2.1. Grain protein content⌂ Home
Thirteen QTLs for grain protein content were identified in a RI population from the cross WL711 (low protein content)/PH132 (high grain content) 10055. The QTLs that were identified using more than one method or in more than one environment are listed below. Also listed is a QTL that was identified in the mean over the four environments and was therefore deemed important 10055. QTLs for grain protein content were detected on chromosome arms 6AS (associated AFLP marker, XE38M90v200v ) and 1BL (associated RFLP marker, Xcdo1188 ) in Courtot/Chinese Spring’ 0141.
| Chromosome | 6B |
| Type varieties | Langdon 623. |
GPC-B1
This allele, fixed in cultivated durum, is a non-functional frame-shift mutation
10438. A similar nonfunctional allele, or a complete deletion of
GPC-B1 , is fixed in hexaploid wheat
10438.
| Synonym | QGpc.ndsu-6Bb 10071, 623, Gpc-6B1 10299, NAM-B1 10995 |
| Chromosome | 6BS |
| i | Yecora Rojo NIL PI 638740 10138. |
| Varieties | As II 10995; Burnside 11044; Diamant 10995; Glencross 11044; Glupro 10138; Lilian 11044; Prins 10995; Somerset 11044; Stanley 10995; T. spelta Altgold 10995. |
| Type varieties | T. dicoccoides FA-15 10138. |
| Marker associations | Mapped to a 0.3 cM interval flanked by Xucw79-6B and Xucw71-6B 10229; Xcdo365-6B – 1.5 cM – Gpc-B1 – 1.2 cM – Xucw67-6B {10296. A high-throughput codominant marker, Xuhw89-6B , was then mapped less than 0.1 cM from Gpc-B1 10297. |
Gpc-B1b , the functional allele
10438 in
T. dicoccoides , affects senescence and maturity in addition to grain protein content, accelerating senescence and maturity
10298.
Gpc-B1 is a NAC transcription factor designated
Nam-B1 10438. A paralogous copy of this gene is present in homologous group 2 (
Nam2 ).
This allele was relatively frequent in Scandinavian and Finnish common wheats, landraces and spelts
10995.
| Chromosome | 5DL |
| Sources / synonyms | CS[*] 6/Hope 5D 777. May be identical to VRN-D1 . |
| Chromosome | 5DS |
| Sources / synonyms | CS[*] 6/Hope 5D 777. |
| Chromosome | 2BL |
| Varieties | WL711/PH132 RI mapping population 10055; higher protein content was contributed by PH132 and the QTL explained 13.4% of the phenotypic variation 10055. |
| Marker associations | Associated with Xgwm1249-2B 10055. |
| Chromosome | 2DL |
| Varieties | WL711/PH132 RI mapping population {10055, 0015}; higher protein was contributed by PH132 and the QTL explained 19% 0015 and 14% 10055 of the phenotypic variation. |
| Marker associations | Associated with Xgwm1264-2D 10055. |
| Chromosome | 3DS |
| Varieties | WL711/PH132 RI mapping population 10055; higher protein content was contributed by PH132 and the QTL explained 16.3% of the phenotypic variation 10055. |
| Marker associations | Associated with Xgwm456-3D 10055. |
| Chromosome | 3DS |
| Varieties | WL711/PH132 RI mapping population 10055; higher protein content was contributed by PH132 and the QTL explained 14% of the phenotypic variation 10055. |
| Marker associations | Associated with Xgwm892-3D 10055. |
| Chromosome | 7AS |
| Varieties | WL711/PH132 RI mapping population 10055; higher protein content was contributed by PH132 and the QTL explained 32.4% of the phenotypic variation 10055. |
| Marker associations | Associated with Xgwm1171-7A 10055. |
| Varieties | F26-70 10628; Closely associated with Ppd-B2 10628. |
| su | Favorit (F26-70 7B) 10628. See Response to Photoperiod. |
| Chromosome | 5B |
| Varieties | LDN (DIC5B)/LDN, contributed by DIC5B 10161. |
| Marker associations | Nearest marker, Xgwm604-5B 10161. |
| Chromosome | 5B |
| Varieties | LDN (DIC5B)/LDN, contributed by DIC5B 10161. |
| Marker associations | Nearest marker, Xabc310-5B 10161. |
| Chromosome | 5B |
| Varieties | LDN (DIC5B)/LDN, contributed by DIC5B 10161. |
| Marker associations | Nearest marker, Xwg909-5B 10161. |
| Chromosome | 6BS |
| Type varieties | Langdon 623. |
| Chromosome | 2A |
| Varieties | Renan/Recital 10071. |
| Marker associations | XksuD18-2A – Xgwm614-2A (R[2 ] = 4.4-8.9%) 10071. |
| Chromosome | 3A |
| Varieties | Renan/Recital 10071. |
| Marker associations | Xcfd79-3A – Xfbb250-3A (R[2 ] = 4.1-8.3%) 10071. |
| Chromosome | 4D |
| Varieties | Renan/Recital 10071. |
| Marker associations | Linked to Xcfd71-4D (R[2 ] = 4.610.3%) 10071. |
| Chromosome | 7D |
| Varieties | Renan/Recital 10071. |
| Marker associations | Xcfd69-7D – Pch1 (R[2] =6.410.4%) 10071. |
Associated with
Gai1 and
Xpsr622-4B 110[2] .
Associated with
Xpsr911-5A 110[2] and
Xcdo412-5A 0343[*]
Associated with
Xpsr167-6A and
XksuG8-6A 110[2] .
Associated with
Xmgb56-6A 110[2] and
Xpsr627-6A 0343[*] .
| Note | Associated with Gli-B2-6B 110[2] and Nor-2 0343[*] . |
| Marker associations | QGpc.ndsu-6B was associated (LOD score =18.9) with the interval Xmwg79-6B – Xabg387-6B . These loci were mapped in 6BS: Xmwg79-6B – 5.9 cM – Xabg387-6B – 9.0 cM – centromere 623. |
Associated at P<=0.01 with
Pan2 0343[*] .
Associated with
Xpsr490(Ss1)-7B ,
Pc 110[2] and
Xutv913-7B 0343[*] . QTLs for grain protein content were detected on chromosome arms 6AS (associated AFLP marker,
XE38M60 200) and 1BL (associated RFLP marker,
Xcdo1188-1B ) in Courtot/Chinese Spring
0141.
Forno / Oberkulmer spelt: Nine QTLs (51% of the variation) were mapped in cross
0280.
Cheyenne (high quality wheat) / CS (low quality wheat): RSL population: A QTL for grain and flour protein content, contributed by CS, was associated with
XTri-1D /Centromere
0251.
Renan / Recital: Four QTL conferring grain protein content
10071; only QTL stable over at least 4 of 6 locations were presented. Renan contributed the four alleles for high grain protein content.
Ning 7840 / Clark: RIL population: QTL from Ning 7840 were detected on chromosomes 3AS (
Xwmc749-3AS –
Xgwm369-3AS ; R[2 ] = 0.09-0.11) and 4B (
Xgwm368-4B –
Xwmc617-4B , R[2 ] = 0.08-0.11)
10702.
## Tetraploid wheat
T. dicoccoides / Latino: In line 3BIL-85 high grain protein was detected in chromosomes 2AS (associated with
Xcfa2164-2A , R[2 ] = 17%), 6AS (
Xp39M37 250-6A, R[2 ] = 17%) and 7BL (
Xgwm577-7B , R[2 ] = 9%)
10338.
ACPH-1
| Synonym | Acph-B1 936, Acph3 516, Acph2 516 |
| Chromosome | 4AS |
| Varieties | CS. |
| Chromosome | 4H |
| ad | CS/Betzes. Acph-M[v] 1 237. [ Acph-M[v] 1 985, Aph-v 237]. 4M[v ] 237. |
| tr | H-93-33 984. |
| Chromosome | 7R |
| Chromosome | 7RS |
| ad | CS/Imperial. Acph-S[s] 1 1140. 4S[s ] 1140. |
| ad | CS/ T. searsii . |
ACPH-2
| Synonym | Acph1 10309 |
| Chromosome | 2DL |
| dv | Acph-D2 100 and Acph-D2 95 alleles distinguished accessions of Ae. tauschii ssp. tauschii and strangulata , respectively 1030. |
| Type varieties | Ae. tauschii 10407. |
| Marker associations | Cent ... Acph-D2 – 4 cM – Xgwm157- 2D 10309. |
Acid phosphatase gene loci were reported for 7RL in
S. cereale 1251, chromosomes L1 (= 7Ag[i] ) and L4 (= 4Ag[i] ) of
Thin. intermedium 361, and chromosome E of
Ae. umbellulata 0069. Two loci on 7R were separated by 25 +or- 5.2 cM
1534. Wehling
1559 identified four acid phosphatase loci in
S. cereale , three of which were in 7R.
| Synonym | Adh-B1 504, AdhB 502 |
| Chromosome | 4A |
| Synonym | Adh11 501, Adh-A1a 1442 |
| Varieties | CS. |
| Type varieties | PI 226951 501; Malavika 1442. |
| Synonym | Adh12 501, Adh-A1b 1442 |
| Varieties | Rageni derivative 1443. |
| Type varieties | CI 4013 501; Bijaga Yellow 1442. Adh-B1b was the only variant ADH-1 allele detected in study of a large number of T. aestivum and T. turgidum accessions 503. |
| Synonym | AdhD 502 |
| Chromosome | 4D |
| Chromosome | 4DS |
| Varieties | CS. |
| Marker associations | Adh-D1 [ Adh1, Adh2 ] was mapped 4 cM distal to Xpsr163-4D and closely proximal to Xcsiha114-4D.1 . [ XcsIHA114-1a '] 757. |
| Synonym | G 1278 |
| ad | T. aestivum cv. Alcedo/ Ae. caudata line G. ADH-Ag[i] 1 560, 374. [ Adh-X1 361]. 4Ag[i] 560. |
| ad | Vilmorin 27/ Th. intermedium ; Caribo/ Th. intermedium . |
| Chromosome | 4ES |
| ad | CS/ E. elongata . |
| Chromosome | 4H |
| ad | CS/Betzes. ADH-M[v] 1 984. [ ADHmu 984, Adh-M[v] 1 985]. 4M[v ] 984. |
| Varieties | H-93-33. |
| Synonym | AdhR2 582 |
| Chromosome | 4R |
| Chromosome | 4RS |
| ad | CS/Imperial {1457, 506}; FEC28/Petkus 43; Holdfast/King II 582. ADH-V1 1026, 242. 4V 1026. |
| ad | CS/ D. villosum . |
Three
Adh genes were identified in
Hordeum vulgare and
H. spontaneum 144,
490,
493,
520. Two of these were tightly linked at the
Adh-H1 locus
144. The third gene was tentatively located in 5H
490. A low-level of aliphatic alcohol dehydrogenase activity is commonly observed on zymograms in the absence of added substrate
513; this may account for the observation of wheat lactate dehydrogenase that was reported in
1465.
The gene series formerly designated
Adh-2 and
Adh-3 appear under Aromatic Alcohol Dehydrogenase
| Note | 6AS 504, 516. |
| Varieties | CS. |
| Note | 6BS 504, 516. |
| Varieties | CS. |
| Varieties | Iskra 1533. Amp-B1c 703, 1244. Null allele. |
| Varieties | T. spelta IPSR 1220017 703; Sinvalocho M.A 1244. |
| Note | 6DS 504, 516. |
| Varieties | CS. |
| Varieties | Sears' Synthetic IPSR1190903. |
AMP-Ag[e] 1
1575. 6Ag[e]
1575.
ad,su: Rescue/
Th. elongatum .
AMP-Ag[i] 1
703. 6Ag[i]
703.
| Chromosome | 6D |
| ad | Alcedo/ Ae. caudata line D. |
| Chromosome | 6E |
| ad | CS/ E. elongata . |
| Chromosome | 6H |
| ad | CS/Betzes. |
| Chromosome | 6R |
| ad | CS/Imperial 1457; Holdfast/King II 1280. |
| Synonym | a-Amy-B4 |
| Type varieties | T. durum ssp. georgicum . The presence of a-Amy1 reported in 1084 was confirmed by tests of segregation in a CS/Jones Fife population and in a population derived from a tetraploid cross 1083. Recombinations with a-AmyB1 were 9.3% and 22.3%, respectively. |
A further set of a-amylase genes,
Xa-Amy-5 [
a-Amy3 ], was identified in 5A, 5B and 5D by crosshybridization with
a-AMY-1 and
a-AMY-2 probes
80. Only one gene copy appears to be present at each locus. In rye, evidence was obtained for three
a-Amy-1 genes, two or three
a-Amy-2 genes and three
aAmy-3 genes
907.
Synthesis of a-amylase isozymes controlled by
a-Amy-1 genes on chromosomes 6A and 6D is reduced in DT6BS compared to euploid CS. This result suggests the presence of a gene(s) on the long arm of chromosome 6B, which is (are) required for GA-induced alpha-amylase synthesis in the aleurone
0072.
| Chromosome | 7DL |
| Varieties | CS. |
| Synonym | EP-V1 973 |
| Varieties | 5L 219 1521; H-93-70 1521; Hyak 21; Madsen 20; Rendezvous 708; VPM1 973. Assuming that Ep-D1 encoded an oligopeptidase G, comparative genetics were applied to develop a STS marker for identifying resistance gene Pch1 10513 (see Reaction to Tapesia yallundae . |
| Varieties | Sears' Synthetic. |
| Note | Null allele. |
| Varieties | Wheats with Lr19 1587. |
| Note | Isozyme 5. |
| Varieties | PI 294994 894. |
| Chromosome | 7EL |
| al | CS/ E. elongata . |
| Chromosome | 7HL |
| al | CS/Betzes. |
| Chromosome | 7H |
| su | CS/ H. chilense . |
| Note | 7H[t] S 1037. |
| ad | CS/ E. trachycaulus . |
| Synonym | Ep-M[v] 1 985 |
| Chromosome | 7M |
| Chromosome | 7S |
| su | Holdfast/ Ae. bicornis . |
| Chromosome | 4S |
| ad | CS/ Ae. longissima . |
| Chromosome | 7S |
| ad | CS/ T. searsii . |
| Chromosome | 7U |
| su | CS/ Ae. umbellulata . |
| Chromosome | 7V |
| ad | CS/ D. villosum . |
| Chromosome | 1ES |
| ad | CS/ E. elongata . |
| Chromosome | 1HS |
| ad | CS/Betzes. |
| Chromosome | 1H |
| ad | CS/ H. chilense . |
| Chromosome | 1R |
| Chromosome | 1RS |
| ad | CS/King II 195. |
| al | 2a, 2b, and R14 779. |
| Chromosome | 1R |
| ad | CS/ S. montanum . |
| Note | 1S[1] S 1228.1S[1] 517. |
| Marker associations | In Ae. longissima 2 x Ae. longissima 10, GPI-S[l] 1 , two glutenin loci, and three gliadin loci were mapped relative to one another as follows: GLU-S[l] 1 – 15.9 cM – GPI-S[l] 1 – 38 cM – GLI-S[l] 4 – 7.1 cM – GLU-S[l] 3 – 0.9 cM – GLU-S[l] 1 – 5.6 cM – GLI-S[l] 5 1228; GLU-S[l] 1 is located in 1S[l] L and the other loci are in 1S[l] S. |
| Chromosome | 1S |
| ad | CS/ Ae. searsii . |
| Chromosome | 1U |
| ad | CS/ Ae. umbellulata . |
| Chromosome | 1V |
| ad | CS/ D. villosum . |
| Chromosome | 6AL |
| Varieties | CS. |
| Chromosome | 6BL |
| Varieties | CS. |
| Chromosome | 6DL |
| Varieties | CS. |
| Marker associations | Cent – Got-D2 – 2 cM – Xpsr154-6D 757. |
6Ag[e ]
1575.
ad,su: Rescue/
Th. elongatum .
| Note | 6EBeta 518. |
| ad | CS/ E. elongata . |
| Chromosome | 6H |
| ad | CS/Betzes. |
| Chromosome | 6H |
| ad | CS/ E. trachycaulus . |
| Chromosome | 3AL |
| Varieties | CS. |
| Chromosome | 3BL |
| Varieties | CS. |
| Chromosome | 3DL |
| Varieties | CS. |
| Note | 3Ag[e] L 521. |
| ad | CS/TAP 67. |
| su | CS/TAP 67. |
| tr | Certain CS 3D/Ag lines. |
| Note | F 1278. |
| ad | T. aestivum cv. Alcedo / Ae. caudata line C. |
| Chromosome | 3EL |
| ad | CS/ E. elongata . |
| Synonym | Got-b3 90 |
| Chromosome | 3H |
| ad | CS/Betzes. |
| Chromosome | 3H |
| ad | MA/ H. chilense . |
| Synonym | Got3 1559 |
| Chromosome | 3R |
| ad | CS/Imperial 1457; Holdfast/ King II 1253; Kharkov/Dakold 1253. |
| Chromosome | 3S |
| ad | CS/ Ae. searsii . GOT-V3 1518, 242. 3VL 1518. |
| ad | Creso/ D. villosum . GOT-4 |
| Synonym | Got1/7R 1203, Got2 1559 |
| Chromosome | 7RL |
| al | S. cereale . |
| Synonym | Mdh2B 87 |
| Chromosome | 1BL |
| Synonym | Mdh2D 87 |
| Chromosome | 1DL |
| Varieties | CS. |
| Chromosome | 1HL |
| ad | CS/Betzes. |
| Chromosome | 1H |
| ad | MA/ H. chilense . |
| Synonym | Mdh2-1 1252 |
| Chromosome | 1RL |
| ad | CS/Imperial 1R; Kharkov/Dakold 1R; Holdfast/King II 1RL. |
| Chromosome | 1S |
| ad | CS/ T. searsii . |
MDH-2
| Synonym | Mdh2-b2 90 |
| Chromosome | 3H |
| Synonym | Mdh2-2 1252 |
| Chromosome | 3R |
| ad | CS/Imperial. |
A third set of dimeric MDH isozymes identified in mature grain was separable from MDH-1 and MDH-2 by their higher pI's in IEF
811.
| Chromosome | 5AS |
| Varieties | CS. |
| Varieties | Sears' Synthetic. |
| Chromosome | 5BS |
| Varieties | CS. |
| Chromosome | 5DS |
| Varieties | CS. |
| Chromosome | 5ES |
| ad | CS/ E. elongata . |
| Chromosome | 5H |
| ad | CS/Betzes. |
| Chromosome | 5U |
| ad | CS/ Ae. umbellulata . |
| Chromosome | 1RL |
| Varieties | Various crosses. |
| Chromosome | 1BS |
| Varieties | CS. |
| Chromosome | 1DS |
| Varieties | CS. |
| Varieties | Sears' Synthetic. |
| Chromosome | 1H |
| ad | CS/ H. chilense . |
| Synonym | Prx 1561 |
| Chromosome | 1RS |
| ad | CS/King II 12; Holdfast/King II 1561. |
| tr | Veery 'S' 12. |
| Chromosome | 1V |
| ad | Creso/ D. villosum . |
PER-2 . PER-2 is expressed in young leaf
118, coleoptile and root
816 tissues.
| Chromosome | 2AS |
| Varieties | CS. |
| Chromosome | 2BS |
| Varieties | CS. |
| Varieties | Sears' Synthetic IPSR1190903. |
| Chromosome | 2DS |
| Varieties | CS. |
| Synonym | Per-5 95 |
| Chromosome | 2H |
| ad | CS/Betzes. |
| Chromosome | 2RS |
| ad | CS/Imperial; Kharkov/Dakold. PER-3. PER-3 is expressed in embryo {119, 816} and scuteller 119 tissues. |
| Chromosome | 3AL |
| Varieties | CS. |
| Synonym | Per4 961 |
| Chromosome | 3BL |
| Varieties | CS. |
| Varieties | T. macha IPSR1240005. |
| Varieties | Sears' Synthetic IPSR1190903. |
| Synonym | Per5 961 |
| Chromosome | 3DL |
| Varieties | CS. |
| Varieties | T. macha IPSR 142005. |
| Varieties | Sears' Synthetic IPSR 1190903. Varietal variation for PER-3 was reported in 94. PER-4 . PER-4 is expressed in endosperm tissue {86, 119}. |
| Synonym | Per3 961 |
| Chromosome | 7A |
| Chromosome | 7AS |
| Varieties | CS. |
| Synonym | Per2 961 |
| Chromosome | 4A |
| Chromosome | 4AL |
| Varieties | CS. |
7D
695,7DS {694, 86, 119}.
| Note | 7Ag[e] S 694. |
| tr | Certain CS 7D/ Ag[e] lines. |
| Chromosome | 2DS |
| Varieties | CS. |
| Chromosome | 2S |
| ad | CS/ Ae. longissima |
| Synonym | Pde-A3 1590 |
| Chromosome | 3AS |
| Chromosome | 3A |
| Varieties | CS. |
| Synonym | Pde-B3 1590 |
| Chromosome | 3BS |
| Chromosome | 3B |
| Varieties | CS. |
| Synonym | Pde-D3 1590 |
| Chromosome | 3DS |
| Varieties | CS. |
| Note | 3S[l] S 172. |
| ad | CS/ Ae. longissima . |
| Chromosome | 3VS |
| ad | CS/ D. villosum . |
| Chromosome | 4RL |
| ad | CS/Imperial; Holdfast/King II. |
| Chromosome | 6RL |
| ad | CS/Imperial; Holdfast/King II. Loci were also identified in 6B 1435, 1EL 1435, 1HL 147, 1072, 1H[ch] 352 and 1RL 779. |
| Synonym | Pgm-B1 88 |
| Chromosome | 4AL |
| Varieties | CS. |
| Chromosome | 4DS |
| Varieties | CS. |
| Synonym | Pgm-b1 90 |
| Chromosome | 4H |
| ad | CS/ Betzes. |
| Chromosome | 4H |
| ad | MA/ H. chilense . |
| Chromosome | 4RS |
| ad | CS/Imperial 4RS {1561, 1253}; Kharkov/Dakold 4R 1253; Holdfast/King II 4RS{1561, 1253}. |
| Chromosome | 5H |
| ad | CS/Betzes. |
| Chromosome | 5H |
| ad | CS/ E. trachycaulus . |
| Chromosome | 5RS |
| Chromosome | 5R |
| ad | CS/King II 85; CS/Imperial 706; Kharkov/Dakold 85. |
| tr | CS 4AS-5RL; CS 5BL-5RL. |
| Note | 5S[l] S 85. |
| ad | CS/ Ae. longissima . |
| Chromosome | 5S |
| ad | CS/ Ae. searsii . |
ad,su: CS/ Ae. umbellulata.
| Chromosome | 5V |
| ad | CS/ D. villosum . |
| Chromosome | 2AL |
| Varieties | CS. |
| Chromosome | 2BL |
| Varieties | CS. |
| Chromosome | 2DL |
| Varieties | CS. |
| Note | VI E 808. |
| ad | CS/ E. elongata . |
| Chromosome | 2H |
| ad | CS/Betzes. |
| Synonym | Sod-3 586 |
| Chromosome | 2R |
| ad | CS/Imperial. |
| Chromosome | 2S |
| ad | CS/ Ae. searsii . |
| Chromosome | 7V |
| ad | CS/ D. villosum . |
| Chromosome | 3AS |
| Varieties | CS. |
| Chromosome | 3BS |
| Varieties | CS. |
| Chromosome | 3DS |
| Varieties | CS. |
| Chromosome | 3E |
| ad | CS/ E. elongata . |
| Chromosome | 3H |
| ad | CS/Betzes. |
| Chromosome | 3R |
| ad | CS/Imperial; Kharkov/Dakold. |
| Chromosome | 3S |
| ad | CS/ Ae. longissima . |
| Chromosome | 5AL |
| Varieties | CS. |
| Chromosome | 5BL |
| Varieties | CS. |
| Chromosome | 5DL |
| Varieties | CS. |
| Note | 5Ag[i ] 374. |
| ad | Vilmorin 27/ Th. intermedium . |
| Chromosome | 5H |
| ad | CS/Betzes. |
| Chromosome | 5R |
| ad | CS/Imperial; Kharkov/Dakold. |
| Chromosome | 5S |
| ad | CS/ Ae. longissima . |
| Chromosome | 5U |
| ad | CS/ Ae. umbellulata . |
| Chromosome | 6AL |
| Varieties | CS. |
| Chromosome | 6BL |
| Varieties | CS. |
6Ag[e ]
1575.
ad,su: Rescue/
Th. elongatum .
| Note | 6Ebeta 189. |
| ad | CS/ E. elongata . |
| Synonym | Aco-1 147 |
| Chromosome | 6HL |
| Chromosome | 6H |
| ad | CS/Betzes. |
| Chromosome | 6RL |
| ad | Sturdy/PI 252003. |
| Chromosome | 6S |
| ad | CS/ Ae. longissima . |
| Chromosome | 6S |
| ad | CS/ Ae. searsii . |
| Note | CSU-31 189. |
| ad | CS/ Ae. umbellulata . |
| Chromosome | 6DL |
| Varieties | CS. |
Further alleles at
Aco-A1 and
Aco-B1 are listed in
1127; these have not been tested against those found in
1533.
| Chromosome | 5AL |
| Varieties | CS. |
| Chromosome | 4BL |
| Varieties | CS. |
| Chromosome | 4DL |
| Varieties | CS. |
| Chromosome | 4EL |
| ad | CS/ E. elongata . |
| Chromosome | 5RL |
| ad | CS/King II 5R; Holdfast/ King II 5RL. |
| Chromosome | 4S |
| ad | CS/ Ae. searsii . |
| Synonym | Ndh-B1 513 |
| Chromosome | 4AL |
| Varieties | CS. |
| Synonym | Ndh-B1a 936 |
| Varieties | CS. |
| Synonym | Ndh-B1b 936 |
| Varieties | Sutjeska. |
| Synonym | Ndh-B1c 936 |
| Varieties | Fruskogorka. |
| Synonym | Ndh-A1b 1037 |
| Varieties | Hope, Timgalen. |
| Synonym | Ndh-A1 513 |
| Chromosome | 4BS |
| Varieties | CS. |
| Chromosome | 4DS |
| Varieties | CS. |
| Chromosome | 4E |
| ad | CS/ E. elongata . |
| Synonym | Nadhd-1 147 |
| Chromosome | 4H |
| Chromosome | 4HS |
| ad | CS/Betzes. |
| Chromosome | 4H |
| ad | CS/ H. chilense . |
| Chromosome | 4V |
| ad | CS/ D. villosum . |
| Chromosome | 4RS |
| Chromosome | 4R |
| ad | CS/Imperial, CS/King II {813, 362}; CS/Dakold 362. **NDH-S**[1] 1 813. 4S[l] 813. |
| ad | CS/ Ae. longissima . |
| Note | A 362. |
| ad | CS/ Ae. umbellulata . |
| Chromosome | 3E |
| ad | CS/ E. elongata . |
| Chromosome | 3H |
| ad | CS/Betzes. |
| Chromosome | 3R |
| ad | CS/Imperial. |
| Chromosome | 1AS |
| Varieties | CS. |
| Chromosome | 1ES |
| ad | CS/ E. elongata 1E. |
| Chromosome | 1H |
| dv | H. vulgare cv. Betzes. |
| Synonym | Cat-A1 1466 |
| Chromosome | 4BL |
| Varieties | CS. |
A catalase locus, designated
CAT2 , was mapped 6 cM proximal to
ACO-D2 in an
Ae. tauschii F2 population derived from VIR-1954/VIR-1345 cross
10046. This locus may be orthologous to
CAT-B1 10046.
| Note | Null allele. |
| dv | G3116. |
| Chromosome | 7BL |
| Varieties | CS 9937. |
Suppression of SBEIIb expression alone had no effect on amylose contents; however, suppression of both SBEIIa and SBEIIb expression resulted in wheat starch containing >70% amylose
10534. Combined loss-of-function mutations in
SbeIIa-A, SbeIIa-B, SbeIIb-A , and
SbeIIb-B (PI 670160) increased amylose content by 66% and resistant starch by 753% relative to the control in tetraploid wheat cv. Kronos
11125. Combination of these four mutations with mutations of
SbeIIa-D in hexaploid wheat (PI 670160) increased amylose content by 63% and resistant starch by 1,057% in field experiments relative to the control
11126
| Varieties | Chinese Spring 10658. |
| Marker associations | Detected with primers PPO16 and PPO29. Xwmc41-2D – 2.0 cM – PPO-D1 10386; Xcfd62-2D – 0.2 cM – PPO-D2 – 0.4 cM – Xcfd168-2D – 7.7 cM – Xgwm608-2A – 2.6 cM – PPO-D1 – 0.9 cM – Xbarc349-2D 10931. |
| Varieties | Chinese Spring 10386; Louise 10931; Zhonghou 9507 {10504, 10386}; others {10504, 10386}. |
| c | EF070149 10386. Wheats with this allele tend to have lower PPO activity 10386. |
| Note | EF070150 10386. |
| Varieties | CA 9632 10386; CA 9719 10386; Nongda 183 10504; others {10504, 10386}. |
| c | EF070150 10386. Wheats with this allele tend to have higher PPO activity 10386. |
| Chromosome | 4AL |
| Varieties | CS 10422. |
| Chromosome | 4DS |
| Varieties | CS 10422. |
| Chromosome | 4BS |
| Varieties | CS 10422. The genes for PDI and their promoters were sequenced in 10423. A related sequence on 1BS was shown to be a partial, non-expressed copy in 10424, but not detected in 10409. PCR-RFLP markers for [ TaPDI-4A ] and [ TaPDI-4B ] were designated [ Xvut(PDI)-4A ] and [ Xvut(PDI)-4B ] in 10409. These were also closely associated with Germin (oxalate oxidase 10441) genes 10409. |
| Note | Tapgip3 , AM180658 10608. |
| dv | T. monococcum PI 538722 10608. Not expressed in T. urartu PI 428315 (AM884191) 10608 or in polyploid wheat because of inactivation by an inserted copia transposon in the fourth LRR 10608. |
| Synonym | Tapgip1 10610 |
| Chromosome | 7BS |
| Marker associations | XS13M50-7B - 5 cM - PGIP-B1 - 11.7 cM - Xmgb105s-7B 10608. |
| Note | Tapgip1b , AM884195 10608. |
| Type varieties | T. turgidum ssp. dicoccoides MG4343 10608. This non-expressed allele produces a large amplicon in southern blots using the Pgip sequence as probe, due to an insertion of a Vacuna mutator element 10608. |
| Synonym | Tapgip2 10610 |
| Chromosome | 7DS |
| Type varieties | Langdon 7D(7A) 10610; Langdon 7D(7B) 10610. |
| Chromosome | 7BS |
| Varieties | CS ditelo 7BL 10390. |
| Varieties (alt.) | Chinese Spring Pgip2 10390. |
| Type varieties | Langdon 10390. |
| Chromosome | 7DS |
| Varieties | CS ditelo 7DL 10390. |
| Varieties (alt.) | Chinese Spring Pgip1 10390. |
| Chromosome | 2BL |
| Varieties | CS 10823. |
| Marker associations | F3H-B1/Xgwm1067-2B – 11.4 cM – Xgwm1070-2B 10823. ALLELIC VARIATION |
| Chromosome | 2DL |
| Varieties | CS 10823. |
| Marker associations | Xgwm877-2D – 1.8 cM – F3HD1/Xgwm1264-2D – 22.7 cM – Xgwm301-2D 10823. ALLELIC VARIATION |
| Chromosome | 2BL |
| Varieties | CS 10823. |
| Marker associations | Xgwm1070-2B – 30.1 cM – F3H-B2 10823; Located in the terminal region near Xgwm1027-2B 10823. ALLELIC VARIATION |
| Chromosome | 2A |
| Type varieties | Langdon 10905. |
| Chromosome | 2B |
| Type varieties | Langdon 10905. |
| Chromosome | 2DL |
| Varieties | CS 10906. |
| Synonym | TaZDS-D1a 10906 |
| Varieties | CA9632 10906; Many Chinese wheats and 80 CIMMYT lines 10906. |
Cv. Zhongyou 9507 has lower yellow flour pigment content, preferred for Chinese steamed bread and dry Chinese noodles. A QTL in the
Zds-D1a region explained 18.4% of the variation in yellow pigment content in Zhongyou 9507/CA 9632
10906.
| Chromosome | 2AL |
| Type varieties | Kronos 10913. |
| Varieties | UC1041 10913. |
| Chromosome | 2BL |
| Type varieties | Kronos 10913. |
| Varieties | UC1041 10913. |
| Chromosome | 2DL |
| Type varieties | Kronos 10913. |
| Varieties | UC1041 10913. |
| Chromosome | 5AL |
| Type varieties | Kronos 10913. |
| Varieties | UC1041 10913. |
| Chromosome | 4BL |
| Type varieties | Kronos 10913. |
| Varieties | UC1041 10913. |
| Chromosome | 4DL |
| Type varieties | Kronos 10913. |
| Varieties | UC1041 10913. |
| Varieties | Chinese Spring (11713{; WAWHT2074 11713. GenBank EU649785. |
| Varieties | Ajana 11713. GenBank JX288762. Alleles a and b were distinguished by a CAPS marker based on a SNP at position 2,028 bp. This difference was associated with differences in b flour colour in some Australian accessions 11713. |
AMP-2
| Chromosome | 4AL |
| Varieties | CS. |
| Varieties | T. spelta IPSR 1220017. |
| Chromosome | 4BS |
| Varieties | CS |
| Chromosome | 4DS |
| Varieties | CS. |
| Varieties | Sears' Synthetic IPSR 1190903. |
| Varieties | Bersee. AMP-Ag[i] 2 703. 4Ag[i ] 703. |
| ad | Vilmorin27/ Th. intermedium . |
| Chromosome | 4E |
| ad | CS/ E. elongata . |
| Chromosome | 4H |
| ad | CS/Betzes. AMP-H[ch] 2 703. 4H[ch ] 703. |
| ad | CS/ H. chilense . |
| Chromosome | 4J |
| ad | CS/ Th. junceum . AMP-M[v] 2 235. 4M[v ] 235. |
| su | H-93-33 235. |
| Note | 4RS 702, 93. |
| Chromosome | 4R |
| ad | CS/Imperial. AMP-S[l] 2 703. 4S[l] L 703. |
| ad | CS/ Ae. sharonensis 180. |
| tr | 4DS.4DL-4S[l] L 660. |
| Chromosome | 4V |
| ad | CS/ D. villosum . |
AMP-3
| Chromosome | 7AS |
| Varieties | CS. |
| Chromosome | 7H |
| ad | CS/Betzes. |
a-AMY-1
| Synonym | a-Amy-B1a |
| Varieties | CS. |
| Synonym | a-Amy-B1b |
| Varieties | CS. |
a-AMY-A1
| Synonym | Amy 6A1 1084 |
| Varieties | CS. a-Amy-A1b[5] 7. |
| Varieties | Bezostaya 1; Kavkaz. a-Amy-A1c[5] . [ Amy 6A1[m] 1084]. |
| Varieties | Aka. |
a-AMY-B1
| Synonym | Amy 4 1084, Amy 6B2[o] 1084, Amy 6B1 1084 |
| Varieties | CS 7; Rare. |
| Synonym | Amy 4[m] 1084, Amy 6B1[o ] 1084, Amy 6B2 1084 |
| Varieties | Mara 7. |
| Synonym | Amy 6B1 1084, Amy 6B2 1084, Amy 4 1084 |
| Varieties | Sava 7; Rare. |
| Synonym | Amy 4[m ] 1084, Amy6B2[o ] 1084, Amy 6B1[o ] 1084 |
| Varieties | Sicco 7; Rare. |
| Synonym | Amy 6B2[o ] 1084, Amy 6B1[4' ] 1084, Amy 4[m ] 1084 |
| Varieties | Cappelle-Desprez 7. |
| Synonym | Amy 6B1[4] 1084, Amy 6B2[o] 1084, Amy4[m] 1084 |
| Varieties | Sappo 7. |
| Synonym | Amy 4 1084, Amy 6B2[o] 1084, Amy 6B1[4] 1084 |
| Varieties | Cheyenne 7. |
| Synonym | Amy 6B2[o] 1084, Amy 6B1[o] 1084, Amy 4 1084 |
| Varieties | T. macha Line 1 7; Rare. |
| Synonym | Amy6D 1082 |
| Chromosome | 6DL |
| Varieties | CS. |
| Synonym | Amy6D1 1084, Amy 6D2 1084 |
| Varieties | CS. |
| Synonym | Amy 6D2 1084, Amy6D1 1084 |
| Varieties | Prelude 1082; Cappelle-Desprez 7. |
| Synonym | Amy6D1[m] 1084, Amy 6D2 1084 |
| Varieties | T. spelta var. duhamelianum . |
a-AMY-Ag[i] 1
374. 6Ag[i]
374.
| Chromosome | 6E |
| ad | CS/ E. elongata . |
| Synonym | a-Amy1 146 |
| Chromosome | 6H |
| ad | CS/Betzes. |
su,ad: CS/Imperial; CS/King II; Holdfast/King II.
a-AMY-R[m] 1
13. 6R[m] L
13.
| Chromosome | 6SS |
| Varieties | Wembley derivative 31. |
| al | Ae. speltoides . |
Two types of nomenclature were assigned to the genes encoding the a-AMY-1 isozymes. In one, allelic states were defined for individual isozymes
1084 whereas in the other, several isozymes were considered the products of compound loci {7, 412}. This listing shows the 'alleles' described in
1084 which are assumed in
7 to be synonymous with the a-
Amy-B1a through
a-Amy-B1h nomenclature.
Amy
4 and
Amy 4[1] are unmapped alternatives
1084 which appear to be identical to zymogram bands [bands 9 and 9b
7] forming part of the
a-AMY-B1 phenotype.
Amy 6B1 [with forms
Amy 6B1[o] , and
Amy 6B1[4'] , considered to be mutually exclusive
1084] and
Amy 6B2 [with forms
Amy 62 and
Amy 6B2[o]
1084] describe further aspects of
a-AMY-B1 7. See
a-Amy1 below for further consideration of
Amy 6B2 1084.
a-AMY-2
| Synonym | Amy7A 1082 |
| Chromosome | 7AL |
| Synonym | Amy 7B 1 1084, Amy 7B2 1084 |
| Varieties | CS. |
| Synonym | Amy 7B1 1084, Amy 7B2[m] 1084 |
| Varieties | Hope. The alternative states of Amy 7B2 , namely, Amy 7B2 and Amy 7B2[m] 1084, are identical to the variation in band 2 412. The complete description of the a-Amy-B2 variation also includes variation in band 11 412. |
| Synonym | Amy7D 1082 |
| Chromosome | 7DL |
| Varieties | CS. |
| Synonym | Amy 7D1 1084 |
| Varieties | CS. |
| Synonym | Amy 7D1[o] 1084 |
| Varieties | Largo 7; Sears' Synthetic 7; VPM1 417. It was estimated 902 that there are two a-Amy-1 genes in chromosome 6A and five or six in both 6B and 6D, and three or four a-Amy-2 genes at each of the 7A, 7B, and 7D loci. |
a-AMY-Ag[i] 2
374. 7Ag[i]
374.
| Chromosome | 7EL |
| ad | CS/ E. elongata . |
| Synonym | a-Amy2 146 |
| Chromosome | 7HL |
| ad | CS/Betzes. a-AMY-H[ch] 2 1015. 7H[ch] beta 1015. su,ad: CS/ H. chilense . |
su,ad: CS/Imperial; CS/King II; Holdfast/King II.
a-AMY-S[b] 2
13. 7S[b]
13.
| Chromosome | 7U |
| ad | CS/ Ae. umbellulata . Three other a-Amy2 loci, namely, Amy 6B2, Amy 6D2, and Amy 7B2 , were reported 1084. No variation was observed for the products of Amy 6D2 and Amy 7B2 , although nullisomic analysis located the genes in 6DL and 7B, respectively. In accordance with the Guidelines, these genes are assumed to be part of the a-Amy-D1 and a-Amy-B2 loci, respectively. Amy 6B2 was observed to produce alternative phenotypes 1084. In a test of the segregation of these phenotypes relative to two alternative products of Amy 6B1 , the two loci were found to be linked with a recombination frequency of 20.6% 1084. However, an attempt to confirm the presence of more than one a-Amy locus in 6BL was unsuccessful 7. |
| Synonym | Amy 6B2 1084, Amy-B2 1083 |
| Chromosome | 6BL |
| Varieties | CS. |
| Synonym | a-Amy-B1a |
| Varieties | CS. |
| Synonym | a-Amy-B1b |
| Varieties | CS. |
b-AMY-1
| Synonym | b-Amy-A2a 8, b-B1a 936 |
| Varieties | CS. |
| Synonym | b-B1b 936, b-Amy-A2b 8 |
| Varieties | Koga II.. |
| Synonym | b-B1c 936, b-Amy-A2c 8 |
| Varieties | T. macha IPSR 1240005. |
| Synonym | b-Amy-A2d 8, b-B1d 936 |
| Varieties | Holdfast. |
| Note | _ |
| Synonym | b-Amy-A2e 8, b-B1e_ 936 |
| Varieties | Bezostaya I. |
| Synonym | b-Amy-A1 8 |
| Chromosome | 4BL |
| Varieties | CS. |
| Synonym | b-Amy-A1a 1330}, 8 |
| Varieties | CS. |
| Synonym | b-Amy-A1b 1330, 8 |
| Varieties | Sears' Synthetic IPSR 1190903. |
| Synonym | b-Amy-A1c 1330, b-Amy-A1b 8 |
| Varieties | Ciano 67. |
| Synonym | b-Amy-A1c 1330, 400 |
| Varieties | Manella. |
| Chromosome | 4DL |
| Varieties | CS. |
| Varieties | Sears' Synthetic. Rare. Previously listed alleles b-Amy-D1d and -D1e were found to be b-Amy-B1 alleles 400. Two b-Amy-D[t] 1 alleles were predominant in 60 accessions of T. tauschii 1578. |
| Note | B 1278. |
| ad | Aestivum cv. Alcedo / Ae. caudata line B. |
| Note | 5E[b] L 661. |
| tr | 5AS.5E[b] L. |
| Chromosome | 4H |
| ad | CS/Betzes. |
| Chromosome | 4H |
| ad | CS/ H. chilense . |
| Synonym | b-AmyR1 43, b-Amy-R2 13 |
| Chromosome | 5R |
| Chromosome | 5RL |
| ad | FEC 28/Petkus 43; Holdfast/King II 43, 1280. |
| tr | CS/Imperial 5BL-5RL 43. |
| Note | D 13. |
| Chromosome | 4S |
| ad | CS/ Ae. sharonensis D 13. |
| su | CS/ Ae. sharonensis . |
| ad | CS/ Ae. longissima . |
| Synonym | b-Amy-U2 13 |
| Chromosome | 5U |
| su | CS/ Ae. umbellulata . |
A second set of loci with homology to
b-Amy-1 genes was identified in 2AS, 2BS and 2DS and designated the
Xb-Amy-2 [
b-Amy-2 1331] set. Evidence for these genes derived from crosshybridization with a
b-AMY-H1 cDNA probe
1331. Further members of the same set were identified in 2H
732, and 2R and 2U
1331.
EP-2
An
Ep locus was located in 4RS in King II rye
1280, using Holdfast/King II addition lines and in 4R in Imperial
266 using Chinese Spring/Imperial addition lines.
EST-1
| Synonym | EstA 61 |
| Chromosome | 3AS |
| Varieties | CS. |
| Synonym | EstB 61 |
| Chromosome | 3BS |
| Chromosome | 3B |
| Varieties | CS. |
| Synonym | EstD 61 |
| Chromosome | 3D |
| Chromosome | 3DS |
| Varieties | CS. |
Each of 208 hexaploid accessions carried the same
Est-1 allele except accessions of
T. compactum var.
rubriceps , each of which carried an
Est-B1 or
Est-D1 electrophoretic mobility variant
585.
| Chromosome | 3ES |
| ad | CS/ E. elongata . |
| Chromosome | 3H |
| ad | CS/Betzes. |
| Synonym | EstR 61 |
| Chromosome | 3R |
| ad | CS/Imperial 60; Holdfast/King II 100; Kharkov/Dakold 100. |
| Chromosome | 3S |
| ad | CS/ Ae. longissima . |
EST-2
| Synonym | Est-2A 585 |
| Chromosome | 3A |
| Varieties | CS. |
| Synonym | Est-2B 585 |
| Chromosome | 3BL |
| Varieties | CS. Among 208 hexaploid accessions, an apparent Est-B2 null allele occurred frequently in accessions of T. macha and T. sphaerococcum and occasionally in accessions of T. compactum . The allele was not observed in T. aestivum and T. spelta accessions 585. |
| Synonym | Est-2D 585 |
| Chromosome | 3DL |
| Varieties | CS. |
EST-3
| Synonym | Est-3B 585 |
| Chromosome | 7BS |
| Varieties | CS. |
| Synonym | Est-3D 585 |
| Chromosome | 7DS |
| Varieties | CS. |
| Chromosome | 7H |
| ad | CS/Betzes. One accession carrying an apparent Est-B3 null allele and one carrying an apparent Est-D3 null allele were found among 208 hexaploid accessions 585. |
A 7AS locus encodes three esterase isozymes in immature grains
009.
EST-4
| Synonym | Est-4A 585 |
| Chromosome | 6AL |
| Varieties | CS. |
| Synonym | Est-4B 585 |
| Chromosome | 6BL |
| Varieties | CS. |
| Synonym | Est-4D 585 |
| Chromosome | 6DL |
| Varieties | CS. |
Probable
Est-A4 and
Est-D4 null alleles were detected in several accessions of
T. compactum var.
rubriceps 585; otherwise, no
Est-4 variant occurred among 208 hexaploid accessions
585.
An esterase gene was located in chromosome L7 (= 6Ag[i] ) of
Th. intermedium 361.
EST-5 consists of 20 or more monomeric, grain-specific isozymes that electrofocus between pH 5.6 and 7.0.
| Chromosome | 3AL |
| Varieties | CS. |
| Varieties | Kalyansona9; T. compactum AUS12084756. |
| Chromosome | 3BL |
| Varieties | CS. |
| Varieties | Sears' Synthetic. |
| Chromosome | 3DL |
| Varieties | CS. |
| Varieties | T. macha Line 1. |
| Varieties | T. macha WJR 38548. Sixty Ae. tauschii lines revealed six Est-D[t] 5 alleles 1578. |
Encoding of the endosperm esterases of hexaploid wheat by 12-15 genes in five compound loci located in 3AL, 3BL, 3DL, 3AS and 3DS was postulated in
1204. Three and six alleles at
Est-D[t] 5 (in
Ae. tauschii ) were reported in
756 and
1578, respectively.
In
S. cereale , in addition to
EST-R1 , genes encoding leaf esterases were located in three chromosomes
1561. These included a gene designated
EST8 in 6R in cvs. Imperial and King II, a gene designated
EST2 and two genes, designated
EST6 and
EST7 , which are part of a separate compound locus
1560, in 5RL in Imperial, and a gene designaged
EST10 in 4R of King II and 4RL of Imperial. In
Hordeum vulgare , genes encoding leaf esterases were in 3H {1071; see also, 520,580} and 7H
520.
| Note | 3Ag[i] 374. |
| ad | Vilmorin 27/ Th. intermedium . |
| Chromosome | 3H |
| ad | CS/Betzes. |
| Chromosome | 3H |
| ad | CS/ H. chilense . |
| Synonym | EstB 737 |
| Chromosome | 6R |
| ad | CS/ S. montanum . |
su,ad: CS/ Ae. bicornis .
| Chromosome | 3S |
| ad | CS/ Ae. longissima . |
EST-6 EST-6 is a dimeric enzyme that electrofocuses around pH 7.6 and is specific to endosperm.
| Chromosome | 2AS |
| Varieties | CS. |
| Chromosome | 2BS |
| Varieties | CS. |
| Chromosome | 2DS |
| Varieties | CS. |
| Varieties | Sears' Synthetic IPSR 1190903. |
| Chromosome | 2MS |
| su | CS/ Ae. comosa . |
| Chromosome | 2RS |
| al | DS2 x RxL10 rye popn. |
A group of leaf esterase isozymes controlled by the long arms of the homoeologous group 3 chromosomes were reported
919. The relationship of these esterases to EST-2 and to the leaf esterase designed EST-6 reported in
629 was not determined.
EST-7
| Chromosome | 2AL |
| Varieties | CS. |
| Chromosome | 2BL |
| Varieties | CS. |
| Chromosome | 2DL |
| Varieties | CS. |
| Varieties | Synthetic {IPSR 1190903}. |
| Note | 2[E] 812. |
| ad | CS/ E. elongata . |
| Chromosome | 2HL |
| ad | CS/Betzes. |
| Chromosome | 2RL |
| ad | CS/Imperial. |
| su | Holdfast/KingII. |
| Note | 2R[m] alpha 812. |
| ad | CS/ S. montanum . |
| Chromosome | 2U |
| ad | CS/ Ae. umbellulata . |
| Chromosome | 2V |
| ad | CS/ D. villosum . |
EST-8
EST-8 consists of about 10 isozymes that electrofocus between pH 4.5 and 6.5 and are expressed only in vegetative tissues. EST-8 is likely to be the enzyme previously described in
919 and
629.
EST-A8 629,
814. [
Est-A6 629]. 3AL
629.
| Chromosome | 3AS |
| Varieties | CS. |
13
| Chromosome | 3BS |
| Varieties | CS. |
LPX-1
| Synonym | Lpx-B1 516 |
| Chromosome | 4AL |
| Varieties | CS 516. |
| Marker associations | Xksu919(Lpx-1)-4A 0091. |
| Synonym | Lpx-A1 516 |
| Chromosome | 4BS |
| Varieties | CS 516. |
| Marker associations | Xcn110(Lpx-1)-4B {0367, 0269}. |
| Synonym | Lpx-A1a 936 |
| Varieties | CS. |
| Synonym | Lpx-A1b 936 |
| Varieties | Bosanka 1533. |
| Chromosome | 4BS |
| Marker associations | Xksm62-4B – 8 cM – LpxB1.1 – 13 cM – Xwmc617b-4B 10303. |
| Type varieties | UC1113 10303. |
| Type varieties | Kofa, deletion 10303. |
| Chromosome | 4B |
| Varieties | CS. |
| Chromosome | 4DS |
| Varieties | CS. |
| Chromosome | 4ES |
| ad | CS/ E. elongata . |
| Chromosome | 4H |
| ad | CS/Betzes. |
LPX-2
| Note | 5AL 516,10303. |
| Varieties | CS. |
| Marker associations | Xksu919(Lpx-2)-5A 91. |
| Note | 5BL 516,10303. |
| Varieties | CS. |
| Marker associations | Xksu919(Lpx-2)-5B 91; Xcn111(Lpx-2)-5B 269. |
| Chromosome | 5DL |
| Varieties | CS. |
| Chromosome | 5EL |
| ad | CS/ E. elongata . |
| Chromosome | 5H |
| ad | CS/Betzes. |
| Chromosome | 5S |
| ad | CS/ Ae. searsii . |
| Chromosome | 5V |
| ad | CS/ D. villosum . |
| Chromosome | 4AL |
| Type varieties | UC1113 (GenBank DQ474244) and Kofa (GenBank DQ474242) 10303. |
| Marker associations | Xwmc617a-4A – 10 cM – Lpx-A3 – 15 cM – Xgwm192b-4A 10303. |
| Chromosome | 4B |
| Type varieties | UC1113 and Kofa (GenBank DQ474243) 10303. |
AADH-1
| Synonym | Adh-A2 584 |
| Chromosome | 5AL |
| Varieties | CS. |
| Marker associations | XksuG44-5A (proximal) - 6.9 cM - AADH-A1 - 24.7 cM - Xcdo412-5 (distal) 9959. |
| Varieties | CS; 133 other accessions 584. |
| Varieties | T. spelta ; K-24696; other accessions 584. |
| Synonym | Adh-B2 584 |
| Chromosome | 5BL |
| Varieties | CS. |
| Synonym | Adh-D2 584 |
| Chromosome | 5DL |
| Varieties | CS. |
| Note | C 1278. |
| ad | Alcedo/ Ae. caudata line C. |
| Synonym | Adh-E2 518 |
| Chromosome | 5EL |
| ad | CS/ E. elongata . |
| Chromosome | 5RL |
| ad | Holdfast/King II. |
AADH-2
| Synonym | Adh-A3 508 |
| Chromosome | 6A |
| Synonym | Adh-B3 508 |
| Chromosome | 6B |
| Chromosome | 6BL |
| Varieties | CS 513; Carola 1279. |
| Synonym | Adh-D3 508 |
| Chromosome | 6DL |
| Chromosome | 6D |
| Varieties | CS 513; Carola 1279. |
6Ag[e ]
1575.
ad,su: Rescue/
Th. elongatum .
| Chromosome | 6RL |
| ad | Holdfast/King II. |
| Chromosome | 6V |
| ad | CS/ D. villosum . |
The
AADH-1 and
AADH-2 loci were designated with the synonyms
Adh-2 and
Adh-3 , respectively, in some publications in addition to
508,
518,
584. These include:
510,
509,
511,
519,
517,
587, 1066, 1139}.
NDH-2
| Chromosome | 7A |
| Varieties | Hope. |
| Chromosome | 7DS |
| Varieties | CS. |
| Chromosome | 7RS |
| ad | CS/Imperial, CS/King II, Holdfast/King II (7R). |
| Chromosome | 3BL |
| Varieties | CS. |
| Chromosome | 3DL |
| Varieties | CS. |
A
NDH locus, designated
NADHD2 , was mapped 27 cM from
Est-D10 in an
Ae. taushii F2 population derived from VIR-1954/VIR-1345
10046. This locus may be homologous to
NDH-D3 .
| Chromosome | 3HL |
| ad | CS/Betzes. |
| Chromosome | 6RL |
| ad | Holdfast/King II, CS/Imperial (6R), CS/King II (6R). |
| Note | 3S[l] L 813. |
| ad | CS/ Ae. longissima ; CS/ Ae. sharonesis (3S[l] ). |
Based on the correspondence of the electrophoretic patterns, isoelectric points (pIs) and chromosomal location, it was proposed that
NDH-3 (NADH dehydrogenase),
DIA1 (diaphorase) and
MNR1 (menadione reductase) represent the same locus
0356.
| Chromosome | 3AS |
| Varieties | CS. |
| Chromosome | 3BS |
| Varieties | CS. |
| Chromosome | 3ES |
| ad | CS/ E. elongata . |
| Chromosome | 3HS |
| ad | CS/Betzes. |
| Chromosome | 3RS |
| ad | CS/King II, CS/Imperial (3R). |
| Synonym | Pept-B1 1533 |
| Chromosome | 6BL |
| Varieties | CS. |
| Varieties | Cappelle-Desprez. |
| Chromosome | 6DL |
| Varieties | CS. |
| Chromosome | 6J |
| ad | CS/ Th. junceum . |
| Chromosome | 6V |
| ad | CS/ D. villosum . |
AHASL 1
| Synonym | Imi3 10099 |
| Chromosome | 6AL |
| Varieties (alt.) | CDC Teal IMI 15A Imi3 10099. |
| dv | T. monococcum mutant EM2 (mutant of susceptible line TM23 10102. |
| Synonym | Imi2 10099 |
| Chromosome | 6BL |
| Varieties | CDC Teal IMI 11A = PTA3953 10099. |
| Synonym | Imi1 10099 |
| Chromosome | 6DL |
| Varieties | BW755 = Grandin*3/Fidel-Fs-4 10099. |
PSY-1
| Chromosome | 7AL |
| Type varieties | Kofa 10230. |
| Marker associations | Xwmc809-7A – 5.8 cM – Yp7A 10501. |
| Type varieties | Kofa 10230. |
| Marker associations | Xwmc809-7A - 5.8 cM - Yp7A 10501. |
| Varieties | Chinese common wheats with low yellow pigment content 10501; PH82-2 10501; Shaan 9314 10501; Xinong 336 10501. |
| c | GenBank EF600064 10501. 37-bp insertion in intron 2 (231 bp fragment for marker Yp7A ) 10501. 676-bp insertion in intron 4 10530. |
| Varieties | M564 10650. |
| c | GenBank EU650391 10650; No 37-bp insertion in intron 2 and no 676-bp insertion in intron 4 10530; High yellow pigment cultivars: Aroona (PI 464647) 10530; Dundee (PI 89424, PI 106125) 10530; Raven (PI 303633, PI 330959) 10530. |
| Type varieties | Kofa {10530, 10230}; Strongfield 10653; T. dicoccoides DS6 10652. |
| c | EU096090 {10530, 10230}; FJ393524 10652. |
| Type varieties | T. dicoccum DM26 10652. |
| c | FJ393525 10652. |
| Varieties | WAWHT2074 10920. |
| Marker associations | Xwgm344-7A - 3.9 cM - Psy1-A1t - 9.9 cM - Ccfa2257a-7A 10920. |
| c | GenBank HM006895 10920. |
| Chromosome | 7BL |
| Type varieties | Kofa10230. |
| Marker associations | Xcfa2040-7B – 12 cM – PSY1-B1 – 5 cM – Xgwm146-7B 10230. |
| Note | GenBank EU096093 10530. |
| Synonym | 10530 |
| Varieties | Chinese Spring {10654, 10650, 10530}; Spelt SP9 10652. |
| Type varieties | T. dicoccoides DS4 10652. |
| c | FJ393529 10652; FJ393528 10652; EU650392 10650; EU096094 10530; EU649789 10654. |
| Type varieties | T. dicoccoides DS3 10652. |
| c | FJ393531 10652. |
| Type varieties | T. dicoccoides DS8 10652. |
| c | FJ393532 10652. |
| Type varieties | T. dicoccum DM26 10652. |
| c | FJ393533 10652. |
| Type varieties | T. dicoccum DM33 10652. |
| c | FJ393534 10652. |
| Type varieties | T. dicoccum DM37 10652. |
| c | FJ393535 10652. |
| Note | Previously designated Psy1-B1b 10656. |
| Type varieties | Kofa. |
| c | EU096092 10530; DQ642439 10230. |
| Note | GenBank EU096095 10530. |
| Synonym | Psy-E1a 10530 |
| Varieties | Agatha (7EL translocation) 10530. |
Similar to EU096095, but with P to L substitution at amino acid 422
10530.
| al | Ae. speltoides Ae48 10652. |
PSY-2 Homology with the same gene in rice (
Psy2 )
10230.
| Chromosome | 5A |
| Type varieties | Kofa 10230. |
| Chromosome | 5B |
| Type varieties | Kofa 10230. |
| Marker associations | Xgwm191-5B – 17 cM – PSY-B2 10230. |
PPO-2
| Synonym | PPO-A2 10931 |
| Chromosome | 2AL |
| Marker associations | Xcfa2058-2A – 0.4 cM – PPO-A2 – 0.4 cM – Xiwa174-2A – 8.3 cM – Xiwa7593-2A – 0.6 cM – PPO-A1 – 11.0 cM – Xwmc181-2 10931. |
| Synonym | PPO-B2 10930 |
| Chromosome | 2B |
| Marker associations | Xiwa175/Xiwa4866-2B - 0.7 cM - PPO-B2 - 2.3 cM - Xiwa7593-2B 10931. |
| Varieties | Louise 1211. |
| c | GenBank JN632508 10930. |
| Synonym | PPO-D2 10930 |
| Chromosome | 2DL |
| Marker associations | Xcfd62-2D – 0.2 cM – PPO-D2 – 0.4 cM – Xcfd168-2D – 7.7 cM – Xgwm608-2A – 2.6 cM – PPO-D1 – 0.9 cM – Xbarc349-2D 10931. |
| Varieties | Penawawa 10930. |
| c | HQ228153 10930. Wheats with this allele tend to have lower PPO activity {10385, 10386}. |
2.3. Endosperm storage proteins⌂ Home
| Note | 1 1116. |
| Varieties | Hope. |
| Note | 2[* ] 1116. |
| Varieties | Bezostaya 1. |
| Note | Null allele 1116. |
| Varieties | CS. |
| Varieties | V74, Spain 1115. |
| Varieties | 132c, Poland 1115. |
| Varieties | 112-29, Sudan 1115. |
| Synonym | GLU-A1-I 1527 |
| Type varieties | PI 94683, USSR, T. dicoccum . |
| Synonym | GLU-A1-II 1527 |
| Type varieties | CI 12213, India, T. dicoccum ; Lambro 1523. |
| Note | 26 478. |
| Varieties | BT-2288 478. |
| Type varieties | Chinook, Canada. |
| Type varieties | Nugget Biotype 1, Canada, T. durum . |
| Note | 3[* ] 1146. |
| Varieties | David 1. |
| Note | 39+40 1232. |
| i | T. thaoudar IPSR 1020006/6[*] Sicco. |
| Note | 41+42 1231. |
| i | T. thaoudar G3152/6[*] Sicco. |
| Note | 21[*] 602. |
| Varieties | W29323, W3879, W31169. |
| Note | 2 |
| Synonym | *B] 02106. v: Bankuti 1201. The allele designated Glu-A1u and Glu-A1-1u in the appropriate list below encodes a high molecular weight glutenin subunit (denominated 2[*B] ) that is identical to subunit 2[*] apart from one amino acid difference involving the exchange of serine for cysteine (which itself is due to a C to G point mutation at the 1181 bp point of the coding region of 2[*] ). The authors of 02106 suggest that the additional cysteine residue facilitates the formation of further disulphide bonds (cf. the 1Dx5 subunit) which might lead to an improvement in gluten quality characters. Glu-A1v [03137 |
| Note | 2.1* 10327 |
| Varieties | KU-1094, KU-1026, KU-1086, Grado, KU-1139 10327. |
| Note | 2' 10327. |
| Varieties | TRI14165/91 10327. The alleles formerly designated t to x in 959 were renamed x to ab because allele t in 847 and alleles u, v and w in 1069 had precedence. |
| Note | 7 1116. |
| Varieties | Flinor. |
| Note | 7+8 1116. |
| Varieties | CS. Subunit 8 of Glu-B1b (7+8) is more acidic in isoelectric focusing than subunit 8 of Glu-B1d (6+8) 555. Variation in the mobility of subunits designated 7 was observed 1118, according with later observations 714, 1069. The subunit encoded by Glu-B1v 1069 has the same mobility as subunit 7 of Glu-B1c (7+9); it could be the same subunit as 7' encoded by Glu-B1ai [714]. Variation in the staining intensity of subunit 7 in different lines was observed 1069; a duplication of the gene encoding subunit 7 probably occurred in cultivar 'Red River 68', as evidenced by increased intensity of the subunit in SDSPAGE and by approximately doubled intensity of restriction fragments carrying the gene in Southern blotting 9989. |
| Note | 7+9 1116. |
| Varieties | Bezostaya 1. |
| Note | 6+8 1116. |
| Varieties | Hope. |
| Type varieties | Kronos 11497. Simultaneous and individual truncation mutations were found in Glu-B1x and Glu-B1y subunits in Kronos mutant lines 11497. Germplasm was accessioned as PI 692251 (T4-0865, Bx6 single mutant), PI 692253 (T4-2197, By8 single mutant) and PI 692252 (T4-1280, Bx6 + By8 combined mutant). |
| Note | 20 1116.20x+20y 03133. |
| Varieties | Federation. |
| Note | 13+16 1116. |
| Varieties | Lancota (rare). Primers were designed to distinguish subunit By8 from By8*, for distinguishing subunit By9-containing alleles from non-By9 alleles, and for diagnosing the presence of Glu-B1f . |
| Note | 13+19 1116. |
| Varieties | NS 335 (rare). |
| Note | 14+15 1116. |
| Varieties | Sappo (rare). |
| Note | 17+18 1116. |
| Varieties | Gabo. Although alleles Glu-B1i encoding subunits 17+18, and Glu-B1bc encoding subunit 6+17, apparently share a common subunit (Ax17 and By17, respectively) it is not clear that this is in fact true. |
| Note | 22 1116. |
| Varieties | Serbian (rare). |
| Note | 23+24 778. |
| Varieties | Spica D. |
| Synonym | GLU-B1-I 1527 |
| Type varieties | PI 94640, Iran, T. dicoccum . |
| Synonym | GLU-B1-II 1527 |
| Type varieties | PI 355505, Germany, T. dicoccum . |
| Synonym | GLU-B1-III 1527 |
| Type varieties | PI 352354, Ethiopia, T. dicoccum . |
| Synonym | GLU-B1-V 1527 |
| Type varieties | PI 94633, Morocco, T. dicoccum . |
| Note | 7+11 478. |
| Varieties | BT-2288. Subunit 11 of Glu-B1s (7+11) was so numbered in 478 because its mobility is the same as one of the subunits encoded by a GLU-D1 allele (2+11) described in 755. |
| Varieties | Supreza, Canada. |
Possible low gene expression at
Glu-B1 was noted for
Glu-B1w , where subunits 6[*] +8[*] stain very faintly
1146.
| Synonym | Glu-B1-VII 1526, Glu-B1t 959 |
| Type varieties | Canoco de Grao Escuro, Portugal, T. turgidum . |
| Synonym | Glu-B1-VIII 1526, Glu-B1u 959 |
| Type varieties | Tremez Mollez, Portugal, T. durum . |
| Synonym | Glu-B1w 959, Glu-B1-X 1524 |
| Type varieties | Quaduro, Italy, T. durum . |
| Synonym | Glu-B1x 959, Glu-B1-XI 1523 |
| Type varieties | Athena, Italy, T. durum . |
| Note | 18[* ] 1146. |
| Varieties | David. |
| Note | 26+27 1146. |
| Varieties | Cologna 1. One of the Glu-B1af subunits was numbered 26 in 1146; 26 was previously used to number the subunit encoded by Glu-A1k 478. |
| Note | 28+29 1146. |
| Varieties | Forlani. Subunit 28 of Glu-B1ag (28+29) 1146 is referred to as subunit 19[*] in 1068. |
| Note | Null allele 782. |
| Varieties | Olympic mutant. |
| Note | 7' 714. |
| Varieties | Adonis. |
| Note | 8 759. |
| Varieties | AUS 14444, Afghanistan. |
| Note | 7[*] +8[*] 899. |
| Varieties | Norstar. |
| Note | 7[OE] +7[OE] +8[*] 899. |
| Varieties | Benkuti 1201; Glenlea 899; Klein Universal II 10196; Tezanos Pintos Precoz 10196; Tobari 66 10196. Other genotypes are listed in 10196. Many of the cultivars carrying the over-expressed subunit 7 encoded by Glu-B1al show %UPP values that transcend the normal range observed for cultivars that lack this subunit 10089, which presumably is associated in some way with its unusually high amount in the grain. The underlying cause of the increased amount may be due to an increased transcriptional rate compared to other alleles, for which a known difference in promoter sequence compared to other alleles expressing normal levels of this subunit 10090 may be responsible. However, there is evidence that over-expression is due to duplication of subunit 7 10196. Regarding to subunit 8[*] , evidence was presented to indicate that in Glenlea, one of the standard cultivars for the allele, this subunit is the same as subunit 8 10808. |
| Note | 18 1229. |
| Varieties | Royo. |
| Note | 6 1229. |
| Varieties | BG-2013. |
| Note | 7+16 1229. |
| Varieties | BG-3545. |
| Note | 30+31 1229. |
| Varieties | Marinar. |
| Note | 32+33 1229. |
| Varieties | BG-1943. |
| Note | 34+35 1229. |
| Varieties | Jeja Almendros. |
| Note | 13 1229. |
| Varieties | PI 348435. |
| Note | 13+18 1229. |
| Varieties | PI 348449. |
| Note | 37 1032. |
| Varieties | Shedraya Polesja. |
| Synonym | Glu-B1-XVIII 03122 |
| Type varieties | T. dicoccoides Israel-A 10186. |
| Type varieties | T. dicoccoides PI 481521 10186. |
| Type varieties | T. dicoccoides PI 478742 10186. |
| Note | 7+19 10425. |
| Varieties | Triticales: Lasko, Dagno, Tewo, Vision, Dato 10425. |
| Note | 7+26 10425. |
| Varieties | Triticales: Presto, Modus 10425. The number 26 was also used to designate a subunit encoded by Glu-A1k and Glu-A1-1k . |
| Note | 17'+18[* ] 10809. |
| Type varieties | TGR-2246 10809. |
| Note | 13[**] +8[*] 10809. |
| Type varieties | TGR-003 10809. |
| Note | 7+17 10810. |
| Varieties | CWI-59797, T. aestivum var. ferrugineum 10810. |
| Note | 7b[*] +8 10808. |
| Varieties | Eshimashinriki 10808. |
| Note | 7+8a[* ] 10808. |
| Varieties | Jing 411 10808; Tasman 10808. In a study including emmer wheats ( T. dicoccon ) 00115, new subunits named 7[+] (in accessions MG5400/5 and MG30835/1), 8[-] (in accessions MG5400/5, MG30835/1, MG5333/1 and MG5507) and 13[-] (in accession MG5282/2) were found and provisionally assigned to Glu-B1 . Until confirmed, they are not included in the Glu-B1 list. |
| Note | 20*+33* 11490. |
| Type varieties | T. turgidum ssp. durum Mexican landrace accession 22 (CWI52215) 11490. |
| Note | 13+16* 11490. |
| Type varieties | T. turgidum ssp. durum Mexican landrace accession 19 (CWI52200) 11490. |
| Note | 7+22 11490. |
| Varieties | T. aestivum ssp. aestivum cv. Wilbur (CW13735) 11490. |
| Note | 7+22* 11490. |
| Type varieties | T. turgidum ssp. durum Iranian landrace accession 51 (CWI57280) {11490 |
| Note | 13*+15* 11490. |
| Type varieties | T. turgidum ssp. durum Iranian landrace accession 46 (CWI56913) 11490. |
| Note | 15 11491. |
| Varieties | T. aestivum ssp. compactum PI 157920 11491. |
| Note | 14+8 11491. |
| Varieties | T. aestivum ssp. macha PI 272554, PI 278660, PI 290507 11491. |
| Note | 6+8* 11491. |
| Varieties | T. aestivum ssp. macha PI 428177 11491. |
| Note | 17 11491. |
| Varieties | T. aestivum ssp. sphaerococcum CItr 4531, PI 272581, PI 282452 11491. |
| Note | 20+22* 11493. |
| Type varieties | T. turgidum ssp. durum Moroccan landraces MGB-2963, MGB-3152 11493. |
| Note | 20* 11493. |
| Type varieties | T. turgidum ssp. durum North American cv. MGB-66023 11493. Glu-B1cq [11492]. 7+8* 11492. |
| Type varieties | T. turgidum ssp. turgidum BGE048494 11492. Glu-B1cr [11492]. 8*.1+20y 11492. |
| Type varieties | T. turgidum ssp. durum BGE045649 11492, BGE047535 11492. Glu-B1cs [11492]. 20x 11492. |
| Type varieties | T. turgidum ssp. durum BGE045673 11492. Glu-B1ct [11540]. 6+(8) 11540. |
| Type varieties | T. turgidum ssp. durum Langdon 11540. |
| Note | 2+12 1116. |
| Varieties | CS. Primers were designated that enabled Dx2 to be distinguished from Dx5 and Dy10 from Dy12 10641. |
| Note | 3+12 1116. |
| Varieties | Hobbit. |
| Note | 4+12 1116. |
| Varieties | Champlein. |
| Note | 5+10 1116. |
| Varieties | Hope. |
| Note | 2+10 1116. |
| Varieties | Flinor (rare). |
| Note | 2.2+12 1116. |
| Varieties | Danchi (rare). Glu-D1f is present at high frequencies in wheats of southern Japan. Its presence may be associated with white salted noodle (Udon) quality 10573. |
| Note | 5+9 478. |
| Varieties | BT-2288. Subunit 9 of Glu-D1g (5+9) was so numbered in 478 because its mobility is the same as one of the subunits encoded by Glu-B1c (7+9). |
| Note | 5+12 1145. |
| Varieties | Fiorello, Italy. Cultivar Fiorello is given as a standard for Glu-D1h encoding subunits 5+12 and for Glu-D1w encoding subunits 5[*] +10. An attempt to resolve this apparent conflict will be made in a future update. |
| Note | Null 107. |
| Varieties | Nap Hal, Nepal. |
| Note | 2+12[*] 1146. |
| Varieties | Tudest. |
| Note | 2 421. |
| Sources / synonyms | CS/Timstein 1D. Glu-D1k 421 appears to have arisen as the result of a deficiency of subunit 12 from Glu-D1a (2+12); subunits 2 and 12 are referred to as D1 and D5 in 421. |
| Note | 12 759. |
| Varieties | AUS 10037, Afghanistan. |
| Note | 10 759. |
| Varieties | AUS 13673, Afghanistan. |
| Note | 2.1+10 759. |
| Varieties | AUS 14653, Afghanistan. |
| Note | 2.1+13 755. |
| Varieties | AUS 14519, T. macha . One of the Glu-D1o subunits was numbered 13 in 755; 13 was previously used to number a subunit encoded by Glu-B1f (13+16) and Glu-B1g (13+19) 1116. |
| Note | 36 1233. |
| i | Iranian landrace accession 3048/5[*] Sicco. |
| Note | 2+11 124. |
| Varieties | Flinor. |
| Note | 2.3+12 1229. |
| Varieties | PI 348465. |
| Note | 38 1032. |
| Varieties | Leningradka. |
| Note | 43+44 668. |
| dv | Ae. tauschii accession TA2450/2[*] . |
| Note | 2+10' 836. |
| Varieties | Coker 68-15. |
| Note | 2.1+10.1 755. |
| dv | Ae. tauschii . |
| Note | 5[*] +10 03124. |
| Varieties | Fiorello 03124. Note that the cultivar Fiorello is given as a standard for Glu-D1h encoding subunits 5+12 and for GluD1w encoding subunits 5[*] +10. An attempt to resolve this apparent conflict will be made in a future update. |
| Note | 2+T2 755.2[t] +12.2[t ] 03124. |
| dv | Ae. tauschii . |
| Note | 3[t] +12.2[t ] 03124. 3+T2 755. |
| dv | Ae. tauschii . |
| Note | 3+10 755. |
| dv | Ae. tauschii . |
| Note | 3+10.3 755. |
| dv | Ae. tauschii . |
| Note | 4.1+10 755. |
| dv | Ae. tauschii . |
| Note | 4+10 755. |
| dv | Ae. tauschii . |
| Note | 5.1+10.2 755. |
| dv | Ae. tauschii . |
| Note | 2.1[t] +12.2[t] 03124. 2.1+T2 1578. |
| dv | Ae. tauschii . |
Currently undesignated for reasons given in the preamble to this section.
| Note | 1.5+T2 1578. 1.5[t] +12.2[t ] 03124. |
| dv | Ae. tauschii . |
| Note | 1.5+10 1578. |
| dv | Ae. tauschii . |
| Note | 2.1+10.5 1578. |
| dv | Ae. tauschii . |
| Note | 1.5+12 1578. |
| dv | Ae. tauschii . |
| Note | 3+10.5 1578. |
| dv | Ae. tauschii . |
| Note | 2.2[* ] 02107. |
| Varieties | MG315. |
| Note | 1.5[t] +10.1[t] 03124. |
| dv | Ae. tauschii . |
| Note | 2[t] +10.1[t] 03124. |
| dv | Ae. tauschii . |
| Note | 1.5[t] +10.2[t] 03124. |
| dv | Ae. tauschii . |
| Note | 3[t] +10.1[t] 03124. |
| dv | Ae. tauschii . |
| Note | 2.1[t] +10.2[t] 03124. |
| dv | Ae. tauschii . |
| Note | 2[t] +12.3[t] 03124. |
| dv | Ae. tauschii . |
| Note | 1[t] +10[t] 03124. |
| dv | Ae. tauschii . |
| Note | 1[t] +12[t] 03124. |
| dv | Ae. tauschii . |
| Note | 1[t] +10.1[t] 03124. |
| dv | Ae. tauschii . |
| Note | 4[t] +12.2[t] 03124. |
| dv | Ae. tauschii . |
| Note | 1[t] +12.3[t] 03124. |
| dv | Ae. tauschii . |
| Note | 1.5[t] +11[t] 03124. |
| dv | Ae. tauschii . |
| Note | 1.5[t] +10.3[t ] 03124. |
| dv | Ae. tauschii . |
| Note | 1[t] +11[t] 03124. |
| dv | Ae. tauschii . |
| Note | 2.1[t] +12.4[t] 3124. |
| dv | Ae. tauschii . |
| Note | 3[t] +10.2[t] 03124. |
| dv | Ae. tauschii . |
| Note | 4[t] +10.1[t] 03124. |
| dv | Ae. tauschii . |
| Note | 4[t] +10.2[t] 03124. |
| dv | Ae. tauschii . |
| Note | 5[t] +11[t] 03124. |
| dv | Ae. tauschii . |
| Note | 5[t] +10.1[t] 03124. |
| dv | Ae. tauschii . |
| Note | 5[t] +12.2[t] 03124. |
| dv | Ae. tauschii . |
| Note | 5[*t] +null 03124. |
| dv | Ae. tauschii . |
| Note | 5[*t] +12 3124. |
| dv | Ae. tauschii . |
| Note | 5'+12 10091. |
| Varieties | W958 10091. This putative new allele encodes two subunits that have very similar electrophoretic mobilities compared to subunits 5+12 encoded by Glu-D1h , but analysis using the specific PCR primers for Dx5 described in 10092 and 10093 shows that the x-type subunit of Glu-D1bo , provisionally denominated 5' 10091, does not appear to be the same protein as subunit 5 10091. Definitive evidence awaits sequencing information (See note to allele Glu-D1-1s ). |
| Note | 5*t+10.1[t] 10426. |
| Type varieties | Ae. tauschii TD81 10426. Subunit 10.1[t] possesses a mobility slightly lower than subunit 10 in SDS-PAGE and its deduced amino |
acid sequence is similar to subunit 12 (8 amino acid differences)
10426; the authors used the complete coding sequence to make phylogenetic comparisons with 19 other subunits including both x-type and y- type subunits and concluded that a
Glu-1 gene duplication event occurred about 16.83 million years ago.
| Note | 1.6[t] +12.3[t] 10642. |
| dv | Ae. tauschii TD16 10642. |
| Note | 2'+12 10810. |
| Varieties | CWI-64806, T. aestivum var. aestivum 10810. |
| Note | 2''+10 10810. |
| Varieties | CWI-65297, T. aestivum var. erythroleucon 10810. |
| Note | 2''+12 10810. |
| Varieties | CWI-60509, T. aestivum var. graecum 10810. |
| Note | 1Ag[i] 374. |
| ad | Vilmorin 27/ Th. intermedium . |
| Chromosome | 1ES |
| ad | CS/ E. elongata . |
HMW glutenin y-type subunit Ee1.5 encoded by this locus was sequenced
10439 and compared with other y-type subunits, particularly subunit 1Dy10. It has major deletions in its middle region and is one of the smallest known HMW glutenin subunits. It has an additional Cys residue in the middle of the repetitive domain but lacks one Cys residue commonly found towards the end of this domain. These changes may influence inter- or intra-molecular disulphide bond formation.
Four {10660, 10661} and 11
10662 alleles were observed in
Agropyron elongatum (E[e] genome, 2n = 10X = 70) and named
Aex1 to
Aex5 (producing x-type subunits) and
Aey1 to
Aey10 (producing y-type subunits).
Aex4, Aey7 and
Aey9 were very similar to three alleles in the diploid progenitor
Lophopyrum elongatum {10439, 10663}. The C-terminal regions of three of the y-type subunits (products of
Aey8, Aey9 and
Aey10 ) were more similar to x-type subunits than to other y-type subunits
10662. The subunit from
Aex4 contained an additional cysteine residue, which may be associated with good processing quality in wheat introgression lines
10662. Allele
Aey-4 was a chimeric gene formed by recombination of two other genes
10662.
Chinese
T. aestivum cultivar Xiaoyanmai carries a subunit with electrophoretic mobility in 10% SDSPAGE well beyond that of subunits so far observed in
T. aestivum . It may derive from
Agropyron elongatum , which was used in the breeding program that led to the variety
1538. It has not been given a subunit number or allelic designation, because its genetic control has not been elucidated.
| ad | CS/ L. elongatum W0622 781. |
| ad | Langdon/ L. elongatum DGE-1 10644. |
| al | L. elongatum PI 531719 10644. |
| Synonym | Hor 3 1337 |
| Chromosome | 1HL |
| Chromosome | 1H |
| ad | CS/Betzes 781. |
| al | Various barley cultivars 1337. |
| Chromosome | 1H |
| ad | CS/ H. chilense . |
38 accessions (natural populations) of
Hordeum chilense carrying the following 10 subunits were used as the maternal parents of 121 lines of primary tritordeum, and evaluations for associations with breadmaking quality initiated
03114. Subunits 1[Hch] , 2[Hch] and 3[Hch] were previously referred to as H[ch] a, H[ch] b and H[ch] c
03112.
| Note | 1[Hch] 03114. |
| al | H. chilense accession H1 03114. |
| Note | 2[Hch] 03114. |
| al | H. chilense accession H11 03114. |
| Note | 3[Hch] 03114. |
| al | H. chilense accession H7 03114. |
| Note | 4[Hch] 03114. |
| al | H. chilense accesion H1603114. |
| Note | 5[Hch] 03114. |
| al | H. chilense accession H47 03114. |
| Note | 6[Hch] 03114. |
| al | H. chilense accession H220 03114. |
| Note | 7[Hch] 03114. |
| al | H. chilense accession H293 03114. |
| Note | 8[Hch] 03114. |
| al | H. chilense accession H297 03114. |
| Note | 9[Hch] 03114. |
| al | H. chilense accession H252 03114. |
| Note | 10[Hch] {0 3114}. |
| al | H. chilense accession H210 03114. |
| Note | 1H[t] L 1037. |
| ad | CS/ E. trachycaulum . |
| Synonym | Sec 3 1336 |
| Chromosome | 1RL |
| Chromosome | 1R |
| ad | CS/Imperial; Holdfast/ King II 1340. |
| tr | CS Imperial 1DS.1RL 1356. |
| Note | 1[r] -4[r] 03116. |
| Varieties | Indiana hexaploid triticale 03116. |
| Note | 2[r] -6.5[r] 03116. |
| Varieties | Graal hexaploid triticale 03116. |
| Note | 6[r] -13[r] 03116. |
| Varieties | Almao hexaploid triticale 03116. |
| Note | 2[r] -9[r] 03116. |
| Varieties | Olympus hexaploid triticale 03116. |
| Note | 6.5[r] 03116. |
| Varieties | Clercal hexaploid triticale 03116. |
| Note | 0.8[r] -6[r] 03115. |
| Varieties | Carmara hexaploid triticale 03115. |
| Note | 5.8[r] 03115. |
| Varieties | Arrayan hexaploid triticale 03115. From study of chromosome substitutions in bread wheat 03117, it was found that a chromosome 1R carrying HMW secalin subunit 6.5[r] ( Glu-R1e ), originally derived from the 'Petkus' rye population, was associated with bread making quality (i) intermediate between chromosome 1A carrying the null allele Glu-A1c and chromosome 1A carrying HMW glutenin subunit 2[*] encoded by Glu-A1b ; (ii) equivalent to a chromosome carrying HMW glutenin subunit 7 encoded by Glu-B1a ; and (iii) inferior to chromosomes 1D with distinct alleles. There is a difficulty in the assignment of subunit 6[r] in the GLU-R1-1 and GLU-R1-2 lists, since it appears as an x-type subunit in allele Glu-R1c and as a y-type subunit in allele Glu-R1f . It is currently provisionally assigned to the GLU-R1-1 list since, based upon its relative electrophoretic mobility, it is considered more likely to be an x-type subunit. Some of the remaining designations should also be considered as provisional since they too are not free of ambiguity. Five new x-type subunits (plus the null allele) and four y-type subunits were reported in 10094. They vary principally through duplications and deletions of the tri-, hexa- and nona-peptide motifs found in the central repetitive region of the subunits. Orthologous genes were found to be more closely related than paralogous genes, supporting the hypothesis that gene duplication occurred before Triticeae speciation {10095, 10094}. GLU-R[m] 1 1339. 1R[m] L {1340, 1339}. |
| ad | CS/ S. montanum {1340, 1339}. |
| Note | 1S[l] L 1228. |
| Marker associations | In Ae. longissima 2 /Ae. longissima 10, GLU-S[l] 1, G LU - S[l] 3 , one glucose phosphate isomerase locus, and three gliadin loci were mapped relative to one and other 1228 as follows: GLU-S[l] 1 – 15.9 cM – GPI-S[l] 1 – 38 cM – GLI-S[l] 4 – 7.1 cM – GLU-S[l] 3 – 0.9 cM – GLI-S[l] 1 – 5.6 cM – GLI-S[l] 5. GLU-S[l] 1 is located in 1S[l] L and the other loci are in 1S[l] S. |
| al | Taenitherum crinitum PI 204577 10449. |
| Note | 2[*] . |
| Varieties | Bezostaya 1. A PCR marker specific for the Glu-A1-1c (Ax2[*] ) allele was developed in 0147. |
| Type varieties | PI 94683, USSR, T. dicoccum . |
| Type varieties | CI 12213, India, T. dicoccum . |
| Note | 1'. |
| Type varieties | PI 352359, Germany, T. dicoccum ; Lambro. |
| Type varieties | Chinook, Canada. |
| Type varieties | Nugget Biotype 1, Canada. |
| Note | 1". |
| Type varieties | Corado, Portugal. |
| Note | 2[**] . |
| Type varieties | PI 61189, USSR, Aric 581/1. |
| Note | 3[*] . |
| Varieties | David 1. |
| Note | 2[***] . |
| Type varieties | Melianopus 1528. |
| Note | 39. |
| i | T. thaoudar IPSR 1020006/6[*] Sicco. |
| Note | 41. |
| i | T. thaoudar G3152/6[*] Sicco. |
| Note | 21[* ] 602. |
| Varieties | W29323, W 3879, W 31169. Glu-A1-1t is a provisional designation; definitive evidence that subunit 21[*] , which has a mobility similar to that of subunit 21, is a 'x-type' and not a 'y-type' protein has not been obtained. |
| Note | 2[*B] 02106. |
| Varieties | Bankuti 1201. |
| Note | 40. |
| i | T. thaoudar IPSR1020006/6[*] Sicco. |
| Note | 42. |
| i | T. thaoudar G3152/6[*] Sicco. |
| Note | 7. |
| Varieties | CS. A PCR marker (2373 bp) for the Glu-B1-1a (Bx7) allele was developed in 0145. |
| Note | 7,7[*] . |
| Varieties | Flinor, Bezostaya 1, Owens, Norstar. |
| Note | 20. |
| Varieties | Federation. |
| Note | 13. |
| Varieties | Lancota. |
| Note | 23. |
| Varieties | Spica D. |
| Type varieties | PI 94640, Iran, T. dicoccum . |
| Type varieties | PI 355505, Germany, T. diccocum . |
| Type varieties | PI 352354, Ethiopia, T. dicoccum . |
| Type varieties | PI 94633, Morocco, T. dicoccum . |
| Varieties | Supreza, Canada. |
| Type varieties | Canoco de Grao Escuro, Portugal. |
| Type varieties | Tremez Mollez, Portugal. |
43 P ROTEINS
| Type varieties | Quaduro, Italy. |
| Type varieties | Athena, Italy. |
| Note | 26. |
| Varieties | Cologna 1. |
| Note | 28. |
| Varieties | Forlani. |
| Note | Null. |
| Varieties | Olympic mutant. |
| Note | 30. |
| Varieties | Marinar. |
| Note | 32. |
| Varieties | BG-1943. |
| Note | 34. |
| Varieties | Jeja Almendros. |
| Note | 37. |
| Varieties | Shedraya Polesja. |
| Note | 6[*] . |
| Varieties | Dawbill. |
| Note | 6.8 03116. |
| Varieties | Carnac hexaploid triticale 03116. |
| Note | 7[OE] 899. |
| Varieties | Benkuti 1201 {10196, 10197}; Glenlea 899; Klein Universal II 10196; Tezanos Pintos Precoz 10196; Tobari 10196. |
| Note | 20* 11490. |
| Type varieties | T. turgidum ssp. durum Mexican landrace accession 22 (CWI52215) 11490. |
| Note | 9. |
| Varieties | Bezostaya 1. |
| Note | 16. |
| Varieties | Lancota. |
| Note | 22. |
| Varieties | Serbian. |
| Type varieties | PI 355505, Germany, T. dicoccum . |
| Type varieties | PI 352354, Ethiopia, T. dicoccum . |
| Type varieties | PI 94633, Morocco, T. dicoccum . |
| Note | 11. |
| Varieties | BT-2288. |
| Varieties | Supreza, Canada. |
| Note | 8[*] . |
| Varieties | Dawbull. |
| Type varieties | Canoco de Grao Escuro, Portugal. |
| Type varieties | Tremez Mollez, Portugal, T. durum . |
| Type varieties | Quaduro, Italy, T. durum . |
| Note | 18[*] . |
| Varieties | David. |
| Note | 27. |
| Varieties | Cologna 1. |
44
| Note | 29. |
| Varieties | Forlani. |
| Note | Null. |
| Varieties | Olympic mutant. |
| Note | 31. |
| Varieties | Marinar. |
| Note | 33. |
| Varieties | BG-1943. |
| Note | 35. |
| Varieties | Jeja Almendros. |
| Note | 20y 03116. |
| Varieties | Carnac hexaploid triticale 03116. |
| Synonym | 8[**] 10643 |
| Varieties | XM1404-2 10643. Glu-B1-2ah . Currently undesignated. |
| Note | 8b[*] 10808. |
| Varieties | ACA 601 10808; Nidera Baguette 10 {10808 |
| Note | 33* 11490. |
| Type varieties | T. turgidum ssp. durum Iranian landrace accession 51 (CWI57280) 11490. |
| Note | 22* 11490. |
| Type varieties | T. turgidum ssp. durum Iranian landrace accession 51 (CWI57280) 11490. Glu-B1-2an [11492]. 8*.1 11492. |
| Type varieties | T. turgidum ssp. durum BGE045649 11492, BGE047535 11492. Glu-B1-2ao [11540]. (8) 11540. |
| Type varieties | T. turgidum ssp. durum Langdon 11540. |
Eight alleles at
GLU-B1-1 and 10 alleles at
GLU-B1-2 in
T. turgidum var.
dicoccoides populations were described in
798. In a further study using different germplasm of this species
205, 19 alleles at
GLUB1 were observed, including 15 not previously observed; the 19 alleles included 11 alleles at
GLU-B1-1 and 14 alleles (including the null allele) at
GLU-B1-2 , although, as the authors pointed out, it was not conclusively clear how many of these alleles were distinct from each other, or from others previously observed.
| Note | 4. |
| Varieties | Champlein. |
| Note | 5. |
| Varieties | Hope. PCR markers specific for the Glu-D1-1d (Dx5) allele were developed in 0145 and 0147. |
| Note | 2.2. |
| Varieties | Danchi. |
| Note | Null. |
| Varieties | Nap Hal, Nepal. |
| Note | 2.1. |
| Varieties | AUS 14653, Afghanistan. |
| Note | 2.3. |
| Varieties | PI 348465. |
| Note | 38. |
| Varieties | Leningradka. |
| Note | 43 668. |
| i | Ae. tauschii accession TA2450/2[*] . |
| Note | 4.1 755. |
| dv | Ae. tauschii . |
| Note | 1.5 1578. D[t] x1.5 10306. |
| dv | Ae. tauschii accession SQ-214 10306. A restriction enzyme-based method named the 'restricted deletion method' was used to characterize the ORF of this subunit 10306 (as in the case of subunit D[t] y10 encoded by Glu-D1-2u 10306. Allelespecific PCR markers were developed based upon SNPs located at the non-repetitive N-terminal 10320. |
| Note | 2.2[*] 02107. |
| Varieties | MG315. |
| Note | 5.1 755. |
| dv | Ae. tauschii . This allele was designated Glu-D1-1j in the 1998 Catalogue edition. |
| Note | 5' 10091. |
| Varieties | W958 10091. This putative allele encodes a subunit, provisionally denominated 5' 10091, that has a very similar electrophoretic mobility compared to subunit 5 encoded by Glu-D1-1d , but analysis using the specific PCR primers for Dx5 described in 10092 and 10093 shows that it does not appear to be the same protein as subunit 5 10091. Definitive evidence awaits sequencing information (See note to allele GluD1bo ). |
| Note | 12. |
| Varieties | CS. A PCR marker (612 bp) for the Glu-D1-2a (Dy12) allele was developed in 0145. |
| Note | 10. |
| Varieties | Hope. PCR markers (576 bp and 2176 bp) for the Glu-D1-2b (Dy10) allele were developed in 0145 and 0147, respectively. |
| Note | Null. |
| Varieties | Nap Hal, Nepal. |
| Note | 12[*] . |
| Varieties | Tudest. |
| Note | 13. |
| Varieties | AUS 14519, T. macha . |
| Note | 36. |
| i | Iranian landrace 3048/5[*] Sicco. |
| Note | 44 668. |
| i | Ae. tauschii TA2450/2[*] . |
| Note | 10' 836. |
| Varieties | Coker 68-15. |
| Note | T1 755. |
| dv | Ae. tauschii . |
| Note | T2 755. |
| dv | Ae. tauschii . |
| Note | 10.1 755. |
| dv | Ae. tauschii . |
| Note | 10.2 755. |
| dv | Ae. tauschii . |
| Note | 10.3 755. |
| dv | Ae. tauschii . |
| Note | 10.5 1578. |
| dv | Ae. tauschii . |
| Note | 12' 03122. |
| Varieties | PI-348495 spelt wheat accession 03122. |
| Note | 12.1[t ] 03124. |
| dv | Ae. tauschii . |
| Note | 12.3[t] 03124. |
| dv | Ae. tauschii . |
| Note | 12.4[t] 03124. |
| dv | Ae. tauschii . |
| Note | D[t] y10 10306. |
| Varieties | Ae. tauschii accession SQ-214 10306. A restriction enzyme-based method named the 'restricted deletion method' was used to characterize the |
ORF of this subunit
10306 (as in the case of subunit 1.5 (or D[t] x1.5
10306) encoded by
Glu-D1-1l 10306. This subunit was first recognized as being different from subunit 1- encoded by
Glu-D1-2b in hexaploid wheat in
10307.Six combinations involving 5 HMW subunits [1A (u-z)] are listed in
420, from a study of 109 genotypes including representatives of botanical varieties. Alleles in
T. turgidum var.
dicoccoides populations, 12 at
GLU-A1-1 and 3 at
GLU-A1-2 , were described in
798. In a further study using different germplasm of this species
205, 14 alleles at
GLU-A1 were observed, including 12 not previously found; the 15 alleles included up to 15 alleles at
GLU-A1-1 (with up to 10 not previously observed), and 5 alleles at
GLU-A1-2 (with 4 not previously observed) (numbers take the null allele into account). The uncertainty in numbers is due to the very similar electrophoretic mobilities of some of the subunits compared with others observed either in this study or previously.
In a study including emmers (
T. dicoccum )
00115, new subunits named 1[+] and 2[-] were found in accessions MG4378/1 and MG5380/1, respectively, and provisionally assigned to
GLU-A1 . Until confirmed, they are not included in the
GLU-A1 list.
| Note | 1[r] 03116. |
| Varieties | Indiana hexaploid triticale 03116. |
| Note | 2[r] 03116. |
| Varieties | Graal hexaploid triticale 03116. |
| Note | 6[r] 03116. |
| Varieties | Alamo hexaploid triticale 03116. |
| Note | 0.8[r] 03115. |
| Varieties | Carmara hexaploid triticale 03115. |
| Note | 5.8[r] 03115. |
| Varieties | Arrayan hexaploid triticale 03115. |
| Note | 4[r] 03116. |
| Varieties | Indiana hexaploid triticale 03116. |
| Note | 6.5[r] 03116. |
| Varieties | Graal hexaploid triticale 03116. |
| Note | 13[r] 03116. |
| Varieties | Alamo hexaploid triticale 03116. |
| Note | 9[r] 03116. |
| Varieties | Olympus hexaploid triticale 03116. There was difficulty in assigning subunit 6[r] in the GLU-R1-1 and GLU-R1-2 lists, since it appeared as an x-type subunit in allele Glu-R1c and as a y-type subunit in allele Glu-R1f . It is currently provisionally assigned to the GLU-R1-1 list since, based upon its relative electrophoretic mobility, it is considered more likely to be an x-type subunit. Some of the remaining designations should also be considered as provisional since they too are not free of ambiguity. |
Alleles and subunits at
GLU-V1-1 and
GLU-V1-2 : The following is analogous to the
GLU-1-1 and
GLU1-2 lists given earlier to identify x-type and y-type subunits in wheat. It was assumed that where an allele at
GLU-V1 produces only a single subunit, it is an x-type subunit and so encoded by
GLU-V1-1 rather than by
GLU-V1-2 ; the electrophoretic mobilities of the subunits are all greater, though some only marginally so, than subunit 7 encoded by
Glu-B1-1a (an x-type subunit), and extend beyond the mobility of subunit 12 encoded by
Glu-D1-2a (a y-type subunit)
1651; therefore, it is quite possible that any one of the subunits designated as encoded by
GLU-V1-1 is, in fact, encoded by
GLU-V1-2 . The designation given here is intended to be the most practically useful until the identities of the genes encoding the alleles are directly established.
| Note | 71 1651. |
| al | D. villosum . |
| Note | 72 1651. |
| al | D. villosum . |
| Note | 73 1651. |
| al | D. villosum . |
| Note | 74 1651. |
| al | D. villosum . |
| Note | 75 1651. |
| al | D. villosum . |
| Note | 76 1651. |
| al | D. villosum . |
| Note | 77 1651. |
| al | D. villosum . |
| Note | 78 1651. |
| al | D. villosum . |
| Note | 79 1651. |
| al | D. villosum . |
| Note | 80 1651. |
| al | D. villosum . |
| Note | Null 1651. |
| al | D. villosum . |
| Note | 81 1651. |
| al | D. villosum . |
| Note | 83 1651. |
| al | D. villosum . |
| Note | 85 1651. |
| al | D. villosum . |
| Note | Null 1651. |
| al | D. villosum |
| Note | 82 1651. |
| al | D. villosum . |
| Note | 84 1651. |
| al | D. villosum . |
| Note | 86 1651. |
| al | D. villosum . |
| Chromosome | 1AS |
| Varieties | CS. |
| Synonym | cs 1358 |
| Varieties | CS. |
| Synonym | h 1358 |
| Varieties | Hope. |
| Synonym | cs 1358 |
| Varieties | CS. |
| Synonym | i 1358 |
| Varieties | India 115. |
| Chromosome | 2AL |
| Varieties | CS. |
| Note | Null allele. |
| Varieties | Cajeme 71. |
| Chromosome | 2BL |
| Varieties | CS. |
| Chromosome | 2DL |
| Varieties | CS. |
Orthologous genes were identified in
Ae. speltoides and
T. timopheevii 908. All durum wheats investigated had the genotype
Isa-A1b, Isa-B1b .
| Synonym | GSP 614 |
| Chromosome | 5B |
| Varieties | CS 614; Glenlea 0385. In 1185 sequence of clone TSF33 from cv. Soft Falcon (GenBank X80379) was identical to this allele, as are ESTs for cv. CS (dbEST BJ235798) and cv. CNN (dbEST BE423845). |
| Synonym | GSP 614 |
| Chromosome | 5DS |
| Varieties | CS 614; Glenlea 0385. |
| dv | Ae. tauschii CPI1110799 (GenBank AF177219) 0383. |
| Marker associations | Co-segregation of Gsp-D1 and Ha 614. |
| dv | Ae. tauschii TA1583 (GenBank AY252079) Pina-D1a, Pinb-D1a 3105; TA2475 (GenBank AY252087) Pina-D1a, Pina-D1i 03105. |
| dv | Ae. tauschii TA2369 (GenBank AY252081) Pina-D1c, Pinb-D1h 03105; CPI110799 (GenBank AF177219) 0383. |
| dv | Ae. tauschii TA2536 (GenBank 252093) Pina-D1c, Pinb-D2i 03105; TA2374 (GenBank AY252046) Pina-D1d, Pinb-D1i 03105; TA2458 (GenBank AY252084) Pina-D1e, PinbD1i 03105; TA2436 (GenBank AY252048) Pina-D1f, Pinb-D1i 03105. |
| dv | Ae. tauschii TA2527 (GenBank AY252066) Pina-D1c, Pinb-D1h 03105; TA2512 (GenBank AY252092) Pina-D1d, Pinb-D1i 03105; TA2495 (GenBank AY252091) Pina-D1e, PinbD1i 03105. |
| dv | Ae. tauschii TA1649 (GenBank AY252063) Pina-D1d, Pinb-D1h 03105; TA2455 (GenBank AY252073) Pina-D1d, Pinb-D1i 03105. |
| dv | Ae. tauschii TA1599 (GenBank AY252062) Pina-D1a, Pinb-D1j 03105. |
| dv | Ae. tauschii TA1691 (GenBank AY252064) Pina-D1a, Pinb-D1j 03105. |
| Varieties | Yecora Rojo (GenBank AY255771) Pina-D1b, Pinb-D1a 03105. |
| Sources / synonyms | CS*/Red Egyptian 5D, Pina-D1, Pinb-D1 and Gsp-D1 10077. In 1185 the sequence of clone TSF69 from cv. Soft Falcon (GenBank S72696) is identical, as are ESTs for cv CS (dbEST BJ237450) and cv CNN (dbEST BE422565). This locus has a large deletion encompassing genes PINA-D1, PINA-D1 and GSP-D1 10077. In 1185 partial-sequence clone TSF61 from cv. Soft Falcon (GenBank X80380) was identical to this allele. |
| Chromosome | 5AL |
| Varieties | CS 0215. |
68
| Chromosome | 5BL |
| Varieties | CS 0215. |
| Chromosome | 5DL |
| Varieties | CS 0215. |
| Chromosome | 5AL |
| Varieties | CS 0215. |
| Chromosome | 5BL |
| Varieties | CS 0215. |
| Chromosome | 5DL |
| Varieties | CS 0215. |
| Varieties | Grekum 114 0215; Kirgizsky Karlik 0215. |
The relationship of this gene series with a
Hst-A1, Hst-B1, Hst-D1 series in group 5 chromosomes
0216 based on DNA hybridization studies was not established.
| Chromosome | 5AL |
| Varieties | CS. |
| Varieties | Cappelle-Desprez. |
| Varieties | Sears' Synthetic. |
| Chromosome | 5BL |
| Varieties | CS. |
| Varieties | Cappelle-Desprez. |
| Varieties | Sears' Synthetic. |
| Chromosome | 5DL |
| Varieties | CS. |
| Varieties | Cappelle-Desprez. |
| Varieties | Purple Pericarp. |
| Varieties | Sears' Synthetic. |
IBF-Ag [i]
| Note | 5Ag[i] 818. |
| ad | Vilmorin/ Th. intermedium . |
| Chromosome | 5EL |
| ad | CS/ E. elongata . |
| Chromosome | 4H |
| ad | CS/Betzes. |
| Chromosome | 5RL |
| ad | CS/Imperial, CS/KingII. |
| Chromosome | 5S |
| ad | CS/ Ae. sharonensis . |
| Chromosome | 5U |
| ad | CS/ Ae. umbellulata . |
69
| Chromosome | 1AL |
| Varieties | CS 351. A PCR marker specific for PUR-A1 was developed in 9976. |
| Chromosome | 1BL |
| Varieties | CS 351. A PCR marker specific for PUR-B1 was developed in 9976. |
| Chromosome | 1DL |
| Varieties | CS 351. PCR marker specific for PUR-D1 was developed in 9976. A locus in chromosome 5DS affects the level of lipopurothionin 351. |
| Note | 1RL 1261 = |
| Chromosome | 1RS |
| Chromosome | 1BL |
| ad | CS/Imperial. |
| su | Several 1R(1B) lines. |
| tr | Aurora, Kavkaz. A PCR marker specific for PUR-R1 was developed in 9976. |
| Chromosome | 1AL |
| Varieties | CS. |
| Chromosome | 1B |
| Sources / synonyms | CS[*] /Hope 1B. |
| Chromosome | 1DL |
| Varieties | CS. |
| Chromosome | 1U |
| ad | CS/ Ae. umbellulata . |
| dv | T. urartu unspecified accession 03103; TA763 (GenBank AJ302094) {03104, 03108}; TA808 (GenBank AJ302095) {03104, 03108}. |
| Note | 5A[m] S 0083. |
| dv | T. monococcum DV92 (cultivated), G3116 (spp. aegilopoides ) (GenBank AJ242715) 0083; unspecified acession (GenBank AJ249933) 03103; PI277138 (GenBank AJ302093) 03104; PI418582 (GenBank AJ302092) 03104; T. monococcum spp. monococcum TA2025, TA2026 (GenBank AY622786), TA2037 (GenBank AJ242715) 03108; T. monococcum spp. aegilopoides |
TA183, TA291, TA546, TA581 (GenBank AY622786)
03108. In
T. monococcum PINa-A[m] 1 is completely linked to
GSP-A[m] 1 0083.
| Chromosome | 5DS |
| Varieties | CS (GenBank DQ363911) 03108; Capitole (GenBank X69914) 03110. This locus has a large deletion encompassing genes PINa-D1, PINb-D1 and GSP-D1 . This allelic combination confers a harder kernel texture than Pina-D1a/Pinb-D1b 10077. |
| Varieties | Bellevue 0249; Capitole (GenBank X69914) 03110; Courtot 0249; Fortuna 0249; Galaxie 0249; Heron 1035; Renan (GenBank CR626934) 10440; Soissons 0249. |
| Varieties (alt.) | Aurelio Pinb-D1a 0249; Bezostaja Pinb-D1b 0249; Bilancia Pinb-D1a 0249; Bolero Pinb-D1a 0249; Brasilia Pinb-D1b 0249; Centauro Pinb-D1a 0249; Cerere Pinb-D1b 0249; CS PinbD1a 0249, 452; Colfiorito Pinb-D1b 0249; Cologna 21 Pinb-D1b 0249; David Pinb-D1b 0249; Democrat Pinb-D1b 0249; Etruria Pinb-D1b 0249; Francia Pinb-D1b 0249; Gemini Pinb-D1b 0249; Genio Pinb-D1b 0249; Gladio Pinb-D1b 0249; Lampo Pinb-D1a 0249; Leone Pinb-D1a 0249; Leopardo Pinb-D1a 0249; Libero Pinb-D1a 0249; Livio Pinb-D1a 0249; Marberg Pinb-D1b 0249; Mentana Pinb-D1a 0249; Mieti Pinb-D1b 0249; Mose PinbD1a 0249; Neviana Pinb-D1a 0249; Newana Pinb-D1b 0249; Oscar Pinb-D1a 0249; Pandas Pinb-D1b 0249; Pascal Pinb-D1b 0249; Penawawa Pinb-D1a 03104; Sagittario Pinb-D1b 0249; Salgemma Pinb-D1b 0249; Saliente Pinb-D1b 0249; Salmone Pinb-D1b 0249; Serena Pinb-D1a 0249; Serio Pinb-D1b 0249; Veda Pinb-D1b 0249; Zena Pinb-D1b 0249. |
| dv | Ae. tauschii upspecified accession (GenBank AJ249935) 03103; TA2475 (GenBank AY252037) PinbD1i, Gsp-D1b 03105; TA1599 (GenBank AY252011) Pinb-D1j, Gsp-D1g 03105; TA1691 (GanBank AY252013) Pinb-D1j, Gsp-D1h 03105; Ae. tauschii unidentified accession (GenBank AJ249935) 03103; Ae. tauschii CPI 110799 (GenBank CR626926) 10440. |
Pina-D1a is present in all soft hexaploid wheats and possibly all hard hexaploid wheats that carry a hardness mutation in puroindoline b
452,
1035,
0082,
0204,
0295.
| Note | Null allele. |
| i | Falcon/7[*] Heron, Heron/7[*] Falcon 03109; Gamenya Seln.{0203, 0298}; Heron/7[*] Falcon sel. {0203, 0298}; PI 644080 (Alpowa/ID377s//7*Alpowa) 10429; Nearisogenic pairs were developed in McNeal, Outlook, Hank, Scholar and Explorer 10527. |
| Varieties | Butte 86 1035; Eridano 0249; Falcon 1035; Glenlea (GenBank AB262660). This BAC clone also contains Pinb-D1a 10431; Kalyansona0249; Super X 0249; Yecora Rojo 0204. |
| Varieties (alt.) | Amidon Pinb-D1a 0249; Ciano Pinb-D1a 0249; Dorico Pinb-D1a 0249; Golia Pinb-D1a 0249; Guadalupe PinbD1a 0249; Barra Pinb-D1a 0249; Inia 66 Pinb-D1a 0249; Indice Pinb-D1a 0249; Jecora Pinb-D1a 0249; Manital Pinb-D1a 0249; Mendos Pinb-D1a 0249; Padus Pinb-D1a 0249; Prinqual Pinb-D1a 0249; Sibilia Pinb-D1a 0249. |
Present only in some hard hexaploid wheats. Pina-D1b is associated with harder texture than Pinb-D1b {0177, 0206}. This allele is now defined as a 15,380 bp deletion versus other possible puroindoline a nulls {10428, 10391}.
| dv | Ae. tauschii TA2369 (GenBank AY252031) Pinb-D1h, Gsp-D1c ; TA2527 (GenBank AY252015) Pinb-D1h, Gsp-D1e 03108; Ae. tauschii TA10 (GenBank AY649746) 03108. |
| dv | Ae. tauschii PI452131 (GenBank AJ302098) Pinb-D1i 03104; PI554318 (GenBank AJ302099) Pinb-D1k 03104; TA1649 (GenBank AY252012) Pinb-D1h, Gsp-D1f 03105; TA2374 (GenBank AY251996) Pinb-D1i, Gsp-D1d 03105; TA2512 (GenBank AY252042) Pinb-D1i, Gsp-D1e 03105; TA2455 (GenBank AY252022) Pinb-D1i, Gsp-D1f 03105; TA2536 (GenBank AY252043) 03105; Ae. tauschii TA 1704 (GenBank AY649744) 03108. |
| dv | Ae. tauschii TA2458 (GenBank AY252034) Pinb-D1i, Gsp-D1d 03105; TA2495 (GenBank AY252041) Pinb-D1i, Gsp-D1e 03105. |
| dv | Ae. tauschii TA2436 (GenBank AY251998) Pinb-D1i, Gsp-D1d 03105. |
| dv | Ae. tauschii TA1583 (GenBank AY252029) Pinb-D1a, Gsp-D1b 03105. |
| Varieties | X. aegilotriticum CIGM86.946-1B-0B-0PR-0B (GenBank AY573898) Pinb-D1o 10118. |
| Varieties | X. aegilotriticum CIGM87.2784-1B-0PR-0B (GenBank AY573899) Pinb-D1k 10118. |
| Varieties | X. aegilotriticum CIGM88.1363-0B (GenBank AY573900) Pinb-D1o 10118. |
| Synonym | homonym: Pina-D1b/Pinb-D1h(t) |
| Sources / synonyms | CS*/Red Egyptian 5D substitution line, Pinb-D1q, Gsp-D1i 10077. |
| Varieties | Bindokku 10305; Cheyenne-A 10305; Chosen 68 10305; Gaiyuerui 10316; KT020-584 10432; Saiiku 18 10305; Saiiku 44 10305; Safangmai 10316; Tachun2 10316; ZM2851 10316; ZM2855 10316. This allele is currently used to denote a large deletion of undetermined size that involves PINa-D1, PINbD1 and GSP-D1 10077. The deletion of both puroindolines is associated with harder kernel texture than other known puroindoline hardness alleles {10077, 10305, 10432}. |
| Synonym | Pina-D1c 10168 |
| Varieties | Baikezaomai Chinese landraces 10208; Chengduguangtou 10208; Guangtouxiaomai 10208; Sanyuehuang 10208; Xiaoyuhua 10208. |
| Varieties (alt.) | Fortuna (USA) Pinb-D1a 10168; Glenman Pinb-D1a 10168. Pina-D1l has a C deletion leading to an open reading frame shift and premature stop codon; PINA null, hard kernel texture 10208. |
| Varieties | Hongheshang (GenBank EF620907) 10208. C-to-T substitution: Proline-35 to serine; hard kernel texture 10208. |
| Varieties | Baimangchun 10208; Hongheshang (GenBank EF620907) 10208; Xianmai (GenBank EF620908) 10208; Yazuixiaomai Chinese landraces 10208; Yazuizi 10208; Zhuantoubaike 10208. G-to-A substitution: Tryptophan-43 to stop codon; PINA null hard kernel texture 10208. |
| dv | Ae. tauschii RM0182 (GenBank AY608595) 10311. |
| Varieties | T. aestivum Jing 771 (GenBank AY599893) 10316. |
| Varieties | U29 (GenBank AB181238) 10316; Muu-27 (homonym 'a2', Pina-D1p ) 10316. |
| dv | T. urartu TA763 (GenBank AJ302103) 3104; TA808 (GenBank AJ302104) {03104, 03108}. |
| Varieties | Hill 81 452. |
| Varieties (alt.) | Adder Pina-D1a 0317; Amidon Pina-D1b 0249; Aurelio Pina-D1a 0249; Barra Pina-D1b 0249; Bilancia Pina-D1a 0249; Bolero Pina-D1a 0249; Centauro Pina-D1a 0249; CS Pina-D1a 0249,452; Ciano Pina-D1b 0249; Dorico Pina-D1b 0249; Fortuna (USA) Pina-D1b 0249; Glenman Pina-D1b 0249; Golia Pina-D1b 0249; Guadalupe Pina-D1b 0249; Inia 66 Pina-D1b 0249; Jecora Pina-D1b 0249; Idice Pina-D1b 0249; Karl Pina-D1a 0317; Lampo Pina-D1a 0249; Leone Pina-D1a 0249; Leopardo PinaD1a 0249; Libero Pina-D1a 0249; Livio Pina-D1a 0249; Manital Pina-D1b 0249; Mendos Pina-D1b 0249; Mentana Pina-D1a 0249; Mose Pina-D1a 0249; Neviano Pina-D1a 0249; Oscar Pina-D1a 0249; Padus Pina-D1b 0249; Penawawa Pina-D1a 03104; Prinqual Pina-D1b 0249; Serena Pina-D1a 0249; Sibilia Pina-D1b 0249; Sigyn II Pina-D1a 0317. |
| dv | Ae. tauschii unspecified accession (GenBank AJ249936) 03103; TA1583 (GenBank AY251981) PinaD1a, Gsp-D1b 03105. |
Pinb-D1a is present in all soft hexaploid wheats and possibly all hard hexaploid wheats carrying the
PinbD1b, -D1c, -D1d, -D1e, or
-D1f mutations
452,
1035,
0082,
0204,
0295.
| Chromosome | 5DS |
| i | Paha[*] 2/Early Blackhull/5[*] Paha 0203,0298; Early Blackhull der./5[*] Nugaines seln. {0203, 0298}; hard sib sel. from Weston 03107; PI 644081 (Alpowa/ND2603//7*Alpowa) 10429. |
| Sources / synonyms | CS[*] 7/Cheyenne 5D 452. |
| Varieties | Thatcher 0204; Wanser 452; hard component of Turkey 0204; Cheyenne (GenBank DQ363914) 10315; Renan |
(GenBank CR626934)
10440.
| i | PI 644082 (Alpowa/Red Bobs//7*Alpowa) 10429. |
| Varieties | Avle 0082; Bjorke 0082; Portal 0082; Reno 0082; Tjalve 0082. Pinb-D1c is a "loss-of-function" mutation resulting from the replacement of a leucine by a proline at position 60 0082. |
| i | PI 644083 (Alpowa/Mjolner//7*Alpowa) 10429. |
| Varieties | Bercy 0082; Mjolner 0082; Soissons (homonym 'b1') 10433. Pinb-D1d is a "loss-of-function" mutation resulting from the replacement of a tryptophan by an arginine at position 44 0082. |
| i | PI 644084 (Alpowa/Canadian Red//7*Alpowa) 10429. |
| Varieties | Gehun 0204; Canadian Red 0204; Chiefkan 0204; Yunxianxiaomai 10427. Pinb-D1e is a "loss-of-function" mutation resulting from the replacement of a tryptophan by a stop codon at position 39 0204. |
| i | PI 644085 (Alpowa/Sevier//7*Alpowa) 10429. |
| Varieties | Abyssinia AV12.4 10430; The hard component of Utac0204. Pinb-D1f is a "loss-of-function" mutation resulting from the replacement of a tryptophan by a stop codon at position 44 0204. |
| i | PI 644086 (Alpowa/Andrews//7*Alpowa) 10429. |
| Varieties | Andrews 0204. Pinb-D1g is a "loss-of-function" mutation resulting from the replacement of a cysteine by a stop codon at position 56 0204. |
| dv | Ae. tauschii TA2369 (GenBank AY251983) Pina-D1c, Gsp-D1c 03105; TA2527 (GenBank AY251965) Pina-D1c, Gsp-D1e 03105; TA1649 (GenBank AY251963) PinaD1d, Gsp-D1f 03105; TA10 (GenBank AY649748) 03108; CPI110799 (GenBank AY159804) 10037. |
| dv | Ae. tauschii TA2475 (GenBank AY251989) Pina-D1a, Gsp-D1b 03105; TA2536 (GenBank AY251993) Pina-D1c, Gsp-D1d 03105; TA2374 (GenBank AY251948) PinaD1d, Gsp-D1d 03105; TA2512 (GenBank AY251992) Pina-D1d, Gsp-D1e 03105; TA2455 (GenBank AY251972) Pina-D1d, Gsp-D1f 03105; TA2458 (GenBank AY251986) Pina-D1e, GspD1d 03105; TA2495 (GenBank AY251991) Pina-D1e, Gsp-D1e ; TA2436 (GenBank AY251947) Pina-D1f, Gsp-D1d 03105; Ae. tauschii TA1704 and TA2381 (GenBank AY649747) {03108, 10315}; Ae. tauschii isolate Q03-002 (GenBank DQ257553) (referred to as allele 2) 10314; Ae. tauschii CPI 110799 (GenBank CR626926) 10440. Q03-002, TA1704, and TA2381 were incorrectly assigned Pinb-D1w in the 2006 supplement. |
| dv | Ae. tauschii TA1599 (GenBank AY251962) Pina-D1a, Gsp-D1g 03105; TA1691 (GenBank AY251964) Pina-D1a, Gsp-D1h 03105; Ae. tauschii TA1691 (GenBank AY251946) 03108. |
| dv | Ae. tauschii PI554318 (GenBank AJ302108) Pina-D1d 03104. |
| Varieties | GaoCheng8901 10119. 10208 reported Pinb-D1b in Gaocheng 8901. |
| Varieties | X. aegilotriticum CIGM87.2783-1B-0PR-0B (GenBank AY573901) Pina-D1c 10118. |
| Varieties | X. aegilotriticum CIGM92.1708 (GenBank AY573902) Pina-D1d 10118. |
| Varieties | X. aegilotriticum CIGM93.247 (GenBank AY573903) Pina-D1e 10118. |
| Synonym | Pinb-D1z 10316 |
| Varieties | Dahuangpi (GenBank AY581889) 10316; Nongda 3213 10121; Nongda 3395 10121; Qindao landrace 10305; Qitoubai 10305; Shijiazhuang 34 10305; Zigan 10305. The single nucleotide A deletion occurs in the AAAA at position 210-213 and is assigned to the last position at 213. Homonym: Pinb-D1i(t) 10305. This homonym sequence (allele) was incorrectly assigned Pinb-D1z, 'b3', Pinb-D1u . |
| Sources / synonyms | CS*/Red Egyptian 5D substitution line, Pina-D1k, Gsp-D1i 10077. |
| Varieties | Jingdong 11 (GenBank EF620909) 10313. This allele was used originally (2004 supplement) in combination with Pina-D1k and Gsp-D1i to denote the large deletion that encompasses PINa-D1, PINb-D1, and GSP-D1 10077 (cf. Pins-D1k ). The haplotype nomenclature of this deletion is under review. Pinb-D1q is currently used to denote the C-to-G SNP at position 218 10313. |
| Synonym | Pinb-D1h 10209 |
| Varieties | Hyb65 (NCBI AJ619022) 10209. G insertion: open reading frame shift and premature stop codon; hard kernel texture 10209. |
| Varieties | NI5439 (NCBI AJ619021) 10209. G insertion as in Pinb-D1r and an A-to-G substitution; hard kernel texture 10209. |
| Varieties | Guangtouxianmai (GenBank EF620910) 10208; Hongma10208. G-to-C substitution: Glycine-47 to arginine; hard kernel texture 10208 |
| Varieties | Tiekemai (GenBank EF620911) 10427; 31 hard Yunnan endemic wheats ( T. aestivum ssp. yunnanense King) 10427. Possesses a G deletion at position 127 leading to a shift in ORF 10427. |
The original assignment of this allele in the 2006 supplement was incorrect; the sequence/varieties in {10305] are
Pinb-D1p as listed above for that allele. The following variety/sequence was assigned
PinbD1y in the 2006 supplement; but the original assignment of
10316 is now unchanged.
| Synonym | Pinb-D1q 10316 |
| Varieties | Jing 771 (GenBank AY640304, AB180737) 10316; homonym 'b4' 10316. |
| dv | Ae. tauschii 002 (GenBank DQ257553) 10314; Ae. tauschii ssp. tauschii TA1704 (GenBank AY649747) 10315; Ae. tauschii ssp. anathera TA2381 (GenBank AY649747 10315. This variety/sequence was incorrectly assigned Pinb-D1x in the 2006 supplement; the original assignment of 10316 is now unchanged. |
Ae. tauschii isolate Q03-002 (GenBank DQ257553) (referred to as allele 2)
10314;
Ae. tauschii TA1704 and TA2381 (GenBank AY649747)
10315;
Ae. tauschii CPI 110799 (GenBank CR626926)
10440 were incorrectly assigned this allele in the 2006 supplement; they are
Pinb-D1i as listed above.
| Varieties | Kashibaipi (GenBank AM909618) 10528. |
The original assignment of this allele in the 2006 supplement was incorrect; the sequence for Tachun 3 in
10305 is
Pinb-D1v as listed above. The original assignment of
10316 is now unchanged. Currently there is no assignment for this allele.
This allele/sequence is identical to, and listed under, Pinb-D1p . Currently there is no assignment for this allele.
| Varieties | Changmangtoulongbai (GenBank EF620912) 10391; Hongtutou 1 10391; Hongtutou 2 10391. |
G to A substitution at position 257 and C to T substitution at position 382
10570.
| dv | Ae. speltoides PI 393494 (GenBank AJ302096) 03104; PI 369616 (GenBank AJ302097) 03104; Ae. speltoides spp. speltoides TA2368 (GenBank AY622787), TA1789 (GenBank AY622788) 03108; Ae. speltoides spp. ligustica TA1777 (GenBank AY622789) 03108. |
| dv | Ae. bicornis spp. typica TA1954, TA1942 03108. |
| dv | Ae. longissima spp. longissima TA1912 (GenBank AY622790) 3108; Ae. longissima spp. nova TA1921 (GenBank AY622791) 03108. |
| dv | Ae. searsii TA1837, TA1355 (GenBank AY622792) 03108. |
| dv | Ae. sharonensis TA1999 (GenBank AY622796) 03108. |
Pinb-D1b, Pinb-D1c, Pinb-D1d, Pinb-D1e, Pinb-D1f , or
Pinb-D1g are present in hard hexaploid wheats not carrying the
Pina-D1b (null) mutation {452, 1035, 0082, 0204}.
Wheats with
Pinb-D1b were slightly softer and a little superior to those with
Pina-D1b in milling and bread-making characteristics although there was considerable overlap
0206. Transgenic rice with the
Pina-D1a and
Pinb-D1a alleles possessed softer grain
0207. Genotypes for a selection of North American wheats are given in
0204. In
T. monococcum the gene order was reported to be: tel -
GSP-1 - PINa - PINb {0083, 10122} whereas in
Ae. squarrosa it was: tel -
GSP-1 - PINb- PINa 10037.
The soft kernel trait was transferred to durum
10899. The soft kernel trait was transferred to durum; firstly, to Langdon durum Selection 1-674 and then by backcrossing to cv. Svevo
10899, which was in turn used to develop backcross derivatives in cv. Alzada, Havasu, Kyle, and Strongfield
11444. Genetic evidence indicated that ~24.4 Mbp from CS chromosome 5DS replaced ~20 Mbp of 5BS
11444. Further cytogenetic analysis identified the translocation breakpoint in a 39 bp region within a putative glcosyltransferase gene
11489.
Ikeda et al.
10305 reported a double-null with apparently no
PINa-D1 or
PINb-D1 genes present in
| Chromosome | 1AS |
| Varieties | CS. |
| Marker associations | Distally located: GLO-A1 (distal) – 5.2 cM – GLI-A1 1077. |
| Chromosome | 1BS |
| Varieties | CS. |
| Chromosome | 1DS |
| Varieties | CS. |
| Marker associations | Distally located: GLO-D1 (distal) – 2.9 cM – GLI-D1 1077. |
| Chromosome | 1ES |
| ad | CS/ E. elongata . |
| Chromosome | 1RS |
| ad | CS/Imperial. |
| su | 1B/(1R), eg., Salzmunde 14/44. |
| Note | Null allele. |
| Varieties | Correll 10755; EGA Eagle Rock 10755; Gladius 10755; Yitpi 10755. This allele reduced milling yield by 0.4% 10755. |
| Synonym | Srp5B 10754 |
| Chromosome | 5BL |
SGP-3 See also starch synthase,
| Chromosome | 7AS |
| Varieties | CS. |
| Note | Null allele. |
| Varieties | Norin 61. |
| Chromosome | 7BS |
| Varieties | CS. |
| Note | Null allele. |
| Varieties | Crest. |
| Chromosome | 7DS |
| Varieties | CS. |
A triple null stock (SGP-1 null wheat) is reported in
0137. Deletion mapping indicated that the gene order on the 7S arms is: centromere -
SGP-1 – SGP-3 – Wx 1615.
SSII-1 . Starch synthase II proteins are identical to the starch granule proteins SGP-1
0042
| Chromosome | 7DL |
| Varieties | CS |
| Varieties | Sears' Synthetic IPSR 1190903. |
| Chromosome | 7E |
| ad | CS/ E. elongata . |
| Chromosome | 7H |
| ad | CS/Betzes. |
| Chromosome | 7H |
| ad | CS/ H. chilense . |
| Chromosome | 7S |
| ad | CS/ Ae. sharonensis . |
| Chromosome | 7V |
| ad | CS/ D. villosum . |
| Synonym | Wx-B1a 1054 |
| Varieties | Bao Hua 10989; CS; Hoshuu. |
| Type varieties | Langdon 10989. |
| Varieties | Pakistan Zairaishi selection 10629; QT105 1617; WB6 1617. |
| Type varieties | T. dicoccoides KU 8937B 1616. |
| Type varieties | KU 3659 10629; T. durum KU 3655 and KU 3659 1616. |
| Note | Null allele. |
| Varieties | Turkey-124 10187; Turkey-140 10187; Turkey-171 10187; Turkey-280 10187; Turkey-299 10187. Lines with this allele produce a PCR product with a 173 bp insertion in an exon 10187. |
| Note | Wx-A1' 10587. |
| Varieties | PI 348476 10587; Spelt accessions PI 348576 10587; 2778 Epeautre Noir Velu 10587. |
| Note | Null allele. |
| Type varieties | Buck Topacio 10763. This is probably a unique allele possessing a 1 bp deletion in exon 6 leading to frameshift and a stop codon: partial sequence GQ120523 10763. |
| Varieties | M1 10989. Functional markers for Wx-A1c, Wx-A1d, Wx-A1e and Wx-Ali were developed from DNA sequences 10990. |
| Synonym | Wx-A1 {1054, 1053}, XWx-4B {179, 180}, XWx-4A 961 |
| Chromosome | 4AL |
| Varieties | CS. |
| Type varieties | A variant allele was present in three accessions 03101. A dominant PCR marker for identifying heterozygotes at the Wx-B1 locus is reported in 10732. |
| Synonym | Wx-A1a 1054 |
| Varieties | CS; Joshuu. The complete genomic sequence for Wx-B1a from CS was determined 0073. |
| Varieties | AF24 10629; Chousen 40 0094; Cikotaba {1617, 10629}; Junguk 12 {1617, 10629}. |
| Type varieties | T. durum KU 4213D 1616; KU 4213D 10629; KU 4224C 1616. |
| Type varieties | BG-12413 0111; BG-12415 0111. |
| al | Ae. speltoides 33 10587. |
| al | Ae. longissima 12 10587. |
| Note | Null allele. |
| Varieties | Bai Huo (Baihuomai) 1617; DHWx12 0117. |
| Varieties (alt.) | Mochi-Otome Wx-A1b Wx-B1b 10032. |
| Marker associations | STS marker Xsun1-7D produces a distinct band of about 260 bp (compared with the standard 840 bp), indicative of a smaller PCR product, but the gene is non-functional {0116, 0117}; Xsun4(Wx)-7D is a perfect marker 0118. The complete genomic sequence for Wx-D1a from CS 0073 and the cDNA sequence for the Wx-D1b allele from Bai Huo 0075 were determined. |
| Varieties | K107Wx1 0118; K107Wx2 0118; One Iranian and one Italian accession 03101. |
| Note | Null allele 0117. |
| Varieties | NP150 0117. STS marker Xsun1-7D failed to produce a PCR product {0117 |
| Synonym | Wx-d1e 0234 |
| Varieties | Tanikei A6599-4 0234.Relative to Kanto 107, Tanikei A6599-4 carries an alanine to threonine substitution at position 258 in the mature protein 0234. |
| al | Ae. ventricosa 12 10587. |
Various hard and soft wheats with alleles
Wx-A1b, Wx-B1b and
Wx-D1b are listed in
0304. 15% of Chinese wheats possessed
Wx-B1 null alleles
10357.
Isolation of genomic sequences for the genes encoding granule-bound starch synthase (
GBSSI or
WX ) in
T. monococcum, Ae. speltoides and
Ae. tauschii was reported in
0168. Cloning of a second set of
GBSSI or
waxy genes,
GBSSII , which were shown to be located on chromosomes 2AL, 2B and 2D, was reported in
0167.
GLU-2
| Note | 12 00114. |
| Type varieties | Mexicali. |
| Note | Null 00114. |
| Type varieties | Langdon. GLI-B3 was designated GLU-B2 589 until the name of the locus was changed in 1119. |
| Note | 12* 10215. |
| Type varieties | Alcala la Real 10215. |
| Note | 12.1 11493. |
| Type varieties | T. turgidum ssp. durum Moroccan landrace MGB-3125 11493. |
GLU-3
| Chromosome | 1AS |
| Varieties | CS. The first 7 alleles were distinguished using 5 allele-specific primer sets 10185. Further mainly Australian genotypes with alleles a to f are listed in 10185. In 112 common wheat cultivars from Argentina, 11 microsatellite alleles plus a null allele were found at the GLU-A3 locus 03123. |
| Varieties | Cappelle Desprez, Orca; Suneca10185. |
| Varieties | Halberd 10185; Hope, Insignia. |
| Note | 8[*] +11 02110. |
| Type varieties | Mourisco Fino. |
| Synonym | Glu-A3d' 03116 |
| Varieties | Magistral hexaploid triticale 03116. |
| Synonym | Glu-A3[m] a 10805 |
| dv | PI 190947, T. monococcum ssp. monococcum 10805. |
| Synonym | Glu-A3[m] b 10805 |
| dv | PI 190946, T. monococcum ssp. monococcum 10805. |
| Synonym | Glu-A3[m] c 10805 |
| dv | BGE-020466, T. monococcum ssp. monococcum 10805. |
| Synonym | Glu-A3[m] d 10805 |
| dv | PI 191097, T. monococcum ssp. monococcum 10805. |
| Synonym | Glu-A3[m] e 10805 |
| dv | BGE-013624, T. monococcum ssp. Monococcum 10805. |
| Synonym | Glu-A3[m] f 10805 |
| dv | PI 191094, T. monococcum ssp. monococcum 10805. |
| Synonym | Glu-A[u] 3-I 10806 |
| dv | PI 428139, T. urartu 10806. |
| Synonym | Glu-A[u] 3-II 10806 |
| dv | PI 428327, T. urartu 10806. |
| Synonym | Glu-A[u] 3-III 10806 |
| dv | PI 428340, T. urartu 10806. |
| Synonym | Glu-A[u] 3-IV 10806 |
| dv | PI 428322, T. urartu 10806. |
| Synonym | Glu-A[u] 3-V 10806 |
| dv | PI 428188, T. urartu 10806. |
| Synonym | Glu-A[u] 3- VI 10806 |
| dv | PI 428203, T. urartu 10806. |
| Synonym | Glu-A[u] 3-VII 10806 |
| dv | PI 428255, T. urartu 10806. |
| Synonym | Glu-A[u] 3-VIII 10806 |
| dv | PI 428328, T. urartu 10806. |
| Synonym | Glu-A[u] 3-IX 10806 |
| dv | PI 428256, T. urartu 10806. |
| Synonym | Glu-A[u] 3-X 10806 |
| dv | PI 428217, T. urartu 10806. |
| Synonym | Glu-A[u] 3-XI 10806 |
| dv | PI 428335, T. urartu 10806. |
| Synonym | Glu-A[u] 3-XII 10806 |
| dv | PI 428186, T. urartu 10806. |
| Synonym | Glu-A[u] 3-XIII 10806 |
| dv | PI 428183, T. urartu 10806. |
| Synonym | Glu-A[u] 3-XIV 10806 |
| dv | TRI 11563, T. urartu 10806. |
| Synonym | Glu-A[u] 3-XV 10806 |
| dv | PI 427328, T. urartu 10806. |
| Synonym | Glu-A[u] 3-XVI 10806 |
| dv | PI 428253, T. urartu 10806. |
| Synonym | Glu-A[u] 3-XVII 10806 |
| dv | PI 538735, T. urartu 10806. |
| Synonym | Glu-A[u] 3-XVIII 10806 |
| dv | PI 428225, T. urartu 10806. |
| Synonym | Glu-A[u] 3-XIX 10806 |
| dv | PI 538733, T. urartu 10806. |
| Synonym | Glu-A[u] 3-XX 10806 |
| dv | PI 428196, T. urartu 10806. |
| Synonym | Glu-A[u] 3-XXI 10806 |
| dv | PI 538724, T. urartu 10806. |
| Synonym | Glu-A[u] 3-XXII 10806 |
| dv | PI 428191, T. urartu 10806. |
| Synonym | Glu-A[u] 3-XXIII 10806 |
| dv | TRI 6734, T. urartu 10806. |
| Synonym | Glu-A[u] 3-XXIV 10806 |
| dv | TRI 11496, T. urartu 10806. |
| Note | 6.1 10116. |
| Type varieties | Buck Cristal 10116. The designation of this protein (subunit 6.1) as encoded by GLU-A3 , previously deduced from its electrophoretic mobility 10116, was confirmed through mapping studies 11492. According to 11492, this subunit is equivalent to that designated 7* in 11539. |
| Note | 6+20 11492. |
| Type varieties | T. turgidum ssp. durum landraces BGE047515 and BGE047516 11492; Mexican durum landrace accession 10 (CWI52016) 11490. |
| Note | 6+10+11* 11490. |
| Type varieties | T. turgidum ssp. durum Mexican landrace accession 3 (CWI51941) 11490. |
| Note | 5+11 11492. |
| Type varieties | T. turgidum ssp. turgidum landrace BGE047535 11492; Iranian landrace accession 77 (CWI73342) 11490. |
| Note | 20 11492. |
| Type varieties | T. turgidum ssp. dicoccon landrace BGE047498 11492; T. turgidum ssp. turgidum landrace BGE047531 11492; T. turgidum ssp. durum Moroccan landrace MGB-16563 11493. |
| Note | 5** 11493. |
| Type varieties | T. turgidum ssp. durum Moroccan cv. MGB-20 11493. Glu-A3bd [11492]. 5+22 11492. |
| Type varieties | T. turgidum ssp. turgidum BGE047532 11492. Glu-A3be [11492]. 5* 11492. |
| Type varieties | T. turgidum ssp. turgidum BGE048495 11492. Glu-A3bf [11492]. 5*+20 11492. tv : T. turgidum ssp. turgidum BGE048498 11492. Glu-A3bg [11539]. 5*+11+20 11539. |
| Type varieties | T. turgidum ssp. turgidum BGE018646 11539. Glu-A3bh [11539]. 10 11539. |
| Type varieties | T. turgidum ssp. durum BGE013622 11539. Glu-A3bi [11539]. 5*+11+22 11539. |
| Type varieties | T. turgidum ssp. turgidum BGE013089 11539. Glu-A3bj [11540]. 5* 11540. |
| Type varieties | T. turgidum ssp. durum Fanfarron 11540. Glu-A3bk [11540]. 8* 11540. |
| Type varieties | T. turgidum ssp. durum BGE019300 11540. Glu-A3bl [11540]. 5+8* 11540. |
| Type varieties | T. turgidum ssp. durum BGE013718 11540. |
| Chromosome | 1BS |
| Varieties | CS. Three different approaches were employed to identify putative SNPs used to design gene-specific primers for LMW-GS genes, and six functional STS markers, three for GLU-B3 and three for GLU-D3 10664. These markers distiguished cultivars with different haplotypes at the GLU-B3 and GLU-D3 loci, but there was no clear correlation between the alleles of cultivars defined by protein electrophoretic mobility and the separation patterns of the DNA markers, since all three GLU-3 loci were multiple copies and each protein electrophoretic mobility allele was controlled by 3-6 coding genes 10665. |
| Varieties | Gabo, Timstein, Hope. |
| Varieties | Insignia, Halberd. |
| Varieties | Kharkov, Bungulla. |
| Varieties | Thatcher, Rescue. |
| Note | . |
| Varieties | Kavkaz. Null allele carried by the 1BL.1RS translocation. This allelic designation was originally incorrectly used in the catalogue to name an allele from T. turgidum ssp. durum that was subsequently redesignated as Glu-B3ce , since the Kavkaz allele had precedence. |
| Note | 8+9+13+16+19 02110. |
| Type varieties | ALP-153, Dural, Durati, Edmore; Faisca. |
| Type varieties | Gionp-1954. |
| Synonym | Glu-B3i' 03116 |
| Varieties | Olympus hexaploid triticale 03116. |
| Synonym | Glu-B3k 03116 |
| Varieties | Alamo hexaploid triticale 03116. |
| Synonym | Glu-B3h' 03115 |
| Varieties | Torote hexaploid triticale 03115 |
| Note | 1+3+16 11490. |
| Type varieties | T. turgidum ssp. durum accession 56 (CWI57386) 11490. |
| Note | 1+3+17 11490. |
| Type varieties | T. turgidum ssp. durum accession 74 (CWI71827) 11490. |
| Note | 2+4+16 11490. |
| Type varieties | T. turgidum ssp. durum accession 46 (CWI56913) 11490. |
| Note | 8+9+16 11490. |
| Type varieties | T. turgidum ssp. durum accession 65 (CWI57719) 11490. |
| Note | 2+4+14+18 11490. |
| Type varieties | T. turgidum ssp. durum accession 62 (CWI57615) 11490. |
| Note | 19 11490. |
| Type varieties | T. turgidum ssp. durum accession 77 (CWI73342) 11490. |
| Note | 2+4+6*+15+19 11490. |
| Type varieties | T. turgidum ssp. durum accession 69 (CWI71627) 11490. |
| Note | 2+4+7*+15+16 11490. |
| Type varieties | T. turgidum ssp. durum accession 61 (CWI57614) 11490. |
| Note | 1+3+6*+13’+17 11490. |
| Type varieties | T. turgidum ssp. durum accession 72 (CWI71759) 11490. |
| Note | 8+9+13’+17 11490. |
| Type varieties | T. turgidum ssp. durum accession 58 (CWI57522) 11490. |
| Note | 1+3+8’+17 11490. |
| Type varieties | T. turgidum ssp. durum accession 50 (CWI57256) 11490. |
| Note | 2+4+6*+9’+14+19 11490. |
| Type varieties | T. turgidum ssp. durum accession 78 (CWI73350) 11490. |
| Note | 2+4+8+15+19 11492. |
| Type varieties | T. turgidum ssp. durum landraces BGE045634 11492; MGB-2963 11493. |
| Note | 1+3+7+15+18 11493. |
| Type varieties | T. turgidum ssp. durum landrace MGB-16563 11493. |
| Note | 1+3+8+13+16+19 11493. |
| Type varieties | T. turgidum ssp. durum landrace MGB-3152 11493. |
| Note | 2+4+17 11493. |
| Type varieties | T. turgidum ssp. durum landrace MGB-3125 11493. |
| Note | 2+4+7+15+19 11493. |
| Type varieties | T. turgidum ssp. durum landrace MGB-5963 11493. |
| Note | 9+13+16 11493. |
| Type varieties | T. turgidum ssp. durum landrace MGB-3101 11493. Glu-B3aw [11492]. 1+3+8+13+15+18 11492. |
| Type varieties | T. turgidum ssp. turgidum BGE047502 11492. Glu-B3ax [11492]. 1+3+13*+19 11492. |
| Type varieties | T. turgidum ssp. turgidum BGE047504, BGE047506 11492. Glu-B3ay [11492]. 1+3+14+15 11492. |
| Type varieties | T. turgidum ssp. turgidum BGE047521 11492. Glu-B3az [11492]. 1+16 11492. |
| Type varieties | T. turgidum ssp. dicoccon BGE045645, BGE047503 11492. Glu-B3ba [11492]. 2+4+7+13*+15+19 11492. |
| Type varieties | T. turgidum ssp. durum BGE045651 11492. Glu-B3bb [11492]. 2+4+15 11492. |
| Type varieties | T. turgidum ssp. durum BGE047516 11492. Glu-B3bc [11492]. 2+4+15+17+21 11492. |
| Type varieties | T. turgidum ssp. turgidum BGE048494 11492. Glu-B3bd [11492]. 4+(7**)+13+15+19 11492. |
| Type varieties | T. turgidum ssp. dicoccon BGE045628 11492. |
The designation of subunit 7
as encoded by _Glu-A3_ was deduced from its electrophoretic mobility and awaits confirmation through mapping studies 11492; the subunit was therefore referenced by 11492. _Glu-B3be
_ [11492]. 4+(7)+13+15+21
11492.
| Varieties | Insignia, Cappelle Desprez. |
| Varieties | Jufy-1 10813; Norin-61A. |
| Varieties | India 115 10558. |
| Varieties | Fengmai 27 10804. |
| Chromosome | 1ES |
| su | CS/ E. elongata . |
| Chromosome | 1U |
| su | CS/ Ae. umbellulata . |
A series of papers {00106, 00107, 00108 and 00109} describe considerable variation in primitive wheats not present in bread wheat (A genome species
T. boeoticum, T. urartu, T. thaoudar, T. aegilopoides, T. monococcum , and D-genome species
T. tauschii ) for the low molecular weight subunits, sufficient to use them as a source for potentially changing flour properties in bread wheat.
In
00110, variants for LMW glutenin subunits were reported from study of 24 accessions of einkorn wheat (
T. monococcum ssp.
monococcum ). Nine of these showed two electrophoretic bands for LMW subunits, arbitrarily designated 'a' and 'b', that appeared to be associated with good bread-making quality. The isolation of a new low-molecular-weight glutenin subunit gene, located on chromosome 1D, was reported in
0350.
GLU-4
| Chromosome | 1D |
| su | CS/Langdon 1D(1A); CS/Langdon 1D(1B) 02111. |
| Note | Null allele. |
| Varieties | NI 4. |
GLU-5
| Chromosome | 7D |
| su | CS/Langdon 7D(7A); CS/Langdon 7D(7B) 02111. |
A collection of 173
Ae. tauschii accessions were analysed for low molecular weight glutenin subunits by SDS-PAGE
02112; 33 different patterns for B-subunits and 43 for C-subunits were identified, some of which were of identical electrophoretic mobility to those observed in common wheat. Also observed were subunits with the same mobilities as the D-subunits and as the subunits encoded by the
GLU-D4 and
GLU-D5 loci. This variation represents a source of novel germplasm of potential value for breeding programmes aimed at improving the D-genome of common wheat in the context of bread-making quality.
| Note | Null allele. |
| Varieties | K 68. |
GLI-1
| Varieties | Bezostaya 1, Mercia 988; Tracy 991. |
| Varieties | Dankowska 988; Cabezorro 9985. |
| Varieties | Falchetto 988; Open 991; Touzelle 991. |
| Varieties | Mironovskaya 808, Maris Freeman 988; Arminda 991. Note: An allele Gli-A1f * is mentioned in 03130. |
| Varieties | Saratovskaya 36 988. |
| Varieties | Lutescens 62 988. |
| Varieties | Courtot 991; Skala (heterogeneous) 988; Soissons 991; Spada 9986. |
| Varieties | Marquis 988; Dneprovskaya 521 988; Carat 991; Liocorno 9986. |
| Varieties | Intensivnaya 988. |
| Varieties | Odesskaya 16 (heterogeneous) 988; Oderzo 9986; Cappelle-Desprez 991; Capitole 991. |
| Varieties | Pyrotrix 28 988; Zagore 9981. |
| Varieties | Akmolinka 1 988. |
| Varieties | Ranniaya 73 988; Barbilla 9985. |
Although reported
9986, this allele is omitted because it requires further confirmation
9981.
| Varieties | Jeja del Pais 9985; Milturum 553 9981; Strela 9981. |
| Varieties | Candeal Alcala 9985. |
| Varieties | Japhet 9981; Rouge de Bordeaux 9981. |
| Note | Null allele. |
| Varieties | Saratovskaya 29 (mutant) 9987; E. Mottin 9981. |
| Synonym | Gli-A1[m] a 10805 |
| dv | PI 191146, T. monococcum ssp. monococcum 10805. |
| Synonym | Gli-A1[m] b 10805 |
| dv | PI 190947 T. monococcum ssp. monococcum 10805. |
| Synonym | Gli-A1[m] c 10805 |
| dv | PI 190946, T. monococcum ssp. monococcum 10805. |
| Synonym | Gli-A1[m] d 10805 |
| dv | PI 191097, T. monococcum ssp. monococcum 10805. |
| Synonym | Gli-A1[m] e 10805 |
| dv | BGE-020466, T. monococcum ssp. monococcum 10805. |
| Synonym | Gli-A1[m] f 10805 |
| dv | BGE-013626, T. monococcum ssp. monococcum 10805. |
| Synonym | Gli-A1[m] g 10805 |
| dv | BGE-013628, T. monococcum ssp. monococcum 10805. |
| Synonym | Gli-A[u] 1-I 10811 |
| dv | PI-428333, T. urartu 10811. |
| Synonym | Gli-A[u] 1-II 10811 |
| dv | PI-428319, T. urartu 10811. |
| Synonym | Gli-A[u] 1-III 10811 |
| dv | PI-428335, T. urartu 10811. |
| Synonym | Gli-A[u] 1-IV 10811 |
| dv | PI-428323, T. urartu 10811. |
| Synonym | Gli-A[u] 1-V 10811 |
| dv | PI-428231, T. urartu 10811. |
| Synonym | Gli-A[u] 1-VI 10811 |
| dv | PI-428194, T. urartu 10811. |
| Synonym | Gli-A[u] 1-VII 10811 |
| dv | PI-428256, T. urartu 10811. |
| Synonym | Gli-A[u] 1-VIII 10811 |
| dv | PI-428234, T. urartu 10811. |
| Synonym | Gli-A[u] 1-IX 10811 |
| dv | PI-428320, T. urartu 10811. |
| Synonym | Gli-A[u] 1-X 10811 |
| dv | PI-428255, T. urartu 10811. |
| Synonym | Gli-A[u] 1-XI 10811 |
| dv | PI-428241, T. urartu 10811. |
| Synonym | Gli-A[u] 1-XII 10811 |
| dv | PI-428235, T. urartu 10811. |
| Synonym | Gli-A[u] 1-XIII 10811 |
| dv | PI-428183, T. urartu 10811. |
| Synonym | Gli-A[u] 1-XIV 10811 |
| dv | PI-428317, T. urartu 10811. |
| Synonym | Gli-A[u] 1-XV 10811 |
| dv | PI-427328, T. urartu 10811. |
| Synonym | Gli-A[u] 1-XVI 10811 |
| dv | PI-428327, T. urartu 10811. |
| Synonym | Gli-A[u] 1-XVII 10811 |
| dv | PI-428253, T. urartu 10811. |
| Synonym | Gli-A[u] 1-XVIII 10811 |
| dv | PI-428224, T. urartu 10811. |
| Synonym | Gli-A[u] 1-XIX 10811 |
| dv | PI-538727, T. urartu 10811. |
| Synonym | Gli-A[u] 1-XX 10811 |
| dv | PI-428211, T. urartu 10811. |
| Synonym | Gli-A[u] 1-XXI 10811 |
| dv | PI-538724, T. urartu 10811. |
| Synonym | Gli-A[u] 1-XXII 10811 |
| dv | PI-428191, T. urartu 10811. |
| Synonym | Gli-A[u] 1-XXIII 10811 |
| dv | TRI-6735, T. urartu 10811. |
| Synonym | Gli-A[u] 1-XXIV 10811 |
| dv | TRI-11494, T. urartu 10811. |
| Synonym | Gli-A[u] 1-XXV 10811 |
| dv | TRI-6734, T. urartu 10811. |
| Synonym | Gli-A[u] 1-XXVI 10811 |
| dv | TRI-11496, T. urartu 10811. |
| Synonym | Gld 1B {1415, 1243}, Gld-B4 420, Gld-B2 420, Gld-B6 420, Gld-B5 420, Gld-B3 420, Gld-B1 420 |
| Chromosome | 1BS |
| Chromosome | 1B |
| Sources / synonyms | CS[*] /Cheyenne 634. |
| Varieties | CS 150, 1607. |
| Varieties | Siete Cerros 66 988; Prinqual 991; Loreto 9986. |
| Varieties | Capitole 991; Cappelle-Desprez 991; Dankowska 988; Maris Freeman 988; Mercia 998. |
| Varieties | Ghurka 988; Insignia 988. |
| Varieties | Avrova 9981; Clement 991; Damier 991; Fiocco 9986; Kavkaz 9981. Gli-B1l encodes secalins ssociated with the 1BL.1RS translocation. |
| Varieties | Costantino 9986; Et.d'Choisy 991; Pyrotrix 28 988. |
| Varieties | Intensivnaya 988. |
| Varieties | Inia 66 9985; New Pusa 834 988. |
| Varieties | Jeja del Pais 9985. |
| Varieties | Ardica9981; Barbilla (MCB-1017) 9981. |
| Note | Null allele. |
| Varieties | Touzelle 991; Florence Aurora 9985. Twelve microsatellite alleles plus a null allele were found at the GLI-B1 locus tightly linked to GLU-B3 in 112 bread wheat cultivars from Argentina03123. |
| Varieties | Bezostaya 1 988; Cappelle-Desprez 991; Etoile d'Choisy 991; Galahad 988. |
| Varieties | Skorospelka Uluchshennaya (biotype) {988, 9982}. |
| Varieties | De Carolis 9986; Solo 988. |
| Varieties | Fournil 991; Ghurka 988; Mironovskaya 808 988; Open 991. |
| Varieties | Sadovo I 988; Zlatostrui 9981. |
| Varieties | Insignia 988; Napayo (biotype) 995; San Rafael 9985; Tselinogradka 988. |
| Varieties | Aubain; Chinook 995; Inia 66 9985; Petrel 991; Promin 988. |
| Varieties | Artaban 991; Corin 991; Longbow 988. |
| Varieties | Blanquillo de Toledo (MCB-0950) 9981. |
| Note | Null allele. |
| Varieties | Darius 991; Touzelle 991; Saratovskaya 29 (mutant) 9987. |
| Note | 1Ag[i ] 168. |
| ad | Vilmorin 27/ Th. intermedium . |
| Chromosome | 1ES |
| ad | CS/ E. elongata . |
| Note | 1H[t] p 1037. |
| ad | CS/ E. trachycaulum . |
| Note | 1R[m] S 1340. |
| ad | CS/ S. montanum . |
| Chromosome | 1S |
| ad | CS/ Ae. longissima . |
In barley, the B and C hordeins are controlled by the
HOR2 and
HOR1 loci, respectively, which are linked
1341 on chromosome 1HS {1063, 1153}. The map distances and homology of the proteins indicate that
HOR1 , the locus closest to the centromere, is equivalent to the omega-gliadins (
GLI-1-1 ) in
GLI-1 1338. Three alleles at each of the
GLI-1-1 (omega gliadin) loci were noted
1358. The complexity of the
GLI1 compound loci is further emphasized by a report of individual genes being separable by recombination, where
G1d-1A (a block of gamma and omega genes) is separable by 0.3% from
Gld4-1A (omega gliadins) which is in turn, separable by 1.5% from
Gld3-1A (omega gliadins)
1103.
Variation was described elsewhere
634,
996,
1126 and applied in mapping experiments
107,
196,
422,
1120,
1125,
1243. Sixteen combinations of
GLI-B1 and 4 combinations of
GLI-D1 subunits are listed in
420. Multiple alleles described in
996, number 15 at
GLI-A1 , 18 at
GLI-B1 , and 8 at
GLI-D1 .
The
Gli-1 alleles present in 57 Yugoslav wheat varieties were reported in
994.
| Chromosome | 1DS |
| Varieties | L/18913 (synthetic). |
| dv | Ae. tauschii AUS18913. A locus designated GLI-DT1 controlling an omega-gliadin of Ae. tauschii was mapped on the short arm of chromosome 1D between loci GLI-D1 (strictly GLI-D[t] 1 ) and GLU-D1 (strictly GLU-D[t] 1 ), 13.18 cM proximal to the former and 40.20 cM from the latter 02109. The only omega-gliadin to date identified as being encoded by this locus, namely T1, is of unusually low electrophoretic mobility in SDS-PAGE gels and was formally thought to be a high molecular weight glutenin encoded by the GLU-D[t] 1 locus of Ae. tauschii (see note following the GLU-D1 list in section 'Glutenins'). The authors speculate that, due to their similar relative map positions, the loci GLI-A4, GLI-D4, GLI-R3, GLI-S[l] 4 and this locus, GLI-DT1 , form a series of ' Gli-4 ' orthologous loci. However, this should be interpreted in the light of the above discussion on GLI-A3 and GLI-A4 . |
| Note | T1. |
| Varieties | L/18913 (synthetic). |
| dv | Ae. tauschii AUS18913. |
A 1,200 bp Dra I RFLP was identified as a gene-specific probe for the T1 omega-gliadin
10645.
GLI-2
| Synonym | Gld 6A 1415 |
| Chromosome | 6A |
| Chromosome | 6AS |
| Varieties | CS. |
| Varieties | Dneprovskaya 521 988; Kenyon (biobype) 995; Mocho Sobarriba 9985. |
| Varieties | Krasnodonka 988; Lesostepka 75 988. |
| Varieties | Chamorro 9985; Champlein 991; Longbow 988. |
| Varieties | Mironovskaya 808 988. |
| Varieties | Candeal Alcala 9985; Montcada 9985; Saratovskaya 39 988. |
| Varieties | Saratovskaya 36 998. |
| Varieties | Aragon 03 9985; Kirgizskaya Yubileinaya 988; Saunders 995; Titien 991. |
| Varieties | Bezenchukskaya 98 (biotype) 988. |
| Varieties | Gentil Rosso 202 9981; PI 191245 9981. |
| Varieties | Navarro 122 9985. |
| Varieties | Navarro 150 9985. |
| Varieties | Blanquillo de Barcarrota (MCB-0893) 9981. |
| Varieties | Hembrilla Soria (MCB-1298) 9981. |
| Varieties | Candeal de S.Lorenzo Parrilla (MCB-0932) 9981. |
| Varieties | Barbilla de Leon (MCB-1292) 9981. |
| Varieties | Candeal de Nava del Rey (MCB-0892) 9981. |
| Varieties | Blanquillo (MCB-0908) 9981. |
| Note | Null allele. |
| Varieties | Saratovskaya 29 (mutant)9987. |
| Synonym | Gli-A2[m] a 10805 |
| dv | BGE-013630, T. monococcum ssp. monococcum 10805. |
| Synonym | Gli-A2[m] b 10805 |
| dv | PI 094740, T. monococcum ssp. monococcum 10805. |
| Synonym | Gli-A2[m] c 10805 |
| dv | PI 190942, T. monococcum ssp. monococcum 10805. |
| Synonym | Gli-A2[m] d 10805 |
| dv | PI 190947, T. monococcum ssp. monococcum 10805. |
| Synonym | Gli-A2[m] e 10805 |
| dv | PI 190946, T. monococcum ssp. monococcum 10805. |
| Synonym | Gli-A2[m] f 10805 |
| dv | BGE-013626, T. monococcum ssp. monococcum 10805. |
| Synonym | Gli-A2[m] g 10805 |
| dv | PI 191095, T. monococcum ssp. monococcum 10805. |
| Synonym | Gli-A2[m] h 10805 |
| dv | BGE-001937, T. monococcum ssp. monococcum 10805. |
| Synonym | Gli-A2[m] i 10805 |
| dv | PI 191096, T. monococcum ssp. monococcum 10805. |
| Synonym | Gli-A2[m] j 10805 |
| dv | BGE-020466, T. monococcum ssp. monococcum 10805. |
| Synonym | Gli-A2[m] k 10805 |
| dv | BGE-001937, T. monococcum ssp. monococcum 10805. |
| Synonym | Gli-A2[m] l 10805 |
| dv | BGE-029108, T. monococcum ssp. monococcum 10805. |
| Synonym | Gli-A2[m] m 10805 |
| dv | BGE-013627, T. monococcum ssp. monococcum 10805. |
| Synonym | Gli-A2[m] n 10805 |
| dv | BGE-001937, T. monococcum ssp. monococcum 10805. |
| Synonym | Gli-A[u] 2-I 10811 |
| dv | PI-428333, T. urartu 10811. |
| Synonym | Gli-A[u] 2-II 10811 |
| dv | PI-428320, T. urartu 10811. |
| Synonym | Gli-A[u] 2-II 10811 |
| dv | PI-428230, T. urartu 10811. |
| Synonym | Gli-A[u] 2-IV 10811 |
| dv | PI-428319, T. urartu 10811. |
| Synonym | Gli-A[u] 2-V 10811 |
| dv | PI-428239, T. urartu 10811. |
| Synonym | Gli-A[u] 2-VI 10811 |
| dv | PI-428336, T. urartu 10811. |
| Synonym | Gli-A[u] 2-VII 10811 |
| dv | PI-428235, T. urartu 10811. |
| Synonym | Gli-A[u] 2-VIII 10811 |
| dv | PI-428234, T. urartu 10811. |
| Synonym | Gli-A[u] 2-IX 10811 |
| dv | PI-428183, T. urartu 10811. |
| Synonym | Gli-A[u] 2-X 10811 |
| dv | PI-428256, T. urartu 10811. |
| Synonym | Gli-A[u] 2-XI 10811 |
| dv | PI-428255, T. urartu 10811. |
| Synonym | Gli-A[u] 2-XII 10811 |
| dv | PI-428224, T. urartu 10811. |
| Synonym | Gli-A[u] 2-XIII 10811 |
| dv | PI-428208, T. urartu 10811. |
| Synonym | Gli-A[u] 2-XIV 10811 |
| dv | PI-428202, T. urartu 10811. ] |
| Synonym | Gli-A[u] 2-XV 10811 |
| dv | PI-428217, T. urartu 10811. |
| Synonym | Gli-A[u] 2-XVI 10811 |
| dv | PI-427328, T. urartu 10811. |
| Synonym | Gli-A[u] 2-XVII 10811 |
| dv | PI-428317, T. urartu 10811. |
| Synonym | Gli-A[u] 2-XVIII 10811 |
| dv | PI-428253, T. urartu 10811. |
| Synonym | Gli-A[u] 2-XIX 10811 |
| dv | PI-538742, T. urartu 10811. |
| Synonym | Gli-A[u] 2-XX 10811 |
| dv | PI-428232, T. urartu 10811. |
| Synonym | Gli-A[u] 2-XXI 10811 |
| dv | PI-428188, T. urartu 10811. |
| Synonym | Gli-A[u] 2-XXII 10811 |
| dv | PI-428244, T. urartu 10811. |
| Synonym | Gli-A[u] 2-XXIII 10811 |
| dv | PI-538733, T. urartu 10811. |
| Synonym | Gli-A[u] 2-XXIV 10811 |
| dv | PI-428212, T. urartu 10811. |
| Synonym | Gli-A[u] 2-XXV 10811 |
| dv | TRI-6734, T. urartu 10811. |
| Synonym | Gli-A[u] 2-XXVI 10811 |
| dv | PI-428254, T. urartu 10811. |
| Synonym | Gld 6B 1415 |
| Chromosome | 6BS |
| Chromosome | 6B |
| Varieties | CS. |
| Varieties | Akmolinka 1 988; Cesar 9981; Friedland 991; Tselinnaya 20 988. |
| Varieties | Arsenal 991; Veronese 9986; Zlatna Dolina 994. |
| Varieties | Basalt 9981; Maris Freeman 988; Master 991. |
| Varieties | Capitole 991; Capelle-Desprez 991; Galahad 988; Forlani 9986. |
| Varieties | Farnese 9986; Funo R250 9986; Novosadska Rana 1 994. |
| Varieties | Clement 991; Longbow 988; Tracy 991. |
| Varieties | Mironovskaya 808988; Open 991; Renan991. |
| Varieties | Saratovskaya 39 988. |
| Varieties | Arminda 991; Estica 991; Genial 991. |
| Varieties | Aquila 9981; Saratovskaya 36 988. |
| Varieties | Tselinogradka 988. |
| Varieties | Kirgizskaya Yubileinaya 988. |
| Varieties | Super Zlatna (biotype) 994; Prostor 9981; 251/83 9981. |
| Varieties | Centauro 9986; E. Morandi 9986. |
| Varieties | Champion 991; Chopin 991. |
| Varieties | Priam 991; Etoile d'Choisy 991; Campeador 9985; Krajinka (biotype) 994. |
| Varieties | Montjuich 9985; Mocho Sobarriba 9985. |
| Varieties | Jeja del Pais 9985; Barbilla de Leon (MCB-1292) 9981. |
| Varieties | Rojo de Humanes (MCB-1262) 9981; Grano de Miracolo 9981. |
| Varieties | Blanquillo (MCB-0908) 9981. |
| Varieties | Negrete de Malaga (MCB-1754) 9981. |
| Varieties | Strela 9981; Sredneuralskaya 9981. |
| Note | Null allele. |
| Varieties | Saratovskaya 29 9987. |
| Synonym | Gld 6D 1415 |
| Chromosome | 6DS |
| Chromosome | 6D |
| Varieties | CS. |
| Varieties | Bezostaya 1 988; Cobra 991; Farnese 9986; Partizanka 994. |
| Varieties | Dneprovskaya 521 988. |
| Varieties | Creneau 991; Kirgizskaya Yubileinaya 988; Rempart991. |
| Varieties | Crvencapa 944; Kzyl-Bas 988; Skala 988. Gli-D2l. Omitted. No reliable differences compared to existing alleles 9981. |
| Varieties | Omskaya 12 988. Cultivars Salmone and Resistente, which carry Gli-D2aa 9981, were erroneously given as standards for allele Gli-D2o in 9986. |
| Varieties | Akmolinka 1 988; Bezenchukskaya 98 988; Selkirk (biotype) 995. |
| Varieties | Epiroux 991; Arbon 991. |
| Varieties | Montjuich 9985; Blanquillo9985. |
| Varieties | Candeal Alcala 9985. |
| Varieties | Rojo de Boadilla de Campos (MCB-1031) 9981. |
| Varieties | Hembrilla Soria (MCB-1298) 9981. |
| Note | Null allele. |
| Varieties | Saratovskaya 29 (mutant) {9987 |
GLI-2 alleles were determined in
57 Yugoslav wheat varieties
994.
| Note | 6Ag[i ] 374. |
| ad | Vilmorin 27/ Th. intermedium . |
GLI-R
| Note | d1 03116. |
| Varieties | Carnac hexaploid triticale 03116. |
| Note | d2 03116. |
| Varieties | Mostral hexaploid triticale 03116. |
| Note | t1 03116. |
| Varieties | Alamo hexaploid triticale 03116. |
| Note | Null 03116. |
| Varieties | Triticor hexaploid triticale 03116. |
| Note | t2 03115. |
| Varieties | Tornado hexaploid triticale 03115. |
| Chromosome | 6R |
| ad | CS/ S. montanum . The location of Gli-R2 in S. cereale is thought to have evolved from S. montanum 1339 via a translocation between 2R and 6R 1530. |
ad,su: CS/ Ae. longissima .
| Chromosome | 6U |
| ad | CS/ Ae. umbellulata |
| Chromosome | 6VS |
| ad | Creso/ D. villosum . |
GLI-3
| Synonym | Gld-2-1A 1416 |
| Chromosome | 1AS |
| Varieties | Bezostaya 1. Each of the following GLI-A3 alleles, apart from Gli-A3d , which is a null, controls one minor omegagliadin with molecular mass about 41k that occurs in the middle of the omega-region of APAGE fractionation. Gliadins controlled by these alleles differ in electrophoretic mobility in APAGE in that the fastest of three known GLI-A3 -gliadins is controlled by Gli-A3a and the slowest by Gli-A3c 9983. |
| Varieties | CS, Prinqual, Courtot, Tselinogradka, Bezenchukskaya 98. |
| Note | Null 9983. |
| Varieties | Saratovskaya 210, Kharkovskaya 6, Richelle. |
| Varieties | Sicco. Gli-B3c 1119, 422. |
| Sources / synonyms | CS[*] /Thatcher1B. |
| Chromosome | 1RS |
| al | Four inbred lines (R2, J14, 8t, E2666). |
| Note | 1S[1] S 1228. ad,su: CS/ Ae. longissima . |
| Marker associations | In Ae. longissima 2/Ae. longissima 10 , three gliadin loci, one glucose phosphate isomerase, and two glutenin loci were mapped relative to one another 1228 as follows: GLU-S[l] 1 – 15.9 cM – GPI-S[l] 1 – 38 cM – GLI-S[l] 4 – 7.1 cM – GLU-S[l] 3 – 0.9 cM – GLI-S[l] 1 – 5.6 cM – GLI-S[l] 5. GLU-S[l] 1 is located in 1S[l] L and the other loci are in 1S[l] S. |
| Chromosome | 4VL |
| ad | Creso/ D. villosum . |
GLI-5
| Chromosome | 1AS |
| Varieties | Salmone. |
| Note | Null 9983. |
| Varieties | CS. |
Allele
Gli-A5b controls two slow-moving, easily-recognizable omega-gliadins. It is present in all common wheat cultivars having alleles
Gli-A1m and
Gli-A1r (and, probably, in those having
Gli-A1e ,
Gli-A1l and
Gli-A1q ), because earlier (for example, in
988) two minor omega-gliadins encoded by
Gli-A5b were considered controlled by these
GLI-A1 alleles
9983
| Chromosome | 1BS |
| Varieties | Salmone. |
In
988, omega-gliadins controlled by
GLI-B5 (allele
Gli-B5b ) were attributed to alleles at the
GLI-B1 locus (alleles
Gli-B1c, i, k, m, n and
o ).
GLI-6
| Note | Null 9983. |
| Varieties | CS; Bezostaya 1. |
| Varieties | Bezenchukskaya 98. |
| Varieties | Courtot, Anda, Mironovskaya 808. |
GLI-7
| Chromosome | 1DS |
| dv | AUS18913 10547. |
The gamma-gliadin encoded by this locus co-segregated with the T1 omega-gliadin encoded by the
GLID[t] T1 locus (currently included in the Catalogue as locus (
GLI-DT1 ).
GLI-A7 was located 0.69 cM from
GLI-D[t] 1 10547.
Inhibitors (dimeric) of heterologous alpha-amylase
| Chromosome | 3BS |
| Varieties | CS 1260. |
IHA-B1.2 .
| Chromosome | 3BS |
| Varieties | CS {0124, 0125}. |
| Note | Null allele. |
| Varieties | Cadoux 0125; Cranbrook 0125; Tasman 0125. |
| Chromosome | 3DS |
| Varieties | CS 1260. |
Subtilisin inhibition
| Chromosome | 2RS |
| Chromosome | 2R |
| ad | CS/Imperial, Holdfast/King II. |
| Synonym | Isa 1 528 |
| Chromosome | 2H |
| ad | CS/Betzes. |
SI-2
| Chromosome | 1BS |
| su | Bersee (Koga II). |
| Chromosome | 1DS |
| Varieties | Koga II. |
| Synonym | Ica 2 528, Ica 1 528 |
| Chromosome | 1H |
| ad | CS/Betzes. |
| Chromosome | 1RS |
| Chromosome | 1R |
| ad | CS/Imperial 529. |
| tr | Gabo 1BL.1RS 701. |
| Chromosome | 1S |
| ad | CS/ Ae. longissima . |
| Chromosome | 1U |
| ad | CS/ Ae. umbellulata . Considerable genetic variation for Si-2 was noted in 701. A chromosome location for Si-H2 on 1HL was inferred in 528 but questioned in 701. Three subunits of the wheat tetrameric inhibitor of insect a-amylase, CM1, CM3 and CM16, with homology to the dimeric and monomeric a-amylase inhibitors and the trypsin inhibitors, were located by Southern analysis of cDNAs pCT1, pCT2, and pCT3 to 4A, 4B, 4D; 7A, 7B, 7D; and 4A, 4B, 4D, respectively 427. |
Genes encoding proteins which inhibit the action of mammalian and insect, but not cereal, a-amylases, were located in chromosomes 3BS, 3DS and 6DS of Chinese Spring
1260. Also, genes encoding inhibitors of insect a-amylases were in
H. chilense chromosomes 4H[ch] and 7H[ch]
1262.
TI-1
| Synonym | Itc 1 528 |
| Chromosome | 3H |
| ad | CS/Betzes. |
| Chromosome | 3R |
| ad | CS/Imperial. |
TI-2
| Chromosome | 5AL |
| Varieties | CS. |
| Chromosome | 5BL |
| Varieties | CS. |
| Chromosome | 5DL |
| Varieties | CS. |
| Note | 5Ag[i ] 699. |
| ad | Vilmorin 27/ Th. intermedium . |
| Chromosome | 5M |
| ad | CS/ Ae. mutica . |
| Chromosome | 5RL |
| ad | CS/Imperial. |
| su | CS/King II. |
| Note | 5S[l] L 699. |
| ad | CS/ Ae. sharonensis . |
| Chromosome | 1U |
| ad | CS/ Ae. umbellulata . |
SPA-1
| Chromosome | 1AL |
| Varieties | Recital 10909. |
| Chromosome | 1BL |
| Varieties | Recital10908. |
| Marker associations | Glu-B1 - 1.3 cM - Spa-B1 10909. |
| Varieties | Chinese Spring 10909; Recital 10908; Australian genotypes listed in 10908. |
| Varieties | Renan 10909; Australian genotypes listed in 10908. |
| Chromosome | 1DL |
| Varieties | Recital 10909. |
After testing an ealier hypothesis that SPA genes affected wheat quality, analyses conducted by both
10908 and
10909 obtained no evidence supporting a significant effect and attributed any variation to the closely linked
GLU-B1 locus.
