.
alAe. longissima (unknown accession).
Marker associations4S[l] S markers developed in 11364.
PM67
Pm67
Note1D (
Chromosome1DL
1VS#5) 11426.

PM68

Pm68
Chromosome2BS
Chromosome bin2BS-0.84-1.00.
Type varietiesT. durum TRI 1796 11466.
Marker associationsXdw04 (TRITD2Bv1G010030, chr2B:21587671-21591163) – 0.22 cM – PM68 – 0.22 cM – Xdw12 (TRITD2Bv1G010880, chr2B:23374401-23375310) – 3.0 Mb – PM26/Xcau516-2B (TRITD2Bv1G012960, chr2B:26398438-26414596) – 36.8 cM – PM42 11466.

PM69

Pm69
NotePmG3M 11302.
Chromosome6BL
Chromosome bin6BL-0.7-1.00.
VarietiesRuta + Pm69 11627.
itvSvevo + Pm69 11627.
Type varietiesT. dicoccoides G-305-3M {11302, 11627} TD116180 (University of Haifa Wild Cereal Gene Bank), CGN19852 (Netherlands Centre for Genetic Resources) 11541.
Marker associationsXgpw7262-6B – 6.9 cM – PM69 ( PmG3M ) – 4.5 cM – Xedm149-6B 11302.
cPm69 comprises RxN with RanGAP interaction sites, NB-ARC, and LRR domains 11627. GenBank KY825226.1. Collinearity analyses indicated homoeology with SR13_ 11627.
SuPm8
Chromosome1AS
VarietiesWheats with Gli-A1a 1209 including CS; Lists in 1208, {491, 108}.
Pm8 was suppressed when locus Pm3 is transcribed (including Chinese Spring and Thatcher which have no currently detectable Pm3 resistance alleles) 10828.
Pm2Mb
Chromosome2DL
Varieties2DL-2M[b] L translocation lines.
adCS + 2M[b] TA7733 11662.
Marker associationsMapped to a FL 0.49 – 0.667 region containing 19 2Mb-specific markers 11662.
PMTR1 & **PMTR3I.** SECCE6Rv1G0382290 . PmTR1 &
PmTr3
Chromosome6RS
VarietiesTR1 and TR3 were described as stable wheat lines derived from different triticale sources; TR1 had post-seedling (‘age-dependent’) resistance and TR3 had all stage resistance.
cThese genes were shown to be allelic and the different responses were attributed to differences in expression 11686. Both proteins had similarity to Pm12 and Pm21, but differed from Pm8, Pm17 and Pm50 11686.
PmV
NoteT
Chromosome6DL
6VS#4S 11703.
Pm6Sl
NoteDerived from Ae. longissimum . 6A and
Chromosome6B
adCS + 6S[l] #3 TA7548 11597.
VarietiesT27 (Ti6AS.6AL-6S[l] #3-6AL) 11597; R43 (T6BS.6BL-6S[l] #3[l] #3 11597.
alAe. longissimum TA1910 (11597).
Marker associationsMapped to a distal 6S[l] #3 interval of 42.8 Mb flanked by markers Ael58410 and Ael5799 {11597).
Pm6S[l] conferred resistance to 28 of 30 Chinese Bgt isolates 11597.
Pm10V-2
Chromosome5DS
Chromosome bin5DS-0-0.63.
Varieties10V-2 11380.
Marker associationsXbwm255D/Xswgi066-5D – 1.2 cM – Pm10V-2/ several markers – 1.2 cM – Xcfd-5D 11380.
Pm2026
Synonympm2026 10604
Recessive 10604. 5A[m] L 10604.
PmAF7DS
Chromosome7DS
VarietiesArina 11291.
Marker associationsXpsr160-7D – 1.3 cM – Xgwm350a-7D – 4.7 cM – PmAF7DS – 9.9 cM – Xbarc184/Xgwm111-7D 11291.
Three of 61 Israeli Bgt isolates were avirulent: all three isolates were from tetraploid wheat accessions. It is possible that the gene may be present in many common wheat accessions.
PmAS846
Chromosome5BL
Chromosome bin5BL14-0.75-0.76.
VarietiesN9134 10926; N973810927.
Type varietiesT. dicoccoides AS846 10926.
Marker associationsXMAG2498-5B – 1.3 cM – Pm36/XBJ261635 – 1.1 cM – PmAS846 – 1.3 cM – XFCP1-5B 10927.
PmCn17
Note1BS=
Chromosome1BL
Chromosome1RS
VarietiesChuannong 17 10686.
alS. cereale R14 10686.
pmDHT
NoteRecessive.
Chromosome7BL
VarietiesDahongtou S761 11447.
Marker associationsXBE443877/Xwmc526-7B – 0.8 cM – pmDHT – 0.8 cM – Xgwm611/Xwmc581-7B – 0.9 cM – XBF473539/Xgwm577-7B – 0.9 cM – Xgwm577-7B 11447.
PmG3M
Chromosome6BL
Chromosome bin6BL-0.7-1.00.
Type varietiesT. dicoccoides G-305-3M 11302.
Marker associationsXgpw-6B – 13.6 cM – PmG3M – 3.5 cM – Xuhw213-6B – 5.7 cM – Xedm149-6B 11302.
PmJM23
Chromosome5DS
VarietiesJimai 23 11445.
Marker associationsXytu3004 – 0.7 cM – PmJM23/Xytu201/Xbwm21/Xcfd81-5D – 1.8 cM – Xswgi068/Xbwm20 11445.
PmG16
Chromosome7AL
Chromosome bin7AL16 0.86-0.90.
Type varietiesT. dicoccoides G18-16 10886.
Marker associationsXgwm1061/Xgwm344-7A – 1.2 cM – PmG16/wPt-1424/wPt6019 – 2.4 cM – wPt0494/wPt9217/Xwmc809-7A 10886.
PmHNK
Chromosome3BL
VarietiesZhoumai 22 10706.
Marker associationsXgwm108-3BL – 10.3 cM – PmHNK – 3.8 cM – Xwmc291-3BL 10706.
PmHNK54
Chromosome2AL
Chromosome bin2AL1 C-0.85.
VarietiesZheng975410897.
Marker associationsXgwm372-2A – 5.0 cM – PmHNK54 – 6.0 cM – Xgwm312-2A 10897.
PmHo
Chromosome2AL
VarietiesMv Hombar 11176.
Marker associationsXwPt-665330 – 0.3 cM – PmHo – 0.1 cM – XwPt-3114 11176.
PmHHXM
Chromosome4AL
VarietiesHonghuaxiaomai 11565.
Marker associationsLocated in a 1.77 Mb (0.18 cM) region flanked by Xkasp475200 and Xhnu522 11565.
PmKN0816
Chromosome2BL
VarietiesKN0816 11598.
Marker associationsMapped to a region of chromosome carrying Pm6 , Pm33 , Pm51 , Pm64 and PmQ but distinguished from each other by specificity 11598.
PmLS5082
Chromosome2BL
v: LS5082 11629. ma: Located in the interval 710.3 – 711.0 Mb 11629.
PmLX66
NotePmLX66 was allelic with Pm2 11162.
Chromosome5DS
VarietiesLiangxing 66 11162. Identified as Pm2a 11503.
PmLK906
NoteResistance is recessive {10476, 10477}.
Chromosome2AL
VarietiesLankao 90(6)2112 10476; Zhengzhou 975410476.
Marker associationsTacsAetPR5-2A/Pm4 – 3.9 cM – Xgwm265-2A – 3.72 cM – Pm39 – 6.15 cM – Xgdm93-2A {10476, 10477}; TacsAetPR5-2A was converted to an STS marker 10477
PmNJ3946
Chromosome3AS
dvT. monococcum Line NJ3946 11677; PI 191097 = TA2032 11677.
Marker associationsXbarc294-3A – 1.1 cM – PmNJ3946 – 0.8 cM – Xwgrc5153-3A 11677.
PmPBDH
Chromosome4AL
VarietiesPBDH 11647.
Marker associationsMapped to a 3.2 cM interval, 719.1-726.2 Mb (CS RefSeq 1.0) 11647. Cytology failed to detect a putative Agropyrum cristatum segment in PBDH 11647.
PmPs5A
Chromosome2AL
VarietiesAM410205.
tv2T. turgidum subsp. carthlicum pS5 Pm33 10205.
Marker associationsXgwm356-2A - 10.2 cM - PmPS5A ; PmPS5A is located at or near the Pm4 locus10205.
PmQ
NoteRecessive.
VarietiesHongxinmai 11461.
Marker associationsXstars419-2B – 0.6 cM – Xicsq405 2B – 0.8 cM – PmQ – 0.2 cM – XWGGBH913-2B 11461. PmQ is very close to Pm51, Pm63 and Pm64 .
PmXQ-0508
Chromosome2AS
VarietiesLine XQ00508 11734.
Marker associationsLocated to 226.7 kb interrval 11734. All F2 plants in crosses with lines having Pm26 (1,226 plants), Pm42 (1,198 plants) and Pm26 (1,583 plants) were resistant to the test isolate but the response arraye of the lines appeared to be diferente 11734.
PmSGD
NoteRecessive.
Chromosome7BL
VarietiesShangeda 11453.
Marker associationsSNP2-58 – 0.4 cM – PmSGD – 0.8 cM – SNP2-46 11453.
PmTb7A.1
Chromosome7AL
Chromosome bin7AL 18-0.90-1.00.
dvT. boeoticum PAU5088 PmTb7A.2 11130.
Marker associationsMapped to a 4.3 region flanked by wPt4553 and Xcfa2019-7A 11130; Estimated to be 46 cM proximal to Pm1 11130.
PmTb7A.2
Chromosome7AL
dvT. boeoticum PAU5088 PmTb7A.1 11130.
Marker associationsMapped to a 0.8 cM region flanked by MAG1759 and MAG2185b in the region of Pm1 11130.
PmTm4
Chromosome7BL
Chromosome bin7BL10-0.78-1.00.
VarietiesTanmai4 10961.
Marker associationsXgwm611-7B – 7.0 cM – PmTm4 – 14.6 cM – Xest92 – 2.9 cM – Xbarc1073/Xbarc82-7B 10961; XWGGC6892 – 0.6 cM – PmTm4/XWGGC5746 – 0.03 cM – XWGGC891 11452.
PmTx45
NoteRecessive.
Chromosome4BL
Chromosome bin4BL5-0.85-1.00.
VarietiesTian Xuan 45 11374.
Marker associationsAx-110673642 – 3.0 cM – PmTx45 – 2.6 cM – ILP4B01G266900 11374.
PmU
Chromosome7AL
dvUR206 11251.
Marker associationsXwmc273-7A – 2.2 cM – PmU – 3.8 cM – Xpsp3003-7A 11251. PmU was transferred to, and was effective in, common wheat.
PmW14
NotePmW14 is allelic with Pm2 11162.
Chromosome5DS
VarietiesWennong 14 11162. Identified as Pm2a 11503.
PmWE99
NoteDerived from Thinopyrum intermedium .
Chromosome2BS
Chromosome bin2BS-0.84-1.00.
VarietiesWE99.
Marker associationsPmwe99 – 10.4 cM – Xgwm148-2B – 3.1 cM – Xbarc55-2B 11162. GISH failed to detect alien chromatin.
Pmx
NoteReccessive.
Chromosome2AL
Chromosome bin2AL1-0.58-1.00.
VarietiesXiaohongpi 11009.
Marker associationsXhbg327-2A – 0.6 cM – Pmx/Xsts-bcd1231 – 8.9 cM – XresPm4/Xgpw4456-2A 11009. This gene and close markers showed distorted segregation ratios and some discrepancy of markers relative to Pm4 alleles 11009.
PmY39
Note2U(2B) 10367.
suLaizhou 953*4/Am9 (Am9 = Ae. umbellulata Y39/ T. turgidum ssp. carthlicum PS5) 10367.
dvAe. umbellulata Y39 10367.
Marker associationsAssociated with 2U markers Xgwm257, Xgwm296 and Xgwm319 10367.
PmYm66
Chromosome2AL
VarietiesYumai 66 10619.
Marker associationsXKsum193-2A – 2.4 cM & 3.6 cM – PmYm66 10619.
Ml3D32
Chromosome5BL
Chromosome bin5BL 0.59-0.76.
Type varietiesT. dicoccoides I222 10892.
Varieties3D232 10892.
Marker associationsXwmc415-5B – 1.3 cM – Ml3D232 – 3.3 cM – CJ832481 10892; Co-segregation with 8 EST markers including an NBS-LRR analogue 10892.
MlAB10
Chromosome2BL
Chromosome bin2BL6 0.89-1.00.
VarietiesNC97BGTAB10, PI 604036 10873.
Type varietiesT. dicoccoides PI 471746 10873.
Marker associationsXwmc445-2B – 7 cM – MlAB10 10873.
Ml-Ad
VarietiesAdlungs Alemannen 854.
Ml-Br
VarietiesBretonischer Bartweizen 854.
Mld
Chromosome4B
Varieties (alt.)Halle 13471 Pm2 96; H8810/47 Pm2 96; Maris Dove Pm2 96.
Type varietiesT. durum line 96.
Ml-Ga
VarietiesGarnet 854; Many old German cultivars 854.
MlHLT
NotePm24 11414.
Chromosome1DS
VarietiesHulutou 11257.
Marker associationsXgwm-1D – 1.7 cM – Xwggc3026 – 1.5 cM – MlHLT – 2.1 cM – Xwggc3148 – 4.0 cM – Xcfd83-1D 11257.
MlIW72
NoteSee Pm60.
Chromosome7AL
Chromosome binFL 0.86 10545.
Type varietiesT. dicoccoides IW72 10545.
Marker associationsXmag1759-7A – 8.2 cM – MlIW72 – 3.3 cM – Xmag2185-7A – 1.6 cM – Xgwm344-7A 10545.
MlIW30
SynonymMLIW30 11289
Chromosome4AL
Chromosome binLine 2L6 11289.
VarietiesLine 2L6 11289.
Type varietiesT. dicoccoides IW30 11289.
Marker associationsXbarc78-4A – 1.00 cM – XB1g2020.2 – 0.1 cM – MlIw30 – 0.1 cM – XB1g2000.2 – 2.6 cM – Xgwm350-4A 11289.
MlIw170
Chromosome2BS
Chromosome bin2BS3-0.84-1.00 10921.
Type varietiesT. dicoccoides IW170 10921.
Marker associationsXcauG2 – 0.6 cM – MlIw170/Xcfd238-2B – 2.15 cM – XcauG8/BF201235/Xwmc243-2B 10921; Iw1 – 18.77 cM – MlIw170 10921. This gene is located in the same region as Pm26 10921.
MlIW172
Chromosome7AL
Chromosome bin7AL-16-0.86-0.90.
Type varietiesT. dicoccoides IW172 11095.
Marker associationsWGGC4664/WGGC4665/WGGC4668 – 0.44 cM – MlIW172 – 0.7 cM – WGGC4659 11095.
Mljy
NoteRecessive, hemizygous-effective 0339
Chromosome7B
Varieties (alt.)Jieyan 94-1-1 Pm8 0339.
Mlm2033
Chromosome7AL
dvT. monococcum TA2033 10393.
Marker associationsXmag1757/Xmag2185 – 2.7 cM – Mlm2033/Xmag2185 – 1.3 cM – Xgwm344-7A 10393; Xmag1757 – 5.9 cM – Mlm2033/Xmag2185/Xgwm344/Xgwm146-7A – 4.7 cM – Xmag1986 10393; Xmag1757/Xmag1714/Xmag1759Mlm2033 – 0.9 cM – Xmag2185/Xgwm344-7A 10393; Xwgrc353/Xwggc4659 – 0.84 cM – Mlm2033/Xmag8626/Xmag9060/Xmag2185/Xmag5240 – 0.06 cM – Xmag8415/Xmag8220 11190.
Mlm80
Chromosome7AL
dvT. monococcum ssp. aegilopoides M80 10393.
Marker associationsXmag1757/Xmag1759 – 3.6 cM – Mlm80 – 0.7 cM – Xmag2166/Xgwm344-7A 10393; Xwggc4655 – 0.29 cM – Mlm80 – 0.57 cM – Xwgrc253/Xwgrc271 11190. Mlm2033 and Mlm80 appeared to be allelic and their relative locations suggest they are allelic with Pm1 10393.
MlNFS10
Chromosome4AL
Type varietiesT. turgidum ssp. dicoccoides NFS10 11666.
Marker associationsLocated to a 0.3 cM interval of 2.1 Mb (729275816-731365462) in CS refseq 1.0 11666. Considered to be located at a different locus to Pm61 and MlIW30 11666.
MlNCD1
Chromosome7DS
Chromosome bin7DS4-0.61-1.00 11004.
VarietiesNC96BGD1 PI597348 11004; Saluda*3/TA2570 11004.
Marker associationsXgwm635-7D – 5.5 & 8.3 cM – MlNCD1 – 16.2 cM & 13.6 cM – Xgpw328-7D 11004.
mlRd30
NoteReccesive
Chromosome7AL
VarietiesRD30 10175; TA2682c 10175.
Marker associationsXgwm344-7A – 1.8 cM – mlRD30 – 2.3 cM – Xksuh9-7A 10175.
TA2682c carries a second dominant gene located in chromosome 1A 10175.
Mlre
Chromosome6AL
Varieties (alt.)RE714 Pm4b {0142, 1220}.
Type varietiesT. dicoccum 119 1220. Mlre showed a residual effect on the quantitative expression of APR in the presence of B. graminis pathotypes considered virulent for Mlre in standard seedling tests 0016. In addition to Mlre , a QTL for resistance effective at the seedling stage was associated with microsatellite marker Xgwm174-5D 0142.
Mlsy
NoteRecessive, hemizygous-effective 0339
Chromosome7B
VarietiesSiyan 94-2-1 0339.
MlUM15
NoteDerived from Aegilops neglecta.
Chromosome7AL
Chromosome bin7AL15-0.99-1.00.
VarietiesNC09BGTUM15 11216.
alAe. neglecta TTCC 223 11216.
Marker associationsXwmc525-7A / IWA8057 – 0.7 cM – Xcfa2257-7A – 0.4 cM – MlUM15 – 0.8 cM – Xcfa2240-7A – 2.8 cM – Xmag2185 – 3.4 cM – IWA2929 5 – 4.0 cM – IWA4434 11216.
MlWE74
Chromosome2BS
VarietiesWE74 11589.
Type varietiesT. dicoccoides G-748-M 11589.
Marker associationsMapped to a 799.9 kb region corresponding to physical region 25.48-26.28 in CHr2Zavitan v2.0 (26.5927.01 in IWGSC RefSeq v1.0) 11589. The relationship to Pm26 and MlIW170_ was not established 11589.
Mlxbd
NoteRecessive and hemizygous-effective 0258
Chromosome7B
VarietiesXiaobaidong 0258.
MlTd1055
Type varietiesT. dicoccoides 1055 10029.
MlWE74
Chromosome2BS
VarietiesWE74 = YD1817/G-748-M//7*ND01 11665.
Type varietiesT. dicoccoides G-748-M 11665.
Marker associationsCo-segregated with WGGBD425 11665.Located in the same region as Pm26, MlIW170 , and MlWE74 11665.
Mlzec1
SynonymMLZec 10127
Chromosome2BL
VarietiesZecoi 1 = Ralle*3/ T. dicoccoides Mo49 10127.
Type varietiesT. dicoccoides Mo49 10127.
Marker associationsDistally located in chromosome 2BL 10127; Xwmc356-2B – 2.0 cM – PmZec1 10127.
Ml92145E8-9
Chromosome2AL
Chromosome bin2AL1-0-0.85.
VarietiesLine 92145E8-9 11436.
Marker associationsXwmc181-2A – 9.3 cM – Xsdauk682-2A – 2.8 cM – Ml92145E8-9 – 0.8 cM – Xsdauk-2A – 18.7 cM – Xgwm356-2 11436.
Unnnamed resistance gene 11612. WTK4 11612. 7D 11612.
QPm.sfr-1A
Chromosome1A
VarietiesForno/ T. spelta var. Oberkulmer mapping population; the resistance was contributed by Oberkulmer 0051.
Marker associationsAssociated with Xpsr1201-1A and Xpsr941-1A 0051.
QPm.sfr-1B
Chromosome1B
VarietiesForno/ T. spelta var. Oberkulmer mapping population; the resistance was contributed by Forno 0051.
Marker associationsAssociated with Xsfr3(LRR)-1B and Xpsr593-1B 0051.
QPm.sfr-1D
Chromosome1D
VarietiesForno/ T. spelta var. Oberkulmer mapping population; the resistance was contributed by Oberkulmer 0051.
Marker associationsAssociated with Xpsr168-1D and Xglk558-1D 0051.
QPm.sfr-2A
Chromosome2A
VarietiesForno/ T. spelta var. Oberkulmer mapping population; the resistance was contributed by Oberkulmer 0051.
Marker associationsAssociated with Xpsr380-2A and Xglk293-2A 0051.
QPm.sfr-2D
Chromosome2D
VarietiesForno/ T. spelta var. Oberkulmer mapping population; the resistance was contributed by Oberkulmer0051.
Marker associationsAssociated with Xpsr932-2D and Xpsr331-2D 0051.
QPm.sfr-3A
Chromosome3A
VarietiesForno/ T. spelta var. Oberkulmer mapping population; the resistance was contributed by Forno0051.
Marker associationsAssociated with Xpsr598-3A and Xpsr570-3A 0051.
QPm.sfr-3D
Chromosome3D
VarietiesForno/ T. spelta var. Oberkulmer mapping population; the resistance was contributed by Oberkulmer 0051.
Marker associationsAssociated with Xpsr1196-3D and Xsfr2(Lrk10)-3D 0051.
QPm.sfr-4A.1
Chromosome4A
VarietiesForno/ T. spelta var. Oberkulmer mapping population; the resistance was contributed by Forno 0051.
Marker associationsAssociated with Xgwm111-4A and Xpsr9344A 0051.
QPm.sfr-4A.2
Chromosome4A
VarietiesForno/ T. spelta var. Oberkulmer mapping population; the resistance was contributed by Forno 0051.
Marker associationsAssociated with Xmwg710-4A and Xglk128-4A 0051.
QPm.sfr-4B
Chromosome4B
VarietiesForno/ T. spelta var. Oberkulmer mapping population; the resistance was contributed by Forno 0051.
Marker associationsAssociated with Xpsr593-4B and Xpsr1112-4B 0051.
QPm.sfr-4D
Chromosome4D
VarietiesForno/ T. spelta var. Oberkulmer mapping population; the resistance was contributed by Forno 0051.
Marker associationsAssociated with Xglk302-4D and Xpsr1101-4D 0051.
QPm.sfr-5A.1
Chromosome5A
VarietiesForno/ T. spelta var. Oberkulmer mapping population; the resistance was contributed by Oberkulmer 0051.
Marker associationsAssociated with Xpsr644-5A and Xpsr945-5A 0051.
QPm.sfr-5A.2
Chromosome5A
VarietiesForno/ T. spelta var. Oberkulmer mapping population; the resistance was contributed by Oberkulmer 0051.
Marker associationsAssociated with Xpsr1194-5A and Xpsr918-5A 0051.
QPm.sfr-5B
Chromosome5B
VarietiesForno/ T. spelta var. Oberkulmer mapping population; the resistance was contributed by Oberkulmer 0051.
Marker associationsAssociated with Xpsr580-5B and Xpsr143-5B 0051.
QPm.sfr-6B
Chromosome6B
VarietiesForno/ T. spelta var. Oberkulmer mapping population; the resistance was contributed by Forno 0051.
Marker associationsAssociated with Xpsr167-6B and Xpsr964-6B 0051.
QPm.sfr-7B.1
Chromosome7B
VarietiesForno/ T. spelta var. Oberkulmer mapping population; the resistance was contributed by Forno 0051.
Marker associationsAssociated with Xpsr593-7B and Xpsr129-7B 0051.
QPm.sfr-7B.2
NoteThis QTL corresponds to Pm5 0051.
Chromosome7B
VarietiesForno/ T. spelta var. Oberkulmer mapping population; the resistance was contributed by Forno0051.
Marker associationsAssociated with Xglk750-7B and Xmwg710-7B 0051.
QPm.ipk-2B
Chromosome2BS
VarietiesOpata/W-7984 (ITMI) RI mapping population 2055; Resistance was contributed by Opata 0255.
Marker associationsAssociated with Xcdo405-2B and Xmwg950-2B 0255.
QPm.ipk-4B
Chromosome4B
VarietiesOpata/W-7984 (ITMI) RI mapping population 0255; Resistance was contributed by W-7984 0255.
Marker associationsAssociated with Xcdo795-4B and Xbcd1262-4B 0255.
QPm.ipk-7D
Chromosome7DS
VarietiesOpata/W-7984 (ITMI) RI mapping population 0255; Resistance was contributed by Opata 0255.
Marker associationsAssociated with Xwg834-7D and Xbcd1872-7D 0255.
QPm-tut-4A
Chromosome4AL
VarietiesDT4AL-TM Line 8.1 11154.
Type varietiesT. militinae (AAGG) 11154. The 7G segment carrying this resistance likely replaces most of the 7BS segment known to be part of chromosome 4A 11154.
PmSE5785
NoteRecessive
Chromosome2DL
VarietiesSE5785, Snipe/Yav79//Dack/Teal/3/ Ae. squarrosa 877 11084; NO7728-1 11084; NO7728-211084.
Marker associationsXbarc59-2D – 3.6 cM – PmSe5785 – 4.6 cM – Xwmc817-2 11084. Bainong 64(R) / Jingshuan 16(S). DH lines: Four QTL from Bainong 64: Qpm.caas.1A .
Xbarc148-1AXgwmc550-1A interval. R[2] =0.074-0.099; QPm.caas-4DL proximal to Xwmc331-4D . R[2] =0.15-0.23; QPm.caas-6BS , proximal to Xbarc79-6BS , R[2] =0.09-0.13; and QPm.caas-7AL , proximal to Xbarc174-7AL , R[2] =0.067-0.071 10680. Additional temporarily named genes and QTL are listed in 11655.

3.6. Reaction to Cephus spp. See also Stem solidness.⌂ Home

Pest: Wheat stem sawfly. North American species C. cinctus ; European species C. pygmeus . Resistance to wheat stem sawfly is associated with solid stem (see also: Stem solidness). Tetraploid wheat

Qsf.spa-3B

3.7. Reaction to Cochliobolus sativus Ito & Kurib.⌂ Home

Disease: Cochliobolus root rot. CRR

Crr
NoteRecessive.
Chromosome5BL
VarietiesApex 764; Cadet 765.

3.8. Reaction to Colletotrichum cereale⌂ Home

RCC1

Rcc1
Chromosome5AL
VarietiesChinese Spring 10939; Norin 4 10939; Shinchunaga 10939.
Marker associationsXbarc165-5A – 1.2 cM – Rcc1 – 12.8 cM; Xgwm671-5A – 0.7 cM – Xwmc415-5A 10939.
rcc1
VarietiesHope 10939.
Susceptibility to this non-pathogen of common wheat is rare, with only one susceptible genotype being documented. A few susceptible tetraploid genotypes were identified 10939.

3.9. Reaction to Diuraphis noxia (Mordvilko)⌂ Home

Insect pest: Russian aphid, Russian wheat aphid.

DN1

Dn1
Chromosome7DS
Chromosome7D
Chromosome bin7DS-0.36-0.73 11225.
iBetta-Dn1:PI 634768 {0211, 0004, 10277}; Caledon 0004; Gariep 0004; Karee-Dn1 0211; Limpopo-Dn1 0004; TugelaDn1:PI591932 {0211, 0004, 10277}.
VarietiesPI 137739 286.
Marker associationsXgwm111-7D 210 – 3.20 +/- 0.20 cM – Dn1 0211.
VIGS silencing of 5AL-B4 on chromosome 5A compromised resistance conferred by Dn1 suggesting a decoy role 11333. Tests of allelism indicated that Dn1, Dn2, Dn5, Dn6, and Dnx and four uncharacterized lines were identical or closely linked 11225.

DN2

Dn2
Chromosome7DL
Chromosome7DS
iBetta-Dn2:PI 634769 286, 10277; Karee-Dn2:PI 663774 286, 10277; Tugela-Dn2: PI 634772 286 ,10277.
VarietiesPI 262660 286,863.
Marker associationsXksuA1-7D – 9.8 cM – Dn2 863; Myburg et al. 9968 identified two SCAR markers that mapped 3.3 cM proximal to Dn2 9968; Xgwm111-7D 200 – 3.05 +/- 0.18 cM – Dn2 286; XksuA1-7D – 9.9 cM – Dn2 – 2.8 cM – Xgwm437-7D 0353.
According to Saidi & Quick 1250, Dn1 and Dn2 are probably allelic. Reference stocks with each gene showed allelism with a gene in PI 262605.

DN3

Dn3
NoteRecessive.
VarietiesAe. tauschii SQ24/ T. turgidum TD651086.
dvAe. tauschii SQ24 1086.

DN4

Dn4
Note1DL 863,
Chromosome1DS
iYumar 10397.
VarietiesAnkor 10397; CORWAI 260; CI 2401 260; Halt 0209; PI 151918 260; PI 372129 1250; Prairie Red 10397.
Marker associationsXabc1561D – 11.6 cM – Dn4 863; Xgwm106-1D – 7.4 cM – Dn4 – 12.9 cM – Xgwm337-1D 0352; Xgwm1061D – 5.9 cM – Dn4 – 9.2 cM – Xgwm337-1D 10128.
Dn4 and an uncharacterized gene in PI 151918 were allelic or tightly linked 11225.

DN5

Dn5
Chromosome7D
Chromosome7DS
7DL 287, 10396, 10310.

DN6

Dn6
Chromosome7D
Chromosome bin2AL1-0.85-1.00.
VarietiesCI 6501 260; PI 243781 1249,1250.
Marker associationsDn6 – 3.0 cM – Xgwm111 352. Xgwm44-7D – 11.6 cM – Xgwm111-7D – 3.0 cM – Dn6 11225.

DN7

Dn7
NoteDerived from S. secale cv. Turkey 77 9918
SynonymDn2414 10478
Chromosome1R
1B = 1BL.1RS 9918.

DN9

Dn9
Chromosome1DL
iBetta-DN9:PI 634770 10277.
Varieties (alt.)PI 294994 Dn5Dn8 286.
Marker associationsXgwm642-7D 180 – less than 3.20 cM – Dn9 286.
Dn10
Chromosome bin7DL-0.1-077.
VarietiesPI 682675 11211.
Marker associationsXcfd14 -7D – 2.3 cM – Xgwm437-7D – 9 cM – Dn10 – 29.1 cM – Xwmc488-7D 11211; Xcfd14 -7D – 3.6 cM – Xgwm437-7D – 11.3 cM – Dn10 – 35 cM – Xwmc488-7D 11211; Dn626580 – 2.0 cM – Dn2401 – 8.4 cM – Dn624151 11211.

Temporary designations

Dnx
Chromosome7DS
VarietiesPI 220127 286.
Marker associationsXgwm111-7D 210 – 1.52 +/- 0.15 cM – Dnx 286. Dnx was considered to be located at a locus different from Dn1, Dn2 or Dn5 286, which were likely to be identical or allelic.
Dn1881
Chromosome7BS
Type varietiesLine 1881 10145.
Marker associationsXgwm46-7BS – 10.1 cM – Dn1881 – 12.8 cM – Xgwm333-7BL 10145.
Dn2401
Chromosome7DS
VarietiesCI2401, PI97812 11078.
Chromosome bin7DS-0.37-0.61 11211.
Marker associationsXbarc214-7D – 1.1 cM – Dn2401 – 1.8 cM – Xgwm473 -7D 11078.
Dn100695
Note7DS M19026}.
VarietiesIG 100695 11226.
Marker associationsXgwm44-7D – 13 cM – Xcfd14 - 7D – 15.7 cM – Dn100695 .
Dn626580
Chromosome7DS
VarietiesPI 626580 10981.
Marker associationsDn626580 – 1.8 cM – Xbarc214-7D – 3.2 cM – Xgwm473-7D – 3.2 cM – Xgwm473-7D 10981.
QTL QTLs for antixenosis were associated with Xpsr687-7D (7DS) and Xgwm437-7D (7DL) in CS/CS (Synthetic 7D) 10136. Separate antibiotic effects were demonstrated for the same chromosome 10136. A QTL, QDn.unlp.6A , for antixenosis was associated with Xgwm1393-6AL and Xgwm1150-6AL in a CS/CS(Synthetic 6A) DH population 10216.

3.10. Reaction to Eurygaster Integriceps⌂ Home

Sunn pest

EI1

Ei1
Chromosome4BS
Chromosome bin4BS4-C-0.27.
Marker associationsIWB73001Ei1/BS00022785IWB9610 11201.

3.11. Reaction to Fusarium spp.⌂ Home

FHB1

Fhb1
SynonymQFhs.ndsu-3BS 9925, 175
Chromosome3BS
iHC374/3*98B69-147 10214; Sumai 3*5/Thatcher 10214.
VarietiesHC-147-126 10444; Rollag 11071.
Varieties (alt.)Alsen Fhb5 {11071, 11237}; BW278 Fhb2 10225; Carberry Fhb5 {11237 }; ND744 Fhb5 11237; ND3085 Fhb5 11237; Sumai 5 Fhb2 Fhb5 {10314, 11237}.
Marker associationsXSTS3B-80 – 0.2 cM – Fhb1 – 1.1 cM – XSTS3B-142 10214; Placed in a 1.2 cM interval flanked by XSTS3B-189 and XSTS3B-206 10403; Xgwm389- 3B – 3.0 cM – Sr2/csr2 – 0.4 cM – Xgwm389- 3B – 2.0 cM – Fhb1/UMN10/ UMNv2 (coupling) 11210. Xgwm493-3B and Xgwm533-3B were confirmed as useful markers 11237.
cA pore-forming toxin-like gene product encodes a chimeric lectin with two agglutinin domains and an ETX/MTXZ toxin domain 11205.
The relationship of Fhb1 to Fhs1 or Fhsb2 1096 is unknown. Lines combining Fhb1 and Sr2 are reported in 11170; Fhb1 is located about 2 cM proximal to Sr2 . SYN1 / Ocoroni DH population: three QTL from SYN1 were identified, QFhs.cim-2D (PVE 25%), QFhs.cim-7A (PVE 4.7%) and Qfhs.cim-7A (PVE 4.2%) 11165. A marker study found that 14 of 66 wheats with putative FHB resistance shared markers indicative of the 3BS QTL in Ning 7840, Sumai 3, Wangshuibai and possibly Wuhan 3, plus Japanese landraces Shinchunaga and Shirasu No 1 10115. The original source may be the landrace 'Taiwan Wheat' rather than Funo 10115.

FHB2

Fhb2
Chromosome6BS
VarietiespbE8510444.
Varieties (alt.)BW278 Fhb1 10225; Sumai 3 Fhb1 10225.
Marker associationsXgwm133-6B – 4 cM – Fhb2 – 2 cM – Xgwm644-6B 10225. The relationship of Fhb2 to Fhs1 or Fhs2 1096 is unknown.

FHB3

Fhb3
Note7DS = T
Chromosome7AL
7Lr#1S10529.

FHB4

Fhb4
SynonymQfhi.nau-4B 10282
Chromosome4BL
Chromosome bin4BL5-0.86-1.00.
iMianyang 99323*4/Nanda 2419/Wangshibai 10885.
Varieties (alt.)Wangshuibai Fhb5 10884.
Marker associationsLocated in a 1.7 cM segment flanked by Xhbg226-4B and Xgwm149/Xmag4580-4B 10883.
Although plants with Fhb-4 were taller than the recurrent parent, the height difference was not associated with the Rht-B1 locus 10885. Type I resistance (% infected plants) in this cross was attributed to 10 chromosome regions among which Qfhi.nau-4B ( Xwmc349-4BXgwm149-4B - r[2 ] = 0.75), XFhi.nau-5A (Xwmc96-5AXgwm304-5A - R[2 ] = 0.27) and Qfhi.nau-5B (Xgwm408-5BXbarc140-5B ) from Wangshuibai were detected in at least 3 of 4 years 10282. A significant additive effect of QTL on 6D and 2A was also observed 10282.

FHB5

Fhb5
SynonymQfhi.nau-5A {10282 }; Qfhs.ifa-5A 10076
Chromosome5AS
Chromosome binC-5AS3-0.75.
iMianyan 99-323 and PH691 backcross derivatives selected for Qfhi.nau-5A 10896.
Varieties (alt.)Alsen Fhb1 11237; Carberry Fhb1 11237; ND744 Fhb1 11237; ND3085 Fhb1 11237; Sumai 5 Fhb1 Fhb2 {10314, 11237}; Wangshuibai Fh4b 10896.
Marker associationsMapped to a 0.3 cM interval between Xbarc117/Xbarc358/Xgwm293/Xgwm304-5A and Xgwm415-5A 10896.
Closely linked in coupling with Qflw.nau-5A for narrow leaf width, but recombination is reported in 11041. According to 11487 Fhb5 might be the same as Qfhs.ifa-5Ac but the issue remained ambivalent.

FHB6

Fhb6
NoteDerived from Elymus tsukushiensis syn. Roegneria kamoji
Chromosome1AS
T1AL.1AS-1E[ts] #1S 11048

FHB7

Fhb7
NoteDerived from Thinopyrum ponticum
SynonymFhbLoP 11118
T7DS.7D1-7e12L 11060

FHB8

Fhb8
Chromosome7D
iWangshuibai/4*PH691 7D-NIL1 11676; Wangshuibai/4*PH691 7DNIL2 11676.
Varieties (alt.)Wangshuibai Fhb1 Fhb2 Fhb4 Fhb5 11676.
Marker associationsXwgrb1500 (93.9 Mb, RefSeq 1.0) – Fbhb8/Xwgrb1587Xwgrb1559 (96.5 Mb) 11676.

FHB9

Fhb9
NoteQFhb-2DL 11719.
Chromosome2DL
VarietiesShi4185 / Shijiazhuang8 RIL92 (11727}; Ji5625 / Wheaton NILs 11719.
Varieties (alt.)Shi4185 + additional QTL in chr. 4A, 3D and 5D 11727; Ji5625 11719.
Marker associationsLocated in an 8.0 Mb (2.21 cM) region (KASP-525 KAS-12056, 525.9 – 533.8, Mb, CS RefSeq 2.1) 11727; 524.9 – 531.0 Mb 11719.

Other names

Fhs1
VarietiesLine A 1096.
Varieties (alt.)Ning 7840 Fhs2 1096.
Fhs2
VarietiesLine B 1096.
Varieties (alt.)Ning 7840 Fhs1 1096. A major QTL was associated with several linked AFLP markers tentatively located in chromosome 7BL of Ning 7840 0005.
QTL QTLs for resistance to Fusarium graminearum detected in the cross Renan/Recital 10069. All resistance alleles, except QFhs.inra-3A , were contributed by Renan. LOD scores and percent of variation explained by the QT (R[2] ) are average of three years of field tests.
QFhs.inra-2A
Marker associationsAssociated with Xgwm382c-2A (LOD=6.3, R[2] =14.4%).
QFhs.inra-2B
Marker associationsAssociated with Xgwm374-2B (LOD=7.6, R[2] =12%).
QFhs.inra-3A
Marker associationsAssociated with Xbcd372-3A (LOD=3.7, R[2] =6.2%).
QFhs.inra-3B
Marker associationsAssociated with Xgwm383b-3B (LOD=5.4, R[2] =10.5%).
QFhs.inra-5A.1
Marker associationsAssociated with Xpsr170a-5A (LOD=3.8, R[2] =5%).
QFhs.inra-5A.2
Marker associationsAssociated with Xgwm639b-5A 8LOD=6.6, R[2] =14%).
QFhs.inra-5A.3
Marker associationsAssociated with B1 (LOD=6.3, R[2] =8.5%).
QFhs.inra-5D
Marker associationsAssociated with Xcfd29-5D (LOD=4.4, R[2] =7%).
QFhs.inra-6D
Marker associationsAssociated with Xcfd42-6D (LOD=2.7, R[2] =6.6%).
QFhs.ndsu-2A
Chromosome2AL
VarietiesSumai 3/Stoa RI mapping population; the QTL was contributed by Stoa 9925.
Marker associationsAssociation with RFLP XksuH16-2A (LOD >3) 9925,175.
QFhs.ndsu-3AS
Chromosome3AS
Type varietiesT. turgidum var. dicoccoides. Recombinant substitution lines LDN and LDN(Dic-3A). The resistant allele was contributed by T. dicoccoides 372.
Marker associationsAssociated with Xgwm2-3A (explained 37% of the phenotypic variation)372; QFhs.ndsu-3AS was placed within a 11.5 cM region flanked by TRAP marker loci Xfcp401-3A and Xfcp397.2-3A 10482; This gene was transferred to durum cultivars using the closely linked marker Xgwm2-3A 11367. This gene is unlikely to be a homoeologue of Qfhs.ndsu-3BS = Fhb1 10482.
QFhs.ndsu-3B
Chromosome3BS
VarietiesSumai 3/Stoa RI mapping population; the QTL was contributed by Sumai 3 9925,0175.
Marker associationsAssociation with Xbcd907-3B.2 (LOD >3) 9925 and microsatellite markers Xgwm1533-3B and Xgwm493-3B 0175; QFhs.ndsu-3B from Sumai 3 was associated with microsatellite loci Xgwm533-3B and Xgwm274-3B in certain Sumai 3 derivatives 10062. In Ning 894037 the QTL has the same location and similar SSR bands to Sumai 3 10085. STS marker SRST.3B1 was mapped between Xgwm533-3B and Xgwm389-3B and associated with QFhs.ndsu-3B 10072. QFhs.ndsu.3B was associated with markers Xgwm533-3B, Xbard133-3B, Xbarc147-3B and Xgwm493-3B 10073.
This QTL explained 42% of the variation in Sumai 3/Stoa 0175. Two additional QTL for resistance to Fusarium graminearum were identified in the croSumai3/Stoa 0175. The QTL on 4BS was associated with Xwg909-4B and the QTL on 6BS was associated with Xbarc101-6B and Xbcd1383-6B 0175. The QTL associated with markers Xgwm493-3B/Xgwm533-3B (explaining 24.8 % of the variation), and Xbarc101-6B/Xbcd1383-6B were also identified in a RIL population from the cross ND2603/Butte 86 0175. In addition, one QTL on chromosome 3AL associated with Xbcd941-3A and one on chromosome 6AS associated with XksuH4-6A were identified in RILs from the cross ND2603/Butte 86 0175. Remus / CM-82036 (a Sumai 3 derivative): DH population: Resistance QTL on chromosome 3BS associated with Xgwm493-3B and Xgwm533-3B 0240. Additional QTL in this cross were detected on chromosome 5A, associated with Xgwm293-5A and Xgwm304-5A , and possibly on 1B, associated with Glu-B1 0240. Two major genes with additive effects were reported in crosses between Sumai 3 (resistant) and two susceptible cultivars 0174. One of the genes was assigned to 5AL based on linkage to the dominant awn suppressor B1 (RF 15.1-21.4%). Alve (S) / Line 685 R: DH population: QTL on chromosomes 4D ( Rht-D1 ), 3BS, 5A and 2BL 10972. Two resistance QTL were needed to counteract the negative effect of the Rht-D1b semi-dwarfing allele 10972. Arina (R) / Forno (S): Three QTLs, QFhs.fal-6DL (R[2] =22%), QFhs.fal-5BL.1 (in Forno, R[2] =14%) and QFhs.fal.4AL (R[2] =10%) and 5 minor QTLs in 2AL, 3AL, 3BL, 3DS and 5DL were detected 10172. Arina / Riband DH lines: QTL affecting ADUPC were identified in 1BL(2), 2B, 4DS, 6BL and 7AL (Arina), and 7AL and 7BL (Riband). The most effective was the 4DS QTL that appeared to be an effect of Rht-D1a rather than height per se 10464. Baishanyuehuang (R) / Jagger (S): RIL population: Four genes/QTLs derived from the resistant parent included Fhd1 (R[2] =0.16), Qfhb.hwwg-3BS c (R[2] =0.09), Qfhb.hwwg-3A (R[2] =0.05-0.08) and Qfhd.hwwg-5A (R[2] =0.05 in one trial) 10950. Cansas (moderately resistant) / Ritmo (susceptible): Map based analysis across environments revealed seven QTL, QFhs.whs-1BS (1RS), QFhs.whs-3B (not Fhb1 ), QFhs.whs-3DL, QFhs.whs-5BL '(renamed Qfhs.lfl-1BL in 10768)' , QFhs.whs-7AL and QFhs.whs-7BL (cumultatively, R[2] = 0.56). The chromosome 1D gene was primarily involved in resistance to fungal penetration and the others in resistance to spread 10503. There were significant correlations of FHB response with height and heading date 10503. Qfhs.lfl-1BL was verified in F4:7 lines and detected in Biscay, History and Pirat 10768. The renamed Qfhs.lfl-1BL reduced FHB severity by 42% relative to lines lacking it 10698. This gene was also present in Biscay, History and Pirat 10698. CS / CS(Sumai 3 7A): QFhb7AC , nearest marker Xwmc17-7A , explained 22% of phenotypic variance for Type II and 24% of phenotypic variance for Type III resistance 10798. Chris / Frontana: In a reciprocal backcross analysis of Chris monosomics/Frontana, Frontana chromosomes 3A, 6A and 4D reduced visibly diseased kernels, kernel weight and DON content, whereas Frontana chromosomes 2A, 2B, 4B and 7A increased the same traits 10398. Further study of the 3A, 6A and 4D reciprocal substitution lines indicated that chromosome 3A of Frontana had the largest effect on incidence, severity, spread and kernel damage, 4D less so and 6A possibly not at all 10900. DH181(R)(Sumai 3 / HY 386 Seln.): QTL identified in 2DS, 3AS, 3BS, 3B Cent. region, 4DL, 5AS, 6BS 10213. Dream(R) / Lynx(S): RIL population: Following inoculation with F. culmorum 4 QTL for AUDPC were identified on chromosomes 6AL (R[2] =19%), 1B (12%), 2BL (11%) and 7BS (21%). The resistance allele in 1B came from Lynx and was associated with T1BL.1RS 10260. Dream*4 / Lynx lines were developed by selection of QTL on chromosomes 6AL, 7BS and 2BL. Lines carrying QFhs.lfl-6AL and QFhs.lfl-7BS were more resistant than lines lacking them; the 2BL QTL effect was not verified 10470. Chokwang (R) / Clark (S): Qfhb.ksu-5DL.1 associated with Xbarc239-5D (R[2] =0.24) 10276, Qfhb.ksu4BL.1 associated with Xbarc1096-4B (R[2] =0.13) 10276, and Qfhs.ksu-3BS.1 marginally associated with the region of Fhb1 (R[2] =0.1) 10276.Ernie (Res) / MO94-317 (Sus): 243 F8 RIL population. Four QTLs from Ernie detected as follows: Qfhs.umc-2B , linked to Xgwm278-2BS , R[2] = 0.04 10456; Qfhs.umc-3B , linked to Xgwm285-3BS , R[2] = 0.13 10456; Qfhs.umc-4B , linked to Xgwm495-4BL , R[2] = 0.09 10456. Qfhs.umc-5A , linked to Xgwm165-5A , R[2] = 0.17 10456. Evidence was provided to suggest the QTL acted additively 10456. Frontana (R) / Remus (S): Major QTLs in chromosomes 3AL ( Xgwm270-3ALXdupw227-3A region) and 5A ( Xgwm129-5AXbarc-5A region) accounted for 16% and 9% of the phenotypic variation (mainly type 1 resistance) over 3 years 10174. Frontana (MR) / Seri82 (S): F3 and F3:5 populations: QTLs were located in chromosomes 1BL (R[2] =7.9%), flanked by AFLP markers, 3AL (R[2] =7.7%), flanked by Xgwm720-3A and Xgwm121-3A , and 7AS (R[2] =7.6%), flanked by anAFLP and Xgwm233-7A 10349. G16-92 (R) / Hussar (S): Two QTL for resistance to F. culmorum were identified on chromosome 1A (resistance from Hussar) (R[2] = 0.01) and 2B (resistance from G16-92) (R[2] = 0.14) 10588. Glenn (R) / MN00261-4 (S): RIL population: three of 15 QTL for FHB response and heading date were stable and explained >10% of the phenotypic variation; these were located on chromosome arms 5BL, 6BS (possibly Fhb2 ) and 7AS 11568. Grandin (S) / PI277012 (I): DH population: Two QTLs, Qfhb.rwg-5A.1 on 5AS (R[2] 0.06-0.2) and Qfhb.rwg-5A.2 on 5AL (R[2] =0.12-0.2) conferred type I and II resistance and reduced DON content 0147. The new QTL on 5AL was closely but not completely linked with gene q which is present in PI277012 10860. Hobbit Sib / T. macha
Qfhs.crc-2BL
Type varietiesStrongfield 10445.
Marker associationsSpanning 16 cM, this QTL peaking on Xgwm552B explained 23% of the phenotypic variation 10445.
Qfhs.crc-6BS
Type varietiesT. turgidum var. carthlicum cv. Blackbird10445.
Marker associationsSpanning 23 cM and peaking on Xwmc397 this QTL accounted for 23% of the phenotypic variation 10445.
Qfhs.ifa-5A
NoteAssociated mainly with resistance to fungal penetration 10073.
Chromosome5A
VarietiesRemus/CM-82036 10076.
Marker associationsAssociated with markers Xgwm293-5A, Xgwm304-5A, Xgwm1057-5A, Xbarc117-5A, Xbarc186-5A, Xbarc100-5A and Xbarc40-5A 10073. Fine mapping divided this QTL into two components, Qfhs.ifa-5Ac located in the centromere region at 245.9 Mbp and a less effective Qfhs.ifa 5AS located at 290 Mbp. Both QTL were significantly associated with higher anther extrusion and plant height 11487.
Qfhs.fcu-7AL
sutvLDN-DIC 7A 10401.
Type varietiesT. turgidum var. dicoccoides PI 78742 10401.
Marker associationsLocated in an interval 39.6 cM thie QTL accounted for 19% of the phenotypic variation in a RIL population of Langdon/LDN-DIC 7A; nearest marker Xbarc121-7AL 10401.
Qfhs.ndsu-3AS
sutvLDN-DIC3A 10402.
Type varietiesT. dicoccoides 10402.
Marker associationsLocated in an interval spanning 29.3 cM this QTL accounted for 37% of the phenotypic variation; peak marker, Xgwm2-3A 10402.
QFhs.pur-2D
VarietiesAlondra10085.
Marker associationsLocated on 2DS between SSR markers Xgwm2962D and Xgwm261-2D 10085.
QFhs.pur-7El
Chromosome7DS
7DL-7el2 10489. 7el210489.

3.12. Reaction to Heterodera avenae Woll.., H. filipjeva (Madzhidov) Stelter⌂ Home

Cereal root eelworm; cereal cyst nematode.

CRE1

Cre1
SynonymCre 1388
Chromosome2BL
Chromosome2B
iAP = Prins[*] 8/AUS10894 1579.
VarietiesAUS 10894 1056; Beulah 10013; Chara 10163; Goldmark 10013; Goroke 10013; Kellalac 10013; Loros CI 3779 10013; Mira 10163; Mitre 10163; Ouyen 10013; RE8670 10013; Silverstar 10013; VI252 10013; VI727 10013.
Marker associationsXglk605-2B - 7.3 cM - Cre1 - 8.4 cM - Xcdo588-2B/Xabc451-2B 1579; A PCR-based assay was developed from Xglk605-2B 1580; Co-
segregation with Xcsl107-2B . Four of 6 land varieties possessed Xcsl107-2B . A variant haplotype of Xcsl107-2B was present in AUS4930 10013; Xcdo36-2B – 7.5 cM – Xbcd1231-2B/XAtPPr5/Xcsl1072B/Cre1 10013.

CRE2

Cre2
NoteDerived from Ae. ventricosa 10 238, 9991. 6M[v ] 9991.
Varieties (alt.)H-93-8 Cre6 238. Although H-93-8 is a double M[v] (5A), 7M[v] (7D) substitution line, Cre2 was presumed to be located in a separate undetected translocated 6M[v] segment 9991.

CRE3

Cre3
SynonymCcnD1 329, Ccn-D1 328
Chromosome2DL
VarietiesSynthetic hexaploids 329.
dvAe. tauschii accessions AUS 18912 328; AUS 18913 328; CPI 110809 329; CPI 110810 328.
Marker associationsColinearity with 2BL for Xcdo-36-2D and XAtPPr5/Xbcd1231-2D/G4/G12/Cre3 (see Cre1 ) 10013.

CRE

Cre4
SynonymCcn-D2 328, CcnD2 329
Chromosome2D
dvAe. tauschii accessions AUS 18914 329; CPI 110813 328.

CRE5

Cre5
NoteDerived from Ae. ventricosa {0107, 0009}.
SynonymCreX {9, 0183}, QCre-ma2A 11394.
2AS 0107 = 2A-2N[v] -6N[v] .

CRE6

Cre6
NoteDerived from Ae. ventricosa 0138.
Chromosome5N
VarietiesH-9335 0138.
Varieties (alt.)H-93-8 Cre2 0138.

CRE7

Cre7
NoteDerived from Ae. triuncialis 0105.
SynonymCreAet 0105
VarietiesTR353 derivatives 0105.

CRE8

Cre8
SynonymCreF 138, 12
6BL 0220, on basis of linkage with Xbcd1-6B and Xcdo347-6B 220.

CRE9

Cre9
SynonymQCre-ma7D 11394
VarietiesVPM-1/Moisson 95111394. v2 Madsen Cre5 11394; VPM-1 Cre5 11394.
Marker associationsFlanked by Xics7D-27-7D and BS00129645 11394. KASP markers BS00021745 , BS00150072 , and BS00154302 were developed 11394. Cre9 conferred resistance to Chinese isolates of H. filipjevi but not to H. avenae .

Temporay designations

CreX
NoteDerived from Ae. variabilis 2AS or
Chromosome2DS
adLine M 10487.
VarietiesLine D 10486.
Marker associationsRAPD markers OP021000, OpR41600, OpV3450 10486.
CreY
NoteDerived from Ae. variabilis
Chromosome3BL
VarietiesLine X 10487.
Marker associationsCo-segregation with RAPD OpY161065 0103 which was converted to SCAR16 10486. May be the same gene as Rkn-mn1 (see reaction to Meloidogyne naasi ).
QCre.pau-1A
Chromosome1AS
dvT. monococcum Tm 14087 QCre.pau-2A 10749.
Marker associationsQCre.pau-1A was mapped in a 3.6 cM interval in a T. boeoticum Tb 5088 / Tm 14087 RIL population and was flanked by Xcfa2153-1A and BE444890 10749; R[2] =0.2610749. QCre.pau-1A was transferred to tetraploid and hexaploid lines 10749.
QCre.pau-2A
Chromosome2AS
dvT. monococcum Tm 14087 QCre.pau-1A 10749.
Marker associationsQCre.pau-2A was mapped in a 4.00 cM interval flanked by BE498358 and Xwmc358-2A 10749; R[2] =0.1310749.
Qcre.src-1B was located to the Xwmc719-1B (R[2] =12%) – Xgwm140-1B (R[2] =12%) region in Trident/Molineux 10343. For review 11309.

3.13. Reaction to Magnaporthe spp.⌂ Home

Rmg1
SynonymRwt4 0302
Chromosome1D
Sources / synonymsCS (Cheyenne 1D) 10462.
v1Cheyenne 10462; Norin 26 10462; Shin-chunaga 10462.
Varieties (alt.)Norin 4 Rmg6 {0302, 11470}. c Candidate gene encodes a 916 amino acid protein with a wheat tandom kinase (WTK) domain 11632. Rmg1 was present in 87% of surveyed genotypes 11470.

RMG2

Rmg2
Chromosome7A
iCS (Thatcher 7A) 10461.
Varieties (alt.)Thatcher Rmg3 10461.

RMG3

Rmg3
Chromosome6B
iCS (Thatcher 6B) 10461.
Varieties (alt.)Thatcher Rmg2 10461.

RMG4

Rmg4
Chromosome4A
VarietiesNorin 4 10639; Norin 26 10639; Norin 29 10639; P168 10639; Shin-chunaga 10639; T. compactum No. 24 10639. Confers resistance to Digitaria isolate Dig41 at 26C 10639.

RMG5.

Rmg5
Chromosome6D
Sources / synonymsCS (Red Egyptian 6D) 10639.
VarietiesRed Egyptian 10639. Confers resistance to Digitaria isolate Dig41 at 26C 10639.
RMG6 . TraesCS1D02G029900 .
Rmg6
SynonymRwt3 {11470, 11504}
Chromosome1DS
v1Chinese Spring 10948; ShinChunaga 10948, Transfed 11470.
Varieties (alt.)Chinese Spring Rmg9 11504, Norin 4 Rmg1 {10948, 11470}.
Marker associationsXwmc432-1D – 9.6 cM – RMG6 – 6.6 cM – Xwmc222-1D 10948; 11.60 – 11.80 Mb 11632.
cCandidate gene encodes an NRL with 1,069 amino acids (11632}.
Rmg6 was present in 77% of surveyed genotypes 11470}. Xwmc432-1DRMG9 – 5.0 cM – RMG6Xwmc222-1D 11504. A second gene in chromosome 1D designated Rwt4 0302 ( TraesCS1D02G058900 11632) (was present in CS and Norin 4.

RMG7

Rmg7
Chromosome2AL
Type varietiesT. dicoccum KU112 11046; KU120 11046; KU1222 11046.
Marker associationsXcfd50-2A – 5.6 cM – Rmg7 – 15.1 cM – Xhbg327-2A 11083.
cThe sequence of Rmg7 was identical to Pm4a 11735. Rmg7 has the same specificity as Rmg8 11735. Rmg7 and Rmg8 recognise the same Avr-Rmg8 effector 11775.

RMG8

Rmg8
Chromosome2BL
Chromosome bin2BL6-0.89-1.00.
VarietiesS615 11083.
Marker associationsXwmc317-2B – 12.1 cM – Rmg8 – 22.4 cM – Xbarc159-2B 11083.
cThe nucleotide sequence of Rmg8 was identical to Pm4f 11735. Rmg8 has the same specificity as Rmg7 11735. According to 11083 markers linked to RMG8 were independent of those linked to RMG7. The Pm4a allele in some accessions is located in chromosome 2B 11735.
Among PM4 alleles Pm4a, Pm4b and Pm4d conferred resistance to both MoT and Bgt ; Pm5f conferred resistance to MoT but not Bgt , and Pm4f was ineffective against both pathogens 11735.
RmgGR119
VarietiesGR119 11263.
RmgGR119 confers resistance to the wheat form of the pathogen and its response is enhanced in combination with Rmg8 11263. Near-isogenic lines with the T2A-2NS translocation from Ae. ventricosa displayed reduced levels of spike blast, but there was little effect on seedling leaf blast response 11265:

RMG9

Rmg9
Note[ Rwt6 11504.
Chromosome1D
v2 Chinese Spring Rmg6 11504.

RMG10

Rmg10
Chromosome2DS
VarietiesLine 6051 (amphiploid Langdon / KU-2097) Permanent genbank accession number needed 11736.
dvAe. taushii KU-2097 11736.
Marker associationsXbarc-2D – 7.8 cM – Ms-4 – 7.8 cM – RMG10 – 8.3 cM – MS12 – 4.7 cM – Xwmc503-2D 11736.

RMG11

Rmg11
Chromosome7AS
Type varietiesT. dicoccum St19, KU-114 11755. ma IMT5 – 1.0 cM – RMG11IMT6/IMT7 – 1.1 cM – Xgwm635 -7A11755. The Rmg11_ resistance remained effective at 30ºC 11755.

Temporary desigations

RmgGR119
VarietiesGR119 Rmg8 11652.
RmgTd(t)
Chromosome7BL
Type varietiesT. dicoccoides KU109 10949.
Marker associationsXhbg338-7B – 10.5 cM – Rmg7 10949.
RmgTd(t) was detected with a white culture of an Avena pathogen isolate backcrossed to a wheat isolate. A virulence to RmgTd(t) was completely associated with white color of the pathgen isolate 10949. The white color appeared as a mutant variant during backcrossing. The wheat blast pathogen became established on wheat cultivar Anahuac ( rmg1 rmg6 ) in Brazil in the mid-1980s. It was initially avirulent on cultivars such as IAC-5 with Rmg6 but later acquired virulence allowing it to attack most wheat genotypes 11470.

3.14. Reaction to Mayetiola destructor (Say) ( Phytophaga destructor ) (Say)⌂ Home

Insect pest: Hessian fly.

H1

H1
iDawson/3[*] Poso, 6179 1087.
Varieties (alt.)Big Club 43 H2 1441; Dawson H2 166, 1087; Poso 42 H2 1441.

H2

H2
iDawson/3[*] Poso, 6232 1087.
Varieties (alt.)Big Club 43 H1 1441; Dawson H1 166, 1087; Poso 42 H1 1441.

H3

H3
NoteRecessive. 5A 1105, 425. Based on the location of H9 on chromosome 1AS, H3 may also be located on chromosome
Chromosome1AS
iCarol = Newton-207[*] 5/Larned 1107.
VarietiesAce 426; Arthur 426; Becker 749; Cardinal 750; Dual 1273; Frankenmuth 341; Georgia 1123 426; GR855 751; GR876 753; Ike 10252; Ionia 426; Larned 824; Logan 426; Monon 157; Norkan 904; Ottawa 547; Purdue B 36162 A13-12 156; PI 468960 1439; Redcoat 1273; Reed 1273; Riley 1273; Roland 148; Russell 426; Shawnee 547; Titan 747; Todd 426; W38 156.
Varieties (alt.)Clara Fay H6 375.
Marker associationsCosegregation of H3 and a RAPD 296.
Allan et al. 019 considered that H3 and H4 might be allelic. Also suggested by Shands and Cartwright 1317. Linkage of 10.5 +/- 2% involving H3 and Pm3a in PI 468960 was attributed to a chromosome 1A/5A translocation 1437.
H4H4
Synonymh4 1441
Recessive. 1AS 11634. H4 confered resistance to race A, but not to race B.

H5

H5
NoteTemperature sensitive 1413.
Chromosome1AS
VarietiesAbe 162; Arthur 71 162; Beau 875; Downy 1223; Magnum 10252; Oasis 1109; Ribeiro 1317; Sullivan 1110.
Type varietiesGiorgio 331-4 1090; PI 94567-6 1317; PI 94571-14 1317.
Marker associationsCosegregation of H5 and two RAPDs 296.

H6

H6
NoteBased on the location of H9 on chromosome 1AS, H6 may also be located on chromosome
Chromosome1AS
Chromosome5A
iErin = Newton-207[*] 7/Arthur 71 1107; Flynn = Newton-207[*] 7/Knox 62 1107.
VarietiesAdder 1319; Benhur 426; Caldwell 1421; Compton 1318; CI 12855 19; Excel 752; Fillmore 1106; Knox 62 426; Lathrop 426.
Varieties (alt.)Clara Fay H3 375.
Type varietiesPurdue 4835 A4-6 1105.
tv2PI 94587 H11 H16 19.
Marker associationsCosegregation with three RAPDs 296.

H7 and H8

H7 & H8
NoteDuplicate factors. H7 is located in chromosome
Chromosome5D
VarietiesAdena 748; Seneca 425,26.
H7. 6AS 11511; 5D 026.

H9

H9
Chromosome1AS
Chromosome5A
iIris = Newton-207[*] 7/Ella 1107.
VarietiesElla 875; Line 822-34 162.
Varieties (alt.)Elva CI 17714 H10 162; Line 812-24 H10 1421; Line 817-2 H10 1421; Stella H10 875.
Marker associationsCosegregation with two RAPDs 296; STS-Pm – 1.7 cM – SOP005 909 – 0.6 cM – Xksu11/Xcnl76/Xgdm3 – 0.5 cM – Xgwm176/Xpsp2999/Xcfa2153-1A – 0.5 cM – Xbarc263-1A – 1.2 cM – H9 - Xwmc24-1A 10231; Xcfa2153-1A – 0.5 cM – H9 – 0.3 cM – Xbarc263-1A 10252.

H10

H10
NoteMay be identical to H9 10252.
Chromosome1AS
Chromosome5A
iJoy = Newton207[*] 3/IN76529A5-3-3 1107.
VarietiesIN76529 875.
Varieties (alt.)Elva CI 17714 H9 162; Line 817-2 H9 162; Stella H9 875.
Marker associationsCosegregation with one RAPD and close linkage to another RAPD 296; Xcfa2153-1A – 0.5 cM – H10 – 1.3 cM – Xbarc263-1A 10252; Xrapd9-2-1000/Xpsp29991A/Xgps7072-1A – 2.2 cM – H10 10252.

H11

H11
Chromosome1A
Chromosome1AS
iKaren = Newton-207[*] 4/IN916-1-3-1-47-1 1107.
VarietiesKay 875,375; Line 916 1422; Line 920 1422; Line 941 1422.
tv2T. turgidum PI 94587 H6 H16 1422.
Marker associationsClose linkage with two RAPDs296; Xcfa2153-1A – 0.3 cM – H11 1.7 cM – Xbarc3631A 10252.

H12

H12
Chromosome5A
iLola = Newton-207[*] 4/Luso 1107.
VarietiesLuso 1092.
Marker associationsCosegregation with one RAPD and close linkage of H12 to another RAPD 296.

H13

H13
Chromosome6DS
Chromosome6DL
iMolly = Newton-207[*] 7/3/KU221-19/Eagle/ KS806 1107.
VarietiesAGS 2010 11008; AGS 2026 PI 658065 11008; KS81H1640HF 441; Oglethrope PI 657986 11008; PI 562619 10388; SW34=Langdon/ Ae. tauschii RL 5544 10388; T. turgidum var. durum cv. Gulab KU 134/ Ae. tauschii KU 2076, KU 221-14 525; T. turgidum var. persicum straminium KU 138/ Ae. tauschii KU 2076, KU221-19 525.
dvAe. tauschii KU 2076 525.
Marker associationsCosegregation with a RAPD296; Xgdm36-6D – 2.7 cM – H13/Xcfd132-6D – 1.1 cM – Xcfd213-6D 10251; Xcfd132-6D – 3.7 cM – H13 10388.

H14

H14
Chromosome5A
Type varietiesIN 81601A2-3-3 875.
tv2ELS 6404-160 H15 875.
Marker associationsCosegregation with a RAPD 296.

H15

H15
Chromosome5A
Based on the location of H9 on chromosome 1AS, H15 may also be located on chromosome 1AS 10231.

H16

H16
Chromosome5A
Chromosome1AS
Chromosome bin1AS-3-0.86-1.00.
VarietiesP921682 11058.
Type varietiesIN 80164H5-2-9 1106; N80164 1097.
tv2PI 94587 H6 H11 1106.
Marker associationsCosegregation of H16 and a RAPD296; Xpsp2999-1A – 3.7 cM – H16 – 5.5 cM – Xbarc263/Xwem6B-1A 11058.

H17

H17
Chromosome5A
Chromosome1AS
Chromosome bin1AS-3-0.86-1.00.
VarietiesP921680 11058.
Type varietiesPI 428435 1090.
Marker associationsCosegregation of H17 and a RAPD 296; Xpsp2999-1A – 6.27 cM – H17 – 5.1 cM – Xbard263/Xwem6B-1A 11058.

H18

H18
VarietiesMarquillo 426,874; Redlant 10715; Shield 198.

H19

H19
Type varietiesPI 422297 1089; This germplasm possesses a second gene which is allelic or closely linked with H16 1089; IN84702 1097.
tv2PI422297 H29 1097.

H20

H20
Chromosome2B
Type varietiesJori 25.
H21 H21
Note2B 383 =
Chromosome2BS
2R#2L 389.

H22

H22
Chromosome1D
Chromosome1DS
VarietiesKS86WGRC1 1199; KS85WGRC01= Ae. tauschii TA1644/Newton//Wichita 1199; PI 572542 10388.
Marker associationsXgdm33-1D – 1.0 cM – H22 – 0.3 cM – Xhor2KV-1D – 0.5 cM – Xgpw7082-1D 10381.

H23

H23
Chromosome6DS
Chromosome6DL
Chromosome6D
VarietiesKS89WGRC03 = TA1642 / 2*Wichita 10251,442; PI 535766 10388.
alAe. tauschii TA1642 10251.
Marker associationsH23 – 6.9 cM – XksuH46D 861; Maps to same region as H13 10262.

H24

H24
Chromosome6DL
Chromosome3D
VarietiesKS89WGRC6 442; PI 535769 10388.
Marker associationsH24 – 5.9 cM – Xbcd451-6D/Xcdo482-6D 861.

H25

H25
Note6B384 = T
Chromosome6BS
6BL-6R#1L 389

H26

H26
Chromosome4D
Chromosome3DL
Chromosome bin3DL3-0.81-1.00.
VarietiesKS92WGRC26 217; SW8 = Langdon/ Ae. tauschii CIae 25 10388.
dvAe. tauschii TA2473 217.
Marker associationsXcfd211-3D – 7.5 cM – H26 – 2.9 cM – Xwgc7330-3D – 4.0 cM – Xgwm3-3D 10388. Xrwgs-3D – 3.2 cM – H26/Xrwgs11-3D – 1.0 cM – Xrwgs12-3D 10846.
H26 is very close to H32 10846. H27
H27
Chromosome4M
suH-93-33 235.
alAe. ventricosa No. 10 235; Ae. ventricosa No. 11 235.
H28
H28
Note5[A] 171.
Type varietiesPI 59190 171.
H29
H29
SynonymH27 171
Chromosome5A
Type varietiesPI422297 H19 1097.
H30
H30
NoteDerived from Ae. triuncialis 0256.
VarietiesTR-3531 256.
alAe. Triuncialis 256.
H31
H31
Chromosome5BS
VarietiesP961696332.
Type varietiesCI 3984332.
Marker associationsSTS marker Xupw4148-5B – 3 cM – H31 332.
H32
Chromosome3DL
Chromosome bin3DL3-0.81-1.00.
VarietiesSynthetic W7984 10137.
Marker associationsXgwm3-3D – 1.7 cM – H32 – 1.7 cM – Xcfd-3D 10137; Xrwgs10-3D – 0.5 cM – H32/Xrwgs11-3D – 0.5 cM – Xrwgs12-3D 10846. KASP markers developed 11633. H32 is very close to H26 10846.
H33
H33
Chromosome3AS
VarietiesLine 97211 10954.
Type varietiesPI 134942 10954.
Marker associationsXgwm218-3A – 10 & 7 cM – H33 – 28 & 25 cM – Xhbg-3A 10954.

H34

H34
SynonymQhf.hwwg-6B 11018
Chromosome6BS
VarietiesClark 11018.
Marker associationsFlanked by Xsnp9216B and Xsnp2745-6B within a 4.5 cM region, R[2 ] = 0.38-0.42 11018.
Halotype analysis was used to postulate Ae. tauschii -derived genes H13, H22, H23, H26 and H32 in a set of synthetic wheat lines 10983. H35 in chromosome arm 3BS and H36 in chromosome arm 7AS were named for one major and one minor QTL in common wheat line SD06165 11512. Temporary designations:
Hdic
Chromosome1AS
VarietiesKS99WGRC42 10262. tv T. dicoccum PI 94641 10262.
Marker associationsXcfa2153-1A – 1.4 cM – Hdic – 0.6 cM – Xgwm33-1A 10262.
HNC09MDD14
SynonymHf-NC09MDD14 10844
Chromosome6DS
VarietiesNC09MDD14 PI 656395 10843.
dvAe. tauschii TA2492 and/or TA2377 10843.
Marker associationsXgdm36-6D – 1.5 cM – HNC09MDD14/Xcfd123-6D 10843; HNC09MDD12 could be allelic to, but is different from, H13 10843.
HR61
Chromosome6AL
Chromosome bin6AL8-0.90-1.00 11008.
Varieties26R61 PI 612153 11008.
Marker associationsMapped as a QTL (R[2] =0.63) flanked by Xgwm427-6A and wPt-731936 11008.
HWGRC4
Chromosome6DS
VarietiesKS89WGRC04 = TA 1695 / 3*Wichita 10251.
Marker associationsAllelic with H13 10251.
A recombination value of 12.0% between leaf-rust reaction {possibly Lr10 } and Hessian-fly reaction in Selection 5240 was reported 018.
Qhf-hwwg-1A
Chromosome1AS
VarietiesClark H34 11018.
Marker associationsClosely linked to Xwgm33-1A 11018; Located within a 6 cM region flanked by Xwgm33-1A and Xsnp5150-6B , R[2] =0.1 11018.
QHf.hwwg-6BS
Chromosome6BS
VarietiesChokwang 11635.
Marker associationsLocated to interval 6BS 6.029 – 10.779 Mb (CS RefSeq v2.0) 11635. KASP markers developed 11635.
QHf.hwwg-6BS
Chromosome6BS
VarietiesChokwang 11635.
Marker associationsLocated to interval 6BS 6.029 – 10.779 Mb (CS RefSeq v2.0) 11635. KASP markers developed 11635.
QH.icd-2A
NotePutatively derived from T. dicoccum 11510.
Chromosome2AL
Marker associationsLinked with Ax94980581I 11510.
QH.icd-5B
Chromosome5BS
Type varietiesDWHF01 11510. Possible overlap with H31 11510.
Qhara.icd-6B
Chromosome6BS
Type varietiesT. timopheevii subsp. ameniacum derivatives: DWHF02 11510; Chaoui 11510; Icamoram7d {11510; Marouane 11510; Nassira 11510.
Marker associationsLinked with Ax95181449 11510.
Duster (R) / Billings: DH population: QHf.osu.1A.2 (Syn. QHf.osu-1A[d] ), R[2] = 0.88, delimited to a 2.7 cM region flanked by GBS07851 and GBS10205 11324. This was a distinct locus 11.2 cM proximal to QHf.osu.1A . Jagger (S) / 2174 9 (R): RIL population: QHf.osu-1A (Syn. Qhf.osu[74] (R[2] = 0.70) and QHf.osu-2A (R[2] = 0.18) 11325. The QTL in chromosome 1A appeared to be co-linear with several previously named H genes in tetraploid wheat; the gene in 2A was in repulsion with the 2N segment present in Jagger 11325.

Mayetiola-destructor susceptibility gene-1

Mds-1A
Note[ Mds-1 ] 11327.
Chromosome3AS
VarietiesNo allelic variation demonstrated.
cEST CD453475, GenBank JN162442; Mds-1A encodes a 151 amino-acid protein with 96% identity with HSP16.9 11327. Homoeologues are present in chromosomes 3B and 3D. Silencing of Mds-1 expression caused immunity in otherwise FHB-susceptible genotypes 11327.

RKN1

Rkn1
SynonymRkn 632
Chromosome6D
dvAe. tauschii G3489.
VarietiesProsquare, a synthetic hexaploid of Produra/ Ae. tauschii G3489 632.

RKN2

Rkn2
NoteDerived from Ae. peregriina (variabilis) 1621.
SynonymRkn-mn1 1621
Chromosome3B
VarietiesX8 = CS/ Ae. peregrina No. 1//Rescler/3/Lutin 1620; X35 {1620, 1621}.
Marker associationsCo-segregation with RAPD OpY16 1065 and close linkage with several markers including Est-B5 103; converted to SCAR Y16
10486; May be the same as CreY (see reaction to Heterodera avenae ) on chromosome 3S[V] from Ae. variabilis translocated to 3BL 10800.

RKN3

Rkn3
NoteDerived from Ae. ventricosa 2NS translocation into
Chromosome2AS
VarietiesVPM1, Lassik (PI 653535) 10801.
Marker associationsResistances to M. javanica and M. incognita mapped to the 2NS translocation in BC6F3 near isogenic lines of Anza (PI 638742), Yecora Rojo, and Express with the 2NS translocation 10801.

3.16. Reaction to Mycosphaerella graminicola (Fuckel) Schroeter, Zymoseptoria tritici⌂ Home

Disease: Septoria tritici blotch

STB1

Stb1
SynonymSlb1 1586
Chromosome5BL
Chromosome binFL 5BL-11 - 5BL-14 10123;
VarietiesBulgaria 88 1586; Oasis 1586; P881072-75-1 10123; SO852 10123; Sullivan 1586.
Marker associationsClose linkage with 2 RAPD markers at >0.68 and 1.4 cM in P881072-75-1 10123; Cent..... Xbarc74-5B – 2.8 cM – Stb1 10123.

STB2

Stb2
SynonymSlb2 1586
Chromosome1BS
Chromosome3BS
VarietiesNova Prata 1586; Veranopolis 1586.
Marker associationsXgwm389-3B/Xgwm533-3B – 1.0 cM – Stb2 – 3.7 cM – Xgwm493-3B 10105; Stb2 is neither on 3BS nor linked with Xgwm389-3B 10976; Xwmc406-1B – 6.0 cM – Stb2 – 5.0 cM – Xbarc008-1B 10976.

STB3

Stb3
SynonymSlb3 1586
Chromosome7AS
6D, 10105 (according to 10556 this location is not correct.

STB4

Stb4
Chromosome7DS
Chromosome7D
VarietiesCleo 1410; Gene 10010; Tadinia 10140,1410; Tadorna 1410.
Marker associationsXAGG/CAT10 – 4.0 cM – Stb4 – 0.7 cM – Xgwm111-7D – 1.4 cM – XATCG/CAAA5 .......Cent 10140; Stb4 – 0.7 cM – Xgwm111-7D 10140. Stb4 segregated independently of Stb1 but its relationship with Stb2 and Stb3 is unknown. Genetic analysis of Tadinia indicated single gene segregation (assumed to be Stb4 ) with a Californian culture but a different single gene segregated with South American isolates 10140.

STB5

Stb5
NoteIdentified using M. graminicola IPO94269 0186. Derived from Ae. tauschii accession 37-1 0186.
Chromosome7DS
VarietiesBaldus 11446; Bezostaya 0187; Chaucer 11446; Hereward
0187; Israel 493 11446; Longbow 11446; Olaf 11446; Sears' Synthetic 0186; Senat 11446; Shafir 0; Veranopolis 11446; Vivant 0187.

STB6

Stb6
NoteConfers resistance to M. graminicola isolate IPO323 but not to isolate IPO94269 0187.
SynonymTaWAKL 4 11434
Chromosome3AS
VarietiesAmigo 10448; Arina 10448; Amada 10448; Atlas 66 10448; Ble Seigle 10448; Bon Fermier 10448; Cadenza 11434; Chinese Spring 10448; Bezostaya 1 10495; Flame {187, 11434}; Gene 10448; Heines Kolben 10448; Hereward 10448; Poros 10448; Senat 10448; Shafir 10448; Tadinia 10448.
Varieties (alt.)Bulgaria 88 Stb1 10448; Israel 493 Stb3 10448; Kavkaz-K4500 Stb7 Stb10 Stb12 10011; TE9111 Stb7 Stb11 10012; Veranopolis Stb2 10448. tv Stb6 is common in T. dicoccum 11434.
Marker associationsA resistance gene from Senat located at or near the Stb6 locus was mapped 5 cM from microsatellite Xgwm369-3A on chromosome arm 3AS 10067; Xgwm369-3A – 4.3 cM – Stb6 – 3.8 cM – Xgwm132-3A 11434.
cEncodes a wall-associated receptor kinase (WAK)-like protein 11434.

STB7

Stb7
Chromosome4AL
VarietiesST6 = Estanzuela Federal.
Varieties (alt.)Kavkaz-K4500 Stb6 Stb10 Stb12 10011; TE9111 Stb6 Stb11 10012.
Marker associationsXwmc219-4A – 0.8 cM – Xwmc-4A – 0.3 cM – Stb7 0311; Stb7 was closer to Xwmc313-4A than to Xwmc219-4A 10011.

STB8

Stb8
Chromosome7BL
VarietiesSynthetic hexaploid W7984 (parent of ITMI population) 0326.
Marker associationsXgwm146-7B – 3.5 cM – Stb8 – 5.3 cM – Xgwm577-7B 0326.

STB9

Stb9
NoteCulture IPO89011
Chromosome2BL
VarietiesCourtot 10027; Tonic 10027.
Marker associationsXfbb2262B – 3 cM – Stb9 – 9 cM – XksuF1b-2B 10027.

STB10

Stb10
NoteConfers resistance to cultures IPO94269 and ISR8036, but not to IPO87019 10011.
Chromosome1D
Varieties (alt.)Gene Stb5 11446; Frontana Stb5 11446; Kavkaz-K4500 L.6.A.4 Stb6 Stb7 Stb12 = JIC.W9995 10011; Mentana Stb5 11446.
Marker associationsAssociated with Xgwm848-1D 10011.

STB11

Stb11
NoteConfers resistance to isolate IPO90012 10012.
Chromosome1BS
VarietiesJIC W 9996; TE9111.
Varieties (alt.)TE9111 Stb6 Stb7 10012.
Marker associationsDistal to Xbarc008-1B 10012.

STB12

Stb12
NoteConfers resistance to cultures ISR398, ISR8036 and IPO87019 10011.
Chromosome4AL
Varieties (alt.)Kavkaz-K4500 Stb6 Stb7 Stb10 10011.
Marker associationsStb12 was closer to Xwmc219-4A than to Xwmc3134A 10011.

STB13

Stb13
NoteConfers resistance to Canadian cultures MG96-13 and MG2 10347
Chromosome7BL
VarietiesDH line 90S05B*01 10347; DH line 98S08C*03 10347.
Varieties (alt.)Salamouni Stb14 10347.
Marker associationsXwmc396-7B – 9 cM – Stb13 10347; Xwmc396-7B – 7 cM – Stb13 10347.

STB14

Stb14
NoteConfers resistance to Canadian isolate MG2 but not to MG96-13 10347
Chromosome3BS
VarietiesDH line 98S08A*09 10348.
Varieties (alt.)Salamouni Stb13 10347.
Marker associationsXwmc500-3B – 2 cM – Stb14 – 5 cM – Xwmc623-3B 10348.

STB15

Stb15
NoteConfers resistance to Ethiopian culture IPO88004 10341
Chromosome6AS
VarietiesRiband 10341.
Varieties (alt.)Arina Stb6 10341.
Marker associationsStb15 – 14 cM – Xpsr904-6A 10341.

STB16

Stb16
NoteSeedling and adult plant resistance
SynonymStb16q 10879
Chromosome3DL
Varieties (alt.)Synthetic W- 7976 Stb17 10879.
Marker associationsAssociated with Xgwm494-3D and mapped as a QTL, R[2] =0.4-0.7 in seedling tests and 0.28-0.31 in mature plants 10879.

STB17

Stb17
NoteAdult plant resistance
Chromosome5AL
Varieties (alt.)Synthetic W-7976 Stb16 10879.
Marker associationsAssociated with Xhbg247-5A and mapped as a QTL, R[2] =0.12-0.32 10879.

STB18

Stb18
NoteConfers resistance to IPO0323, IPO98022, IPO98046 10827
Chromosome6DS
Varieties (alt.)Balance Stb6 Stb11 10827.
Marker associationsMapped as a QTL located in a 8.8 cM region spanned by Xgpw30876D and Xgpw5176-6D 10827.

STB19

Stb19
NoteDerived from synthetic wheat.
Chromosome1DS
VarietiesLorikeet 11360.
Marker associationsKASP markers snp4909967 and snp1218021 11360.
See {11332, 11361} for reviews. Temporary designation
TmStb1
NoteResistance to IPO323.
dvT. monococcum MDR043 11446.
QTL Four QTLs for resistance to Mycosphaerella graminicola were identified in replicated field experiments in a double haploid population from Savannah (susceptible)/Senat (resistant) . Senat contributed all the alleles providing resistance 10067. QStb.riso-2B was mapped on chromosome arm 2BL linked to SSR marker Xwmc175-2B (LOD>5, R[2] >17%) 10067. QStb.riso-3A.2 was mapped on chromosome arm 3AS linked to SSR markers Xwmc489-3A, Xwmc3883A and Xwmc505-3A (LOD >4, R[2 ] >18%). Also detected at the seedling stage 10067. Xgwm369-3A is present on chromosome arm 3AS 0187. A resistance gene from Senat located at or near the STB6 was mapped 5 cM from Xgwm369-3A on chromosome arm 3AS 10067. QStb.riso-6B was mapped on the centromeric region between SSR markers Xwmc494-6B and Xwmc3416B (LOD >16, R[2 ] >68%). Also detected at the seedling stage 10067. QStb.riso-7B was mapped on chromosome 7B close to SSR marker Xwmc517-7B (LOD>4, R[2 ] >11%) 10067. ITMI Population: Three QTL, QStb.ipk-1DS, QStb.ipk-2DS and QStb.ipk-6DS conferred seedling-stage resistance to 2 isolates, whereas 2 QTL QStb.ipk-3DL and QStb.ipk-7BL conferred separate adult-stage resistances to each isolate 10151. A weak QTL, QStb.psr-7D.1 , giving partial resistance to Portuguese isolate IPO92006, was detected in the Xcdo475b-7B - Xswm5-7B region in chromosome 7DS 10341. Apache / Balance: Analyses with a panel of M. graminicola cultures identified QTLs on chromosomes 1BS (Apache, considered to be Stb11 ), 3AS (Balance, considered to be Stb6 ), 6DS (Balance, named as Stb18 ), 7DS (Apache, considered to be Stb4 ) and 7DL (Apache) 10827. Florett / Biscay (S): RIL population: two QTLs for APR were located on chromosomes 3B and 6D 10901. Solitar (R) / Mazurka (S): DH population: Resistance under field conditions was associated with QTL on chromosomes 5A, 6D and 7D which accounted for 20% of the genotypic variation; all three were derived from Solitar, but there was no evidence that Stb6 and Stb11 , also present in Solitar, were involved 10984. Spelt HRTI1410 (R) / three wheat parents: 135 DH lines: mapped using SNP polymorphisms common to all three S parents: four QTL identified on chromosome 5AL (74.2 – 82.4 cM; r[2] = 0.18); 4B (52.9 – 56.9 cm, r[2] = 0.09) contributed by the susceptible parents; and 7B.1 (41.2 – 57.0 cM, r[2] = 0.09), and 7B.2 (58.2 – 67.4 cM, r[2] = 0.15) contributed by the susceptible parents 11430. Steele-ND (R) / ND735 (S): RIL population: A consistent QTL (R[2] =0.1) for seedling resistance flanked by DArT markers XwPt-7101 and X377410 was mapped to chromosome 5BL in the region of Stb1 10992. Two other QTLs on chromosomes 1D and 7A were detected in single experiments 10992. Tuareg / Biscay (S): RIL population: two QTLs for APR were located on chromosomes 4B and 6B 10901. For a review of qualitative and quantitative resistance 11439.

3.17. Reaction to Phaeosphaeria nodorum (E. Muller) Hedjaroude (anamorph: Stagonospora nodorum (Berk.) Castellani & E.G. Germano); Parastagonospora nodorum⌂ Home

Disease: Septoria nodorum blotch, Stagonospora nodorum blotch.

SNB1

Snb1
Chromosome3AL
VarietiesRed Chief 856.
Varieties (alt.)EE8 Snb2 856.

SNB2

Snb2
Chromosome2AL
Varieties (alt.)EE8 Snb1 856.

SNB3

Snb3
Chromosome5DL
Sources / synonymsCS[*] /Synthetic 5D 1594.
VarietiesSynthetic 1594.
dvAe. Tauschii 1594.
QTL A QTL analysis of SNB response in the ITMI population found significant effects associated with chromosome 1B (probably Snn1 ) and 4BL, with an interactive effect involving the 1BS region and a marker on chromosome 2B 10009. An additional QTL on 7BL was effective at a later stage of disease development 10009. Arina / Forno: RIL population 10065. Two QTLs for glume blotch resistance under natural infection were identified on chromosomes 3BS and 4BL in. QSng.sfr-3BL was associated with marker Xgwm3893B and explained 31.2% of the variation with resistance contributed by Arina 10065. The 4BL QTL, QSng.sfr-4BL , was associated with Xgwm251-4B and explained 19.1% of the variation. Resistance was contributed by Forno 10065. A QTL on 5BL, QSng.sfr-5BL , overlapped with QTLs for plant height and heading time 10065. QSng.sfr-3BS peaked 0.6 cm proximal to Xsun2-3B 10465. Association mapping involving 44 modern European cultivars indicated that the association was retained in a significant proportion of genotypes 10465. Br34 / Grandin: Three QTLs with resistance effects from BR34; Qsnb.fcu-5BL.1 ( Tsn1 ), R[2] = 0.63, Qsnb.fcu5BL.2, R[2] = 0.06, and Qsnb.fcu-1BS (vicinity of Snn1 ), R[2] = 0.10 10458. QTL analysis of the RIL population with Culture Sn6 revealed four QTLs, Qsnb.fcu-2DS (R[2] = 0.3 - 0.49) associated with Snn2 , Qsnb.fcu-5BL (R[2] = 0.14 - 0.2) associated with Tsn1, Qsnb.fcu-5AL (R[2] = 0 - 0.13) associated with Xfcp13-5A , and Qsnb.fcu-1BS (R[2] = 0 - 0.11) associated with Xgdm125-1BS 10507. Forno (S) / Oberkulmer spelt (R): Among 204 RILs leaf and glume response were genetically different but correlated (R[2] =0.52). Ten QTLs for glume blotch (SNG) resistance were detected, 6 from Forno. A major QTL (R[2] =35.8%) was associated with q. Eleven QTLs (4 from Forno) affected leaf blotch; 3 of these (chromosome 3D, 4B and 7B) with R[2] >13% were considered potential candidates for MAS 10250. HRWSN125 (R) / WAWHT2074 (S): Constant detection of QSnl.daw-2DL for flag leaf resistance, and QSng.daw-4BL for glume resistance over two years 10584. ITMI population: A major QTL, coinciding with Snn1 , was located in chromosome 1BS (R[2] = 0.58, 5 days after inoculation), minor QTL were found in 3AS, 3DL, 4AL, 4BL, 5DL, 6AL and 7BL 10009. P91193D1 (partially resistant) / P92201D5 (partially resistant) RIL populations were tested in Indiana and Western Australia for glume resistance. Two QTL were identified: Qng.pur-2DL.1 from P91193D1 (R[2] = 12.3 in Indiana and 38.1% in WA, respectively; Xgwm526.1-2D - Xcfd50.2-2D ) and QSng.pur2DL.2 from P99201D5 (R[2] = 6.9% and 11.2%, respectively; Xcfd50.3-2D - wPT9848 ) 10471. Liwilla / Begra: DH population: Four QTLs, on chromosomes 2B (proximal part of long arm), 3B (distal part of short arm), 5B and 5D. A longer incubation period and lower disease intensity were contributed by Liwilla 10045. A QTL, QSnl.ihar-6AL , identified in DH lines of Alba (R) / Begra (S) accounted for 36% of the phenotypic variance in disease severity and 14% of the variance in incubation period 10143. Salamouni/Katepwa: RIL population: Two QTLs. QSnb.fcu-1A ( Snn4 ) (R[2] =0.24) and QSnb.fcu-7A (R[2] =0.16) were associated with SNB response to isolate Sn99CH 1A7a 10867. ## Tetraploid wheat Langdon / Langdon ( T. turgidum ssp. dicoccoides Israel-A 5B): QSnb.ndsu-5B located 8.3 cM proximal to tsn1 for tan spot resistance; R[2] = 0.38 10597. A summary of QTL analyses is provided in 10726.

TSN1

Tsn1
NoteSensitive to SnToxA, which is functionally identical to Ptr ToxA 10459.
VarietiesCheyenne 7; Forno 10725; Hope 7; Jagger 7; Kulm {10458, 10030, 346}; ND495 7; Timstein 7; Trenton 315.
dvTwo Ae. speltoides accessions 10756.
Type varietiesLangdon 10458; Some T. dicoccoides accessions 10756.
cTsn1 has 8 exons and a S/TPK-NBS-LRR structure; all three domains are required for function and TSN1 protein does not interact directly with ToxA 10756. See reaction to Pyrenophora tritici repentis 10458.
tsn1 10207, 346. Insensitivity (disease resistance) is recessive 346. 5BL 346.
snn1tsn1
Atlas 66 10458; BR34 10458; Erik 10458; Opata 85 10458; ND688 10458.

SNN1

Snn1
NoteTaWAK 11341. Sensitivity to SnTox1 is dominant 10008
Chromosome1BS
Chromosome bin1BS.sat.18.
Sources / synonymsCS-DIC 1B 10008.
VarietiesCS 10008; Grandin 10008; Kulm 10008; M-6 10960; ND495 10008.
Marker associationsSnn1 – 4.7 cM – XksuD14-1B 10008; XksuD14.2-1BS – 0.4 cM – Snn1/XBE498831/XBF474204 – 0.4 cM Xpsp3000-1BS/XBE422980/XBE637568/ZBE605202 10727;
XksuD14.2 **–
snn1
iCS*/ T. dicoccoides 1B 10008.
suCS/Hope 1B 11341.
VarietiesBr34 10008; Erik 10008; Opata 85 10008.

SNN2

Snn2
NoteSensitivity to SnTox2 is dominant 10507.
Chromosome2DS
VarietiesBG223 10507.
Varieties (alt.)Grandin Tsn1 Snn3 10507.
Marker associationsXgwm614-2D **–
snn2
VarietiesAtlas 66 10724; Br34 10507; Cheyenne 10724; Chinese Spring 10724; Jagger 10724; Opata 85 10724; Salamouni 10724; TAM 105 10724.

SNN3

snn3
VarietiesBR34 10507.

SNN4

Snn4
NoteSensitivity to SnTox4 is dominant 10725
Chromosome1AS
Chromosome bin1AS3-0.86-1.00 10725.
VarietiesArina 10725; Katepwa 10867; Salamouni 10867.
Marker associationsXBG262267/ **–
snn4
VarietiesForno 10725.

SNN5

Snn5
Chromosome4BL
Chromosome bin4BL5-0.85-1.00.
Type varietiesT. carthlicum PI 94749 10925.
tv2Lebsock Tsn1 Snn3-B1 11203.
Marker associationsXbarc163/Xcfd-4B **–
snn5
Type varietiesLP749-29 10925; PI 94749 10925.

SNN6

Snn6
Chromosome6AL
VarietiesOpata 85 11206; RIL ITMI137 11206.
Marker associationsFlanked by XBE424987 and XBE403326 11206.
snn6 . v: Synthetic W-7984 11206.

SNN7

Snn7
NoteSensitive to SnTox7.
Chromosome2DL
Chromosome bin2DL-9-0.75-1.00.
VarietiesTimstein 11292.
Marker associationsXcdf267-2D – 2.3 cM – Xgdm6-2D – 0.9 cM – Snn7/Xcfd44-2D – 1.8 cM – Xgwm349-2D – 11.3 cM – Xgwm311-2D 11292.
QSnn.niab-5A.1
VarietiesIdentified in the UK MAGIC population 11133.
ITMI population: A major QTL, coinciding with Snn1 , was located in chromosome 1BS (R[2 ] = 0.58, 5 days after inoculation), minor QTLs were found in 3AS, 3DL, 4AL, 4BL, 5DL, 6AL and 7BL 10009. P91193D1 / P92201D5: RIL population: tested in USA and Australia: QSng.pur-2DL.1 from P91103D1, R[2] =0.123 (Indiana) and 0.381 (South Perth); and QSng.pur-2DL.2 from P92201D5, R[2] =0.069 (Indiana) and 0.112 (South Perth) 10776. Host sensitivity genes in US southern winter wheats are listed in 1241.

3.18. Reaction to Pratylenchus spp.⌂ Home

Root lesion nematode; prats

RLNN1

Rlnn1
Chromosome7AL
VarietiesExcalibur 0121; Krickauff 0121.
Marker associationsMapped between markers Xpsr121-7A and Xgwm344-7A and 9 cM proximal to Lr20 0374.

3.19. Reaction to Puccinia coronata var. hordei .⌂ Home

CR1

Cr1
Chromosome5DL
VarietiesChris CItr 14108 10956.
Marker associationsXwmc41.2-5D **–

3.20. Reaction to Puccinia graminis Pers.⌂ Home

Disease: Black rust; black stem rust; stem rust.

Note: Some near-isogenic lines are based on Marquis. The genes present in the Marquis background are not listed for those NILs.

SR1
Deleted - see Sr9d .

SR2

Sr2
NoteRecessive allele. Adult plant response.
Chromosome3BS
Sources / synonymsCS[*] 6/Hope 3B 499.
Varieties (alt.)HD2009 Sr30 10632; Warigo Sr7b Sr17 499; Suneca Sr8a Sr17 485; Hopps Sr9d 499; Lancer Sr9d Sr17 679; Scout Sr9d Sr17 679; See also 1040,499.
Marker associationsXgwm389-3B **–

SR3 & SR4

Sr3 & Sr4
VarietiesMarquillo - based on early data. No stocks for the individual genes available.

SR5

Sr5
Note6D 1308, 939, 1626.
Chromosome6DS
iI Sr5 -Ra 828; I Sr5 -Rb 828; Sr5/7[*] LMPG 685; Thatcher/10[*] Marquis 686.
Sources / synonymsCS[*] 6/Thatcher 6D 1308.
VarietiesAdmonter Fruh 72; Dacia
979; Dong-Fang-Hong 2 564; Dong-Fang-Hong 6 564; Feng-Kong 563; Hochzucht 46; Hybrid 80-3 72; Jubilejna 68; Juna 76; Kanred 1308; Ke-Fang 1 564; Stabil 72; Viginta 71; Vrakunski 72.

SR6

Sr6
SynonymSrKa1 1167
Chromosome2D
Chromosome2DS
Chromosome bin2DS5 - 0.47 - 1.00 10714.
iI Sr6 -Ra 828; Kenya 58/10[*] Marquis {675, 468}; Sr6/9[*] LMPG 685.
Sources / synonymsCS[*] 5/Red Egyptian 2D 1308.
VarietiesAfrica 43 669; Eureka {468, 844}; Kenya stocks {1167, 669, 1557, 687, 673, 670, 689}; McMurachy 679; Shield 198.
Varieties (alt.)Bowie Sr8a 1553; Eurga Sr11 1553; Fortuna Sr7a 679; Gamut Sr9b Sr11 1555; Glenlea (heterogeneous) Sr5 Sr9b 327; Kentana 52 Sr7a {1577, 678}; Kiric 66 Sr7b 979; Lerma Rojo 64 Sr7b Sr9a 979; No. 466 Sr9b Sr10 689; Red Egyptian Sr8a Sr9a 1308, 687; Siete Cerros Sr11 33; Victor I Sr5 Sr8a 979.
Marker associationsSr6 **–
Sr7a
SynonymSr7 687
iEgypt Na101/6[*] Marquis 468; Kenya 117A/6[*] Marquis 468; Sr7a/9[*] LMPG 685.
Sources / synonymsCS[*] 7/Kenya Farmer 4B 830; CS[*] 8/Sapporo 4B 830.
VarietiesEgypt Na101 669; Jagger Sr38 11420; Kenya stocks669, 687, 673, 670, 689; Sapporo Haru Komugi Ichigo 689.
Varieties (alt.)Egypt Na95 Sr9b Sr10 687; Fortuna Sr6 679; French Peace Sr9a Sr13 680; Kentana 52 Sr6 689; Khapstein Sr13 Sr14 674; W3746 Sr12 1371.
Marker associationsXwmc313-4ASNP1067 – 0.8 cM – Sr7a – 2.7 cM – Xbarc78-4A – 2.7 cM – SNP7126 11420.
Sr7b
iI Sr7b -Ra 828.
Varieties (alt.)Warigo Sr2 Sr17 499; Kiric 66 Sr6 979; Roussalka Sr8a 979; Red Bobs Sr10 308; Nell Sr17 1565; PI 177906 Sr28 SrTmp 11419; Spica Sr17 939; Marquis Sr18 Sr19 Sr20 675, 830. ma Located at 147-164 Mb in the Wang et al. (2014) consensus map 11419.
SR8 6A {1293, 1308}. 6AS929, 1368.
Sr8a
SynonymSr8 687
iI Sr8a-Ra 828; Red Egyptian/10[*] Marquis 686; Sr8a/9[*] LMPG 685.
Sources / synonymsCS[*] 5/Red Egyptian 6A 1308.
VarietiesHarvest 11418; Marimp 3 979; Mentana 844; Strampelli 979.
Varieties (alt.)An-Hewi II Sr5 564; E-Gan-Zao Sr17 564; Erythrospermum 974 Sr5 72; Frontana b 689; Golden Valley Sr17 979; Hartog Sr2 Sr12 127; Magnif G Sr9b 689; Pitic 62 Sr9b 33; PI 177906 Sr7b SrTmp 11419; Red Egyptian Sr6 Sr9a 687; Rio Negro Sr9b 689; Roussalka Sr7b 979; SD4297 Sr28 11418; Suneca Sr2 Sr17 485; Victor 1 Sr5 Sr6 979.
Marker associationsTerminally located; SNP markers within 2 cM 11416. Sr8a – 2.2 cM – Xgwm459-6 A 11418.
Sr8b
SynonymSrBB
VarietiesBarleta Benvenuto 1368; Klein Titan 1368.
Varieties (alt.)Bezostaya Sr5 979; Klein Cometa Sr30 1368.
Type varietiesAccording to Luig 841 one of the genes in Leeds is Sr8b .
tv2Arrivato Sr9e Sr13 10607.
Marker associationsSr8b **–
Sr9a
SynonymSr9 687
iI Sr9a -Ra 828; Red Egyptian/10[*] Marquis 686; Sr9a/9[*] LMPG 685.
Sources / synonymsCS[*] 4/Red Egyptian 2B 1308.
Varieties (alt.)Red Egyptian Sr6 Sr8a 687; French Peace Sr7a Sr13 680; Excel Sr8a Sr17 752.
Marker associationsXbarc101-2B/Xgwm12-2B **–
Sr9b
SynonymSrKb1 468, Sr9 687
iKenya 117A/10[*] Marquis 686; Sr9b /10[*] LMPG 685.
Sources / synonymsCS[*] 7/Kenya Farmer 2B 939.
VarietiesGamenya 844; Kenya stocks 669, 1557, 687, 673, 67, 689.
Varieties (alt.)Egypt Na95 Sr7a Sr10 636; Festival Sr15 1553; Frontana Sr8a 689; Gamut Sr6 Sr11 1555; Glenlea Sr5 Sr6 heterogeneous 327; Kenora Sr15 1553; Magnif G Sr8a 689; No. 466 Sr6 Sr10 689; Pitic 62 Sr8a 33; Rio Negro Sr8a 689; Robin Sr11 879; Veadeira Sr10 687. See also 1553.
cSR9B differs from SR9H and SR9G by different single amino acids 11747.
Sr9c
NoteOriginally reserved for Sr36 , but later deleted . Sr9d 678, 831.
SynonymSr1 676, 47, 677
iHope/10[*] Marquis 677; H-44/10[*] Marquis 677; I Hope 2B-Ra 828; Sr9d/8[*] LMPG 685.
VarietiesHopps Sr2 1040.
Varieties (alt.)Lancer Sr2 Sr17 679; Scout Sr2 Sr17 679.
Type varietiesArnautka 939; Mindum 939; Spelmar 939.
Sr9e
NoteSrv 1391, Srd1v 642, SrKn 11590. TRITD2Bv1G223210 .
VarietiesLine Td31-5R PI700734 {11514, 11590}; SST 16 1324; SST 33 785; SST 66 785; SST 3R 1324; Vernstein 845.
Varieties (alt.)Combination III Sr36 841; Sunstar Sr8a Sr12 939.
Type varietiesST464-A2 10473; Svevo 11590; Vernal emmer 1391; CI 7778 845; Sr9e occurs in many tetraploid wheats {1378, 939}.
tv2Arrivato Sr8b Sr13 10607; Kronos Sr13 11590; ST464 Sr13 10473.
Marker associationsXgwm191-2B **–
Sr9f
VarietiesChinese Spring 826; Not present in the near-isogenic I Sr9a -Ra 826. Deleted 11747. The Sr9f homolog protein in CS is non-functional indicating that the gene named Sr9f in CS is not an Sr9 allele 11747.
Sr9g
Sources / synonymsCS[*] 7/Marquis 2B Sr16 965; CS[*] 4/Thatcher 2B Sr16 965.
Varieties (alt.)Celebration Sr12 Sr16 965; Eagle Sr26 842; Hochzucht Sr5 Sr12 965; Lee Sr11 Sr16 965.
Type varietiesAcme 965; Iumillo 965; Kubanka 965. See also 504.
cSR9G differs from SR9H by a single amino acid 11747.
Sr9h
SynonymSrWeb 10858, SrWLR 11485.
Chromosome2BL
VarietiesMatlabas {10058, 11486}; RL6203 11010.
Varieties (alt.)Gabo 56 CI 14035 Sr11 11010; Gabo CI 12795 Sr11 11010; Timstein CI 12347 Sr11 11010; Webster RL6201 Sr30 10858.
Marker associationsXgwm47-2B **–

SR10

Sr10
Note2B 686, 939.
iEgypt Na95/4[*] Marquis 468.
VarietiesFederation 939; Geneva 1412; Hazen 49; Kenya stocks 669, 687, 673, 670.
Varieties (alt.)Egypt Na95 Sr7a Sr9b 687; No. 466 Sr6 Sr9b 689; Red Bobs Sr7b 308.

SR11

Sr11
SynonymSr11 687, Sr12 687
Chromosome6BL
Chromosome6B
iI Sr11 -Ra 828; Lee/10[*] Marquis 686.
Sources / synonymsCS[*] 7/Kenya Farmer 6B 830; CS[*] 9/Timstein 6B 1308.
VarietiesCharter 844; Flevina 72; Gabo 687; Kenya stocks {1557, 673, 670, 844}; Sonora 64 33; Sylvia 71; Timstein {1308, 687}; Tobari 66 33; Yalta 844.
Varieties (alt.)Charter Sr9h 11177; Eurga Sr6 1553; Gamut Sr6 Sr9b 1555; Lee Sr9g Sr16 687; N.P.790 Sr5 1555; Qing-Chung 5 Sr5 Sr6 564; Robin Sr9b 879; Prospect SrWld 197; Trident Sr38 11177; See also 1553.
Marker associationsKASP6BLIWB46893 – 0.3 cM – Sr11/KASP6BLIWB10724 – 0.3 cM – KASP6BLIWB72471 11177.
A resistance gene allelic with Sr11 was found in Chinese Spring 938, but the P. graminis culture for its detection was lost.

SR12

Sr12
NoteRecessive. 3BS or centromeric region 11103, 682, 968, 1332.
Chromosome3BL
Sources / synonymsCS[*] 7/Marquis Selection 3B Sr16 1332; CS[*] 5/Thatcher 3B Sr16 1332.
VarietiesMarquillo 682; Tincurrin 939; Windebri 939.
Varieties (alt.)Condor Sr8a 11105; Celebration Sr9gSr16 939; Condor Thatcher Sr5Sr9gSr16 939; RL6058 (a Thatcher derivative) 11104; W3746 Sr7a 1371.
Postulated for several durums 1378.

SR13

Sr13b
itvIm-C2 11584; Im-7B 11584; Rusty-14803 11584.
Type varietiesBen 11584; Botno 11584; Calvin 11584; Carpio 11584; D99656 11217; D15143 11584; Joppa 11584; Kofa PI 584336{10777; 11217}; Lebsock 11584; Leeds Sr92 Sr8b 11584; Lloyd 11584; Medora PI 496260 {10777, 11217}, CItr 7777 11584; Munich 11584; ND Grano 11584; ND Riveland 11584; Pierce 11584; Rugby 11584; Sceptre {10777, 11584}; Svevo 11584; T. carthlicum PI 387696 11584; T. polonicum CItr 14803 11584; Tioga 11584; Vic 11584; Ward 11584.
cGenBank KY225226 (Resistance haplotype R2) 11217.
Sr13c
itv8155-B2 11584; 8155-C2 11584; Rusty-SR464-C1 11584; ST464-C1 {10473, 11584}.
Type varietiesAlkabo 11584; Altar 84 11584; CItr 7771 11584; D101073 11584; Langdon {11217, 11584}; PI 352548 11584; ST464 Sr9e {10473, 11584}.
cGenBank KY924305 (Resistance haplotype R3 {11217).
Sr13d
itvCAT-A1 11584.
Type varietiesCamadi Abdu Tipo #103 11584. c : MW033594 (Resistance haplotype R4 11584.
Alleles of many of the Sr13 genotypes listed under

SR14

Sr14
Chromosome1BL
iKhapstein/10[*] Marquis 686.
VarietiesLine A 933.
Varieties (alt.)Khapstein Sr7a Sr13 674.
tv2Khapli Sr13 674.

SR15

Sr15
Chromosome7AL
Chromosome7A
VarietiesPresent in stocks possessing Pm1 and Lr20 931, 1554; See Reaction to Blumeria graminis and Reaction to P. triticina .
Marker associationsAssociated with clustered markers 323.

SR16

Sr16
SynonymSrrl2 1238
2B 1308, 830. 2BL 1307.

SR17

Sr17
NoteRecessive.
Synonymsr17 964
Chromosome7B
7BL 964, 10565.

SR18

Sr18
SynonymSrMn1 1263, Srmq1 99, SrPs1 1263, SrG2 844, Srrl1 1238
Chromosome1D
iI Hope 1D-Ra 828; Sr18/8[*] LMPG 685.
Sources / synonymsCS[*] 6/Hope 1D 1308.
VarietiesPresent in the majority of wheat stocks828.
Stocks not possessing Sr18 : Brevit 54; Chinese Spring 828; Eureka 54; Federation 54; Gular 54; Kenya C6042 54; Koala 54; Little Club 828; Morocco 54; Norka 54; Prelude 828; Yalta 54.

SR19

Sr19
SynonymSrmq2 99
Chromosome2B
Chromosome2BS
VarietiesMq-B 29.
Varieties (alt.)Marquis Sr7b Sr18 Sr20 29.

SR20

Sr20
SynonymSrmq3 1238, Srrl3 1238
Chromosome2B
VarietiesMq-C 29; Rl-C 29.
Varieties (alt.)Reliance Sr5 Sr16 Sr18 29; Marquis Sr7b Sr18 Sr19 29.

SR21

Sr21
Chromosome2AL
iSr21/8[*] LMPG 685.
VarietiesCSSr21 {M10115}; Hexaploid derivatives of T. monococcum 939.
Type varietiesTetraploid derivatives of T. monococcum 939.
dvEinkorn CI2433 {1460, 11110}; Dv92 Sr35 10876; G2919 Sr35 10876; Various monococcum accessions. See also Sr45 which has similar specificity to Sr21 .
Marker associationsFD52726 **–

SR22

Sr22a
NoteSr22 1460.
Chromosome7A
Chromosome7AL
Chromosome bin7AL-0.74-0.86; 7AL-13 0.83-0.89 10869.
iMarquis[*] 4//Stewart[*] 3/ T. monococcum {649, 1460}; Sr22/9[*] LMPG 685; Others 1112.
VarietiesCS/3/Steinwedel[*] 2//Spelmar/ T. boeoticum 1460; Schomburgk 880; Steinwedel[*] 2//Spelmar/ T. boeoticum 1460; Others 1112; Recombinant line reported in {10772, 10773}.
Type varietiesSpelmar/ T. boeoticum 1460; Stewart[*] 6/ T. monococcum RL 5244 649.
dvVarious T. monococcum accessions {649, 1460}.
Marker associationsHexaploid derivatives with Sr22a carried 'alien' segments of varying lengths; the shortest segment was distal to Xpsr129-7A 1112; See also158; Xcfa2123-7A 6 cM Sr22 **–
Sr22b
NoteSrTm5 11208. 7A[m] L 11208.
dvT. monococcum ssp. monococcum PI 277131-2 Sr21 Sr22b Sr60 {11208, 11385}; PI 306540 Sr21 Sr22b Sr60 SrTm4 {11208, 11385}.
iPI 306540 (2x)/Kronos (4x)//Clear White (6x)///*3 Fielder 11514; PI 700735 11514.
Marker associationsSrTm5/IWB25012/IWB44281/IWB405527/Sr22GMF/GMR – 0.8 cM – IWB6942 11208; pkw4995 (RefSeq v1.1 TraesCS7A02G499500 ) - 0.04 cM – SrTm5 – 0.04 cM- pkw4999 (RefSeq v1.1 TraesCS7A02G499900 ) 11514.
cSr22b has an insertion of a large (13.8-kb) retrotransposon in its second intron 11514.The predicted Sr22b NLR protein is 95.7 to 96.7% identical to proteins translated
from six Sr22a resistant haplotypes 11514. Allelism of Sr22a and Sr22b was based on more than 2,200 gametes 11514.

SR23

Sr23
NoteThe following chromosome locations are consistant with the finding that the first location was based on Rescue monosomics. Rescue differs from CS by a 2B-4B reciprocal translocation 939.
Chromosome2BS
Chromosome4B
VarietiesExchange 950; Warden 950; Sr23 is always associated with Lr16 950.
Varieties (alt.)Etoile de Choisy Sr29 950.

SR24

Sr24
NoteDerived from Thin. elongatum . 3DL = T
Chromosome3DS
3DL-3Ae#1L {389, 956}.

SR25

Sr25
NoteDerived from Thin. elongatum . 7DL = T
Chromosome7DS
7DL-7Ae#1L {388, 657, 291, 956}.

SR26

Sr26
NoteDerived from Thin. elongatum . 6AL 364 = T
Chromosome6AS
6AL-6Ae#1L 389, 388.

SR27

Sr27
NoteDerived from S. cereale . 3A (T3A-3R) = T
Chromosome3AS
3R#1S 389, 10162, 896, 3.

SR28

Sr28
Chromosome2BL
iLine AD 932.
VarietiesSD 1691, CI 12499 11148.
Varieties (alt.)Kota Sr7b Sr18 932; SD4297 Sr8a 11419.
Marker associationsXwmc332 – 1.4 cM – Sr28 – 6.0 cM – wPt-700711148; Sr28 – 1.6 cM – wPt-7004 11148; Sr28 – 0.6 cM – wPt-7004 11148.
Although 11149 concluded that Sr28 was present in VL404 and Janz it is more likely that the gene described is the linked gene Sr9h . The Sr28 allele in SD4297 was originally reported as Sr9h 11418.

SR29

Sr29
SynonymSrEC 955
Chromosome6DL
Chromosome6DS
iPrelude/8[*] Marquis//Etoile de Choisy 313.
VarietiesHana 71; Hela 76; Mara 68; Slavia 76; Vala 76.
Varieties (alt.)Etoile de Choisy Sr23 955.

SR30

Sr30
SynonymSrW
Chromosome5DL
iSr30/7[*] LMPG - Lines 1, 2, and 3 685.
VarietiesFestiguay 688; Mediterranean W1728 1369; Webster 688.
Varieties (alt.)HD2009 Sr2 10632; Klein Cometa Sr8b 1368;
Relatively common in Australian and Mexican wheats. Various unnamed accessions 208, 1321.

SR31

Sr31
NoteDerived from S. cereale cv. Petkus. See also Reaction to P. striiformis, Yr9 : Reaction to P. triticina, Lr26 1B = T
Chromosome1BL
1RS = T1BL.1R#1S 389 or 1R(1B).

SR32

Sr32
NoteDerived from Ae. speltoides . 2A 939, 1304 = T
Chromosome2AL
2S#1L-2S#1S 389.

SR33

Sr33
SynonymSrSQ 650
Chromosome1DS
Chromosome1DL
VarietiesRL 5405 = Tetra Canthatch/ Aegilops squarrosa RL 5288 650.
dvAe. tauschii PI 603225 11012; TOWWC0153 = TA2466 11685.
Marker associationslinked with Gli-D1 ; Xmwg60-1D **–

SR34

Sr34
NoteDerived from Ae. comosa . 2A 967 = T2AS-2M#
Chromosome1L
2M#1S 389

SR35

Sr35
SynonymSrTm1 1522
Chromosome3AL
Chromosome bin3AL8 0.85-1.00.
iMarquis*5/G2919 10876. v,tv: Tetraploid and hexaploid derivatives of T. monococcum 957.
dvDV92 Sr21 10876; G2919 Sr21 10876; T. monococcum C69. 69 Selection 957; G2919 957.
Marker associationsSr35 was mapped to a 5.1 cM interval between XBF483299 and XCJ656351 in diploid wheat10712; Mapped in diploid wheat to a 2.2-3.1 cM region between Xbf483299 and XCJ656351 and corresponding to a 174 bp region in Brachypodium 10876.
cSr35 is a CC-NBS-LRR gene 10988.
Sr35 was postulated in 21 accessions of T. monococcum subsp. monococcum 11288.

SR36

Sr36
SynonymSrTt1 949
Chromosome2BS
iSr36/8[*] LMPG 685.
VarietiesArthur 939; Arthur 71 1324; Flemink 1324; GK Kincso 235; Gouritz 1324; Idaed 59; Maris Fundin 70; Mengavi 949; SST 101 1324; SST 107785; Timvera 949; T. timopheevii derivatives 949; Zaragoza785; Others {572, 10609}.
Varieties (alt.)Bass Sr26 1450; Combination III Sr9e 939; Timson Sr5 Sr6 939.
Type varietiesT. Timopheevii 949.
Marker associationsXgwm42 **–

Sr37

Sr37
SynonymSrTt2 949
Chromosome4BL
v,tv: T. timopheevii and derivatives 949, 484; Line W 949.

SR38

Sr38
NoteDerived from Ae. ventricosa .
Chromosome2AS
6M[v ] = 2MS-6MS.6ML or 2MS-6ML.6MS 0009.

SR39

Sr39
NoteDerived from Ae. speltoides . = 2SL-2SS#2.2SL#2 11037.
Chromosome2B
VarietiesRL 5711 651, 646.
Type varietiesAmphiploid RL 5347 = Ae. speltoides / T. monococcum 651.
Marker associationsSr39 is closely linked with Lr35 651; A SCAR marker was developed 9923.
Lines with shortened alien segments are reported in 10741. Although Sr39 produces similar responses to Sr32 , also derived from Ae. speltoides , recombination studies based on three crosses showed independent inheritance 646. Sr39 segregated independently of Lr13 651. Sr39 may be present in DAS15 in combination with Sr47 . A Ti2BL.2BS-2SS-2BS translocation 10872 separated from Sr47 in DAS15 could contain Sr39 - see SrAEs7t . Further lines with shortened segments are described in 11037 along with tightly linked co-dominant STS markers.

SR40

Sr40
NoteDerived from T. araraticum . 2BS 302 = T2BL/2G#
Chromosome2S
iRL 6087 = RL 6071[*] 7/PGR 6126; RL 6088 = RL 6071[*] 7/PGR 6195 302.
Type varietiesT. araraticum PGR 6126 302; PGR 6195 302.
Marker associationsXwmc661-2B **–

SR41

Sr41
Chromosome4D
VarietiesWDR-B1 1214.
Varieties (alt.)Waldron Sr5 (heterogeneous) Sr11 (heterogeneous) 1215.

SR42

Sr42
Chromosome6DS
VarietiesPI595667 11087.
Varieties (alt.)Norin 40 Sr54 938; PI410954 Sr24 11087.
Marker associationsXcfd49-6D **–

SR43

Sr43
NoteDerived from Th. elongatum . 7DS-7el
Chromosome2S
7el2L 11076. 7D. 7DL = T7DL-7Ae#2L.7Ae#2S 389, 657.

SR44

Sr44
NoteDerived from Th. intermedium . T7DS-7J#
Chromosome1L
7J#S 7J#1L 389.

SR45

Sr45
SynonymSrD 934, SrX
Chromosome1D
Chromosome1DS
Varieties87M66-2-1 894; 87M66-5- 6 897; Thatcher + Lr21 , RL5406 894, 934; Various backcross derivatives developed at PBI Cobbitty1461.
dvAe. tauschii RL5289 {894, 934}.
suCS1D5406 11134.
Marker associationsXgwm1061D/BE44426 – 1.82 cM – Sr45 – 0.39 cM – csssu45/Af45 11134.
c. Sr45 encodes a 1,230 aa CC-NBSLRR protein 11213. NCBI LN883757.
Tests of natural and induced mutants of P. graminis f. sp. tritici indicated that Sr45 had identical specificity to Sr21 934. One race distinguishing Sr45 and Sr21 is reported in 11134. Cloning of both SR45 and SR21 showed that the genes were different.

SR46

Sr46
Chromosome2DS
Chromosome bin2DS5-0.47-1.00.
VarietiesL-18913 / Meering selections R9.3 10538; R11.4 10538; R14.2 10538.
Varieties (alt.)L-18913 = Synthetic Langdon / Ae. tauschii var. meyeri AUS 18913 Sr9e 10538.
dvAe. tauschii var. meyeri AUS18913 10538 = CIae 25 11268; Ae. tauschii TA1703 11268.
Marker associationsCo-segregation with RFLP Xpsr649-2DS at both the diploid and hexaploid levels 10538; A PCR-based marker, csSC46 was developed from a BAC clone containing Xpsr649 10538. Xgwm210-2D – 3.9 cM – Sr46 – 5.6 cM – Xcfd36-2D – 0.3 cM – Xwmc111-2D 11268.
madvFlanked by Xgwm1099-2D and Xbarc297-2D 11405.
cCloned by AgRenSeq and map-based methods Sr46 has a CC-NBS-LRR structure 11405. GenBank MG851023. Sr46 was more effective at higher temperatures in laboratory tests 11268.
Sr47
NoteDerived from Ae. speltoides.
Chromosome2BS
2B = 2BL-2SL-2BL.2BS 10549.

SR48

Sr48
SynonymSrAn1 10565
Chromosome2DS
Chromosome2AL
Chromosome bin2AL1-0.85-1.00 10564.
VarietiesArina {10564, 10511, 10565}.
Varieties (alt.)Arina Sr56 AUS 91457 10851.
Marker associationsXgwm382-2AL **–

SR49

Sr49
Chromosome5BL
VarietiesMahmoudi AUS 28011 10704.
Marker associationssun479 **–

SR50

Sr50
SynonymSrR 377
Chromosome1DS
adCS + Imperial 1R 377.
VarietiesLine T6-1 AUS 91434 10745. T1DL.1RS-DR.A1 11316.
alS. cereale cv. Imperial.
Marker associationsLine T6-1 retains the rye marker AW2-5 10745.
cGenBank KT725812, 3,508 bp. Sr50 encodes a CC-NBS-LRR protein homologous to the barley Mla gene 11316. GenBank KT725812. In rye Sr50 may be allelic with Sr31 ; however in wheat they can be regarded as separate loci Sr50 is located in a small interstitial segment not detected by GISH. Line T6-1 lacks the Sec-1 allele from rye 10745.

Sr51

Sr51
NoteHomoeologous group 3 10803; 3S[S] S 10803 3A (
Chromosome3AL
3S[S] S 10803.

SR52

Sr52
Note6A (
Chromosome6AS
6V#3L) 10774.

SR53

Sr53
NoteDerived from Ae. geniculata
Chromosome5D
T5DS5DL-5M[g] L-5DL 10789.

SR54

Sr54
Chromosome2DL
Varieties (alt.)Norin 40 Sr42 10816.
Marker associationsXcfd-283-2D **–

SR55

Sr55
NoteAdult plant resistance
Chromosome4DL
Chromosome binDistal to break point 0.56 FL10678.
iRL6077=Thatcher*6/PI 250413 {10847, 10678}.
VarietiesChapingo 48 11070.
Marker associationsPleiotropic of closely linked with Lr67 and Yr46 and associated with Xgwm165-4D and Xgwm192-4DL 10847,10678.
cThis multiple disease resistance locus was identified as a hexose transporter most similar to the STP13 family and containing 12 predicted transmembrane helices 11070.
Sr55 is pleiotropic or closely linked with Lr67 , Yr46 , Pm46 and Ltn3 .

SR56

Sr56
NoteAdult plant resistance
SynonymQSr.sun-5BL 10565
Chromosome5BL
Chromosome bin5BL1600.79-1.00.
VarietiesAF533 10851.
Varieties (alt.)Arina Sr48 AUS 91457 138.
Marker associationsXsun209 (SSR) – 2.6 cM – Sr56 – 1.2 cM – Xsun320 (STS from wPt-7665) 10851.
In the earlier QTL analysis of an Arina/Forno population QSr.sun-5BL accounted for 12% of the PVE 10565. In the present study of an Arina/Yitpi RIL population stem rust response segregated as a single gene. The response phenotype was 40-50 MS-S.

SR57

Sr57
NoteAdult plant resistance.
Chromosome7DS
Chromosome bin7DS4.
suLalbahadur(Perula7D) GID 5348503 and GID 5348496 {10648, 10861}.
VarietiesChinese Spring 10861; Wheat accessions with Pm38/Lr34/Yr18 , see Reaction to Blumeria graminis , Reaction to Puccinia striiformis , Reaction to Puccinia triticina , Leaf tip necrosis.
Marker associationsSee Reaction to Puccinia triticina .
cPutative ABC transporter10648.
Further evidence for the effects of this gene on stem rust response can be found in 299, 10565, 10733, 10863, 10864, 10865, 10866.

SR58

Sr58
Chromosome1BL
VarietiesLr46 Deletion Mutant 109 (GID 5349718) 10965; Lr46 Deletion Mutant 111 (GID 5349716) 10965.
suLalbahadur(Pavon 1B) (GID 519245) 10965.

SR59

Sr59
NoteDerived from Scale cereale 2D (T
Chromosome2DS
2RL) 11066.

SR60

Sr60
Note5A[m] S 11208.
dvPI 277130 11385; PI 277131-2 11385; PI 277135 11385; PI 306540 11385; PI 306545 11385; PI 306547 11385; PI 428158 11385; PI 435001 11385.
dv2PI 306540 Sr21 SrTm4 SrTm5 11208.
VarietiesPI 689563, PI 306540/Kronos/2/UC1361/4UC1201436 11385.
Marker associationsPinb-5A[m] S …… GH724575/DK22976/CA5012332 – 0.25 cM – Sr60/LRRK123.1 – 0.19 cM – CJ942731/CJ884584 11208; GH724575 – 1.56 cM – Sr60/ LRRK123.1 – 0.52 cM – FD475316 11208. Sr60F2R2 11385.
cSr60 from T. monococcum PI 306540 encodes a 724 amino acid protein with two putative kinase domains designated Wheat Tandem Kinase 2 ( WTK2 ) 11208,11385. GenBank MK629715 11385. The gene is orthologous to T. aestivum gene TraesCS5A02G005400 11385. Sr60 in UC12014-36+Sr60 (PI 689563) is linked with puroindoline genes for grain softness that were also introgressed from the diploid parent 11385.

SR61

Sr61
NoteSrB 11337. Derived from Th. ponticum 11397}. 6A = T
Chromosome6AS
6AL-6Ae#1-6Ae#3 19018; 6Ae#3 11338.

SR62

Sr62
NoteSr1644-1Sh 11519. 1BS = T1S[Sh] S.1S[Sh] L-
Chromosome1BL
VarietiesZahir*4 / Ae. sharonensis AS_1644, JIC DPRM0081 11524.
Marker associationsMapped in Ae sharonensis to a 480 kb interval on chr arm 1[Sh] S 11519.
cCloned from Ae. sharonensis and validated in transformed wheat. Sr62 is tandom kinase with both domains required for function 11524. Sr62 has a kinase-pseudokinse (tandom kinase) structure with both components required for resistance function, 740 amino acids 11524. GenBank MZ826707.
1DS (T1S[Sh] S.1S[Sh] L-1DL).

SR63

Sr63
NoteAdult plant resistance. QSrGH.cs-2AL 11554.
Chromosome2AL
Type varietiesGH/M14 RIL49 XXXXX 11554; GH/M14 RIL188 AUSXXXX 11554.
tv2Glossy Huguenot Sr58 (syn QSrGH.cs1BL ) AUS2499 11554.
Marker associationsIWA200-KASP32429 – 2.7 cM – Sr63 – 3.0 cM – IWB4881-_ 2AL 11554.

SR64

SR64
NoteDerived from Thinopyrum . 4D = T4DL·4J[S] S 10788.
VarietiesKS93WGRC27 404; Mace (PI 651043) 11681. 4D = T4DL·4DS-4J[S] S 11644.
iLine E*6/rec213 ( Sr64, Wsm1 ) = GSTR 527 {11644, https://npgsweb.ars-grin.gov/gringlobal/accessiondetail?id=2158211}.
VarietiesKS08WGGRC50 {11644, 10788}.
Marker associationsKASP markers developed in 11643.

SR65

Sr65
NoteSrH2 11682.
Chromosome1AS
VarietiesHango-2 FLW6-Selection AGG95499WHEA 11682.
Marker associationsKASP7944/ KASP11804 (2,3 Mb, CS REfSeq 2,1) – 2.6 cM – SR65 – 2.0 cM – KASP12147 / KASP21832 / sunCS265 11682. CHS21_002378110 bp, respectively.

Temporay designations

SrA
VarietiesSW55-1 323; SW56-1 323.
Varieties (alt.)SW33-5 Sr9a Sr13 323; SW54-3 Sr9d Sr13 323.
SrAes7t
Note2BS = T
Chromosome2B
2BS-2SS-2BS 10872.
SrCad
Chromosome6DS
VarietiesAC Cadillac 10733; AC Crystal 10733; AC Foremost 10733; AC Karma 10733; AC Taber 10733; AC2000 10733; Peace 10733; 5700 10733.
Marker associationsLines with Bt10 10733; Xcfd49-6D **–
SrND643
Chromosome4AL
Chromosome bin4AL4-0.8-1.00.
VarietiesKenya Sunbird 11092; Kenya Tai 11092; ND643/2*Weebill1 GID6302736 11092.
Type varietiesND643 11092.
Marker associationsXwmc776-4A **–
SrPan3161
Chromosome4DS
VarietiesTugela 11722.
Varieties (alt.)PAN 3161 Sr57/Lr34 11722.
Marker associationsRHT-D1 – 12.8 cM – Xwmc-720-4D 1.8 cM – SRPan3161 – 1.8 cM – Xgpc8038Xwmc52/Xgpc7414/Xcfd23/Xpsp3103-4D 11722.
SrPI94701
Chromosome5BL
Type varietiesPI 94701 11780.
Marker associationsMapped to a 0.17 cM region flanked by pku69124 and pku69228 and corresponding to 1.04 and 2.15 Mb in the Svevo REfSeq 1.0 and CSRefSeq 2 genomes 11780.
SrPI410966
VarietiesPI 410966 11180.
The marker profile for this gene was very similar to that of a line with Sr36 {11180, 10825}. Specificity tests were not reported.
SrTA10276-2V
Chromosome2V
adTA7753 11395.
alD. villosum TA10276 11395.
SrTm4
NoteReccessive. 2A[m] L 11111.
dvMonogenic line TmS4-260 11673.
dv2T. monococcum PI306540 Sr21 Sr22b Sr60 {11111, 11673}. bin/contig: IWGS2ALcontig6401556.
Marker associationsBQ461276 **–
SrTmp
NoteSrSha7 11057; SrA2K 11691; QSr.nc.
Chromosome6D
Chromosome6DS
VarietiesAGS2000 11691; Bai-Yu-Bao 564; Beijing 9 564; Beijing 11 564; Digalu {11132, 11057}; Ember 11152; Fertodi 293 977; Guard-1 11152; Kenya Robin {11152, 11057}; KS91WGRC11 {M22059}. Martonvasari 5 977; Mironovska = Mironovskaya 808 {68, 977}; Morvarid 11132; Nung-Ta 139 564; Overland 11152; Parker 977; Ripper 11132; Shield 11152; Trison 1230; Triumph 64 {1230, 841, 977}; Xuzhou 14 564; Yen-An 15 564.
Varieties (alt.)Beijing 10 Sr5 564; PI 177906 Sr7b Sr28 11419; MD01W28-08-11 Sr31 11691.
Marker associationsSrTmp – 3.1 cM – IWB49086 11419. The possibility of this gene being present in a number of South African cultivars, including Betta = Klein Impacto, is discussed in 10941.
SrWld
Varieties (alt.)Prospect Sr11 197.
SrZdar
Chromosome1B
VarietiesZdar 67.
Sr1RS[Amigo ] 10845. 1AS (T1AL.1RS) 389, 1624.
Sr8155B1
NoteRecessive.
Chromosome6AS
VarietiesChoteau / Mountrail Der. SXD 43 PI 681713 11580; Marruecos*2/CItr 8155 11580.
Type varietiesAlkabo 11580}; Renville 11580.
tv2Grenora Sr13 11580; Munich Sr13 11580.
Marker associationsCo-segregation with KASP6ASIWB10558 11580. Also predicted in durum accessions Belzer, Dilse, Lloyd, Divide and Montrail 11580.
Sr10171
Chromosome7DS
VarietiesGenetic stock to be designated 10936.
dvAe. tauschii TA10171 10936.
Marker associationsSr10171 **–
Sr10187
SynonymSrTA10187 11181
Chromosome6DS
VarietiesGenetic stock to be designated 10936.
dvAe. tauschii TA10187 10936.
Marker associationsXcfd49-6D **–
Sr10526
Chromosome6DS
VarietiesCItr 105026 11249.
Marker associationsIWB36391/IWB34477 – 2.9 cM – Sr15026 – 3.0 cM – IWA4000 11249; IWB36391 – 0.4 cM – IWB262 – 2.6 cM – Sr15026 – 1.3 cM – IWB49086 11249.
Sr10526 was detected with races QFCSC and TTTTF. When the same DH and RIL populations were tested with race TRTTF there was evidence for complementary resistance genes on chromosomes 6DS and 6AS, one of which was Sr10526 . When the populations were tested in the field in Kenya with Ug99 races QSr.abr-6AS.1 (R[2] = 0.1 – 0.3) was detected 11249. Th. ponticum -derived, stem rust resistant line WTT34 with a T5DS.5DL-Th chromosome pair is reported in 11783. Additional temporary designations are listed in 1230. Genotype lists: 323, 970, 10270, 10511, 10697. Complex genotypes: AC Taber: Sr2, Sr9b, Sr11, Sr12 9905. Centurk: Sr5 979, Sr6 979, Sr8a, Sr9a 979, Sr17 979. Chris: Sr5 679, 1371, Sr7a 1371, Sr9g 1371, Sr12 1371. Egret: Sr5 939, Sr8a 939, Sr9b 939, Sr12 939. FKN: Sr2, Sr6, Sr7a, Sr8a 791, Sr9b 791. H-44: Sr2, Sr7b 677, Sr9d 677, Sr17 . Hartog: Sr2 127, Sr8a, Sr9g, Sr12 939. Hope: Sr2 677, Sr7b 677, Sr9d 677, Sr17 . Kenya Plume: Sr2 1370, Sr5 1370, Sr6 1370, Sr7a 1370, Sr9b 1370, Sr12 1370 Sr17 1370. Khapstein: Sr2, Sr7a, Sr13 674, Sr14 674. Lawrence: Sr2, Sr7b 939, Sr9d, Sr17 . Lerma Rojo 64: Sr2, Sr6, Sr7b 979, Sr9a 979. Madden: Sr2, Sr9b, Sr11, Sr13 842. Manitou: Sr5 679, Sr6 679, Sr7a, Sr9g 965, Sr12 939. Mendos: Sr7a 939, Sr11 879, Sr17, Sr36 . Pasqua: Sr5, Sr6, Sr7a, Sr9b, Sr12 . Gene Lr34 acted as an enhancer of APR 9905. PI 362698: Sr5, Sr8a, Sr12, Sr15?, Sr16 11347. PI 362698: Sr5, Sr8a, Sr12, Sr15?, Sr16 11347. PI 60599: Sr7a 689, Sr8a, Sr9b, Sr10 . Redman: Sr2, Sr7b 939, Sr9d 939, Sr17 . Reliance: Sr5 1308, Sr16 1238, Sr18 , Sr20 . Renown: Sr2, Sr7b 939, Sr9d 939, Sr17 . Roblin: Sr5, Sr7a? Sr11, Sr12. Selkirk: Sr2 499, Sr6 468, Sr7b 499, Sr17, Sr23 950. Thatcher: Sr5 1308, Sr9g 965, Sr12 939, Sr16 1308. Timgalen: Sr5 (heterogeneous) 1555, Sr6 1555, Sr8a, Sr36 . WW15 = Anza = Karamu = T4: Sr5 939, Sr8a 939, Sr9b 939, Sr12 939. QTL Arina / Forno: Qsr.sun-5BL 10565; resistance contributed by Arina, associated with Xglk356-5B , R[2] = 11-12% 10565. Qsr.sun-7DS 10565; resistance contributed by Forno, associated with markers XcsLV34 and Xswm10 diagnostic for Lr34/Yr18 10565. Avocet S / Pavon 76: RIL population of lines lacking Sr26 :Five QTLs, QSr.cim-3B(Sr2), QSr.cim1B(Lr46/Yr29/Pm39 region) and QSr.cim-3D (R[2] =0.2) from Pavon 76; QSr.cim-4B and QSr.cim-5A from Avocet S 10975. Carberry (Resistant in Canada) / AC Cadillac (Resistant in Canada and Kenya): DH population: QTLs effective in Kenya were located in chromosomes 2B, 5B, 7B and 7D, those effective in Canada were on 3B ( Sr2 ), 5A and 5B; those effective in Kenya and Canada were on 4B and 6D ( Sr2 ); both parents had Lr34/Sr51 11040 HD2009 / WL711: RILs: Three of several QTLs gave consistent effects across environments, viz. QSr.sun-3BS , R[2] = 0.09-0.15, probably Sr2, QSr.sun-5DL , R[2] = 0.2-0.44, probably Sr30 , and QSr.sun-7A , R[2] = 0.07-0.13, nearest marker wPT-4515 10632. PBW343 (S) / Muu (I): RIL population:4 consistent QTLs were identified, QSr.cim-2BS, QSr.cim3BS(Sr2) and Sr.cim-7AS from Muu, and QSr.cim-5BL from PBW343 11019. RL6071 / RL6058(R): RIL population: RL6058, a Tc backcross line with Lr34/Sr57 is more resistant than Tc. Enhancement of resistance in both Kenya and North America was attributed to a QTL in the region wPt5044 Xgwm-2B in chromosome 2BL 10902. Spark / Rialto: DH population: Sr5 and Sr31 were derived from Rialto and QDr.sun-3BS ( Xgwm10343BBS00010945 region and QSR.sun-5A ( Xgwm445-5A – Xgwm205-5A region) were derived from Spark 11231.

Suppressor of Stem Rust Resistance 1

SuSr-D1
Chromosome7DL
VarietiesCanthatch CTH-K RL5451 11411; Columbus 11417; Katepwa 11417. Other Canadian Thatcher derivatives 11417.
Marker associationsLocalised to a 1.3 cM genetic interval flanked by Xkwh239 and Xkwh281 11412.
cTraesCS7D01G526100 . Encodes a mutant form of TaMed15b.D , a subunit of the Medicator complex 11412.

3.21. Reaction to Puccinia striiformis Westend.⌂ Home

Disease: Stripe rust, yellow rust.

YR1

Yr1
SynonymL 1622
Chromosome2AL
2A 1610, 877.

YR2

Yr2
NoteRecessive 1351.
SynonymU 1622
7B 184, 746, 186.

YR3

Yr3a
Note1B 184, 185.
Chromosome2B
Chromosome5BL
iTaichung 29*6/Vilmorin 23 10370.
VarietiesBon Fermier 1431; Nudif TP1 1431; Stephens 184,182; Vilmorin 23 10370.
Varieties (alt.)Argent Yr1 Yr4a Yr6 1067; Cappelle-Desprez Yr4a 851; Druchamp Yr4a ; Hobbit Yr4a Yr14 604; Kinsman Yr4a Yr6 604; Mardler Yr1 Yr2 Yr4a Yr13 1459; Maris Huntsman Yr2 Yr4a Yr13 604; Maris Freeman Yr4a Yr6 604; Maris Ranger Yr4a Yr6 604; Nord Desprez Yr4a 184, 182; Top Yr4a 230; Viginta Yr2 Yr4a ; Yamhill Yr2 Yr4a 182; Zdar Yr4a {71, 73}.
Marker associationsYr3 (YrV23) – Xwmc3562B , 9.4 cM 10370.
Yr3b
NoteChen and Line 182 found that a second gene in Hybrid 46 - presumably this gene was not located at the Yr3 locus.
Varieties (alt.)Hybrid 46 Yr4b 851.
Yr3c
Chromosome1B
VarietiesMinister 184, 182, 851.
Varieties (alt.)Cleo Yr2 1430; Maris Beacon Yr2 Yr4b 1459.
Undesignated allele. v: Enkoy 50; Vilmorin 23; Staring 1430.

YR4

Yr4
Yr4a
Note6B 184, 185.
VarietiesVilmorin 23 184.
Varieties (alt.)Argent Yr1 Yr3a Yr6 1067; CappelleDesprez Yr3a 851; Druchamp Yr3a 182; Hobbit Yr3a Yr14 604; Huntsman Yr2 Yr3a Yr13 604; Kinsman Yr3a Yr6 604; Maris Ranger Yr3a Yr6 604; Maris Freeman Yr3a Yr6 604; Mardler Yr1 Yr2 Yr3a Yr13 1459; Nord Desprez Yr3a 182; Top Yr3a 230; Viginta Yr2 Yr3a 71,73; Yamhill Yr2 Yr3a ; Zdar Yr3a 71, 73.
Yr4b
Chromosome6B
VarietiesAvalon 1160; Opal 1431; Staring 1430.
Varieties (alt.)Hybrid 46 Yr3b ; Maris Beacon Yr2 Yr3b {1459, 1160}; Nudif TP12 Yr3c 1431; Stella Yr2 1430. Undesignated allele. [ YrRub 10720]. 3BS 10720.

YR6

Yr6
SynonymB 1622
Chromosome7B
Chromosome7BS
iAVS+Yr6 970.
VarietiesAusterlitz 230; Fielder 181; Heines Kolben 1622; Koga II 746; Maris Dove 604; Recital 230; Takari 368.
Varieties (alt.)Argent Yr1 Yr3a Yr4a 1067; Avocet (UK) Yr1 Yr2 1459; Cadenza Yr7 11187; Flamingo Yr2 1430; Heines Peko Yr2 {746, 877}; Kinsman Yr3a Yr4a 604; Kolben Yr2 611; Longbow Yr1 Yr2 {1459, 83}; Maris Freeman Yr3a Yr4a 604; Maris Ranger Yr3a Yr4a 604; Mithras Yr1 Yr2 1459; Norman Yr2 {1459, 83}; Nudif TP241 Yr7 1431; Nudif TP250 Yr1 1431; Orca Yr3c 1431; Pavon 76 Yr7 284; Penjamo 62 (heterogeneous) Yr18 1562.
Type varietiesDuilio 192; Latino 192; Norba 192; Quadruro 192; Rodeo (heterogeneous) 192.
Marker associationsXgwm577-7BYr6 , <0.4 cM 11187; Narrowed to an ~60 kb region including Xgwm577 11188; Given the location of Xgwm577 the gene location should be 7BL.
YR7
TraesCS2B01G488000 Allelism with YR5a and YRSP is reported in 10759 but cloning indicated that YR7 is not allelic with YR5a and YrSP ( Sr5b ) 11351.
Yr7
NoteAllelic with Yr5a and YrSp 10759 2B 1429, 612.
Chromosome2BL
iAVS+Yr7 970; Taichung 29*6/Lee 10371.
VarietiesPresent in many hexaploid wheats with Sr9g – see 965; Brock 83; Lee 877; Nudif TP257 1431; PBW12 1352; Paragon 11351. Prinqual 230; Renard 83; Talent 230; Tango 230; Tommy 83; WL2265 1352.
Varieties (alt.)Cadenza Yr6 11187; Donata Yr9 1430; Flevina Yr2 1431; Garant Yr2 230; Hardi Yr2 230; Lely Yr2 1430; Nudif TP241 Yr6 1431; Pakistan 81 = Veery#5 Yr9 284; Pavon 76 Yr6 284; Reichersberg 42 Yr25 10; Thatcher 965.
Type varietiesIumillo 965; but not present Acme and Kubanka which also carry Sr9g 965.
Marker associationsYr7 – Xgwm526-2B , 5.3 cM 10371; Xwmc175A-2BYr7 , <0.4 cM 11187.
cYr7 (Genbank MN273771) along with Yr5a and YrSP has a BED-LRR structure lacking a CC-domain 11351.

YR8

Yr8
NoteDerived from Ae. comosa . 2D = T2D-2M 1218 = T2DS-2M#
Chromosome1L
2M#1S 389.

YR9

Yr9
NoteDerived from S. cereale . See also Reaction to P. graminis, Sr31 : Reaction to P. triticina Lr26 1B=
Chromosome1BL
Chromosome1RS
iAVS+Yr9 970.
VarietiesAlmus 998; Aurora 1623.
Chromosome status not specified Baron 83; Benno 998; Bezostaya II 998; Branka 71; Clement {1532, 1430}; Cougar 0267; Danubia 68; GR876 753; Hammer 83; Iris 68; Kavkaz 1623; Kromerzhizhskaya 1149; Lyutestsens 15 1149; Lovrin 10 998; Lovrin 13 998; Mildress 1027; Perseus 998; Predgornaya 998; Rawhide (heterogeneous) 0267; Riebesel 47/51{878, 1623}; Roxana 68; Sabina 68; Salmon 998; Sarhad 82 284; Selekta 68; Shtorm 1149; Skorospelka 35 998; Sleipner 10038; Solaris 68; St 2153/63 997; Stuart 83; Veery 986; Weique 1627; Winnetou 998; Weihenstephan 1007/53 1623.
YR10
TraesCS1B03G0003500 , TraesCS1B03G0003600 (CS RefSeq 2.1)
Yr10
SynonymYrVav 0262
Chromosome1BS
Chromosome1B
iAVS+Yr10 970.
VarietiesAC Radiant 11167; Crest 11304; Jacmar 11145; Moro 878; PI 178383 878; QLD709 = Janz[*] 2/ T. vavilovii 0262; T. spelta 415 641; T. vavilovii AUS 22498 0262; 10 Chinese cultivars 11304.
Marker associationsA SCAR marker was described in 0261; QLD709 and T. spelta 415, both with white glumes, failed to amplify the SCAR sequence, but both carried unique alleles at the Gli-B1 and Xpsp3000-1B loci 0262. These differed from the Moro source of Yr10 . Yr10 – 1.5 cM – Gli-B1 – 1.1 cM – Xpsp3000-1B 0261; Yr10 – 1.2 cM – Xpsp3000 – 4.0 cM – Gli-B1 321; Cosegregation between a RGA marker RgaYr10a and Yr10 was reported in 0376. Yr10/Xsdauw79 – 0.2 cM – Xsdauw78 – 1.0 cM – Yr10CG – 2.1 cM – Xsdauw75 – 0.5 cM – Xpsp3000-1B 11304.
cYr10 has a CC-NBS-LRR structure. GenBank AF149112 11145. AF149112 ( Yr10CG ), TraesCS1B03G0000200, shown not to be the candidate gene 11304.
YrNAM
cA gene named YrNAM located 1.2 cM from ‘ YrCG ’, the original allegedly claimed Yr10 , but with common specificity, encoded an NLR with 5’ NAM and 3’ ZNF0BED domains 11692. YrCG was confirmed as Yr10 {11763). GenBank OP490604.

YR11

Yr11
NoteAdult plant resistance.
SynonymR11 1157
VarietiesJoss Cambier 606.
Varieties (alt.)Heines VII Yr2 Yr25 see 970.
Yr12
NoteAdult plant resistance.
SynonymR12 1157
VarietiesFleurus 1158; Frontier 1159; Pride 1157.
Varieties (alt.)Armada Yr3a Yr4a {81, 1160}; Mega Yr3a Yr4a {1160, 1157}.
VarietiesWaggoner Yr3a Yr4a Yr6 1158.

YR13

Yr13
NoteAdult plant resistance.
SynonymR13 1157
Varieties (alt.)Bounty Yr1 Yr3a Yr4a 1459; Brigand Yr2 Yr3a Yr4a Yr14 609; Copain Yr3a Yr4a 1158; Gawain Yr2 Yr3a Yr4a Yr14 81; Guardian Yr2 82; Hustler Yr1 Yr2 Yr3a Yr4a {1459, 83}; Kinsman Yr3a Yr4a Yr6 1459; Mardler Yr1 Yr2 Yr3a Yr4a 1459; Maris Huntsman Yr2 Yr3a Yr4a {1459, 83, 604}; Maris Nimrod Yr2 Yr3a Yr4a {1459, 607, 1157}; Marksman Yr1 {heterogeneous} Yr2 Yr3a Yr4a 1459; Pageant Yr2 Yr3a Yr4a 82; Professor Marchal Yr2 Yr3a Yr4a 607; Sportsman Yr1 Yr3a Yr4a 1459; Virtue Yr1 Yr3a Yr4a {1158, 1459, 83}.

YR14

Yr14
NoteAdult plant resistance.
SynonymR14 1157
VarietiesKador 1158; Score 1157; Wembley 610.
Varieties (alt.)Avalon Yr3b Yr4b {1459, 83}; Brigand Yr2 Yr3a Yr4a Yr13 {1459, 83, 609}; Galahad Yr1 Yr2 (heterogeneous) Yr3a Yr4a {1459, 83}; Gawain Yr2 Yr3a Yr4a Yr13 81; Hobbit Yr3a Yr4a {1459, 1157}; Maris Bilbo Yr3a Yr4a 1459, 1157}; Moulin Yr6 83; Rapier Yr2 Yr3b Yr4b 83; Wizard Yr2 (heterogeneous) Yr3b Yr4b {1459, 83}.

YR15

Yr16
NoteAdult plant resistance.
Chromosome2D
VarietiesBersee 1604; Cappelle-Desprez 1598.

YR17

Yr17
Note2AS-6M[v] .
Chromosome2AS
6M[v] = 2MS-6MS.6ML or 2MS-6ML.6MS 0009. YrHy1 11308, YrMm58 11308.
YR18
NoteTraesCS7D03G0183600 Yr18 1362}.
Chromosome7DS
Chromosome7D
iAVS+Yr18 970; Thatcher ( Yr7 ) near-isogenic lines with Lr34 including the 13 2-gene combinations reported in {434, 937}.
VarietiesJupateco 73R; Lerma Rojo 64 1375; Libellula 11139; Nacazari 76 1375; Strampelli 11139; Tesia F 79 1375; Tonichi S 81 1375; Wheaton 1375}.
Varieties (alt.)Parula Yr29 10281; Penjamo 62 Yr6 (heterogeneous) 1375; Saar Yr29 10481; Wheats with Lr34 (See Lr34 ); Others 1376; Kauz and derivatives, Bakhtawar 94, WH542, Memof, Bascribey 95, Seyhan 95 Yr9 Yr27 10160.
Marker associationsComplete linkage with Lr34 937,1362; Ltn 1361; and Bdv1 1363; Xgwm120-7D – 0.9 cM – Yr18 – 0.7 cM – Xgwm295-7D 10259.
cSee Lr34 ; Putative ABC transporter 10648. This gene is identical to Lr34, Pm38 and Ltn and confers stem rust resistance in some genetic backgrounds. Some AVS NILs also have Yr18 . Forty-three Chinese land varieties predicted to have Yr18 based on markers had high rust severities. Genetic analyses of four of these landrace (Sichuanyonggang 2, Baikemai, Youmai and Zhangsihuang) indicated the presence of an
independent suppressor 11101. Libellula had an additional 4 QTL and Strampelli had an additional 3 QTL 11139. Yr18 conferred seedling resistance to leaf rust when transformed into durum wheat {M10114}.

YR19

Yr19
SynonymYrCom 183
Chromosome5B
Varieties (alt.)Compair Yr8 183.

YR20

Yr20
SynonymYrFie 181
Chromosome6D
Varieties (alt.)Fielder Yr6 183.

YR21

Yr21
SynonymYrLem 181
Chromosome1B
VarietiesLemhi 183. A closely linked gene, also in Lemhi, conferred resistance to P. s. hordei 10450. Both genes were mapped relative to RGAP markers. Yr21 – YrRpsLem , 0.3 cM 10450.

YR22

Yr22
SynonymYrLe1 183
Chromosome4D
Varieties (alt.)Lee Yr7 Yr23 183.

YR23

Yr23
SynonymYrLe2 183
Chromosome6D
Varieties (alt.)Lee Yr7 Yr22 183.

YR24

Yr24
SynonymYrCH42
Chromosome1BS
iAVS+Yr24 970.
VarietiesChuanmai 42 10339; Meering[*] 3/K733/ Ae. tauschii AUS18911 952; Neimai 836 11259. Synthetic 769 10339.
Type varietiesDecoy 1 10339; K733 952.
Marker associationsGene order Yr15 – Yr24 – Xgwm11-1B 10112; Xbarc187-1B – 2.3 cM – Yr24 – 1.6 cM – Xgwm498-1B 10339. Yr24 is identical to Yr26 {10339, 11391}.

YR25

Yr25
Chromosome1D
VarietiesCarina 0010; Hugenout 0010; Strubes Dickkopf; TP1295 158; TP981 158; Tugela 314; Tugela-DN {0010, 314}.
Varieties (alt.)Carstens V Yr32 10016; Heines Peko Yr2 Yr6 0010; Reichersberg 42 Yr7 0010; Spaldings Prolific YrSP 10016. Yr25 was predicted to be present in Strubes Dickkopf, Heines VII Yr2 , Heines Peko Yr2 Yr6 , Reichersberg 42 Yr7 and Clement Yr9 158. This prediction was confirmed for Heines VII, Heines Peko and Reichersberg 42 but the pathogen culture used in 0010 was not virulent on Clement ( Yr9 ) or on Strubes Dickkopf where another, or a different gene, must be present.
YR26
Identical to YR24 {10339, 11391}.
Yr26
NoteThe earlier location of 6AS (
Chromosome6AL
6VS) 617 is not corect.1BS 0285. 1BL10544.
YR27
TraesKAR2B01G0121530LC . TraesCSB02G182800 .
Yr27
SynonymYrSk 928; QYr.sgi-2B.1 {10184, 11232}.
Chromosome2BS
iAVS+Yr27 970.
VarietiesAvocet 2B (= AvocetS + QYr.sgi-2B.1 ) 11593. Ciano 79 928; Inquilab 91 928; Kauz 928; McMurachy 928; Opata 85 928; PWB343 928; Selkirk 928; Webster 928.
Varieties (alt.)Attila Yr27 928; Kariega Yr18 11593; Kauz and derivatives, Bakhtawar 94, WH542, Memof, Basribey 95, Seyhan 95 Yr9 Yr18 10160.
Marker associationsWhen analysed as a QTL, variation associated with the Yr27 locus was associated with RFLP markers Xcdo152-2B and Xcdo405-2B 928. A Yr27 -specific molecular marker was based on Asn 895 found only in Yr27 11593.
Many CIMMYT wheat lines 953. Recombination Yr31 – Yr27 , 0.148, Yr31 – Lr23 , 0.295 0325.

YR28

Yr28
Note[ YrAS2388 {10822, 11438}]; YrAet672 11664.
Chromosome4DS
VarietiesSynthetic = Altar 84/ Ae. tauschii W-219. Synthetic/Opata 85 SSD population. Genotype lists: 970, 1325.
dvAe. tauschii W-219 1377; CPI 110672 11664.
Marker associationsClose association with Xmwg634-4DS 1377.
cYr28 has a CC-NBS-LRR structure, alternative splicing in the NBS region and duplicated 3’ UTR 11438. GenBank MK73661 – MK73666 11438.
Yr28 was present in all tested accessions of Ae. tauschii ssp. strangulata and some accessions of ssp. tauschii 11438. Often suppressed in synthetic and derived wheat backgrounds. Yr22 was also reported for chromosome 4D, but in the absence of an appropriate single gene stock and the unavailability of avirulent cultures in most laboratories, tests of linkage with Yr28 are unlikely in the foreseeable future. Partial suppression of resistance in synthetic wheat derivatives carrying Yr28 was associated with reduced transcript accumulation 11664.

YR29

Yr29
NoteAdult plant resistance 0119.
Chromosome1BL
Sources / synonymsLalbahadur(Parula 1B) 10281.
VarietiesDruchamp 11235; Kundan 11248.
Varieties (alt.)Attila Yr27 10281; Parula Yr18 10281; Pavon F76 Yr6 Yr7 Yr30 119; Quaiu3 Yr30 10943; Saar Yr18 10481; Yr29 is completely linked with Lr46 . See
Lr46 119.

YR30

Yr30
NoteAdult plant resistance 0120.
Chromosome3BS
VarietiesOpata 85 0120; Parula 0120.
Varieties (alt.)Inia 66 YrA 0120; Pavon F76 Yr6 Yr7 Yr29 0120; Quaiu3 Yr29 10943; Yr30 is closely linked with Sr2 and Lr27 0120.
According to 11773 Yr30 is present in Yaco S, Zhou8425b, Napo 63 and Orofen.

YR31

Yr31
Chromosome2BS
VarietiesPastor 0325.
Marker associationsRecombination values: Yr31 – Yr27 , 0.148; Yr31 – Lr23 , 0.295; Yr27 – Lr23 , 0.1310325; Yr31 maps between Lr12 and Lr23 10928.

YR32

Yr32
SynonymYrCV 1430, YrCv 939
Chromosome2AL
iAvocet S[*] 4/Carstens V 970; Cook[*] 6/Carstens V 970; CRW380 = Carstens V/3*Avocet S 10016; Tres/6*/Avocet S 10016.
VarietiesAnouska 1430; Caribo 1430; Consort {10021, 10023}; Cyrano 1430; Danis 10023; Deben 10283; Hereward {10021, 10022}; Okapi 1430; Oxbow 10021; Senat 10016; Solist 10016; Stakado 10016; Toisondor 11144; Tres 10016; Vivant 10023; Wasmo 10016.
Varieties (alt.)Carstens V Yr25 10016; Felix Yr3 1430; Kraka Yr1 {10021, 10038}; Savannah Yr1 Yr2 Yr3 Yr4 Yr17 10016; Senat Yr3 10016; Zdar Yr3a Yr4a 67.
Marker associationsXwmc198-2A – 2 cM – Yr32 10016; Yr32 was coincident with one AFLP marker 10016.

YR33

Yr33
NoteMore readily detected in seedling tests at elevated temperatures 10336.
Chromosome7DL
VarietiesBatavia 10039; EGA Gregory; Strezecki.
Marker associationsLinkage with Xgwm111-7D and Xgwm437-7D 10039.

YR34

Yr34
SynonymSyn. Yr48 11266
Chromosome5AL
VarietiesAUSC 10040; UC1110/PI610750 RIL#143 11266; AUS27492 11720; WAWHT2046 = AUS91389 10040.
Marker associationsXgwm410.2-5A – 8.2 cM – B1 – 12.2 cM – Yr34 10040; Xgwm291-5A – 0.5 cM – B1 – 1.5 cM – Yr34/Xgwm410.2-5A/Xcfa21495A/KASP109/KASP6988/ etc. 11266; Xgwm291-5A – 2.3 cM – B1 – 0.7 cM – Yr34/Xgwm410.25A/Xcfa2149-5A/KASP109/KASP6988/ etc. 11266. Yr34 is in a 5AS.5AL-5A[m] L translocation
segment that is present in genotypes Arina LrFor and SY Mattis in the Wheat10+ Genome panel 11602. Associated with 5 markers 11720. This gene confers a weak seedling resistance (IT 2C to 3C) and a strong adult plant resistance (0 to 10R) 10040 to Australian pathotype 134E16A+, but is not effective against Australian pathotype 110E143A+ 10040. Yr34 is <1cM from the awn inhibitor B1 11266.

YR35

Yr35
SynonymYrS8 10204
6BS 10203; 6[S] S.6[S] L-6BL 11778.

Yr36

Yr36
NoteAdult plant resistance.
Chromosome6BS
iYecora Rojo NIL PI 638740 10138.
VarietiesBurnside 11044; Glencross 11044; Glupro 10138; Lilian 11044; Shumai 1701 11258; Somerset 11044; UC1041+Yr36 10649.
itvUC1113 NIL PI 638741 10138.
Type varietiesRSL#65 {623, 10138, 10649}; T. dicoccoides FA-15 10138; T. dicoccum PI 415152 {M10058}.
Marker associationsYr36 is between Xucw74-6B and Xucw77-6B and 3-7 cM proximal to Nor-B2 10138; Yr36 is closely linked to the high grain protein locus of T. turgidum var. dicoccoides FA-15 10138; Nor-B2 ....Xucw68-6B – Xucw69-6B/Xbarc101-6B/Yr36 – Xucw66-6B 10272; Yr36 is 2 - 4 cM proximal to Gpc-B1 10272.
cACF33182; Yr36 encodes wheat kinase-START-1 protein 10649; WKS1 is absent in almost all modern tetraploid and common wheats 10649; Sr36 was shown to reduce the ability of the thylakoidassociated ascorbate peroxidase to detoxify reactive oxygen species 11128. Although originally described as conferring high temperature adult plant resistance. This gene confers partial resistance in both juvenile and adult plants at temperatures less than 18C 11277.

YR37

Yr37
NoteDerived from Ae. kotschyi .
Chromosome2DL
VarietiesLine S14 10139.
adLine 8078 10139.
alAe. kotschyi 617 10139.

YR38

Yr38
SynonymYrS12 10204
6A (6AL-6L[sh] .6S[sh] ) 10224.

YR39

Yr39
NoteHTAP resistance
Chromosome7BL
VarietiesAlpowa 10416.
Marker associationsClosely linked to several RGAP markers 10416.

YR40

Yr40
NoteDerived from Ae. geniculata . 5DS(
Chromosome5DL
5DS-T5MS[G ] 10328.

YR41

Yr41
SynonymYrCN19 10228
Chromosome2BS
VarietiesAIM 10228; AIM6 10228; Chuannong 19 {10228, 10502}.
Marker associationsComplete linkage to a 391 bp allele of Xgwm410-2BS 10228; Xgwm410-2B – 0.3 cM – Yr41 10502.

YR42

Yr42
NoteDerived from Ae. neglecta . 6A = 6AL-6[Aen] L.6[Aen] S 10537.
VarietiesLine 03M119-71A 10537.
alAe. neglecta 155 10537. Associated with Lr62 10537.

YR43

Yr43
Chromosome2BL
VarietiesIDO377s = PI 591045 10673; Lolo 10673; many IDO377s derivatives 10673.
Marker associationsXwms501-2B – 11.6 cM – Xwgp110-2B – 4.4 cM – Yr43 – 5.5 cM – Xwgp103-2B – 12.8 cM – Xbarc139-2B 10673.

YR44

Yr44
SynonymYrZak 10674
Chromosome2BL
VarietiesZak = PI 607839 10674.
Marker associationsXSTS7/8/Yr5 – 12.7 cM – Yr44 – 3.9 cM – Xwgp100 – 1.1 cM – Xgwm501-2B 10674.

YR45

Yr45
Chromosome3DL
VarietiesPI 181434 10677; PI 660056 11024.
Marker associationsXbarc6-3D – 0.9 cM – Xwmc656-3D – 6.9 cM – Xwpl18-3D – 4.8 cM – Yr45 – 5.8 cM – Xwp115-3D 10677. This gene is highly effective and confers resistance to all North American Pst pathotypes.

YR46

Yr46
NoteAdult plant resistance.
Chromosome4DL
Chromosome binDistal to 0.56.
iRL6077 = Thatcher*6/PI 250413 10678.
VarietiesChapingo 48 11070; PI 250413 10678.
Marker associationsXgwm165-4D/Xgwm192-4D – 0.4 cM – Yr46/Lr67 10678.
cThis multiple disease resistance locus was identified as a hexose transporter most similar to the STP13 family and containing 12 predicted transmembrane helices
11070. Pleiotropic or closely linked with Sr55 and Lr67

YR47

Yr47
Chromosome5BS
Chromosome bin5BS6-0.81-1.00.
VarietiesAUS28183 = V336 10679; AUS28187 10679.
Marker associationsXgwm234-5B – 10.2 cM – Lr52 – 3.3 cM – Yr47 – 9.6 cM – Xcfb309-5B 10679; Xcfb309-5BXsun480/Xmag705/Xfcp552-5B – 0.4 cM – Yr47 – 4.3 cM – icg16c008/Xgwm234-5B 11200; Xsun180 – 0.4 cM – Lr52 – 0.2 cM – Yr47 – 1.4 cM – Xgwm234-5B 11200. This is a seedling resistance gene (IT 1CN), effective against the main Australian groups of Pst . V336 is the original source of Lr52.

YR48

Yr48
SynonymSyn. Yr34 11266
Adult plant resistance. [ Qyr.ucw-5AL 10705]. 5AL 10705.

YR49

Yr49
NoteAdult plant resistance.
Chromosome3DS
Chromosome bin3DS6-0.55-1.00).
VarietiesAvocetS[*] 3 / Chuanmai 18 AUS91433 10746.
Varieties (alt.)Chuanmai 18 Yr18 10746.
Marker associationsXgps7321-3D/Yr49 – 1 cM – Xgwm1613D 10746.

YR50

Yr50
NoteDerived from Th. intermedium .
Chromosome4BL
VarietiesCH23310849.
Marker associationscent... Xbarc1096-4B – 8.0 cM – Yr50 – 7.2 cM – Xbarc-4B 10849. The genetic distance between Yr50 and Yr62 was estimated to be 27.1±8.6 cM 11023.

YR51

Yr51
SynonymYrAW1 10850
Chromosome4AL
Chromosome bin4AL4-0.80-1.00.
VarietiesLine 5515 AUS 91456 10850.
Varieties (alt.)AUS 278589 Yr57 10850.
Marker associationsXowm45F3R304A – 1.2 cM – Yr51 – 2.5 cM – Xsun104-4A – 1.8 cM – Xgwm160-4A 10850.

YR52

Yr52
NoteAdult plant resistance.
Chromosome7BL
Chromosome bin7BL3-0.86-1.00.
VarietiesPI 183527 10852; PI 660057 = Avocet S/PI 183527 F4-41 10853.
Marker associationsXbarc182-7B – 1.2 cM – Yr52 – 1.1 cM – Xwgp5258 – 5.7 cM – Xcfa2040-7B 10852.

YR53

Yr53
Chromosome2BL
Chromosome bin2BL3-0-0.35.
Type varietiesPI 480148 10854.
VarietiesAvocet S/PI 480148 F5128 10854.
Marker associationsXwmc441-2B – 5.6 cM – Yr53 – 2.7 cM – XLRRrev/NLRRrev 350 6.5 cM – Xwmc149-2B 10853; Yr53 was estimated to be 35 cM distal to Yr5 based on an F2 allelism test, but on an integrated map this distance was about 20 cM.

YR54

Yr54
NoteAdult plant resistance.
Chromosome2DL
VarietiesYr54 RIL GID6032209 10944; Yr54 RIL GID6032334 10944.
Varieties (alt.)Quaiu3 Yr29 Yr30 {10943, 10944}.
Marker associationsYr54 – 0.4 cM – Xgwm301-2D 10944.
Yr54 could be the same as Qyr.tam-2D in Alcedo 10945.

YR55

Yr55
Chromosome2DL
VarietiesFrelon Yr17 AUS 38882 10953.
Marker associationsXmag4089-2D – 11.4 cM – Yr55 – 8.4 cM – Xmag3385-2D 10953.

YR56

Yr56
SynonymQyr.sun-2A 10955
Chromosome2AS
Chromosome binTentatively 2AS5-0.78-1.00 10955.
Type varietiesAUS 91575 10955; Wollaroi (AUS 99174) 10955.
Marker associationsXbarc212-2A – 3.7 cM – Xbarc124-2A – 2.1 cM – Xsun167-2A – 5.7 cM – Yr56 – 7.6 cM – Xsun168-2A – 5.0 cM – Xsun169-2A – 8.0 cM – Xgwm512-2A 10955. Wollaroi has additional APR QTL 10955.

YR57

Yr57
SynonymYrAW2 10963
Chromosome3BS
Chromosome bin3BS8-0.78-1.00.
VarietiesAUS 91463 10963.
Varieties (alt.)AUS 27858 Yr51 10963.
Marker associationssts3B15 – 4.5 cM – BS00062676 – 2.3 cM – Yr57 – 2.0 cM – Xgwm3893B – 2.0 cM – Xbarc75-3B 10963; Bs0006276 – 0.3 cM – Yr57 – 1.3 cm – Xgwm389-3B – 6.1 cM – csSr2 – 2.6 cM – Xgwm533-3B 11480.

YR58

Yr58
NoteAdult plant resistance. [ QYr.sun-3BS 10964]
Chromosome3BS
Chromosome bin3BS7-0.87-1.00.
VarietiesSonora W195 AUS 19292 Yr46 {10964.
Marker associations1121669/3023704 – 3.9 cM – Yr58 – 4.6 cM – 100016328/123392 10964.

YR59

Yr59
NoteAdult plant resistance.
Chromosome7BL
Chromosome bin7BL-0.86-1.00.
VarietiesAvocet S/PI 178759 F4158 10967; PI 660061; PI 178759 10966.
Marker associationsXwmc557-7B – 2.2 cM – Xwgp5175 – 2.1 cM – Yr59 – 1.1 cM – Xbarc32 – 0.5 cM – Xbarc182-7B 10966. Yr59 can be detected in high temperature
seedling tests {10966, 10967}. Yr59 is a highly effective HTAP resistance gene. Crosses with lines possessing Yr39, Yr52 or YrZH84 previously reported on chromosome 7BL segregated, indicating that they are at different loci. However, the allelism test data were based on F2 phenotypes only. The linkage order of these genes is (proximal) Yr39 – 31.2 cM – Yr52 – 5.4 cM – YrPI178759 – 6.0 cM – YrZH84 (distal).

YR60

Yr60
Chromosome4AL
VarietiesAlmop, Avocet*3//Lalbmono 1B*4/Pavon GID 5934039 10968.
Varieties (alt.)LB(Pavon1B) Yr29 10968.
Marker associationsXwmc313/Xwmc219-4A – 0.51 cM – Yr60/Xwmc776-4A 10968.
Yr60 was estimated to be about 10 cM distal to Yr51

YR61

Yr61
SynonymYrpd34 10970
Chromosome7AS
VarietiesPindong 34 10970.
Marker associationsXwgp5765b – 3.9 cM – Yr61 – 1.9 cM – Xwp5467 – 12.5 cM – Xcfa2174 10970.

YR62

Yr62
NoteAdult plant resistance.
Chromosome4BL
Chromosome bin4BL5-0.86-1.00.
VarietiesPI 192252 11023; PI 660060 = Avocet S/PI 192252 F4-103 11024.
Marker associationsIWA3611-4B – 0.8 cM – IWA4041-4B – 0.8 cM – IWA2171-4B – 0.7 cM – IWA99-4B – 1.0 cM – IWA1923-4B – 1.2 cM – Xgwm251-4B – 3.3 cM – Yr62 – 2.0 cM – Xgwm192- – 0.6 cM – Xgwm495-4B – 0.7 cM – Xgwm513-4B 11023. The genetic distance between Yr62 and Yr50 was estimated to be 27.1±8.6 cM 11023.

YR63

Yr63
Chromosome7BS
Chromosome bin7BS1-0.27-1.00.
VarietiesAUS 27955 11027.
Marker associationsIWB33120 – 0.9 cM – Yr63 – 1.5 cM – IWB52844 – 10.5 cM – Xwmc606-7B 11027. sunKASP401 (0.6 Mb, CS RefSeq 2.1) – 2.1 cM – sunCSYr63 – 2.1 cM – sunKASP406_ (7.4 Mb) 11733.

YR64

Yr64
Chromosome1BS
Chromosome bin1BS9-0.84-1.00.
VarietiesPI 660064 = Avocet S/PI 331260 10967.
Type varietiesPI 331260 11030.
Marker associationsXbarc8-1B – 0.6 cM – Xbarc119-1B – 6.5 cM – Xgwm413-1B – 3.5 cM – Yr64 – 2.0 cM – Xgdm33-1B – 5.0 cM – Xgwm498-1B – 3.9 cM – Xcfd59- – 0.4 cM – Xgwm273-1B – 3.9 cM – Xgwm18-1B – 2.6 cM – Xbarc137-1B – centromere 11030; Yr64 is distal to Yr15 ; recombinant lines are reported in 11349. A line combing combining Yr15 and Yr64 is reported in 11618: gene order Xbarc8239YR15Xgwm413102YR64 – Xgwm273196 .

YR65

Yr65
Chromosome1BS
Chromosome bin1BS10-0.5-centromere.
VarietiesAvS/PI 480016 F7-12 11030.
Type varietiesPI 480016 11030.
Marker associationsXbarc119-1B – 6.5 cM – Xgwm413-1B – 5.5 cM – Xgdm33-1B – 4.6 cM
Xgwm498-1B – 3.5 cM – Xbarc187-1B – 2.8 cM – Xgwm273-1B – 3.7 cM – Xgwm18-1B – 1.2 cM – Yr65 – 2.1 cM – Xgwm11-1B – 2.1 cM – Xbarc137-1B – centromere 11030.

YR66

Yr66
SynonymYrVL1 11032
Chromosome3DS
Chromosome bin3DS6-0.55-1.00.
VarietiesAGG91584WHWA = MSP4543.1 11032.
Varieties (alt.)VL Gehun 892 = AGG91586WHEA Yr67 11032.
Marker associationsKASP18087 (3.550 Mb) 2.1 cM – Yr66 – 0.6 vM – KASP48179 11032.

YR67

Yr67
SynonymYrC591 11033, YrVL2 11032
Chromosome7BL
Chromosome bin7BL10-0.78-1.00.
VarietiesAGG91585WHEA = MSP4543.4 11032; C306 11032; C591 {11032, 11033}.
Varieties (alt.)VL Gehun 892 = AGG91586WHEA Yr66 11032.
Marker associationsXbarc32-7B – 2.2 cM – Xcfa2040-7B – 8.0 cM – Yr67 – 11.7 cM – SC-P35M48 11033; KASP37096 (7.170 Mb) – 1.2 cM – Yr67 – 3.6 CM – KASP2239 7.211 MB) 11032.
YR68 CURATOR’S NOTE: publication could not be located.
Yr68
NoteAdult plant resistance.
Chromosome4BL
Chromosome bin4BL1-0.86-1.00.
iAGG91587WHEA1 = csAvYr4BL = Avocet S*5/Undesignated International Nursery ex New Zealand Entry 03.25 11051.
VarietiesUndesignated International Nursery ex New Zealand 03.25 11051.
Marker associationsIWB74301 – 0.5 cM – Yr68/IWA4640 – 0.5 cM – IWB28394 11051.

Yr69

Yr69
NoteDerived from Thinopyrum ponticum partial amphiploid Xiaoyan 7430.
SynonymYrCH86 11052
Chromosome2AS
Chromosome bin2AS5-0.78-1.00.
VarietiesCH7086 11052.
Marker associationsXwmc25-2A – 2.7 cM – X2AS33 – 1.9 cM – Yr69 – 3.2 cM – Xmag3807-2A 11052.
Linked with Yr17 : (F2 seedling test) 30.0 cM 11052. No positive evidence for a Th. Ponticum origin was prested.

YR70

Yr70
NoteDerived from Ae. geniculata
SynonymYrUmb 11055
Chromosome5DS
VarietiesIL393-4, T. durum cv. WH890 / Ae. umbellulata Pau 3732 // CS Ph[I] /3/2*WL71111055.
alAe. umbellulata Pau 3732 11055.
Marker associationsYr70 – 7.6 cM – Xgwm190-5D 11055; A co-segregating 450 bp Lr57-Yr40 -CAPS16 marker was present in IL393-4, but not in many Australian wheat cultivars 11055.
Yr70 behaves as an allele of Yr40 derived from Ae. geniculata . The low infection types are also different. The introgression carrying the Ae. umbellulata segment replacing terminal chromosome arm 5DS was 9.47 Mb with the break point between TraesCS5D02G1600 and TraesCS5G02G20010 11552. Independent mutations indicated that Yr70 differed from Lr76 11552.

YR71

Yr71
NoteAdult plant resistance.
SynonymYrSA3 11056
Chromosome3DL
VarietiesAGG91588WHEA, Sunco/Avocet S RIL4667.153.11.1 11056.
Varieties (alt.)Sunco Yr18 11056.
Marker associationsYr71 – 1.6 cM – IWB17207/IWB10438/IWB23615/IWB63653 – 0.5 cM – IWB57983 – 0.9 cM – IWB23518 – 2.4 cM – Xgwm114b-3D – 5.6 cM – Sr24/Lr24 11056.

YR72

Yr72
SynonymYrAW4 11059
Chromosome2BL
Chromosome bin2BL5-0.59-0.89.
VarietiesAUS27506 11059; AUS27894 11059.
Marker associationsXsun481-2BL ( wPt-665550 ) 1.8 cM – Yr72 – 1.2 cM – IWB12294 – 1.5 cM – Xsun482-2BL ( wPt-7161 ) 1.5 cM – IWB69000 11059.

YR73

Yr73
NoteComplementary gene involved in the Yr specificity.
Chromosome3DL
Varieties (alt.)Avocet R Yr74 11063; Anza = WW15 Yr74 11062; Banks R Yr74 11063; Condor R Yr74 11063; Egret R Yr74 11063; Funo Yr74 11062; Jupateco 73 Yr74 11062; Lerma Rojo-64 Yr74 11062.
Marker associationsLocated and mapped by DarT-Seq markers 11062.

YR74

Yr74
NoteComplementary gene involved in the YrA specificity.
Chromosome5BL
Varieties (alt.)Avocet R Yr73 11063; Anza = WW15 Yr73 11062; Banks R Yr73 11063; Condor R Yr73 11063; Egret R Yr73 11063; Funo Yr73 11062; Jupateco 73 Yr73 11062; Lerma Rojo-64 Yr73 11062.
Marker associationsLocated and mapped by DarT-Seq markers 11062.
The cross Avocet R/Teal used to map Yr73 and Yr74 included a 5BL-7BL reciprocal translocation. Susceptible lines carrying the individual genes will be permanently accessioned after screening candidate lines for the Avocet R = Chinese Spring chromosome configuration. The translocated chromosomes are present in Teal and do not involve Yr74 .

Yr75

Yr75
NoteAdult plant resistance.
SynonymYrAxe 11065
Chromosome7AL
Chromosome bin7AL16-0.86-0.90.
VarietiesAxe/Nyabing-3 RIL#5 11065.
Varieties (alt.)Axe Yr29 11065.
Marker associationsXcfa2016-7A – 1.0 cM – Yr75 – 0.3 cM – IWB36240 11065. sunKASP429 / 428 – 0.1 cM – sunKASP-427 – 0.4 cM – Yr75 – 0.3 cM – sunKASP430_ 11670.

YR76

Yr76
SynonymYrTye 186
Chromosome3AS
Chromosome6D
Chromosome bin3AS4-0.45-1.00 11067.
iAvS*4/Tyee11067.
VarietiesTyee Citr 17773 11067.
Varieties (alt.)ARS-Amber 11067; Cara 11067; Chukar 11067); Hyak Yr17 (based on flanking markers) 11067.
Marker associationsXbarc321-6D – 6.2 cM – Xbarc57-6D – 4.3 cM – Xwmc11-6D – 2.6 cM – Yr76 – 3.4 cM – Xwmc532-6D – 6.9 cM – Xgwm369-6D – 2.6 cM – Xbarc12-6D 11067.
Yr77
NoteAdult plant resistance.
SynonymQyr.ucw-6D 11174
Chromosome6DS
VarietiesPI 322118 11174; PI 164377 11174; PI 388095 11174; PI 520350 11174; PI 623378 11174.
Marker associationsYr77 was strongly associated with IWA167 in the region Xbarc54-6D (6DS) – 15.2 cM – IWA167 (6DS) – 3.9 cM – Xcfd188-6D (6DL )11174.
Among the listed accessions two were from India, one from Pakistan, one from Iran, and one from the USA.

YR78

Yr78
NoteAdult plant resistance.
SynonymQyr.ucw-6B 11174
Chromosome6BS
VarietiesCadenza 11591; Lancer 11591; PI 519805 11174; Spelt PI 190962 11591; Nine others 11174.
Marker associationsThe Yr78 peak fell within a 4.3 cM interval, IWA7257Xwmc737-6B 11174. Yr78 was mapped to a 0.05 cM interval including the un-assembled NOR-B2 locus on chromosome 6BS (RefSeq v1.1 0 region between 101,735,482 and 112,897,900 bp) 11591.
According to 11174 Yr78 is identical to QYr.wgp-6BS.1 in Stephens 10602 and QYr.sun-6B in Janz 10751.

YR79

Yr79
Chromosome7BS
bin : 7BL-0.40-0.45.

YR80

Yr80
NoteAdult plant resistance. YrAW11 11261.
Chromosome3BL
Chromosome bin3BL2-C-0.22.
VarietiesAUS27284 11261.
Marker associationsXgwm3763B – 15.2 cM – KASP5392/KASP65624 – 3.0 cM – Yr80 – 4.9 cM – KASP53113_ 11261.

YR81

Yr81
NoteAdult plant resistance. YrAW5 11262.
Chromosome6AS
VarietiesAus27430/AvS RIL#16 11262.
Varieties (alt.)AUS27430 Yr29 11262.
Marker associationsKASP3077 – 2.7 cM – Yr81 – 6.4 cM – Xgwm459-6A – 1.0 cM – KASP11315 11262.

YR82

Yr82
Chromosome3BL
Chromosome bin3BL7-0.63-1.00.
Varieties (alt.)AUS27969 = JI 1190592 Yr29 11322.
Marker associationsKASP13376/sunKASP301 – 0.4 cM – sunKASP300 – 2.0 cM – Yr82 – 2.0 cM – KASP8775 11322.

YR83

Yr83
Note6A (T6AL·
Chromosome6RL
trT6AL·6RL C19.3 11396.
adWheat + 6R 11396; Wheat + 6RL 11396.
suCS + 6R(6D) 11396.
alTriticale accession T-701 11396.
Marker associationsDeletion mapping indicated that Yr83 was located in 6RL bin FL 0.73-1.00 containing PCR markers
KU.86, TNAC1823, TNAC1826, and TNAC1844 11396. The only previously designated Yr gene derived from Secale cereale is Yr9 from chromosome 1RS.

YR84

Yr84
NoteYrPI487260 11585.
Chromosome1BS
AvocetS + Yr84 11777.

YR85

Yr85
NoteYrTr1 181.
Chromosome1BS
bin : 1BS18 (0.5).

YR86

Yr86
NoteAdult plant resistance. YrZM895 11641; _QYr.caas-
Chromosome2AL
2_ 11641. 2AL 11641.

YR87

Yr87
Note6B (6B-6S[sh] ) {11683, 11684, 11712}.
VarietiesLine 6B-RY-32-3-14 11683 = Line 42 11684 = D42 11712 = Genebank accession number to be advised .
alAe. longissima AEG-67822 11712; Ae. sharonensis AEG-548-4 11712.
cThe same NLR gene with a distinctive coiled-coil (CC) domain was cloned from each alien diploid accession 11712. Development of lines with shortened 6S[sh] segments is described in 11684.
All 16 EMS-induced mutants in Line D42 were susceptible to both stripe rust and leaf rust 11712. Sources of additional genes for seedling (designated “12”) and adult resistances (“13”, “14”, “15”) are listed in 1430. Genotype lists: Chinese common wheats 10369. European wheats 10579. U.K. wheats 10697.
Yr041133
Chromosome7BL
VarietiesLine 041133 11675.
Marker associationsXicst23 (608.9 Mb, CS RefSeq 1.0) – 0.6 cM – Yr041133Xicst338 (609.7 Mb) 11675.
YrA
NoteRefers to a phenotype specificity that appears to be controlled by complementary genes 1563.
VarietiesAvocet[*] {[*] = heterogeneous}; Anza = Karamu = Mexicani =T4 = WW15; Banks[*] ; Condor[*] ; Cocamba; Egret[*] ; Inia 66; Lerma Rojo 64; Lerma Rojo 64A; Nainari 60; Nuri 70; Sanda 73; Sonalika; Zaminder 80.
Varieties (alt.)Condor selection P44 Yr6[*] ; Pari 73 Yr6 ; Saric 70 Yr6 ; Yecora 70 Yr6 1563. The complementary genes are now named Yr73 and Yr74 .
YrAc
Chromosome5DS
VarietiesAe. caudata derivative PAU16060 11613.
alAe. caudata PAU3556 11613.
YrAlp
Chromosome1BS
Varieties (alt.)Alpowa Yr39 10416.
Marker associationsYrAlp – 15.2 cM – Xgwm18-1B – 1.1 cM – Xgwm11-1B 10416; and more closely linked to RGAP markers 10416.
YrAS1676
Chromosome1AL
VarietiesUndesignated selection.
Varieties (alt.)AS1676 Yr18 11672.
Marker associationsLocated to a 1.7 cM region – 485.3 – 490.2 Mb where it co-segregated with 6 KASP markers 11672. May be the same as YrXH-1AL in Xiaohemai based on common markers 11672.
YrAS2388
SynonymYr28 11438; NLR4D-1 11438
v : KS91WGRC11 11599.
YrAvS
VarietiesAvocet R 11007; Avocet S 11007. This designation was used to describe an assumed resistance gene in both Avocet R and Avocet S, the latter being the genetic background of the Avocet S near-isogenic lines. AvS NILs with Yr6 , Yr7 and Yr9 , as well as Avocet R, were susceptible to the variant of Pst race 6 E0 11007.
YrC142
Chromosome1BS
VarietiesSynthetic CI142 = Gaza/Boy// Ae. tauschii 271 10667.
Marker associationsLocated in the Yr24/Yr26 region close to Xbarc187-1B and Xgwm273-1B 10667. Although postulated to be unique this gene is likely Yr24/Yr26 .
YrC591
NoteYr67 .
Chromosome7BL
Chromosome bin7BL3-0.85.1.00.
VarietiesC591 10606; Zhongzhi 1 10606.
Marker associationsXcfa20-40-7B – 8.0 cM – YrC591 – 11.7 cM – SCP35M48 10606; Xmag1714-7B – 1.2 cM – – 0.4 cM – Xbarc182-7B 11099. This gene is Yr67 11032.
YrCf75
NoteRecessive.
Chromosome2AL
VarietiesChangfeng 75 11646.
Marker associationsLocated in interval 577638 Mb (CS RefSeq v1.0, flanked by AX-1110060462 and AX-111004763 11646.
YrCle
Chromosome4B
Varieties (alt.)Clement Yr9 186.
YrCK
NoteTemperature sensitive 10219.
Chromosome2DS
VarietiesCook Yr34 {10221, 10219, 10220}; Sunco Yr34 10220.
YrCN17
NoteDerived from S. cereale . 1B, 1BL,
Chromosome1RS
VarietiesChuannong 17 10686; CN12 10562; CN17 10562; CN18 10562.
dvS. cereale R14 10686.
alS. cereale L155 10562.
YrD
Chromosome6A
VarietiesDruchamp 185.
YrDa1
Chromosome1A
Varieties (alt.)Daws YrDa2 186.
YrDa2
Chromosome5D
Varieties (alt.)Daws YrDa1 186.
YrDru
Chromosome6B
Chromosome5B
VarietiesDruchamp {184, 185}.
YrDru2
Chromosome6A
VarietiesDruchamp 184.
YrExp1
Chromosome1BL
Varieties (alt.)Express YrExp2 10601.
Marker associationsXwgp78-1B – 4.2 cM – YrExp1 – 3.4 cM – Xwmc631-1B 10601.
YrExp2
Chromosome5BL
Varieties (alt.)Express YrExp1 10601.
Marker associationsXgwm639-5B – 9.2 cM – Xwgp81-5B – 1 cM – YrExp2 – 0.7 cM – Xwgp82-5B 10601. Based on the presence of the nearest flanking markers YrExp2 was postulated in Expresso, Blanca Grande, Buck Pronto and Jeff/Pronto 10601.
YrF
Chromosome2B
Chromosome2BS
Varieties (alt.)Francolin#1 Yr29 {11156, 11218, 11219}.
Marker associationsXgwm374-2B – 2.0 cM – YrF – 1.8 cM – Xwmc474-2B 11219. Francolin#1 is also released under the names Ufam and BARI Gom 27 11156.
YrF
Chromosome5AS
Chromosome bin5AS-0.4-0.98 11781.
VarietiesFlanders 11781.
Marker associationsXbarc56-5A 2.0 cM – YrF – 0.6 cM – AX108925494 11781.
YrHA
Chromosome1AL
VarietiesH901414-121-5-5-9 11100.
Marker associationsXwmc469-1A – 3.4 cM – YrHA – 4.6 cM – Xgwm497-1A 11100.
YrH46
Chromosome6A
Varieties (alt.)Hybrid 46 Yr4b 184. Not the same gene as YrDru2 184.
YrHu
NoteDerived from Psathyrostachys huashanica .
Chromosome3AS
Chromosome binH9020-17-25-6-4 11229.
Marker associationsXcfd79-3A – 7.2 cM – YrHu – 0.7 cM – BG604577 11229.
YrH62
Chromosome1B
VarietiesLine 03031-1-5 (ex CIMMYT) 11303.
Marker associationsXgwm273-1B – 3.7 cM – Ax-109871410/Ax-109472792/Ax109352427 – 0.3 cM – YrH62 – 0.8 cM – Ax-109862469 – 2.1 cM Xbarc137-1B 11303.
YrH9020
NoteDerived from Psathyrostachys huashanica .
Chromosome2DS
VarietiesH9020-1-6-8-3 10979.
alPsathyrostachys huashanica 0503383 10979.
Marker associationsXgwm102-2D – 3.8 cM – Xgwm4552D – 5.8 cM – YrH9020 – 4.4 cM – Xgwm261-2D – 2.3 cM – Xwmc503-2D – 0.6 cM – Xcfd53-2D 10979.
YrHVII
Chromosome4A
Varieties (alt.)Heines VII Yr2 Yr25 186.
YrJ22
Chromosome2AL
VarietiesJimai 22 11195.
Marker associationsXgwm382-2AL – 1.0 cM – YrJ22 – 7.3 cM – IWA1348 11195; The mapped region was reduced to 0.3 Mb corresponding to 340.5 kb; H736J22/HJ732 – H400 (768.7 – 769.0 Mb) 11679.
YrJ44
NoteQYr.nwafu-6AL 11696.
Chromosome6AL
Varieties (alt.)Jimai 44 Yr29 11696.
Marker associationsMapped to a 3.5 cM interval flanked by AQP markers AX-109373479 and AX-109563479 11696.
YrKK
NoteAdult plant resistance.
Chromosome2BS
Chromosome bin2BS-1.
VarietiesKenya Kuku 11034.
Marker associationsXgwm148-2BS – 3.2 cM – YrKK – 1.8 cM – Xwmc474-3B 11034. Resistance conferred by YrKK at the adult stage approached immunity. A slight effect was observed on seedling response 11034.
YrLk
Chromosome7BL
VarietiesLankao 5 11252. Xbrac267-7B – 4.4 cM – YrLk – 3.3 cM – Xwmc396-7B 11252.
YrLM168a
NoteAdult plant resistance.
Chromosome6BL
VarietiesXwmc756-6B – 4.6 cM – YrLM168a – 4.6 cM – Xbarc146-6B 11284.
Marker associationsXwmc756-6B – 4.6 cM – YrLM168a – 4.6 cM – Xbarc146-6B 11284. LM168a and LM168b are derivatives of Milan 11284.
YrMin
Chromosome4A
VarietiesMinister 184.
YrMor
Chromosome4B
Varieties (alt.)Moro Yr10 186.
Marker associationsThe development of an STS marker, derived from an AFLP fragment, that co-segregates with YrMor was reported in 357.
YrMY37
NoteyrMY37
Synonym11282
Recessive. 7BL 11282.
YrMY41
Chromosome1B
VarietiesMianmai 41 11271.
A cross with AvS+Yr26 failed to segregate. Although claimed to be a possible allele of Yr24/Yr26 the gene identified is likely to be the same.
YrND
Chromosome4A
Varieties (alt.)Nord Desprez Yr3a Yr4a 184. May be the same as YrMin 184.
Yrns-B1
Chromosome3BS
VarietiesLgst.79-74 33.
Marker associationsXgwm493 (distal) - 21 cM – Yrns-B1 33; As a QTL, Yrns-B1 was located in a 3 cM interval between Xgwm493-3B and Xgwm1329-3B 10383.
YrP
Chromosome5DS
VarietiesAe. peregrina derivative PAU16058 11614.
alAe. peregrina PAU3519 11614.
YrP81
Chromosome2BS
VarietiesP8110696; Xu29 10696.
Marker associationsXgwm429-2B – 1.8 cM – YrP81 – 4.1 cM – Xwmc770-2B 10696.
YrPak
Chromosome5BS
VarietiesPI 1388231 11543.
Marker associationssunKASP338 – 3.3 cM – YrPak – 3.5 cM – sumKASP341 11543.
PI 1388231 also carried two genes for adult plant resistance, one of which was positive with Lr46 marker Lr46SNP1G22_ 11543.
YrR61
SynonymQYr.uga-2AS 10914
Chromosome2AS
VarietiesPioneer 26R61 = PI 612056 10914.
YrR212
NoteDerived from S. cereale 1B,
Chromosome1BL
Chromosome1RS
VarietiesR185 10562; R205 10562; R212 10562.
alS. cereale R212 10562.
YrS
Chromosome3B
VarietiesStephens 185.
YrS2199
Chromosome2BL
Chromosome bin2BL0.89-1.0010618.
VarietiesS219910618.
Marker associationsXgwm120-3B – 11.0 cM – YrS2199 – 0.7 cM – Xdp269-2B 10618.
YrSte
Chromosome2B
VarietiesStephens 184.
YrSte2
NoteStephens 184
Chromosome3B
YrSD
Chromosome5BL
iTaichung 29*6/Strubes Dickkopf 11085.
VarietiesStrubes Dickkopf 11085.
Marker associationsXwmc640-5B – 3.6 cM – YrSD – 2.4 cM – Xbarc59-5B – 3.0 cM – Xwmc783-5B 11085. The authors concluded that this gene was different from Yr25 , which was located in chromosome 1D 158.
YrSP
Chromosome2BS
Chromosome bin2BL-C-0.5.
iCx1 = Avocet S*4/Spaldings Prolific 10018.
Varieties (alt.)Spaldings Prolific Yr25 10018.
Marker associationsIWA638 – 0.6 cM – YrSP – 1.5 cM – dp269-2 – 1.9 cM – Xwmc332-2B 11091.MOVE TO YR5
YrSp
NoteAllelic with Yr5 and Yr7 10759
SynonymYrSP 10018
Chromosome2B
Probably 2BL.
YrTr1
Chromosome6D
Varieties (alt.)Tres YrTr2 186.
YrTr2
Chromosome3A
Varieties (alt.)Tres YrTr1 186.
YrTye
Chromosome6D
VarietiesTyee 186.
Yru1
NoteTuG1812G0500003718 .
Chromosome5AL
Chromosome bin5AL10-0.57-0.78.
dvT. urartu PI 428309 11494.
Marker associationsXgwm186-5A – 30.5 cM – Yru1 – 10.8 cM – Xgpw7007-5A , then fine mapped with 82 additional polymorphic markers 11494.
cYru1 has as NBS-LRR structure with N-terminal ankyrin and C-terminal WRKY repeats 11494. GenBank MT018453.
The Yru resistance allele was present in a number of T. urartu accessions, but not in G1812 11494.
YrV23
NotePresumed to be Yr3a .
Chromosome2B
VarietiesVilmorin 23 10370; Vilmorin 184. Allelic but not the same as YrSte 184.
Yrwh2
NoteRecessive.
Chromosome3BS
VarietiesWuhan 2 11150.
Marker associationsXwmc540-3B – 5.9 cM – Yrwh2 – 10 cM – Xgwm566-3B 11150.
YrXH [11729]. YrXH-1AL 11729. 1AL 11729.
Yrxy1
NoteHigh temperature resistance.
VarietiesMingxian 169/Xiaoyan 54 F3-4-14 10829.
Varieties (alt.)Xiaoyan 54 Yrxy2 10829.
Marker associationsXbarc49-7AS – 15.8 cM – Yrxy1 with closer flanking RGA markers 10829.
Yrxy2
NoteHigh temperature resistance.
VarietiesMingxian 169/Xiaoyan 54 F3-4-30 10829.
Varieties (alt.)Xiaoyan 54 Yrxy1 10829.
Marker associationsXwmc794-2AS – 4.0 cM – Yrxy2 – 6.4 cM – Xbarc5-2AL 10829.
YrYam
Chromosome4B
Varieties (alt.)Yamhill Yr2 Yr3a Yr4a 185.
YrZH22
Chromosome4BL
VarietiesZhoumai 22 11563.
Marker associationsXWGGB133 – 3.29 cM – YrGH22 – 2.63 cM – XWGGB146 11563. YrZH22 could not be distinguished from Yr50 based on map location.
YrZH84
Chromosome7BL
VarietiesAnnong 7959 10331; Zhoumai 11 10331; Zhoumai 12 10331.
Varieties (alt.)Zhou 8425B Yr9 10331.
Marker associationsXwmc276-7B – 0.6 cM – Xcfa2040- – YrZH84 – 4.8 cM – Xbarc32-7B 10331.

3.22. Reaction to Puccinia triticina⌂ Home

Disease: Brown rust, leaf rust.

LR1

Lr1
Chromosome5D
Chromosome5DL
Chromosome1B
iCentenario/6[*] Thatcher 317; Malakoff/6[*] Prelude 317; Wichita[*] 4/Malakoff 613.
VarietiesLine 87E03-S2B1 10561; Centenario 317; Chicora 'S' 143; Daws (heterogeneous) 1019; Dirkwin 1019; Glenlea {976, 1255}; Halle 9H37 74; Hyslop 1019; Luke {heterogeneous}1019; Malakoff 47; McDermid 1019; Mexico 120 933; Newton 1023, 1024, 143; Norco 1019; Shabati Sonora 842; Sonora 64 842; Tarsa 842; Uruguay 954; Walliday 1019.
Varieties (alt.)Blueboy Lr10 143; Blueboy II Lr10 Lr24 143; Erythrospermum 142 and 953 Lr3 74; Laura Lr10 Lr34 712; Norka Lr20 1552; Plainsman V Lr3 1024; Suneca Lr13 485.
dvSeveral Ae. tauschii accessions 10191.
Marker associationsCo-seg. with Xpsr5675D and Xglk621-5D in a Frisal/ Lr1 resistant line. pTAG621 was converted to a diagnostic STS354; Terminally located10189; In Ae. tauschii recombination in the region was 5-10X that in common wheat, gene order Xpsr567-5D - Lr1 - Xabc718-5D 10191; Mapped to a 0.7 cM interval in Ae. tauschii and a 0.075 cM interval in wheat 10408; A candidate gene for Lr1, Lr1RGA1 , encoding a CC-NBSLRR protein, cosegregated with Lr1 10408; Co-segregation with RGA567-510561.
cLr1 is a member of a multigene family (PSR567), has a CC-NBS-LRR structure, and produces a protein of 1,344 aa, EF567063 10561.
LR2
Chromosome1B
Chromosome2DS
Lr2a
SynonymLr2 47
iPrelude[*] 6/Webster 320; Red Bobs[*] 6/Webster 320; Webster/6[*] Thatcher RL6016 306; Wichita[*] 4/Webster 613.
VarietiesEurekRRa CI 17738 143; Festiguay 843; Webster CI 3780 47; Common in the Canadian Western Spring Wheat (CWSW) cultivars 11700.
Varieties (alt.)Alex Lr10 976; Ck 9835 Lr9 10146; Ck 9663 Lr2 Lr10 10146; Guard Lr10c 976; James Lr10 976; Len Lr10 976; Marshall Lr10 976; Mediterranean W1728 Lr3 1369; Shield Lr3 Lr10 198; Waldron Lr10 143.
Marker associationsFlanked by KASP markers kwm1620 (64.455 Mb, CS REFSeq 2.1.) and kwm1623 (64.760 Mb) 11700.
Lr2b
SynonymLr2[2 ] 1409
iPrelude[*] 6/Carina 320; Red Bobs[*] 6/Carina 320; Thatcher[*] 6/Carina 320; Wichita/4[*] Carina 613.
VarietiesCarina 613.
Lr2c
SynonymLr2[3 ] 1409
iPrelude[*] 5/Brevit 320; Prelude[*] 6/Loros 320; Red Bobs[*] 6/Brevit 320; Red Bobs[*] 6/Loros 320; Thatcher[*] 4/Brevit 320; Thatcher[*] 6/Loros 320; Wichita[*] 4/Brevit 613; Wichita[*] 4/Loros 613.
VarietiesBrevit 613; Loros {1257, 317}.
LR3
Because Lr3 appears to be a complex locus 486 Democrat and Democrat/6[*] Thatcher should be accepted as standards. There is evidence to suggest that the allele in Mentana, and therefore many derivatives, is Lr3b 939. If this is correct, many genotypes listed under Lr3a are likely to be Lr3b . Durum cv. Storlom likely carries Lr3a or Lr3b 10469. Cv. Camayo was considered to have a closely linked gene, or Lr3 allele 10469. Resistance in Storlom co-segregated with an STS derivative of Xmwg798-6B . All three Thatcher NILs with named Lr3 alleles carried the STS marker 10469.
Lr3a
SynonymLr3 47
Chromosome6B
Chromosome6BL
iDemocrat/6[*] Thatcher 318; Wichita[*] 4/ Mediterranean 613.
VarietiesBelocerkovskaja 289 74; Bennett 1024; Democrat 47; Fertodi 293 74; Gage 1024; Hana 68; Homestead 1024; Ilyitchovka 75; Juna 75; Jubilejne 68; Kawvale 143; Lancota 1024; Mara 68; Mediterranean 47; Mediterranean W3732 1369; Mentana 842; Mironovskaya 264 & 808 74; Odra 75; Osetinskaya 74; Ottawa 143; Pawnee 1408; Ponca 143; Rannaja 12 74; Shawnee 143; Shirahada 842; Sinvalocho MA 10929; Skorospelka 3b 74; Sledkovicova K1004 74; Viginta 68; Warrior {1024, 143}; Yubileynaya 75.
Varieties (alt.)Amika Lr26 76; Bezostaya 1 Lr34 74; Bowie Lr14b 319; Erythrospermum 142 & 953 Lr1 74; Istra Lr26 76; Mediterranean W1728 Lr2a 1369; Plainsman V Lr1 1024; Shield Lr2a Lr10 198; Solaris Lr26 76; See also 69.
Type varietiesStorlom 10469.
Marker associationsCo-segregation with Xmwg798-6B {10469, 9921}; cDNA marker TaR16 was completely linked to Lr3 in a population of 109 gametes 10058; UBC840 540 - Lr3a , 6 cM 10263.
Lr3b
SynonymLr3bg 486
iThatcher[*] 6/Bage; RL6094 = Tc[*] 6/T6 307.
VarietiesBage 486.
Varieties (alt.)T6 Lr16 307. Durum cv. Storlom likely carries Lr3a or Lr3b 10469. Cv. Camayo was considered to have a closely linked gene, or Lr3 allele 10469. Resistance in Storlom co-segregated with an STS derivative of Xmwg798-6B . All three Thatcher NILs with named Lr3 alleles carried the STS marker 10469.
Lr3c
SynonymLr3ka 486
iTc[*] 6/Klein Aniversario.
VarietiesBlava 10345; CI 13227 11021; Klein Aniversario 486.
Lr3d
iRL6062, Thatcher*6/PI 268316 11054.
VarietiesPI 268316 11054.
LR4, LR5, LR6, LR7, LR8
VarietiesPurdue Selection 3369-61-1-10 = Waban365; Not available as separate single-gene lines. Therefore, alleles at these predicted loci were never characterized.

LR9

Lr9
NoteDerived from Ae. umbellulata . 6BL = T
Chromosome6BS
6BL-6U#1L 389. 6B1299, 1296, 954.

LR10

Lr10
SynonymLrL 31
1A 312, 546. 1AS 939.
Lrk10
NoteA receptor-like kinase. The locus Xsfr1(Lrk10)-1A , detected by the probe Lrk10, is completely linked with Lr10 in chromosome
Chromosome1AS
The gene encodes a receptor-like kinase with extracellular and kinase domains 0297. Using probe pLrk10-A, developed from the extracellular domain, 6 homologues were found in chromosomes 1A (1), 1B (3) and 1D (2) as well as group 1 chromosomes of T. monococcum , Ae. tauschii and barley {0296, 0294}. Probes based on the kinase domain identified further homologues in chromosomes 3AS and 3BS as well as the corresponding regions in rice and maize 0294. Both orthologous and paralogous evolution were suggested.

LR11

Lr11
SynonymLrBP2 11074
Chromosome2DS
Chromosome2A
iThatcher[*] 6/Hussar 306; Wichita[*] 4/Hussar 613.
VarietiesBulgaria 88 142; Hart 1024; Hazen 49; Hussar 1409; Panola 10830; Pioneer 2850; Pocahontas 10146; Saluda {10699, 10146}.
Varieties (alt.)Buck Poncho Lr10 11074; Ck9803 Lr18 10595; FFR 524 Lr18 10595; Jamestown Lr18 10830; Karl 92 Lr3 Lr10 2101; Oasis Lr9 143; Pioneer 2684 Lr18 10595; SS520 Lr18 10595.
Marker associationsLr11 – 0.3 cM – SCAR32/35 – 1.6 cM – Xgwm614-2D 11074.

LR12

Lr12
NoteAdult plant reaction.
Chromosome4B
Chromosome4BL
Chromosome bin4BL5-0.86-1.00.
iExchange/6[*] Thatcher 306.
VarietiesOpal 306.
Varieties (alt.)AC Domain Lr10 Lr34 228; Caldwell Lr14a 10787; Chinese Spring Lr34 301; Exchange Lr10 Lr16 326; Sturdy Lr13 301; Unknown accessions 208.
Marker associationsXgwm251-4B – 0.9 cM – Lr12 – 1.9 cM – Xgwm149-4B 10951. Possible commonality with Lr31 .
**LR13** TraesCS2B01G182800 {11530, 11531}; also predicted in 11529.
Lr13
NoteAlthough originally described as a gene for adult plant reaction 032, 326, Lr13 can be detected at the seedling stage especially at high temperatures {939, 1156}.
SynonymLrZH22 {11467, 11468}; LrLC10 11468
Chromosome2BS
iTc[*] 7/Frontana = RL4031 306; fifteen Thatcher lines with 2-gene combinations 711.
Chromosome bin2BS1-0.35-0.75.
VarietiesThis gene is very widespread 939; Hereward 288; Hustler 608; Kinsman 608; Kenya Plume 1370; Liaochen 10 {11468, 11530}; Manitou 326; Mardler 608; Maris Huntsman 608; Moulin 288; Napayo 70; Neepawa 143; Norman 608; Pastiche 288; Polk 143; Virtue 608; Zhoumai 22 {11467, 11468, 11531}.
Varieties (alt.)AC Barrie Lr6 10178; Beaver Lr26 1032; BH1146 Lr34 268; Biggar Lr14a 712; Chris Lr34 ; Columbus Lr16 1258; Cumpas 88 Lr26 1373; Era Lr1 0 143; Frontana Lr34 32, 1374, 326; Genesis Lr14a 712; Hartog Lr1 Lr46 127; Hobbit Lr17a 608; Hobbit Sib Lr17a 1350; Inia 66 Lr14a Lr17 1373; Klein Aniversario Lr3ka 32; Kenyon Lr16 300; Lerma Rojo 64 Lr17a Lr34 1373; Oasis 86 Lr19 1373; Parula Lr34 Lr46 1374; Suneca Lr1 485; Yecora Lr1 1374.
Marker associationsXpsr912-2B – 9.1 cM – Lr13 – 7.9 cM – Xbcd1709-2B – 9.8 cM Cent. 88; Lr13 – 10.7 and 10.3 cM – Xgwm630-2BS 10463; Xbarc163-2B – 5.1 cM – Lr13 – 8.7 cM – Xstm773b-2B 329; Xbarc55-2B – 1.1 cM – Xkwh37 – 4.9 cM – Lr13 – 5.8 cM – Xgpw1109 – 3.7 cM – Xbarc18-2B 11068; Xbarc55-2B – 2.4 cM – LrZH22 – 4.8 cM – Xgwm374-2B 11467; Xbarc55-2B – 2.2 cM – XCAUT163 – 1.10 cM – LrLC10 – 0.55 cM – Lseq22 – 6.05 cM – Xbarc18-2B 11468.
cEncodes a CC-NBSLRR protein {11531; 11532} that is identical to that produced by one of the Ne2m haplotypes 11531.
GenBank MW756036 11532. Lr13 is an allele of the YR27/NE2 locus 11593. Pleiotropic with the specific Ne2m allele at the NE2 locus.
LR14
Lr14a
SynonymLrLla 10520
Chromosome7B
Chromosome7BL
Chromosome bin7BL10-0.78-1.00.
iSelkirk/6[*] Thatcher 319; Arina LrFor 11549.
Sources / synonymsCS[*] 6/Hope 7B 964.
VarietiesAotea 964; Brigand 608; Gala 964; Glenwari 964; Hofed 964; Hope 964; H-44 964; Lawrence 964; Redman 964; Regent 964; Renown 964; Spica 964.
Varieties (alt.)Biggar Lr13 712; Brambling Lr23 Lr34 10563; Caldwell Lr12 10787; Genesis Lr13 712; Inia 66 Lr13 Lr17a 939; Selkirk Lr10 Lr16 319.
Type varietiesArcangelo 11015; Bicre 11015; Creso 11015; Colosseo 11015; Italo 11015; Lloreta INIA 10520; Plinio 11015; Somateria 10520.
Varieties (alt.)Forno Lr34 Lr75 11549.
Marker associationsXwmc273-7B – 13 cM – Lr14a – 10 cM – Xgwm344-7B 10520; Xwmc10/Xgwm344/wPt1085-7B – 1.1 cM – wPt4038-HRM – 0.1 cM – Lr14a – 1.0 cM – wPt4140-HRM 11015.
The Lr14 region in tetraploid wheat harbours Qlr.ubo-7B.2 , a gene that confers durable resistance in durums {10734, 10736} and that is present in many Italian, CIMMYT and ICARDA durum cultivars 10736. The relationship of this gene described as Lr14c (reference genotype Creso) in 10735 remains to be determined. Reasons for considering Lr14c as a unique allele are given in 10735 but according to 11518 the gene sequence in Creso is identical to that of Lr14a . In association mapping the presence of QLr.ubo-7B.2 was predicted with 96% accuracy based on appropriate alleles of Xcfa2257.2, Xgwm344.2 and Xwmc10 in the distal region of chromosome 7BL 10736.
Lr14b
iMaria Escobar/6[*] Thatcher 319.
VarietiesWeebill 1 10571.
Varieties (alt.)Bowie Lr3 ; CI 13227 Lr68 10817; Maria Escobar Lr17 319; Rafaela Lr17 314.
Most accessions with Lr14b , including the Tc NILs probably carry APR gene Lr68 10817 which could be the same as QLr.osu-7BL 10817. A marker based on the Lr14a sequence failed to amplify a product in the Tc+14b NIL 11549.
Lr14ab
iLr14a/6[*] Thatcher//Lr14b/6[*] Thatcher Seln 319.

LR15

Lr15
Note2DS 942, 843.
iThatcher[*] 6/Kenya W1483 306.
Chromosome bin2DS1-0.33-0.47.
VarietiesKenya W1483 843.
Marker associationsXgwm4562-2D – 3.1 cM – Lr15 – 9.3 cM – Xgwm102-2D 11234; Xwmc764-2B – 9.4 cM – Lr16 – 1.4 cM – Xwmc661-2B 11219. Probably allelic with Lr2 .
Lr16
NoteThe following chromosome locations are consistant with the finding that the first location was based on the use of a Rescue monosomic series. Rescue differs from CS by a 2B-4B translocation 939. Lr16 is always asociated with Sr23 .
SynonymLrE 31
Chromosome4B
Chromosome2BS
iExchange/6[*] Thatcher 306; RL6096 = Tc[*] 6/T6 307.
VarietiesAC Domain 10170; AC Foremost 10170; Arapahoe 2101; Brule 2101; Ciano 79 1373; Etoile de Choisy 74; Imuris 79 1373; McKenzie 10170; Millenium 2101; Papago 86 1373; Redland 2101; Vista 2101; Waxwing 11267.
Varieties (alt.)AC Barrie Lr13 10178; Columbus (heterogeneous) Lr13 1258; Exchange Lr10 Lr12 31; Kenyon Lr13 300; Francolin#1 Lr46 11219; Selkirk Lr10 Lr14a 31; T6 Lr3bg 307; Warden Lr10 31.
Marker associationsDistally located: Lr16 – Xwmc764-2 , 1, 9 and 3 cM, respectively, in crosses RL4452/AC Domain, BW278/AC Foremost and HY644/McKenzie {10189, 10170}.
A recessive gene LrCH1539 in accession CH1539, flanked by markers scau2BS81 (6.227 Mb, CS RefSeq 1.0) and scau2BS47 (7.006 Mb) was located at the same position as Lr16 {11680|.

LR17

Lr17a
SynonymLr17
Chromosome2A
Chromosome2AS
Chromosome bin2AS-5 10572.
iKlein Lucero/6[*] Prelude 318; Klein Lucero/6[*] Thatcher 318; Maria Escobar/4[*] Thatcher 318.
VarietiesCDS Stanley 11579; EAP 26127314; Jagger 10346, 338, 10146; Jupateco 939; Klein Lucero 318; Mace 11579; Santa Fe 10830; TAM111 10595; SY Mattis 11579; Trego 10572.
Varieties (alt.)Fuller Lr39 10699; Inia 66 Lr13 Lr14a ; Jagger Lr37 11328; Lerma Rojo 64 Lr13 Lr34 1373; Maria Escobar Lr14b 318; Rafaela Lr14b 314.
Marker associationsXbarc123-2A – 4.8 cM – Xgwm636-2A – 4.0 cM – Lr17a 10571; Xgwm614-2A – 0.7 cM – Lr17a – Xwmc407-2A 10572; Lr17a – 3.7 cM – Xbarc212-2a 10795.
Lr17b
SynonymWBR2 615, LrH 970
Chromosome2A
VarietiesBrock 260; Harrier 1350; Maris Fundin 1350; Norin 10-Brevor, 14 1350; Norman 1350.
Varieties (alt.)Contra Lr13 10345; Hobbit Sib = Dwarf A Lr13 1350; Kalasz Lr13 10345; Riband Lr13 10345; Sarka Lr13 10345; Tarso Lr26 229.

LR18

Lr18
NoteDerived from T. timopheevii . Independently derived lines with Lr18 possess a unique N band terminally located in chromosome
Chromosome5BL
Low seedling responses conferred by Lr18 are most effective at 15-18C. With increasing temperatures the response becomes less effective and ineffective at 25-27C 935, see also, 1614. 5BL 935 = T5BS.5BL-5G#1L 389.

LR19

Lr19
NoteDerived from Th. elongatum . 7DL = T
Chromosome7DS
7DL-7Ae#1L 1323, 389, 388, 657, 291, 956

LR20

Lr20
Chromosome7AL
iThatcher+Lr20.
Sources / synonymsCS[*] 5/Axminster 7A 1293.
VarietiesAxminster 1175, 1305, 348; Birdproof 1554; Bonus 1554; Converse 1554; Festival 1554; Kenora 1554; Kenya W744 1554; Maris Halberd 608; Normandie {1554, 348}; Sappo 608; Sicco
310; Thew {140, 1552}; Timmo 608.

LR21

Lr21
SynonymLr40 {10415, 1200}
Chromosome1DL
Chromosome1D
Chromosome1DS
iThatcher[*] 6/Tetra Canthatch/ Ae. tauschii var. meyeri RL 5289 306.
VarietiesBarlow 11093; Faller 11093; Tetra Canthatch/ Ae. tauschii var. meyeri RL 5289, RL 5406 648; Lovitt 10766; McKenzie {228, 10766}; Prosper 11093; WGRC2 = TA1649/3* Wichita 299; WGRC7 = Wichita/TA1649//2*Wichita 299.
Varieties (alt.)AC Cora Lr13 713; WGRC16 = TAM107*3/ Ae. tauschii TA 2460 Lr39 10415, 220.
dvAe. tauschii accessions: RL5289 = TA15991241; Ae. tauschii TA2460 Lr39 10415, 220; TA1649 299; TA1691 299; TA2378 299; TA2470 299; TA2483 299; TA2495 299; TA2527 299; TA2528 299.
Marker associationsAll members of the Lr21 family carry a STS derivative of XksuD14-1D that has a resistance gene analogue structure 299; XksuD14-1D was reported to map 1.8 cM proximal to Lr21 in375; Lr21 – 0 cM – rgaYr10b – 0.6 cM – Xgdm33-1D 360; Xksu-1D is part of Lr21 10420.
cLr21 was cloned and shown to have a NBS-LRR structure 10420. Lr21 -mediated resistance requires expression of RAR1, SGT1 and HSP90 11274.
A reconstituted effective Lr21 allele (designated Lr21-b ) was obtained as a rare (1/5,872) recombinant (accession TA4446) between Lr21 pseudogenes in common wheat cultivars Fielder and Wichita 10620. Further haplotype analyses are reported in 10766. A further spontaneous allele designated Lr21-tbk with ‘several mutations in exons 2 and 3’ leading to three amino acid changes was identified cv. Tobak 11762.

LR22

Lr22a
NoteAdult plant reaction.
Chromosome2DS
iNeepawa*6/RL5404, RL4495 10467; Thatcher[*] 3//Tetra Canthatch/ Ae. squarrosa var. strangulata RL 5271 306; Thatcher*7//TetraCanthatch/RL5271, RL 6044 10467; CH Campala Lr22a 11209.
VarietiesLine 98B34-T4B 10467; Tetra Canthatch/ Ae. squarrosa var. strangulata RL 5271, RL 5404 311.
Varieties (alt.)AC Minto Lr11 Lr13 713.
dvAe. squarrosa var. strangulata RL 5271.
Marker associationsXgwm296-2DS – 2.0 cM – Lr22a 10446; Xgwm455-2D – 1.5 cM – Lr22a – 2.9 cM – Xgwm296-2D 10467; Xgwm455-2D **–
Lr22b
NoteAdult plant reaction.
VarietiesCanthatch 298; Marquis 970; Thatcher 298. This gene will be present in near-isogenic lines based on Thatcher.

LR23

Lr23
SynonymLrG 951
Chromosome2BS
iLee FL 310/6[*] Thatcher 948.
Sources / synonymsCS[*] 7/Kenya Farmer 2B 948; CS[*] 6/Timstein 2B 948.
VarietiesBT-Schomburhk 11601; Cranbrook; Crim 1091; Hope/Timstein 1091; I 310678 1091; I 310685 1091; I 349162 1091; IWP94 10569; K 45973 1091; K 51070 1091; Rocta 1091.
Varieties (alt.)Gamenya Lr3 1552; Gabo Lr10 1552; Kenya Farmer Lr10 1552; Lee Lr10 1552; Pastor Lr46 10928; Timstein Lr10 1552; Brambling Lr14a Lr34 10563.
Type varietiesAltar 84 1058: Gaza 11601; Tamoroi 11601.
Marker associationsAssociated with Xksu904(Per2)-2B 90; SSR and KASP markers were developed in 11601. A QTL, which is likely to correspond to Lr23 , was identified in the Opata 85/W-7984 (ITMI) RIL mapping population. The resistance was contributed by W-7974 0090.

LR24

Lr24
NoteDerived from Thin. elongatum . Always present with Sr24 956. See Sr24 (Reaction to P. graminis ).
SynonymLrAg 141
Chromosome3DL
iTc+Lr24 (ex Agent).
VarietiesCody 1284; Cutter 10595; Jagalene 10595; McCormick 10595; Ogallala 10595; Osage 143; Payne {1390, 1024}; SST 23 1324; SST 44 = T4R 1324; Timpaw 1255; Torres 128; Wanken 1255; Australian genotypes 340.
Varieties (alt.)Blueboy II Lr1 Lr10 141; Fox Lr10 141; Lockett Lr9 10146; Parker 76 Lr10 {1024, 143}; Siouxland Lr26 1283.
Marker associationsCo-seg of Lr24 in Agent with 8 RFLP markers; segment in Sears' 3D-3Ag#1 is shorter than in Agent 48; Tagged with Xpsr1203-6B 1271; cosegregation with RAPD marker that was converted to a SCAR 231; Linked with SCAR marker SCS73719 earlier thought to tag Lr19 10147. Australian white seeded cultivars with Lr24 were recombinants derived from Sears’ translocation lines 3Ag#3 and 3Ag#14.
1BL 185 = T1BL.1BS-3Ae#1L 600

LR25

Lr25
NoteDerived from S. cereale cv. Rosen. 4BS389, 271, 270, 380. Revised to T
Chromosome4BS
4BL-5RL 543 and later to T4BS.4BL-2R#1L.

LR26

Lr26
NoteDerived from S. cereale . See also Reaction to P. graminis, Sr31 ; Reaction to P. striiformis, Lr26 . T
Chromosome1BL
Chromosome1RS
1R (1B).

LR27

Lr27
NoteOne of two complementary genes; the second gene, Lr31 , is located in chromosome
Chromosome4BS
The following wheats have both Lr27 and Lr31 . Lr27 is present in wheats with Sr2 , but is not expressed in the absence of the complementary factor 1366. [ LrGt 1366, A {1058, 1366}]. 3BS 1367.

LR28

Lr28
NoteDerived from Ae. speltoides . 4AL 967 = T
Chromosome4AS
4AL-7S#2S 389.

LR29

Lr29
NoteDerived from Th. elongatum . 7DS 939 = T7DL-7Ae#
Chromosome1S
iSears' CS 7D/ Ag #11 {1300, 939}; RL6080 = Tc[*] 6/Sears' 7D/Ag#11 316.
Marker associationsCo-segregation with two RAPDs 1165.

LR30

Lr30
NoteRecessive 315.
SynonymLrT
Chromosome4AL
iRL 6049 = Thatcher[*] 6/Terenzio 315.
Varieties (alt.)Terenzio Lr34 315.

LR31

Lr31
NoteOne of two complementary genes, the second gene is Lr27 .
SynonymB {1058, 1366}
Chromosome4BL
VarietiesOcoroni 86 1373.
Varieties (alt.)Chinese Spring Lr12 Lr34 1367; See Lr27 for list of wheats with Lr27 +Lr31 .
Type varietiesBenimichi C2004 10585; Jupare C2001 10585.
Marker associationsA positive association with XksuG10-4B 1058.
Possible commonality with Lr12 .

LR32

Lr32
Chromosome3D
Chromosome3DS
iRL6086 = Tc*7/RL5713/Marquis K 10874; BW196 = Katepwa*6/RL5713/2*Marquis K 10874.
VarietiesTetra Canthatch/ Ae. tauschii RL5497-1, RL5713,
RL5713/Marquis-K 644.

LR33

Lr33
Chromosome1BL
iRL6057 = Tc[*] 6/PI 58548 {325, 297, 321}.
VarietiesPI 268454a 297; PI 58548 {325, 297}.
Varieties (alt.)KU168-2 Lr34 11687; PI 268316 Lr2c Lr34 297; Others 1322.
Marker associationsKASP markers flanking Lr33 in the centromeric region were identified in 11687.
LR34
TraesCS7D03G0183600
Lr34
NoteIn addition to conferring seedling and adult plant resistance, Lr34 responds in a complementary manner when combined with either Lr33 or LrT3 321. In the Thatcher background, Lr34 is associated with increased resistance to stem rust 299, 321. Although the resistance gene in the near-isogenic Thatcher line, RL6077, was considered to be Lr34 on the basis of disease response, leaf tip necrosis and its association with resistance to stripe rust, a cross with RL6058 segregated for two genes. A translocation to another chromosome was suggested 324.
SynonymLrT2 321
7DS 1058, 324. 7D 299.

LR35

Lr35
NoteDerived from Ae. speltoides 651. Adult plant resistance 651. 2B 651 = 2BL-2SL2SS#2.2SL#2 11037.
iRL6082 = Thatcher*7/RL5711 11037.
VarietiesRL5711 651.
Marker associationsA. SCAR marker was developed 9923.
Complete cosegregation between Lr35 and RFLP loci Xwg996-2B , Xpsr540-2B and Xbcd260-2B was observed. The RFLP probe BCD260 was converted to a CAPS and STS marker 0045. Lines with shortened alien segments are reported in 10741. Lines with shortened alien segments bearing Lr35 are described in 10741.

LR36

Lr36
NoteDerived from Ae. speltoides .
Chromosome6BS
VarietiesCDC Bounty 11253; Line 2-9-2 292; Line E84018 292.
alAe. speltoides Popn. 2 292.
Marker associationsXcfd13-6 **–

LR37

Lr37
NoteDerived from Ae. ventricosa . Recessive 667. Lr37 can be detected in seedlings at low temperatures (17[o] C) and is effective in adult plants under field conditions. See also Sr38 (Reaction to P. graminis ) and Yr17 (Reaction to P. striiformis )
Chromosome2AS
6M[v] = 2MS-6MS.6ML or 2MS-6ML.6MS 0009. VPM1 and derivatives: 2AS 62 = 2AL.2AS-2N[v] S0213

LR38

Lr38
NoteDerived from Th. Intermedium . 1DL = T
Chromosome1DS
1DL-7Ai#2L 389, 390.

LR39

Lr39
NoteDerived from Ae. tauschii 02100. Lr41 215. LrT 11207.
Chromosome2DS
iTC*4 / Overley, GSTR 447 11498.
VarietiesAmour 11086; Bullet 11086; Fuller 10595; KS90WGRC10 = TAM107[*] 3/ Ae. tauschii TA2460 220; Overley {10595, 10699}; Postrack 10830; PostRock 11093; PBW114 / Ae. tauschii PAU14195 // 4*WH542 backcross selections 11207; TAM112 {11086; TA4186 = TA1675[*] 2/Wichita 02100; Thunderbolt02100; Winterhawk 11086.
Varieties (alt.)Fuller Lr17a 10699; WGRC16=TAM107*3/ Ae. tauschii TA 2460 220.
dvAe. tauschi PAU14195 11207; Ae. tauschii TA 1675 2100; Ae. tauschii TA2460 Lr21 {10415, 220}; Lr21 10415,220. **ma:
LR40
Deleted, see LR21 .
Lr40
LR41 Deleted , see LR39 .
Lr41
LR42 . AET1Gv20040300 .
Lr42
Chromosome1D
iTC*4 / Century, GSTR 448 11498; Tc + Lr42 PI 701841 {J. Kolmer pers. com Feb 2023}.
VarietiesAR93005 10840; Fannin 10595; KS93U50 {M22059}.
Varieties (alt.)KS91WGRC11
Lr24 10840, 218; Quaiu 3 Lr46 10943.
Lr43

LR44

Lr44
Chromosome1B
iRL6147 = Thatcher[*] 6/ T. spelta 7831 322.
VarietiesT. spelta 7831 322; T. spelta 7839 322.

LR45

Lr45
NoteDerived from Secale cereale . 2A = T2AS-2R#
Chromosome3S
2R#3L 389, 958.

LR46

Lr46
NoteCompletely linked with Yr29 0119. Adult plant resistance.
Chromosome1B
Chromosome1BL
Sources / synonymsLalbahadur(Pavon 1B) Lr1 1364; Lalbahadur(Parula 1B) 10281.
VarietiesAttila 10281; Kundan 11248; Siete Cerros 10817.
Varieties (alt.)CI 13227 Lr3c ; Frontana Lr13 Lr14b Lr34 Lr68 10817; Pavon F76 Lr1 Lr10 Lr13 {1364, 119}; Parula Lr13 Lr34 10281; Parula Lr3b Lr13 Lr14b Lr34 Lr68 10817; Quaiu 3 Lr42 10943; Saar Lr34 10481.
Type varietiesPresent in the following tetraploid wheats in combination with other genes/QTL: Bairds 11600; Dunkler {M23032}; Heller#1 {M23032}.
Marker associationsAn RFLP marker associated with Lr46 with a recombination value of about 10% was identified in0119; Xwmc44-1B – 1.4 cM – Xbac24prot – 9.5 cM – Lr46 – 2.9 cM – Xbac17R.......Xgwm140-1B 10281; Xwmc44-1B – 3.6 cM – Lr46 2.1 cM – XtG818/Xbac17R......Xgwm140-1B 10281; XSTS1BL2 – 2.2 cM – Lr46/XSTS1BL9 – 2.2 cM – XSTS1BL17 10326. Associated with Ltn2 and Yr29 .

LR47

Lr47
NoteDerived from Ae. speltoides 9901. 7AS = Ti7AS-7S#1S-
Chromosome7AS
Chromosome7AL
VarietiesBionta 2004 10737. Pavon derivative PI 603918 9901. Backsross derivatives based on Express, Kern, RS15, Yecora Rojo and UC1041 {0126, 11721}. Recombinants with reduced 7S#1 segments 11721.
cLr47 was identified as a CNL, which was also present Ae. speltoides accessions T2140002, Y162 and Y397 11721.
7A = T7AS-7S#1S.7S#1L 389.

LR48

Lr48
NoteAdult plant resistance 0085. Recessive 0085.
Chromosome2BS
Chromosome4BS
iCSP44 / 5*Lal Bahadur AUS91421 0329.
Varieties (alt.)CSP44 Lr34 0085; Dove Lr34 0329.
Marker associationsXgwm429b-2B – 6.1 cM – Lr48 – 7.3 cM – Xbarc7-2B 329; RAPD markers flanking Lr48 at 2.7 and 8.6 cM are reported in 10738; Xwmc175-2B – 10.3 cM – Lr48 – 2.5 cM – Xwmc332-2B 10842; Centromere 27.5 cM – Lr48 (est.) 10842; Xgwm429b-2B – 4.2 cM – Sun563/Sun497 – 0.6 cM – IWB31002/IWB39834/IWB3432/IWB72894/Lr48 – 0.3 cM – IWB70147 – 2.0 cM – Xbarc67-2B 11112; Xsun563/Xsun497 – 0.6 cM – 5 SNP markers/ Lr48 – 0.3 cM – IWB70147 – 2.0 cM – XBARC0-7-2B – 9.4 cM – Lr13 11172.
Lr48 is closely linked with Lr25 10738. Based on haplotype analysis Lr48 was postulated in 13 Australian Condor relatives 11112. The suggestion that this gene is present in 13 Australian varieties carrying Lr48 markers and hence Lr48 11172 needs verification.

LR49

Lr49
NoteAdult plant resistance 0085.
Chromosome2AS
Chromosome4BL
iVL404 / 5*Lal Bahadur Lr34 0329.
Varieties (alt.)Tonichi Lr34 0329; VL404 Lr34 0085.
Marker associationsXbarc163-4B – 8.1 cM – Lr49 – 10.1 cM – Xwmc349-4B 0329; Xgwm251-4B – 8.6 cM – XsunKASP21 – 0.4 cM – Lr49 – 0.6 cM – XsunKASP24 – 8.1 cM – Xwmc349-4B 11484.

LR50

Lr50
NoteBased on linkage with SSR markers.
Chromosome2BL
VarietiesKS96WGRC36 = TAM[*] 3/TA870 0221; U2657 = Karl 92*4/TA674 0221; U3067 = TAM107*4/TA874 0221; U3193 = TAM107*4/TA874 0221.
Type varietiesT. armeniacum TA870 0221; T. armeniacum TA145; TA874 0221; TA870 0221; TA895 0221.
Marker associationsLinked with Xgwm382-2B (6.7 cM) and Xgdm87-2B (9.4 cM) 0221.

LR51

Lr51
Chromosome1BL
iExpress[*] 7/T1 0308; Koln[*] 7/T1 308; UC1037[*] 7/T2 0308.
VarietiesNeepawa[*] 6/ Ae. speltoides F-7, selections 3 and 12 306; Interstitial translocations T1AS.1AL-1S#F712L-1AL 0308 = T1; T1BS.1BL-1S#F7L-1BL 0306.
alAe. speltoides F-7 selections 3 and 12 0306.
Marker associationsLinked with RFLP markers Xmwg710-1B and Xaga7-1B 0308; A CAPS marker was developed from XAga7-1B 0308.

LR52

Lr52
SynonymLrW 309
Chromosome5BS
Chromosome bin5BS6-0.81-1.00.
VarietiesAUS28183 = V336 10679; AUS18187 10679; Tc-LrW = RL6107 10035.
Varieties (alt.)V618 Lr33 309; V336 Lr33 LrB 309.
Xgwm234-5B – 10.2 cM – Lr52 – 3.3 cM – Yr47 – 9.6 cM – Xcfb309-5B 10679; Xcfb309-5BXsun480/Xmag705/Xfcp552-5B – 0.4 cM – Yr47 – 4.3 cM – icg16c008/Xgwm234-5B 11200; Xsun180 – 0.4 cM – Lr52 – 0.2 cM – Yr47 – 1.4 cM – Xgwm234-5B 11200.

LR53

Lr53
SynonymLrS8 10204
6BS 10203; According to 11778 Lr53 originated from Ae. longissima or Ae. sharonensis ; 6[S] S.6[S] L-6BL 117787.

LR54

Lr54
NoteDerived from Ae. kotschyi .
Chromosome2DL
VarietiesLine S14 10139.
adLine 8078 10139.
alAe. kotschyi 617 10139.

LR55

Lr55
NoteDerived from Elymus trachycaulis 10180. 1B (
Chromosome1BL
Chromosome1H
VarietiesKS04WGRC45 = Heyne*3/TA5586.

LR56

Lr56
SynonymLrS12 10204
6A (6AL-6S[sh] L.6S[sh] S) 10224.

LR57

Lr57
NoteDerived from Ae. geniculata . 5DS (
Chromosome5DL
5DS-T5MS[G ] 10328.

LR58

Lr58
NoteDerived from Ae. triuncialis = T
Chromosome2BS
2BL-2[t] L(0.95). 2BL 10375.

LR59

Lr59
NoteDerived from Ae. triuncialis . 1A, probably 1AS alien centric fusion 10399.
VarietiesLine 0306 10399 = Ae. peregrina -680/2*CS//5*W84-17 10399.
alAe. peregrina (UUSS, 2n=28) 680 10399.
Problems in recovering balanced recombinants are reported in 10762. Further study of this translocation (Lr59-Full) identified a 1AS.1L[P] -6S[P] -6BS structure. Another round of recombination identified the following types: 1AS.1L[P] -1AL; 1AS.1L[P] -6S[P] -6BS; and 1AS.1AL-1L[P] -6S[P] - 6BS (Line Lr59-151 had the shortest alien segment). Recombinants with 6BS retained the wheat GLI-B2 locus 11499.

LR60

Lr60
SynonymLrW2 0305
Chromosome1DS
VarietiesRL6172 0305 = Thatcher*3/V860.
Marker associationsLr60 – 8.4 cM – Xbarc149-1D/Lr21 10400; Lr60 – 13 cM – Lr21 10400.

LR61

Lr61
SynonymLrAW2 11223
Chromosome6BS
Type varietiesAUS 26579 11224; AUS 26582 11224; Guayacan 2 10485; Guayacan INIA 10485; PI 244061 11280.
Marker associationsLr61 – 2.2 cM – P81/M70 269/P87/M75131 4.6 cM – P87/M76 149 21.7 cM – Xwmc487-6B 10485; sun682 – 0.7 cM – Lr61/sun683/sun684 – 0.2 cM – sunKASP60 11223; sun682 – 0.6 cM – Lr61/sun684 – 0.6 cm – sunKASP59 11223.
The designation LrAW2 was also used for Lr82 .

LR62

Lr62
NoteDerived from Ae. neglecta 6A = 6AL-6[Aen] L.6[Aen] S 10537.
VarietiesLine 03M119-71A 10537.
alAe. neglecta 155 10537. Associated with Yr42 10537.

LR63

Lr63
NoteDerived from T. monococcum
Chromosome3AS
iRL6137 = Thatcher*6/TMR5-J14-12-24 {10646, 10875}.
VarietiesTMR5-J14-12-2410646.
dvT. monococcum 10646.
Marker associationsXbarc321/Xbarc573A – 2.9 cM – Lr63 10875.

LR64

Lr64
Chromosome6AL
iRL 6149 = Thatcher*6/ T. dicoccoides 8404 LrX 10550.
VarietiesTc/RL6149-RIL13, GSTR 451{11399, 11498}.
Type varietiesT. dicoccoides 8404 10550.
Marker associationsXbarc104-6A – 13.9 cM – Lr64 – 21.9 cM – Xgwm427-6A 10550; K-IWB38521 – 1.0 cM – Lr64/K-IWB59855 – 2.9 cM – K-IWB72197 – 10 cM – K-IWB73609 11399. The second recessive gene ( LrX ) in RL6149 was located in chromosome 1DS: K-IWB577 – 11.2 cM – LrX/IWB38437 11399.

LR65

Lr65
SynonymLrAlt 10739
Chromosome2AS
VarietiesSelection ARK 0; 10848.
Varieties (alt.)T. spelta Altgold Rotkorn Lr71 {10739, 10848}.
Marker associationsLr65 – 1.8 cM – Xbarc212-2A/Xwmc382-2A – 2 cM – Xgwm636 10739; XE41M57-165 – 3 cM – Lr65 – 2 cM – Xbarc124/Xbarc222/Xgwm614-2A 10848; LR65 – 0.5 cM – Alt-64 – 0.05 cM – Alt-21 – 1.7 cM – Xbarc212-2A 11536; AltID-11 – 0.7 cM – Lr65 – 0.02 cM – Alt-64 – 1.1 cM – Alt21 11536. TraesCS2A02G001500 was predicted as the candidate position for LR65 11536. LR65 was estimated to be about 10 cM from LR17 10848. Some plants of Altgold Rotkorn possess Lr71 conferring IT 12C 10848.

LR66

Lr66
NoteLrS13 10592.
Chromosome3A
3A = 3A-3S[S] .

LR67

Lr67
NoteAdult plant resistance.
Chromosome4DL
Chromosome binC-0.53 10675; Distal to 0.56 10678.
iRL6077 = Thatcher*6/PI 250413 10675.
VarietiesChapingo 48 11070; PI 250413 10676; Yaqui 53 11070. v2 NP876 Lr46 11441; Sujata Lr46 {11440, 11442}.
Marker associationsXcfd71-4D – 1.5 cM – Lr67 10675; Pleiotrophic with Yr46 ; Close linkage with Xcfd71-4D and Xbarc98-4D estimated at 4.4 cM, and Xcfd23-4D at 5.2 cM (all on the same side of Lr67/Yr46 10678; Xgwm165-4D/Xgwm192-4D – 0.4 cM – Yr46/Lr67 10678.
cThis multiple disease resistance locus was identified as a hexose transporter most similar to the STP13 family and containing 12 predicted transmembrane helices 11070; GenBank: coding sequence KR604817.2, 1,545 bp; protein sequence ALL26331.2, 514 amino acids. Lr67 was predicted in 51 accessions mainly collected in the Indian subcontinent 11448 using the gene-specific marker SNP1-TM4 11070. Lr67 is pleiotropic or closely linked with Sr55 , Yr46 , Pm46 and Ltn3 .

LR68

Lr68
NoteAdult plant resistance.
Chromosome7BL
VarietiesArula 1 CIMMYT GID 1847450 10817; Arula 2 CIMMYT GID 1847422 10817.
Varieties (alt.)Arula 1 Lr14b CIMMYT GID 1847450 10817; Arula 2 Lr14b CIMMYT GID 1847422 10817; Frontana Lr13 Lr14b Lr34 Lr46 10817; Parula Lr3b Lr13 Lr14b Lr34 Lr46 10817; Rayon F89 Lr14b 10817; Sujata Lr46 Lr67 11442; Weebill Lr14b 10817.
Marker associationsClose linkage with several markers in chromosome arm 7BL and Lr14b in the Apav x
Arula population. Flanking markers are Xpsy1-1 and Xgwm146-7BL at 0.4 and 0.6 cM. Gammairradiation induced deletion stocks of Arula 1 that lack LrP but have Lr14b were identified showing that the two genes are located at different closely linked loci 10817; Xwmc232-2B – 0.2 cM – Xcfa2257-2B – 1.1 cM Cs7BLNLRR 0.3 cM – Psy1-1 – 0.5 cM – Lr68 – 0.6 cM – Xgwm146-2B 10817; Gamma-irradiation induced deletion stocks of Arula 1 lacked Lr68 but had Lr14b showing that the two genes are located at different closely linked loci 10817.

LR69

Lr69
Chromosome3DL
VarietiesToropi-6.3 10903.

LR70

Lr70
Chromosome5DS
VarietiesYet to be named selection of cross or backcross to Tc 10904.
Varieties (alt.)KU3198 Lrk1 10904.
Marker associationsLr70 – 5.6 cM – Xbarc130-5D – 1.7 cM – Xwmc233-5D 10904. Lrk1 is possibly Lr52 10904.

LR71

Lr71
SynonymLrAK12c 10910
1B centromere region not resolved 10911.

LR72

Lr72
Chromosome7BS
Type varietiesAltar C84 GID 30374 10947; Atil C2000 GID 6719128.
tv2Storlom Lr3a 10947; Llareta INIA Lr14a 10947; Jupare Lr27 + Lr31 10947.
Marker associationsLr72 – 5.5 cM – Xwmc606-7B 10947.

LR73

Lr73
Chromosome2BS
VarietiesMorocco 10969; Several Australian cultivars 10969.
Varieties (alt.)Federation LR10 10969;
Marker associationswPt8760 – 4 cM – Lr73 – 1.4 cM – wPt8235 10969.

LR74

Lr74
NoteAdult plant resistance
Chromosome3BS
Chromosome bin3BS8-0.78-0.87.
VarietiesAGG91583WHEA=BTSchomburgk Selection 11031; Spark 11031.
Marker associationsXcfb5006-3B – 1.9 cM – Lr74 – 2.2 cM – BS00009992 – 2.7 cM – Xgwm533-3B 11031.
Tc*3 / Caldwell population: a gene for adult plant resistance derived from Caldwell was identified with closest marker Xcfb5006-3B ; the Tc*2 / Caldwell 24-1 parent shared the same T allele at KASP marker IWB44132 as Spark and BT-Schomburgk Selection 11281.

LR75

Lr75
NoteAdult plant resistance.
SynonymQlr.sfr-1BS 10066
Chromosome1BS
Chromosome bin1BS10-0.51.00.
VarietiesArinaLr75, Arina*2//Forno/Arina#F7NIL85 11053; C14.20 11053.
Varieties (alt.)Forno Lr14a Lr34 11053.
Marker associationsXgwm604-1B 1.6 – cM – Lr75 – 2.70 cM – swm271 – 0.14 cM – Xgwm11-1B/Xgwm181B/swm294/swm278/swm275 11053.

LR76

Lr76
NoteDerived from Ae. umbellulata .
SynonymLrUmb 11055
Chromosome5DS
VarietiesIL 393-4 11055; T. durum cv. WH890/ Ae. umbellulata Pau 3732 // CS Ph[I] /3/2*WL711, C14.21 11055.
alAe. umbellulata Pau 3732 11055.
Marker associationsLr76 – 7.6 cM – Xgwm190-5D 11055. Lr76 behaves as an allele of Lr57 derived from Ae. geniculata . The low infection types are also different. A co-segregating 450 bp Lr57-Yr40 -CAPS16 marker was present in IL 393-4, but not in many Australian wheat cultivars 11055. The introgression carrying the Ae. umbellulata segment replacing terminal Chr. 5DS was 9.47 Mb with the break point between TraesCS5D02G1600 and TraesCS5G02G20010 11552. Independent mutations indicated that Lr76 and Yr70 were different genes 11552.

LR77

Lr77
NoteAdult plant resistance.
Chromosome3BL
VarietiesTc*2 / Santa Fe 8-1C.9 11164; Tc*2 / Toropi GSTR 449 11164
Varieties (alt.)Duster Lr3a Lr11 Lr34 PI 639233 11164; Santa Fe Lr3a Lr37 PI 641772 11164.
Marker associationsIWB2531 – 3.5 cM – IWB32805 – 3.5 cM – Lr77/IWB10344 – 0.9 cM – IWB73555 – 5.3 cM – IWB12260 11164.

LR78

Lr78
NoteAdult plant resistance.
SynonymQLr.cdl.5D 11212
Chromosome5DS
Chromosome binAccording to 10125 Xbarc130 is in bin 5DS2-0.78-1.00 and Xcfd189 is in bin 5DS1-C-0.63.
VarietiesTc *2 / Santa Fe GSTR 450 11498. Tc*3 / Toropi 4A212A 11212.
Varieties (alt.)Toropi PI 344200 11212.
Marker associationsXcfd1895D – 13.2 cM – IWA2689 – 2.2 cM – Lr78 – 8.0 cM – Xcfa2104-5D 11212. }.
A second selection Tc*2 / 3A12A crossed with Tc segregated for multiple QTL in chromosome arms 1BL (possibly LR46 ), 3BS and 4BS 11212.

LR79

Lr79
SynonymLrAW3 11224
Chromosome3BL
Chromosome bin3BL-0.63-0.90.
Type varieties242/Bansi#149, C18.15 11224.
tv2AUS26582 Lr61 {11223, 11224}.
Marker associationsKASP31457 – 8.1 cM – sun770 – 2.9 cM – Lr79 – 1.8 cM – sun786_ 11224.
Lr79 conferred resistance to Australian common wheat Pt races, but not to durum-specific Ethiopian and Californian races 11224.

LR80

Lr80
SynonymLrH2 11464
Chromosome2DS
VarietiesHango-2, FLW6-Selection AGG95499WHEA 11464.
Marker associationsXgdm35-2D – 7.5 cM – Xcau96-2D – 0.4 cM – Lr80 – 0.2 cM – Xbarc124-2D – 13.2 cM – Xgwm296-2D 11464. Xcau96-2D – 4.0 cM – KASP17425 – 0.2 cM – Lr80 – 0.4 cM – KASP17148 – 1.0 cM – Xbarc124-2D 11464.

LR81

Lr81
NoteLr470121 11583.
Chromosome2AS
Chromosome bin2AS-0.78-1.00.
VarietiesRIL 92 PI 700925 11583.
Varieties (alt.)PI 470121 Lr34 11583.
Marker associationsXwmc827-2A – 9.4 cM – Xstars-KASP320 – 0.5 cM – LR81 – 0.2 cM – Xstars-KASP323 – 5.3 cM – Xwmc296-2A 11583.

LR82

Lr82
NoteLrAW2 11586. Recessive.
Chromosome2BL
VarietiesAus27352 11586.
Marker associationsKASP22131 – 0.8 cM – Lr82 – 1.2 cM – KASP11333 11586. The designation LrAW2 was also used for Lr61 .

LR83

Lr83
NoteLrX 11399. Recessive.
Chromosome1DS
VarietiesPI 701502 11638.
Varieties (alt.)RL6149 Lr60 {11399; 11638}.
Marker associationsK-IWB38437 – 1 cM – LR83 – 8.6 cM – 1D9037237 – 4.7 cM – K-IWB577 11638. LR83/IWB38437 – 11.2 cM – K-IWB577 11399. Locus order: LR83LR60 – LR42 – LR21_ 11638.
LR84 . TRITD6Bv1G225630 (Svevo).
Lr84
NoteQLr.cim-6BL ) 11600; QLr.hzau-6BL 11640; TtRPM1-630 11640. Adult plant resistance.
Chromosome6BL
Type varietiesAtred#2+6BL 11640; Atred#2 / Bairds RIL 397 GID 7013103 {11600, 11640}.
tv2Bairds {M11600, 11640}; Dunkler {11639, 11640}; Heller#1 {11639, 11640}; Planeta 11640.
Marker associationsIWB8763LRXXIWB10767 (0.9 cM. 131.6 Kb) 11640.
cNBL-LRR structure annotated as an RPM1 -like gene 11640.

LR85

Lr85
Note6B (6B-6S[sh] ) {11683, 11684, 11712}.
VarietiesLine 6B-RY-32-3-14 11683 = Line 42 11684 = D42 11712 = Genebank accession number to be advised .
alAe. longissima AEG-67822 11712; Ae. sharonensis AEG-548-4 {11683; 11712}.
cThe same NLR gene with a distinctive coiled-coil (CC) domain was cloned from each alien diploid accession 11712. Development of lines with shortened 6S[sh] segments is described in 11684. All 16 EMS-induced mutants in Line D42 were susceptible to both leaf rust and stripe rust 11712.
LrAc
NoteAdult plant resistance.
Chromosome5DS
VarietiesAe. caudata derivative PAU16060 11613.
alAe. caudata PAU3556 11613.
LrAp
Note6BL =
Chromosome6BS
6BL-6U[P] 11698.
LrBi16
Chromosome7BL
Chromosome bin7BL-10.
VarietiesBimai 16 11042.
Marker associationsZcfa2257-7B – 2.8 cM – LrBi16 – 2.6 cM – Xgwm344-7B 11042; Xcfa2257-7B – 2.8 cM – LrBi16 – 2.5 cM – Xgwm344-7B 11082; A closer AFLP marker could not be converted to a STS/SCAR marker11082. Bimai 16 also carries Lr26 and LrZH84 11042. Allelic with Lr14c , but showed different reaction patterns compared to lines with Lr14c and LrFun 11082.
LrFun
Chromosome7BL
Chromosome bin7BL-10.
VarietiesFundulea 90 11038.
Marker associationsXgwm344-7B – 4.4 cM – LrFun – 5.7 cM – Xwmc70-7B 11038.
LrGam6
Chromosome2BL
Varieties (alt.)Sinvalocho MA Lr3 LrSV1 LrSV2 10929.
Marker associationsXbarc-2B – 0.6 cM – Xgwm382-2B – 0.6 cM – LrGam6 – 17.9 cM – Xgwm528-2B 10929.
LrK1
Chromosome5BS
Varieties (alt.)Ku3198 Lr70 10904.
Marker associationsLrK1 – 0.6 cM – Xcfd20/Xgwm234-5B 10904. LrK1 could be Lr52 or an allele 10904.
LrKr1
VarietiesThatcher 10233.
Varieties (alt.)Kanred LrKr2 10233.
LrKr2
Varieties (alt.)Kanred LrKr1 10233.
LrMq1
VarietiesMarquis 10233.
LrNJ97
Chromosome2BL
VarietiesNeijiang 977671 11043.
Marker associationsXwmc317-2B – 4.2 cM – LrNJ97 – 2.2 cM – Xbarc159-2B – 2.3 cM – Xwmc356-2B 11043.
LrP
Chromosome5DS
VarietiesAe. peregrina derivative PAU16058 11614.
alAe. peregrina PAU3519 11614.
LrPI244061
Chromosome2BS
Type varietiesPI 244061 11280. ma : LrPI144061 – 11.5 cM – KASP2BSIWB6117 11280. This gene might be Lr13 11280.
LrPI287263
Chromosome6BL
Type varietiesPI 287263 11280. ma : LrPI287263 – 2.8 cM – KASP6BLIWB44753 – 2.8 cM – Xdupw217 11280.
LrPI209274
Chromosome6BS
Type varietiesPI 209274 11280.
Marker associationsKASP6BSIWB39456 – 3.7 cM – LrPI209274 – 1.0 cM – KASP6BSIWB6117 – 8.1 cM – Xdupw217-2B 11280. This gene may be Lr53 11280.
LrSV1
NoteAdult plant resistance.
Chromosome2DS
Varieties (alt.)Sinvalocho MA Lr3 LrGam6 LrSV2 10929.
Marker associationsXgwm296-2D – 1.4 cM – LrSV1 – 7.1 cM – Xgwm261-2D 10929.
LrSV2
NoteAdult plant resistance.
Chromosome3BS
Varieties (alt.)Sinvalocho MA Lr3 LrGam6 LrSV1 10929.
Marker associationsXgwm389-3B – 3.0 cM – LrSV2/Xgwm533-3B – 4.2 cM – Xgwm49-3B 10929.
According to 11334 LrSV2 acted in a complementary way with Lrc- SV2 on chromosome 4BL. These complementary genes were closely linked to the locations of Lr27 and Lr31 but were considered to be different genes.
LrTb
NoteAdult plant resistance 820.
Varieties (alt.)AC Taber Lr13 Lr14a 820.
LrTm
dvT. monococcum .
Marker associationsLinked to microsatellite locus Xgwm136 277.
LrTr
VarietiesAe. triuncialis derivatives 227.
adWL711 BC2F5 addition lines 227.
alAe. triuncalis Acc. 3549 227.
Marker associationsLines with LtTr possessed a homologue of Xgwm368-4B 227.
LrTt1
NoteReccessive 10031.
SynonymlrTt1 10031
Chromosome2A
VarietiesLine 842 = Saratovskaya*2/ T. timopheevii spp. viticulosum 10031.
Marker associationsXgwm812-2A – 1.5 cM – LrTt1 10031.
LrVPM
Chromosome7DL
GERMPLASM?
LrW2
A gene, identified only as Lr , was transferred to wheat chromosome 2AS from 6M[v] 113: cosegregating markers were Xpsr933-2A and Xpsr150-2A . GERMPLASM
LrWo
Chromosome5B
Type varietiesWollaroi AUS99174 10747.
Marker associationsXgwm234-5B – 7.2 cM – LrWo – 20.3 cM – wPT-1420 10747.
The relationship of LrWo to Lr52 was not established.
LrZH84
Chromosome1BL
VarietiesGuizhou 98-18 11042; Tian 95HF2; Xinong 1183-4 11042; Zhoumai 11 10682.
Varieties (alt.)Predgornaia 2 Lr26 10581; Zhou 8425B Lr26 10581.
Marker associationsXbarc8-1B (cent) 5.2 cM – LrZh84 – 3.9 cM – Xgwm582-1B 10581.
Lr64i#2
Synonym6Ai#2 11079
VarietiesTulaikoskaya 5 11079; Tulaikoskaya 10 11079; Tulaikoskaya 100 11079.
A series of temporary designations for seedling and adult plant resistance genes in six durums is given in 1648. A potentially novel resistance gene was located in chromosome 5BS of Iranian landrace PI 289824. Xgwm234-5B – 8.9 cM – Lr – 2.3 cM STS Xtxw 200 10253. Complex genotypes AC Domain: Lr10 Lr16 Lr34 820. AC Splendor: Lr1 Lr16 Lr34 10179 AC Teal: Lr1 Lr13 Lr16 821 Alsen: Lr2a Lr19 Lr13 Lr23 Lr34 10152 Alsen: Lr2a Lr10 Lr13 Lr23 Lr34 10223. Benito: Lr1 Lr2a Lr12 Lr13 1256. Buck Manantial: Lr3 Lr13 Lr16 Lr17 Lr34? 300. Carberry: Lr21 Lr16 Lr23 Lr34 Lr46 11567. Coker 9663: Lr9 Lr10 Lr14a 10742. Duster: Lr34 Lr46 Lr77 11369. Estanzuela Benteveo: Lr13 Lr26 Lr34 10980. Estanzuela Pelon: Lr1 Lr17a Lr26 Lr34 10980. Estanzuela Tarariras: Lr3bg Lr13 Lr34 10980. Era: Lr10 Lr13 Lr34 342. Grandin: Lr2a Lr3 Lr10 Lr13 Lr34 821. INIA Boyero: Lr13 Lr26 Lr34 10980. INIA Churrinche: Lr10 Lr24 10980. INIA Tero: Lr17a Lr24 10980. Mango: Lr1 Lr13 Lr26 Lr34 1374. MN7529: Lr1 Lr2a Lr10 Lr16 976. Norm: Lr1 Lr10 Lr13 Lr16 Lr23 Lr34 {10152, 10223} Opata 85: Lr10 Lr27+Lr31 Lr34 1058. Pasqua: Lr11 Lr13 Lr14b Lr30 Lr34 304. Pioneer 26R61: Lr13 Lr14b Lr26 10742. Prospect: Lr1 Lr2a Lr10 Lr13 197. Roblin: Lr1 Lr10 Lr13 Lr34 303, 713. Trap: Lr1 Lr3 Lr10 Lr13 Lr34 1374. Genotype lists: Australian cultivars 0288; Chinese cultivars {0013, 10682, 11310}; Combinations with Lr34 1361; Cultivars from the former USSR 1380; Czechoslovakian/Czech cultivars855, 0102, 11717; European cultivars {0229, 0260, 0288, 0337,10345, 10794}; Indian cultivars {1365, 1345}; Indian Subcontinent 1365; Mexican cultivars 1373; U.S.A. cultivars 1219, 978, 0334, 10111, 10146, 10152, French cultivars 10792, Croatian cultivars 11135. Kazakhstan cultivars 11161, see also 970. See 11178 for review and analysis of leaf rust resistance genes in six durum wheats.

SULR23

SuLr23
NoteSuppressing allele.
Chromosome2DS
VarietiesAltar 84/ Ae. tauschii 219 1058.
suLr23
NoteNon-suppressing allele.
VarietiesOpata 85 1058. See also evidence for specific suppression in 948.
QLr.pser.1BL
Chromosome1BL
Chromosome bin1BL6-0.32 10743.
Marker associationsProximal to Xgwm264.1-1BL 10743. Associated with lm producing a lesion mimic phenotype in the absence of disease 10743.
QLr.sfr-1B
Chromosome1BS
VarietiesForno/ T. spelta cv. Oberkulmer mapping population; the resistance was contributed by Forno 0050.
Marker associationsAssociated with Xpsr949-1B and Xgwm18-1B 0050.
QLr.sfr-2B
Chromosome2B
VarietiesForno/ T. spelta cv. Oberkulmer mapping population; the resistance was contributed by Oberkulmer 0050.
Marker associationsAssociated with Xpsr924-2B and Xglk699-2B 0050.
QLr.sfr-3A
Chromosome3A
VarietiesForno/ T. spelta cv. Oberkulmer mapping population; the resistance was contributed by Forno0050.
Marker associationsAssociated with Xpsr570-3A and Xpsr543-3A 0050.
QLr.sfr-4B
Chromosome4B
VarietiesForno/ T. spelta cv. Oberkulmer mapping population; the resistance was contributed by Forno 0050.
Marker associationsAssociated with Xpsr921-4B and Xpsr593-4B 0050.
QLr.sfr-4D
Chromosome4DL
VarietiesForno/ T. spelta cv. Oberkulmer mapping population; the resistance was contributed by Forno 0050.
Marker associationsAssociated with Xglk302-4D and Xpsr1101-4D 0050.
QLr.sfr-5D
Chromosome5DL
VarietiesForno/ T. spelta cv. Oberkulmer mapping population; the resistance was contributed by Oberkulmer 0050.
Marker associationsAssociated with Xpsr906-5D and Xpsr580-5D 0050.
QLr.sfr-7B.1
Chromosome7B
VarietiesForno/ T. spelta cv. Oberkulmer mapping population; the resistance was contributed by Forno 0050.
Marker associationsAssociated with Xpsr593-7B and Xpsr129-7B 0050.
QLr.sfr-7B.2
VarietiesForno/ T. spelta cv. Oberkulmer mapping population; the resistance was contributed by Forno 0050.
Marker associationsAssociated with Xglk750-7B and Xmwg710-7B 0050.
AGS 2038 (R) / UG111729 (MR) : RIL population. Seedling and adult plant resistance was controlled by several QTL, the most important of which was designated QLr.ags-1AL spanned by IWB20487 and IWA4022 11507. Avocet S / Attila: At least two additive genes for slow rusting 10586. In addition to Lr46 there were small effects on chromosomes 2BS, 2BL and 7BL 10586. Avocet R (S) / Chilero: Lr46/Yr29 and QLr.cim-5DS/QYr.cim-5DS , from Chilero, and QLR.cim1DL/QYr.cim-1DL from Avocet R 11306. Avocet / Kundan: RIL population: Lr29 (flanked by 10902272 and 02414 , R[2] = 0.5 -0.65), QLR.cim2BL flanked by 1237388 and 108178035C>T from Avocet and QLr.cim-2DS flanked by 1237388 and 108178035C>T from Kundan 11248. Avocet / Pastor: RIL population: QTLs mapped on 1BL ( Lr46 , 2BS, 5A, 6B and 7BL plus minor QTLs on 1B, 2A and 2D 10928. Avocet S / Pavon 76: QTL identified included: 1BL ( PstAFAMseCAC1&2 ), 4BL ( Xgwm368 ), 6AL ( Xgwm617 ), 6BL ( PstAGGMseCGA1 ) 10443. Beaver / Soissons : DH population: QTL for resistance to Australian pathotypes were located on 4-6 chromosomes over 3 years; the most consistent being 1B(1BL.1RS), 4BS (proximal to Xbarc20-4B ) and 5AS ( QTLBvr5AS , proximal to Xbarc10-5A ) and in the vicinity of wPt-8756 and wPt-1931 10687. Capo (R) / Arina (S) and Capo (R) / Furore (S): Four QTL on chr. 2AL, 2BL, 2BS and 3BS, were from Capo and one on 5BLwas from Arina; the QTL on 2AL, 2BL and 3BS were co-located with QTL for resistance to stripe rust 11449. CI 13227 (R) / Lakin (MS): DH population: Adult plant resistance conferred by QLR.hwwg-2DS (R[2] = 0.11 – 0.26), QLr,hwwg-7BL (R[2] = 0.08-0.19, likely Lr68 ), and QLr.hwwg-7AL from CI 13227, and QLr.hwwg-3BS from Lakin 11311. CI 13227 (R) / Suwon (S): SSD population 10211. Two QTLs for slow leaf rusting, located on chromosomes 2B and 7BL, were mapped for final severity, area under disease progress curve, and infection rate in a QLr.osu-2B was associated with microsatellite markers Xbarc18-2B and Xbarc167-2B (R[2] = 9-18%). QLr.osu-7BL was associated with microsatellite marker Xbarc182-7B (R[2] = 12-15%) 10211. CI 13227 constributed the resistant alleles for both QTLs. QLrid.ocu-2D , linked to Xgwm2612D , affected the duration of infection 10211. However, Thatcher backcross derivatives of CI 13227 appeared to have Lr3c and Lr46 11021. Libellula / Huixianhong: RIL population: Six QTL on chromosome arms 1AS, 1AL, 1BL ( Lr34 ), 3AL, 4BL and 7DL were detected in a least two of seven environments, the most effective of which was identified as Lr34 11757. Mianyang351-15 (R) / Zhengzhou 5389 (R): RIL population: four QTL were located on chromosome arms 1BL ( Lr46 ), 2AS ( Yr37 ), 2DS, and 7BL ( Lr68 ) 11545. Ning7840 / Clark : RIL population: QLr.hwwg-5AS from Ning 7840; QLr.hwwg-6AS from Clark, flanked by barc23-6A and IWA3321 ; Qlr.hwwg3BS.1 from Clark, flanked by IWA4654 and IWA1702 ; possibly Lr74 ; and QLr.hwwg-7DS/Lr34 from Ning 7840 11278. TA 4152-60 (MR) / ND495 (MR): DH population: Five QTLs for APR were identified in the field, viz. QLr.fcu-3AL (R[2] = 0.18), QLr.fcu-3BL (R[2] = 0.19), QLr.fcu-5BL (R = 0.07), and QLr.fcu-6BL (R[2] = 0.12) from TA 4152-60 and QLr.fcu-4DL (R[2] = 0.13) from ND495 10757. The 3AL gene also conferred seedling resistance to some races and the 3BL gene conferred resistance to race MFPS 10757. Thatcher*3 / Americano 44d: RIL population: QTL for adult plant resistance identified on chromosomes 3AS ( QLr.cdl-3A ), 3DS ( QLr.cdl-3DS ) and 6DS ( QLr.cdl-6D ); both the 3AS and 3DS QTLs were required for expression of resistance 11296. 26R61 (S) / AGS 2000 (R): RIL population. A single QTL ( QLr.uga-2BS ) flanked by wPt-666389 and wPt-2600 on chromosome arm 2BS was designated LrA2K 11507. LrA2K – 2.9 cM – Xwmc770-2B 11507. Review of QTL in hexaploid wheat 11442. Tetraploid wheat: Atred#1 / Dunkler: RIL population: Four QTL for APR, including Lr46 , QLr.cim-5BL and QLR.cim6BL from Dunkler and QLr.cim-2Bc from Atred#1 11639. Atred#1 / Heller#1: RIL population: Four QTL for APR, including Lr46 , QLr.cim-5BL and QLR.cim6BL from Dunkler and QLr.cim-2Bc from Atred#1 11639. Bairds (R) / Atred#1: RIL population: Four QTL for APR, including Lr46 , QLr.cim-5BL and QLR.cim6BL from Bairds and QLr.cim-2Bc from Atred#1 11600. Colosseo / Lloyd: A major QTL, QLr.ubo-7B.2 , for seedling and adult plant resistance from Colosseo, was located between Xgwm344.2-7B and DART 378059,

3.23. Reaction to Pyrenophora tritici-repentis (anomorph: Drechlera tritici -repentis)⌂ Home

Disease: Tan spot, yellow leaf spot. Virulence in the pathogen is mediated by host-specific toxins and host resistance is characterized at least in part by insensitivity to those toxins. Three toxins, Ptr ToxA, Ptr ToxB and Ptr ToxC have been identified (see 10153). Toxin sensitivity determined by use of toxins extracted from pathogen strains and resistance determined by infection experiments are treated as different traits, although common genes may be involved. A review is provided in 10690. Introgressions of genes for insensitivity to Ptr ToxA and Ptr ToxB are outlined in 10153.

Batavia (S) / Ernie (R): DH population tested over three years. Four (1A(Ernie), 7A, 2BS, 3BS (Batavia)), five (2BS, 5BL(E), 3D, 6A, 7D(B)) and four (2BS, 5BL(E), 1A, 6A(B),) QTL accounted for most of the variation in each year. The greatest effect across years was the QTL on chromosome 2BS (R[2] =0.382, 0.298 and 0.362, respectively). This QTL was validated in four additional populations 10782.

Grandin (S) / BR34 (R) : RIL population: QTL in 1BS, QTs.fcu-1BS , (13-29% of variation depending on race) and 3BL, (13-41%) were involved in resistance to 4 races. Five other QTL showed race specific responses 10248.

TA4152-60 (R) / ND495 (S): DH population: Five QTLs for resistance, all from TA4152-60 10580, viz., QTs.fcu-2AS and QTs.fcu-5BL.1 conferring resistance to all races used, QTs.fcu-5AL conferring resistance to races 1, 2 and 5, QTs.fcu-5B.2 conferring resistance to races 1 and 2, and QTs.fcu-4AL conferring resistance to race 3.

WH542 (R) / HD29 (S): RIL population: SIM indicated QTL on chromosomes 1B, 3AS, 3BL, 5B and 6BS, but only two were confirmed by CIM, Qts.ksu-3AS flanked by Xbarc45-3A and Xbarc86-3A (LOD 5,4, R[2] = 0.23) and Qts.ksu-5BL (probably Tsn1 ) flanked by Xgwm499-5B and Xest.stsbe968-5B (LOD 6,5, R[2] = 0.27) 10552.

Wangshuibai / Ning 7840: RIL population: Race 1: QTs.ksu-1AS , R[2] =0.39 (nearest marker Xcfa2153-1A and QTs.ksu-2BS , R[2] =0.04) (nearest marker Xbarc2-2B 10753.

TSN1

Tsn1
NoteSensitive to Ptr ToxA.
VarietiesBobwhite 10458; Cheyenne {10458, 0007}; Glenlea 10458; Grandin 10458; Hope {10458, 0007}; Jagger 0007; Katepwa 10458; ND2709 10458; ND495 0007; Sumai 3 10458; Timstein {10458, 0007}.
Varieties (alt.)Kulm Tsc1 10458, 10030, 346; Trenton Tsc1 0315.
dvTwo Ae. speltoides accessions 10756.
Type varietiesLangdon 10458; Some T. dicoccoides accessions 10756.
Marker associationsXbcd183-5B – 1.2 cM – Tsn1/Xbcd1030-5B – 2.4 cM – Xrz575-5B 10688.
cTsn1 has 8 exons and a S/TPK-NBS-LRR structure; all three domains are required for function and TSN1 protein does not interact directly with ToxA 10756. Tsn-ToxA interaction has a major role in SNB development in both common and durum wheat whereas it has a variable role in tanspot development in bread wheat and is not a significant factor for tanspot development in durum wheat 11204..
In Kulm/Erik, toxin response accounted for 24% of the variation in disease response, which was affected by 4-5 genes 10030. Ptr ToxA is functionally identical to S. nodorum ToxA but has two predicted amino acid differences 10459. See Reaction to Phaeosphaeria nodorum . Australian cultivars with tsn1 and Tsn1 are listed in 10540.

TSN2

Tsn2
NoteConditions resistance to race 3 10344
Chromosome3BL
sutvLDN(DIC-3B) 10344.
Type varietiesT. turgidum no. 283, PI 352519 10344; T. dicoccoides Israel-A 10344.
Marker associationsIdentified as a QTL in region Xgwm285-3B – Xwmc366.2-3B (R[2] =91%) 10344; Also classified as a single gene: Xgwm2853B – 2.1 cM – tsn2 – .2 cM – Xwmc366.2-3B 10344.

TSC1

Tsc1
NoteSensitivity to Ptr ToxC 344.
Chromosome1AS
Varieties6B365 0315; Louise 11751; LMPG-6 11751; Opata 85 344.
Varieties (alt.)Kulm Tsn1 0315; Trenton Tsn1 0315.
Marker associationsGli-A1 – 5.7 cM – Tsc1 – 11.7 cM – XksuD14-1A 0315; Mapped to a 2.4 cM region spanning184 kb (CS RefSeq 2.1) in the Penawawa / PI626523 RIL population { 11751}.
According to 10376 the same allele, presumably tsc1 , conferred resistance to chlorosis induced by races 1 and 3 in cultivars Erik, Hadden, Red Chief, Glenlea and 86ISMN2137 in crosses with 6B-365.
tsc1
NoteInsensitivity is recessive. QTsc.ndsu-1A 9924.
VarietiesChinese Spring 11751; Katepwa 315; Opata 85 344; Penawawa 11751; PI 62673 11751; Synthetic W-7984 315.

TSC2

Tsc2
NoteSensitive to Ptr ToxB 10015.
Chromosome2BS
Chromosome bin2BS3-0.84-1.00.
VarietiesAronde 11750; Katepwa 10871; Maris Dove 11750; Synthetic W-7984 10015; Thatcher 11750.
Type varietiesAltar 84 11750.
tsc2
NoteInsensitivity allele 10015
VarietiesChinese Spring 11750; Lynx 11750. Opata 85; Salamouni 10871.
Type varietiesAltar 84 {10871; Langdon 11750.
Marker associationsXmag681-2B/XTC339813 – 2.7 cM – Tsc/XBE444541 – 0.6 cM – XBE517745 10871; An XBE444541 EST-STS co-segregating marker for Tsc2 was developed and lines with tsc2 produced a 505 bp fragment whereas those with Tsc2 produced a 340 bp band 10871. Mapped to a 1.921 Mb region (23.106 – 25.027 Mb) 11750
QTsc.ndsu-1A
NoteResistance is likely recessive 344
SynonymTsc1 344
Chromosome1AS
VarietiesSynthetic W7984 344.
Marker associationsAssociation with Gli-A1 0264, 0040, 344. QTsc.ndsu-1A , or a closely associated gene, confers insensitivity to Ptr ToxC, see 0315. Inoculation with purified toxin Ptr ToxC was used to map this locus. QTsc.ndsu-1A confers resistance in both seedlings and adult plants.
QTsc.ndsu-4A
Chromosome4AL
VarietiesOpata 85/Synthetic W-7984 (ITMI) RI mapping population; resistance was contributed by W-7984 0090; In W-7976/Trenton resistance was contributed by W-7976 0264.
Marker associationsAssociation with Xksu916(Oxo2)-4A and Xksu915(14-3-3a)-4A 0090; In W-7976/Trenton there was association with Xwg622-4A 0264; Minor QTLs in chromosomes 1AL, 7DS, 5AL and 3BL were associated with resistance in adult plants 0264.
QTL 'ITMI population': In addition to tsc2 which accounted for 69% of the phenotypic variation in response to race 5, a QTL in chromosome 4AL ( Xksu916(Oxo)-4AS , W-7948) accounted for 20% of the phenotypic variation 10015. Salamouni / Katepwa: RIL population: variation at the Tsc2 locus explained 54% of the variation in response to race DW5 10871. QTL analyses of durum crosses infected with various isolates of race 4 (lacking in Ptr Tox 1, 2 and 3) detected QTL on chromosomes 1A (2 QTL), 4B (3 QTL) and 5A (1 QTL) 11649.
Tsr1
Synonymtsn1 See: Insensitivity to tanspot toxin
Resistance is recessive. 5BL.

TSR2

Tsr2
NoteResistance is recessive. Confers resistance to race 3 10344.
Synonymtsn2 10344
Chromosome3BL
sutvLDN (DIC-3B) 10344.
Type varietiesT. dicoccoides Israel-A 10344.
tv2T. turgidum no. 283, PI 352519 Tsr5 10344.
Marker associationsIdentified as a QTL in region Xgwm285-3B – Xwmc366.2-3B (R[2] = 91%) 10344; also classified as a single gene: Xgwm285-3B – 2.1 cM – tsr2 – 15.2 cM – Xwmc366.2-3B 10344.

TSR3

Tsr3
Synonymtsn3 10394
Chromosome3D
Chromosome3DS
VarietiesXX41 = [Langdon/ Ae. tauschii CI 00017] 10394; XX45 10394; XX110 10394.
dvAe. tauschii CI 00017 10394.
Marker associationsXgwm2a – tsn3 , 15.3 cM, 14.4 cM and 9.5 cM in CS/XX41, CS/XX45 and CS/XX110, respectively 10419. Resistances in XX41 and XX110 were recessive whereas that in XX45 was dominant - all three were hemizygous-effective 10394. The genes were given different temporary designations {10394, 10419}, but all will be considered to have a common gene until they are shown to be different.

TSR4

Tsr4
NoteResistance is recessive. Resistance to race 1 (culture ASC1a) 10350.
Synonymtsn4 10350
Chromosome3A
VarietiesSalamouni 10350.

TSR5

Tsr5
Synonymtsn 10509
Chromosome3BL
tv2T. turgidum no. 283, PI 352519 Tsr2 10509.
Marker associationsTsr5 – 8.3 cM – Xgwm285-3B – 2.7 cM – Tsr2 10509.

TSR6

Tsr6
NoteResistance is recessive.
Chromosome2BS
VarietiesND-735 10668.
Marker associationsXwmc382-2B – 15.3 cM – wPt-0289 – 4.6 cM – Tsr6 – 18.7 cM – Xwmc-2B 10668. According to 10668 Tsr6 should be identical to tsc2 (see Insensitivity to tan spot toxin (chlorosis)).

TSR7

Tsr7
NoteDominant. QTs.zhl-3B 11362.
Chromosome3BL
VarietiesBr34 11363; Penawawa 11363.
sutvLinked STARP markers were developed 11363.
Marker associationsLinked STARP markers were developed 11363.
Tsr7 conferred resistance to race 1 (isolate Pti2), race 2 (isolate 86-124), race 3 (isolate 331-9), and race 5 (isolate DW5) 11362. Temporary designations
TsrAri
NoteRecessive
Chromosome3A
VarietiesArina 10765; Heines VII 10765; Zenith 10765.
TsrHar
Chromosome3B
VarietiesDashen 10590; HAR 604 10590; HAR 2562 10590. Effective against races ASC1a (race 1) and DW-16 10590.
QTL Louise / Penawawa: RIL population: QTs.zhl-1A , located at interval 0-6.0 cM and likely Tsc1 ; QTs.zhl2D , located at 144.0-152.0 cM; QTs.zhl-3B , located at 72.0-78.0; and QTs.zhl-5A located at 154-160 cM 11362. A QTL analysis of 4 durum crosses identified 12 QTL on chromosomes 1B, 2B (2), 3A (3), 5A (5) and 7A 11481.

3.24. Reaction to Rhizoctonia spp.⌂ Home

Cause of Rhizoctonia root rot.

ROT1

Rot1
VarietiesScarlet-Rz1 10761. Scarlet-Rz1 was produced by mutagenesis 10761.

3.25. Reaction to Sitobion avenae⌂ Home

English grain aphid.

SA1

Sa1
SynonymRA-1 10877
Chromosome6AL
Type varietiesC273 10877.
Marker associationsXwmc179-6A – 3.37 cM – Sa1 – 4.73 cM – Xwmc580-6A 10877.

3.26. Reaction to Sitodiplosis mosellana (Gehin)⌂ Home

Insect pest: Orange blossum wheat midge, Wheat midge. This pest should not be confused with Contarinia tritici , the yellow blossom wheat midge.

SM1

Sm1
Chromosome2B
VarietiesAugusta {218, 11137}; Blueboy 218; Caldwell 218; CDC Landmark 11579; Clark 218; FL302 218; Glencross 11044; Goodeye 11044; Howell 218; Knox 62 218; Mono 218; Paragon 11579; Robigus11137; Seneca 218; Skalmeje 11137. Unity 11579.
Marker associationsLinked to a SCAR marker223; Sm1 was mapped to a 2.5 cM interval on chromosome 2BS flanked proximally by AFLP-derived SCAR marker WM1 and distally by SSR Xgwm2102B { 10291}; A combination of 2BS-5344126kwm707 and 2BS-6229175kwm693 appeared to be predictive of Sm1 but there was variation between sources 11137. KASP marker developed in 11579.
cGene candidate with NB-ARC-LRR-kinase-MSP structure 11579.
QTL Henong 215 (R) / Yanyou (S) and 6218 (S) / Jimai 24 (R): selected RIL populations: Several QTL identified: QSm.hbau-4A.2 with LOD scores 5.58 – 29.22 and PVE 24.4 – 44.8% were mapped to a 4.9 Mb interval; nearest markers AX-109543456, AX-108942696 and AX-110928325 11425. Reeder I/Conan: RIL population: QSm.mst-1A , flanked by Xwmc59-1A and Xbarc1022-1A was the most effective and constant QTL for reduced larval infection over two years (R[2] =0.17 and 0.34) 10841. RILs with this QTL in three genetic backgrounds had reduced infestations of 42% 10841.

3.27. Reaction to Schizaphis graminum Rond. ( Toxoptera graminum Rond.)⌂ Home

Insect pest: Greenbug

GB1

Gb1
NoteRecessive.
Synonymgb1 222
Chromosome1AS
CI 9058 222; Dickinson Selection 28A 222. Located in the region 13.3 – 14.2 Mb 11731.

GB2

Gb2
NoteDerived from Secale cereale . 1A 554 = T
Chromosome1AL
1R#2S 389.

GB3

Gb3
NoteResistance in Largo and derivatives was controlled by multiallelic complementary genes 783. Gb3 was postulated to be one of the loci concerned.
Chromosome7D
Chromosome7DL
Chromosome bin7DL3 0.82-1.00.
VarietiesLargo CI 17895 622; TAM110 0319; TAM112 {194, 10764}; TXGBE373 0319.
alInsave rye.
Type varietiesAe. tauschii PI268210 10907.
Marker associationsCompletely associated with 2AFLP markers 0319. These were also present in germplasm line KS89WGRC4, implying the likely presence of Gb3 or a closely linked resistance gene 0319; Xgwm037-7D – 0.4 cM – Gb3/Xwmc634-7D – 0.8 cM – Xbarc76-7D 10169; H1067J6-R – 0.7 cM – Gb3 – 0.4 cM – H1009B3-F 10907. Gb3Gb8 15+-1.35 cM 11378.

GB4

Gb4
Chromosome7DL
VarietiesCI 17959 903. Gb4 is either closely linked or allelic to Gb3 10267.

GB6

Gb6
NoteDerived from Secale cereale . 1A = T
Chromosome1AL
1R#2S 1151.

GB7

Gb7
Chromosome7DL
VarietiesSynthetic W7984 10169.
Type varietiesAe. tauschii TA1651 10169.
Marker associationsXwg420-7D – 2.1 cM – Gb7 – 13.4 cM – Xwmc671-7D 10169. KASP markers developed {M23026}; KASP markers developed 11633.

GB8

Gb8
SynonymGb595379-1 11378.
Chromosome7DL
Chromosome bin7DL3-0.82-1.00.
VarietiesPI 595379-1 11378.
Marker associationsXbarc11-7D – 10.41 cM – Gb8/Xstars508 (596.4 Mb) 7.4 cM – Xwmc824-7D – 4.8 cM – Xgwm428-7D 11378. Gb3Gb8 15+-1.35 cM 11378.

GB9

Gb9
NoteGb76364 11726.
Chromosome7DL
VarietiesPI 703387, CWI 76364 11726.
dvAe. tauschii Wx1027 (CIMMYT) 11726.
Marker associationsMapped to a 0.6 Mb interval - Stars-KASP872 (599.8 Mb; CS RefSeq 2.1) 0.6 cM – Gb9 – 0.5 cM and Stars-KASP881 (600.5 Mb) 11726. Gb9Gb3 , 14.9 cM 11726. Gb9Gb8 , 16.3 cM 11726.
Temporary designations
Gba
Chromosome7DL
VarietiesTA4152L94 = CETA/ Ae. tauschii Wx1027 10267.
Marker associationsXwmc6717D – 34.3 cM – Gba – 20.7 cM – Xbarc53-7D 10267.
Gbb
Chromosome7DL
VarietiesTA452L24 = CROC 1/ Ae. tauschii Wx224 10267.
Marker associationsXwmc6717D – 5.4 cM – Gbb – 20.2 cM – Xbarc53-7D 10267.
Gbc
Chromosome7DL
VarietiesTA4063.1 = 68111/Rugby//Ward// Ae. tauschii TA2477 10289.
Marker associationsXgwm671-7D – 13.7 cM – Gbc – 17.9 cM – Xgdm150-7D 10267.
Gbd
VarietiesTA4064.1 = Altar 84/ Ae. tauschii TA2841 10267.
Marker associationsXgwm671-7D – 7.9 cM – Gbd – 1.9 cM – Xwmc157-7D 10267.
Gbx1
SynonymGbx 10267
Chromosome7DL
VarietiesKS89WGRC4 = Wichita/TA1695//2*Wichita 10267.
dvAe. Tauschii TA1695 10267.
Marker associationsXwmc157-7D – 2.7 cM – Xgdm150-7D 10267.
Gbx2
SynonymGbx 10267
VarietiesW7984 10267.
Marker associationsGbx2 was located 8.8 cM from Gb3 10267.
Gby
Chromosome7A
VarietiesSando’s Selection 4040 10192.
Marker associationsXpsr119-7A/Xbcd98-7A – 5.8 cM – Gby – 3.8 cM – Xpr1B-7° 10192.
Gbz
Chromosome7DL
VarietiesKSU97-85-3 10171.
Type varietiesAe. tauschii TA1675 10171.
Marker associationsXgdm46-7DL – 9.5 cM – Xwmc157-7D/Gb3/Gbz – 5.1 cM – Xbarc53-7D 10171; Xwmc671-7D – 3.9 cM – Gbz/Xwmc157-7D – 5.1 cM – Xbarc53 10267.
QTL QGb.unlp.6A for antixenosis was associated with Xgwm1009-6A and Xgwm1185-6A in a CS/CS(Synthetic 6A) DH population 10216. Antibiosis was associated with several markers, including Rc3 (7DS) in chromosome 7D 10167.

3.28. Reaction to Soil-Borne Cereal Mosaic Virus⌂ Home

Syn.: Soilborne wheat mosaic. Vectored to the roots by the fungus, Polymyxa graminis

SBM1

Sbm1
SynonymSbmCz1 10132
Chromosome5DL
VarietiesCadenza 10132; Claire 11138; Moulin 11138; Tonic 10614; Tremie 11138.
Varieties (alt.)Cadenza Sbm2 11500.
Marker associationsXbarc110-5D – 14.7 cM – Sbm1 – 2.1 cM – Xwmc765-5D – 3.1 cM – Xbarc144-5D/Xwmc443-5D/RRES01-5D 10614; Caps marker RRESO1 was developed from an AFLP fragment10614; E37M49 – 9.0 cM – Sbm1 – 1.0 cM – Xgwm469-5D – 2.0 cM – Xwmc765-5D . Resistant varieties carried 152 or 154 bp alleles at Xgwm469-5D 11138; all susceptible genotypes had a null allele 11138. Sbm1 was identified in a DH population of Avalon (S)/Cadenza (R) 10132.

SBM2

Sbm2
Chromosome2BS
VarietiesXi19 11500.
Varieties (alt.)Cadenza Sbm1 11500.
Temporary designations
SbmTmr1
Chromosome5D
VarietiesTAM 107-R7 10683.
Sbmwm1
VarietiesHeyne 11435. 5D 11435.
Marker associationsXgwm272-5D – 20.2 cM – Sbwm1 – 2.2 cM – wsnpCAP11c209198467 – 0.7 cM – wsnpJDc44385568170 – 8.7 cM – Xgwm469 11435. Sbm1 and Sbmwm1 are likely the same gene.
SBWMV
Chromosome5D
VarietiesKS96WGRC40 10685.
dvAe. tauschii TA2397 10685.
Marker associationsXcfd010-5DL – 9.5 cM – SBWMV – 11.1 cM – Xbarc144-5D 10685.
QSbv.ksu-5D , (R[2] =0.38) was found in Karl 92*2/TA4152-4 10273; the resistance was contributed by Karl 92.

3.29. Reaction to Tapesia yallundae . (Anomorph: Pseudocerosporella herpotrichoides (Fron) Deighton)⌂ Home

Disease: eyespot, strawbreaker footrot.

PCH1

Pch1
SynonymPch 261
7DL 708, 1603. 7D {591, 592}.

PCH2

Pch2
Chromosome7A
7AL 228, 229.

PCH3

Pch3
adCS + 4V 1050.
Temporary designation Pch Dv 618. 4VL 618.
QPch.jic-5A
Chromosome bin5AL-6 0.68-0.78.
Marker associationsClosely associated with Xgwm639-5AL 10771.

3.30. Reaction to Tilletia caries (D.C.)Tul., T. foetida (Wallr.) Liro, T.⌂ Home

controversa Disease: Bunt, dwarf smut, stinking smut.

BT1

Bt1
SynonymM1 135
Chromosome2B
Sources / synonymsCS[*] 7/White Federation 38 1304.
VarietiesAlbit 129; Banner Berkeley 129; Federation 41 137; Regal 129; Sherman 137; White Federation 38 1166; White Odessa 137.
Varieties (alt.)Columbia Bt6 1005; Hussar Bt2 135; Hyslop Bt4 733; Martin Bt7 135; McDermid Bt4 734; Odessa Bt7 137; Tyee Bt4 22.

BT2

Bt2
SynonymH 129
VarietiesCanus 137; Seln 1102 11693; Seln 2092 11693; Selection PS60-1-1075 551; Selection 1403 137.
Varieties (alt.)Hussar Bt1 135.

BT3

Bt3
VarietiesFlorence 202, 203; Ridit 1395, 1000, 152.

BT4

Bt4
SynonymT 136
Chromosome1B
VarietiesBison 1285; CI15588 11693; Kaw 1285; Nebred 1285; Omaha 1285; Oveson 1235; Tres {heterogeneous} 23; Turkey 1558 137; Turkey 2578 137.
Varieties (alt.)Hyslop Bt1 733; McDermid Bt1 734; Oro Bt7 137; Turkey 3055 Bt7 137; Tyee Bt1 22. Since Bt4 and Bt6 are very similar, as well as closely linked, only Turkey 3055 should be used as a definite source of Bt4 , and Rio should be used as the source of Bt6

BT5

Bt5
Chromosome1B
VarietiesHohenheimer397; Selection R60-3432 551.

BT6

Bt6
SynonymR 1418
Chromosome1B
VarietiesRio 1418; Turkey 10095 & 10097 53.
Varieties (alt.)Columbia Bt1 1005. Since Bt4 and Bt6 are very similar, as well as closely linked, only Turkey 3055 should be used as a definite source of Bt4 , and Rio should be used as the source of Bt6 . [T136].

BT7

Bt7
SynonymM2 1275
Chromosome2D
Sources / synonymsCS[*] 7/Cheyenne 2D 1000.
VarietiesBaart 1275; Cheyenne 1000; Federation 1275; Gallipoli 1000; Onas 1275; Ranee 1000; Selection 1833 556; Seln500-77 11693.
Varieties (alt.)CI 7090 Bt9 1000; Martin Bt1 137; Odessa Bt1 137; Oro Bt4 1000; Turkey 3055 Bt4 1000.

BT8

Bt8
VarietiesHY476 10181; M822161 11693; PI 178210 1558; Yayla 305 1558.

BT9

Bt9
Chromosome6DL
VarietiesPI 166910 1006; PI 166921 1006; PI 167822 1006; PI 554099 11299; Selection M69-2073 551; M90387 11693.
Varieties (alt.)CI 7090 Bt7 1000; Jeff Bt10 1436; PI 178383 Bt10 1006; Ranger Bt10 1438.
Not clearly differentiated from Bt11 11693.

BT10

Bt10
SynonymQCbt.spa-6D {M11298}
Chromosome6DS
iBW553 = Neepawa*6//Red Bobs/PI 178383 10475.
VarietiesAC2000 10181; AC Cadillac 10181; AC Carma 10181; AC Crystal 10181; AC Foremost 10181; AC Taber 10181; AC Vista 10181; Fairview 1183; M822102 11693; PI 116301 1004; PI 116306 1004; PI 554118 11299; Selection M69-2094 551.
Varieties (alt.)Jeff Bt9 1436; PI 178383 Bt9 1000; Ranger Bt9 1438; Others {128, 239}.
Marker associationsBt10 was completely linked with a 590 bp fragment produced by UBC primer 196 239; RAPD – 1.5 cM – Bt10 763;
Bt10/FSDRSA – 19.3 cM – Xgwm469-6D – 1.8 cM – Xwmc749-6D . The RAPD fragment was sequenced and converted to a diagnostic PCR marker for Bt10 in 0128. Present in lines with SrCad_ 10733.

BT11

Bt11
NoteQBt.ifa-6DL 11693. 3B 11297;
Chromosome6DL
VarietiesM822123 = PI 554119 {10997, 11693}; Elgin/PI 166910 {10997, 11693}.
Marker associationsMay be associated with Xbarc180 , Xwmc623 , Xwmc808 and Xgwm285 11297; Located between 492.6 and 495.2 Mbp, CS RefSeq 2.1 11693. Not clearly differentiated from Bt9 11693.

BT12

Bt12
SynonymQBt.ifa-7DS 11469
Chromosome7DS
VarietiesPI 119333 10997.
Marker associationsAssociated with 13 markers in a distally located physical region of ~4.3 Mbp 11469. Validated KASP markers were derived from IWB61302 and IWB50978 11469. Although appearing to be proximal to QDB.ui- 7DS
11182 the genes were not clearly distinguished.

BT13

Bt13
VarietiesThule III 10997; PI 181463 10997.

BT14

Bt14
Type varietiesDoubbi CI 13711 10997.

BT15

Bt15
Type varietiesCarleton CI 12064 10997.
Temporary desisgnation
Btp
VarietiesPI 173437 10997.
QTL Blizard (R) / 8405-JC3C (S): DH population. Resistance and markers Xgwm374-1BS, Xgwm364-1BS and Xbarc128-1BS were within a 3.9 cM interval 10783. Carberry / AC Cadillac: AC Cadillac contributed QTL QCbt.spa-6D ( Bt10 ) on chromosome 6D (markers XwPt-1695 , XwPt-672044 , and XwPt-5114 ). Carberry contributed QCbt.spa-1B ( XwPt743523 ), QCbt.spa-4B ( XwPt 744434Xwmc617 ), QCbt.spa-4D ( XwPt-9747 ), QCbt.spa-5B ( XtPt-3719 ), and QCbt.spa-7D ( Xwmc273-7D ) 11298. Idaho 444 (R) / Rio Blanco S: RIL population: Three QTL for dwarf bunt resistance: QDB.ui-7DS (R[2] = 0.3-0.6), QDB.ui-1A (R[2] = 0.11-0.15) and QDB.ui-2B (R[2] = 0.06). Two PCR-based markers were developed for the wPt-2565 sequence on chromosome 7DS 11182. IDO835 (R) / Moreland (S): DH population: Q.DB.ui-6DL (PVE 0.53, Bt9 region) and Q.DB.ui-7AL (PVE 0.38) 11400. Trintella / Piko: DH population: One major gene in the chromosome 1BS centromere region, nearest marker Xgwm273-1B 11003. Smaller QTL effects were detected on chromosomes 7A, 7B and 5B in different years. Additional QTL are listed in 18099.

KB1

Kb1
VarietiesChris 394.
Varieties (alt.)CMH77.308 Kb2 394.

KB2

Kb2
VarietiesPF7 113 394. v CMH77. 308 Kb1 394; Shanghai #8 Kb4 394.

KB3

Kb3
VarietiesAmsel 394.

KB4

Kb4
VarietiesShanghai #8 Kb2 394.

KB5

Kb5
NoteRecessive 394
Varieties (alt.)Pigeon Kb6 394.

KB6

Kb6
NoteRecessive 394
Varieties (alt.)Pigeon Kb5 394.
QTL NEED TO SPECIFY GERMPLASM BELOW
Qkb.cnl-3B
Marker associationsLocated in the interval XATPase-3BXcdo1164-3B .
Qkb.cnl-5A.1
Marker associationsLocated in the interval Xmwg2112-5AXcdo20-5A .
Qkb.cnl-5A.2
Marker associationsLocated in the interval Xabg391-5AXfba351-5A .
Qkb.ksu-4BL.1
WL711/HD29 (R): RILs: R[2] = 0.25, associated with Xgwm538-4B 10498. WH542/W485 (R) RILs: R[2] = 0.15, Xgwm6-4BLXwmc349-4BL interval 10499.
Qkb.ksu-5BL.1
WH542/HD29 (R): RILs: R[2] = 0.19, Xgdm116-5BLXwmc235-5BL 10499.
Qkb.ksu-6BS.1
WH542/HD29 (R): RILs: R[2] = 0.13, Xwmc105-6BSXgwm88-6BS 10499.

3.32. Reaction to Ustilago tritici (Pers.) Rostrup⌂ Home

Disease: Loose smut.

UT1

Ut1
VarietiesFlorence/Aurore 1073; Renfrew 1073; Red Bobs 1074.

UT2

Ut2
VarietiesKota 1073; Little Club 1073.

UT3

Ut3
VarietiesCarma 1074.

UT4

Ut4
SynonymQUt.spa-7B 11168
Chromosome7B
Varieties9340-CP 11168; Glenlea 11168; TD1 11168; Thatcher/Regent 1074.

UT5

Ut5
SynonymUt-Fore 10940, Ut-X 11164
Chromosome5BL
VarietiesForemost 10940.
Marker associationsXgpw5029 – 2.8 cM – Ut5 – 1.3 cM – Xbarc232-5b 10940. See Ut-x . Race T10 was used for analysis 10940.

UT6

Ut6
SynonymQUt.spa-5B 11168
Chromosome5BL
VarietiesAC Foremost 11169; AC Karma 10040; AC Vista 11168; Chinese Spring 11169; Glenlea 11169; HY320 11169; Oasis 11169.
Marker associationsXgpw5029-5B – 2.8 cM – Ut6 – 2.8 cM – Xbarc232-5B 11169.

UT7

Ut7
SynonymQUt.spa.7A 11168
Chromosome7A
VarietiesSC8021V2 11168.

UT8

Ut8
SynonymQUt.spa-3A 11168
Chromosome3A
Varieties9340-SP 11168; Glenlea 11168.

UT9

Ut9
SynonymQUt.spa-6B 11168
Chromosome6B
VarietiesSC8021V2 11168.

UT10

Ut10
SynonymQUt.sps-6D 11168
Chromosome6D
VarietiesSC80-21V2 11168.

UT11

Ut11
Chromosome7BS
VarietiesDH line TD14XDIA*B0075, CN 120264 11406; Sonop, TD-14 11406.
Marker associationsCo-segregation with BS0002256251, ExcabiburC3489182 and Kukrirepc71778644 at 0.43, 1.20 and 1.25 Mbp 11406. Ut11 conferred resistance to race T2 but not T9 and T39; resistance to those races (and race T2) was conferred by QUt.mrc-5B 11406.
Temporary designations
UtBW278
Chromosome5BS
VarietiesBW728 11729.
Marker associationsMapped to a region close to Utd1 11729. Identified in a BW278 / AC Foremost cross with a Ustiago teitici isolate virelent to AC Foremost 11729.
Utd1
Chromosome5BS
Type varietiesD93213 10684; P9163-BJ08*B 10684; VIR 51658 10684.
Marker associationsSCAR – 3.2 cM – Utd1 – 5.9 cM – Xgwm234-5B 10684.
Ut-x
VarietiesBiggar BSR 11164.
Marker associationsXcrc4-2B – 14 cM – Ut-x – 10 cM – Xabc153-2B.2 11164; Xcrc4-2B.2 (Syn. Xcrc4.2 ) is a SCAR.
Resistance to race 19 was associated with chromosome 6A of Cadet, Kota, Thatcher and TD18 0208. In the case of Cadet, resistance was localized to 6AS 0208.

3.33. Reaction to Wheat Spindle Streak Mosaic Bymovirus (WSSMV)⌂ Home

WSSMV is soil-borne and vectored by the fungus Polymxa graminis . This virus has some sequence similarity to Wheat Yellow Mosaic virus 10285. Wheat streak mosaic disease can also be caused by Triticum mosaic virus, which is also known as High Plains Wheat mosaic virus. Low rates of seed borne transmission of WSSMV are reported.

WSS1

Wss1
NoteDerived from Haynaldia villosa . T
Chromosome4VS
Chromosome4DL
4D(4DL.4VS) 10271. QTL Geneva (R) / Augusta (S): 79% of the variation between these accessions was associated with markers Xbcd1095-2D and Xcdo373-2D located 12.4 cM apart in chromosome 2DL 0131.

3.34. Reaction to Mosaic Virus⌂ Home

Vectored by wheat curl mites, Eriophyes tulipae and E. tosichella . See: Resistance to colonization by Eriophyes tulipae . According to 10226 WSMV may also be see-borne. At least some sources of resistance to WSMV are also effective against Triticum mosaic virus.

WSM2

Wsm2
Chromosome3BS
VarietiesClara CL PI 1665948 11329; CO960293-2 10802; Oakley CL PI 670190 11329; RonL 10898; Snowmass 10802.
Marker associationsWsm2 – 5.2 cM – XSTS3B55 10802; Xbarc102-3B – 1.6 cM – Wsm2 10802; Xgwm389-3B – 30.8 cM – Wsm2 – 45.2 cM – Xgwm566-3B 10898; Xbarc87-3B – 4.4 cM – Wsm2 – 3.9 cM – Xbarc102-3B 10982; Eight SNP markers were mapped within 1 cM of Wsm2 11329. KASP markers were developed from some of these SNP 11330; Mapped to a 4.0 Mb region in distal arm 3BS carrying 142 candidate genes, six of which were differentially expressed in Snowmass relative to susceptible Antero 11654.
Wsm2 confers resistance at temperatures below 19C 10802. Allele Xbarc102-3B 219 was the best predictor for Wsm2 10982.

WSM3

Wsm3
Chromosome7B
7B (7BS.7S#3L) 10775. TBS.7S#3L 10775.

3.35. Reaction to Xanthomonas campestris pv. undulosa⌂ Home

Disease: Bacterial leaf streak

BLS1

Bls1
Varieties (alt.)Pavon Bls2 244; Mochis T88 Bls3 Bls4 244; Angostura F88 Bls5 244.
Bls2
Varieties (alt.)Pavon Bls1 244.
Bls3
Varieties (alt.)Mochis T88 Bls1 Bls 4 { 244}.
Bls4
Varieties (alt.)Mochis T88 Bls1 Bls3 244.
Bls5
Varieties (alt.)Turnco F88 244; Angostura F88 Bls1 244.
bls1 bls2 bls3 bls4 bls5 : Alondra 244.

3.36. Resistance to Colonization by Eriophyes tulipae ( Aceria tulipae )Mite pest: Wheat⌂ Home

curl mite.

Eriophyes tulipae is the vector of wheat streak mosaic virus (WSMV) and the wheat spot mosaic agent (WSpM).

CMC1

Cmc1
Chromosome6DS
iNorsa*5/Cmc1 10166.
VarietiesAe. squarrosa CI4/Novamichurinka (= AC PGR 16635) 1467; Norstar derivative 222.

CMC2

Cmc2
NoteDerived from Th. elongatum . 6A = T
Chromosome6AS
6Ae#2S 389. 5B = T5BL.6Ae#2S 389. 6D 1575 = T6DL.6Ae#2S 389, 1575.

CMC3

Cmc3
NoteDerived from Secale cereale. 1A =
Chromosome1AL
Chromosome1RS
iNorstar*5/Cmc3 10166. Need to confirm relationship of 1RS segment in Amigo and Salmon as this NIL was derived from KS80H4200 a Chinese Spring Salmon line 10166.
VarietiesAmigo; TAM107 222.
Varieties (alt.)KS96GRC40 Cmc4 222.
Marker associationsWheat lines with the 1RS segment and hence Cmc3 can be selected with the rye-specific SSR Xscm09-1R 222;

CMC4

Cmc4
Chromosome6DS
Varieties (alt.)KS96WRC40 Cmc3 222.
VarietiesTAM112 11612; TAM115 11612; TAM204 11612.
dvAe. tauschii accession 222; Ae. tauschii TA1618 (11612}.
Marker associationsXksuG8-6D – 6.4 cM – Cmc4 – 4.1 cM – Xgdm141-6D 222.

3.37. Reaction to Wheat Yellow Mosaic Virus⌂ Home

WYMV is soil-borne and vectored by the fungus Polymixa graminis . This virus has some sequence similarity to Wheat Spindle Streak Mosaic 10258, another bymovirus.

Temporary designations

YmIb
Chromosome2DL
VarietiesIbis 10750; Jagger 10750; KS 831957 10750; Madsen 10750; Yumechikara 10750.
Marker associationsXwmc181-2D – 12.4 cM – YmIb – 2.0 cM – Xcfd16-2D – 2.0 cM – Xwmc41-2D – 3.1 cM – Xcfd168-2D 10750.
The relationship of YmIb to a previously mapped gene in 2DL for resistance to WYMV and WSSMV in Yangfu 9311 10258 and a Geneva derivative 0131 was not established.
YmYF
Chromosome2DL
VarietiesYangfu 931 10258.
Marker associationsXpsp3039-2D/Xwmc181-2D – 0.7 cM – Xwmc41-3D – 8.1 cM – Xgwm349-2D 10258.
QYm.nau-2D
NoteQ.Ymym 11660.
Chromosome2DL
Chromosome bin2DL9-0.76-1.00.
VarietiesFielder 11645; Yining Xiaomai 11186.
Marker associationsXwmc41-2D – 3.7 cM – 2SNP86.2 – 0.4 cM – QYm.nau-2D – 1.0 cM – 2EST784 11186.
According to 11645 QYm.nau-2D is a natural alien translocation from an Aegilops species and several subsequent wheat haplotypes arose from rare recombination events. This QTL is present in a wide range of cultivars from Europe, USA, Japan, and China 11645.

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