3. Pathogenic Disease/Pest Reaction⌂ Home
3.1. Abiotic Stress Responses: Dehydrin-response Element Binding Factors⌂ Home
DREB proteins are a large family of transcription factors induced by abiotic stresses. Using genomespecific primers as probes for an orthologous Dreb1 gene series was placed on chromosomes 3A, 3B and 3D 10729. SNPs in DREB-B1 permitted mapping in chromosome 3BL in the ITMI (Opata 85 / W7984) mapping population. See also section 2.2.42.
DREB A1 . 3A 10729.
| Chromosome | 3BL |
| Marker associations | Xmwg818-3B – 27.3 cM – Dreb-B1 – 11.2 cM – Xfbb117-3B 10729. |
3.2. Reaction to Barley Yellow Dwarf Virus⌂ Home
Disease: Barley yellow dwarf; Cereal yellow dwarf
BDV1
| Chromosome | 7D |
| Chromosome | 7DS |
| i | Jupeteco 73R (compared to Jupeteco 73S) 1363. |
| Varieties | Anza 1379; Condor BW3991 1379; Tyrant BW3872 1379; Hahn BW4097 1379; Parrot BW108171379; Siren BW18643 1379; Many CIMMYT genotypes. Bdv1 is completely linked with Ltn , Sr57 , Lr34 and Yr18 . See Ltn , Lr34 , Yr18 . |
Note: BW = CIMMYT wheat accession number.
BDV2
| Note | Derived from Th. intermedium 7D = T7DS-7Ai# |
| Chromosome | 1S |
7Ai#1L group.7DL = T7DS.7DL7Ai#1L
0182,
552.
BDV3
| Note | Derived from Th. intermedium cv. Ohahe 10158 |
| Chromosome | 7DS |
3.3. Reaction to Bipolaris sorokiniana⌂ Home
Diseases: Spot blotch and common root rot. Spot blotch
The pathogen harbours Tox A in common with Parastagonospora nodurum , Parastagonospora avenaria tritici and Pyrenophora tritici-repentis {11255, 11768}.
SB1
| Note | Partial resistance |
| Chromosome | 7DS |
| i | HUW234Ltn+ 10855. |
| Varieties | Saar 10856; Lines with Lr34/Yr18/Pm38/Sr57 - see Reaction to Puccinia triticina , Reaction to Puccinia striiformis , Reaction to Blumeria graminis , Reaction to Puccinia graminis , Leaf tip necrosis. |
| Marker associations | Pleiotropic or closely linked with Lr34/Yr18/Pm38/Sr57 located between Xgwm1220-7DS and Xswm10-7DS (1.0 cM interval) 10856; see also Reaction to Puccinia triticina , Reaction to Puccinia striiformis , Reaction to Puccinia graminis and Reaction to Blumeria graminis . |
| c | Putative ABC transporter 10648. |
SB2
| Note | QSb.bhu-5B 11255. |
| Chromosome | 5BL |
| Chromosome bin | 5BL1-0.55-0.75. |
| Varieties | Ning 8201 11255; Yangmai 6 11255; YS116 11255. |
| Marker associations | Xgwm639-5B – 1.4 cM – Sb2 – 0.06 cM – Xgwm1043-5B 11255. |
SB3
| Chromosome | 3BS |
| Chromosome bin | 3BS8-0.78 -1.00. |
| Varieties | Line 621-7-1 11256. |
| Marker associations | Sb3/XWGGC3959 were mapped to a 2.2 cM interval between Xbarc133/Xbarc147/Xcfp30-3B/XWGGC5911 and XWGGC4320 11255; XWGGC12798 – 0.08 cM – SB3XW GGC9893/XWGGC10235 – 0.07 cM – XWGGC6119 11255. |
SB4
| Chromosome | 4BL |
| Varieties | Line 7H9094 11592. |
| Marker associations | YK12831 – 1.18 cM – SB4/YK12828 – 0.01 cM – YK13104 11592. Line 7H909 was selected from a segregating F4 line from a cross of resistant cultivars GY17 and Zhongyu 1211 11592. |
QTL
Yangmai 6 (R)/Sonalika (S): RIL population: AUDPC was controlled by four QTLs derived from Yangmai 6, viz.
QSb.bhu-2AL (
Xbarc353-2A –
Xgwm445-2A , R[2] =0.148),
QSb.bhu-2BS (
Xgwm148-2B –
Xgwm375-2B , R[2] =0.205),
QSb.bhu-5BL (
Xgwm67-5BL –
Xgwm371-5BL , R[2] =0.386) and
QSb.bhu-6DL (
Xbarc173-6D –
Xgwm732-6DL , R[2] =0.225)
10719.
3.4. Reaction to Blumeria graminis DC.⌂ Home
Disease: Powdery Mildew.
Resistance genes and their molecular associations are reviewed in 10141.
PM1
| Synonym | Mla 348, Pm1 130, Mlt 1175 |
| Chromosome | 7AL |
| Chromosome | 7A |
| i | Axminster/8[*] Chancellor 132; CI 14114 = As II/8[*] Chancellor 132; CI 13836/8[*] Chancellor 132; Kenya C6041/5[*] Federation 1168; Norka/8[*] Chancellor 132. |
| Sources / synonyms | CS[*] 5/Axminster 7A 1293. |
| Varieties | Anfield 98; As II 130; Axminster 1175,130; Birdproof 165; Bonus 1554; CI 13836 130; Converse 1175; Fedka |
| Synonym | Pm18 853, 562 |
| Varieties | Blaukorn 0011; M1N 562,1628; M1N was described as an undesignated subline of Weihenstephan M1540. |
| Marker associations | AFLP marker 18M2 was diagnostic for Pm1c 0011. |
| Varieties | T. spelta var duhamelianum TRI2258 562. |
| Marker associations | AFLP marker 18M1 – various Pm1 alleles 0.9 cM 0011. |
**PM2** TraesCS5D01G044600 11503.
| Note | Putatively derived from Agropryron cristatum |
| Synonym | PmPB3558 11049, PmKM2939 11049 |
| Chromosome bin | C-5DS1-0-0.63. |
| Varieties | KM2939 11049; PB355811075. |
| Marker associations | Xscar112 – 0.5 cM – Pm2b – 1.3 cM – Xscar203/Xmag6176/Xcfd81-5D 11049; Xcfd81-5D – 5.5 cM – PmPB3558 – 3.9 cM – Xbwm25 – 0.9 cM – Xbwm21 – 0.9 cM – Xbwm20 11075. Deleted : Identified as Pm2a 11503. |
| Synonym | PmNM 11061 |
| Chromosome | 5DS |
| Chromosome bin | 5DS-1-0-0.63. |
| Varieties | Niaomai 11061. |
| Marker associations | Xcfd81-5D – 0.4/0.1 cM – Pm2c – 7.5/4.9 cM – Xcfd78-5D 11061. |
| Deleted | Identified as Pm2a 11503. |
Several alleles of
Pm2 with wheat and alien origins have been reported in Chinese genotypes – see temporary designations. The complex nature of temporarily named powdery mildew resistance genes in the
Pm2 region is discussed in
11380. Several alleged alleles at the
Pm2 locus are likely
Pm2a 11503.
| Note | PM3 has 92.9% identity with PM8 at the protein level 11398.
Pm3a 130, 132. |
| Synonym | Mla 1168 |
| Chromosome | 1A |
| Varieties | Sydney University Accession W150 = AUS 6449 {939, 1628}. |
| Varieties (alt.) | Cortez Pm5 allele 10843. |
| Marker associations | Pm3e – 7.1 cM – Xwmc818-1A 10843. |
| i | Michigan Amber/8[*] Chancellor 1628; This allele was distinguished from Pm3c with only one of 13 pathogen cultures. |
| Varieties | Viza 10843. |
| c | Sequence DQ071554 10292. |
| Synonym | Mlar 854 |
| Chromosome | 1AS |
| Chromosome | 1A |
| Varieties | Avo1629; Aristide1629; Champetre 0313; Courtot 1629; Lutin 0313; Oradian 0313; Rubens 0313; Soissons 0313; Valois 0313. |
| Marker associations | Pm3g – 5.2 cM – Gli-A5 – 1.9 cM – Gli-A1 0070; Pm3g was completely linked to microsatellite Xpsp2999 313. |
| c | Sequence DQ251489, DQ517919 10405. |
The
Pm3a, Pm3b, Pm3d and
Pm3f alleles form a true allelic series based on sequence analysis
10292. Following the cloning and sequencing of
Pm3b 10064, 6 other alleles were sequenced
10405. The Chinese Spring (susceptible) allele,
Pm3CS , considered to be ancestral and present in many hexaploid and tetraploid wheats, was also transcribed {10405, 10406}. Other wheats possessed a truncated sequence (e.g. Kavkaz), or were null
10405,
10406. Unique markers were developed for all 8 transcribed alleles, and for individual alleles
10405.
Alleles
Pm3b, Pm3d , and
Pm3f were detected in Scandinavian varieties using allele-specific markers
10681.
TraesSYM2A03G00828360 11774.
| Synonym | Pm4 131 |
| Chromosome | 2AL |
| i | CI 14123 = Khapli/8[*] Chancellor 131; CI 14124 = Yuma/8[*] Chancellor 131. |
| Varieties | Aikang 58 11753; Steinwedel[*] 2/Khapli 939; Yangmai 10 10176; Yangmai 11 10176. |
| Type varieties | Khapli 131; Valgerado 97; Yuma 131. |
| Marker associations | Co-seg with Xbcd12312A.2 & Xcdo678-2A using F2s864; Xbcd1231-2A.1 – 1.5 cM – Pm4 – 1.56 cM – Xbcd292-2A 864; Pm4a – 3.5 cM – AFLP markers 4aM1 and 4aM2 11; Xbcd1231-2A was converted to a STS marker and to a Pm4a -specific dominant PCR marker 10176; Xgwm356-2A – 4.8 cM – Pm4a 10176. |
| c | Similar structure to Pm4b 11525. |
| Note | [ Pm23 1618] 2AL 10583 – earlier reported on |
| Chromosome | 5AL |
| Varieties (alt.) | 81-7241 Pm8 suppressed{1618, 10583}. |
| Marker associations | Xbarc122-2 – 1.4 cM – Pm4c – 3.5 cM – Xgwm356-2 10583. Pm4b and Pm4c are identical at the nucleotide level 11774. |
| Chromosome | 2AL |
| Chromosome bin | 2AL1-0.85-1.00. |
| Varieties | GR18-1 11701; SYMattis {11525, 11775};. Tianmin 668 11702; Tm27d2 = WW St2022/Tm27//Amor = TRI 29584 10744. |
| dv | T. monococcum Tm27 10744. v: ma: A 218 bp fragment was amplified with STS marker ResPm4 as were other Pm4 alleles 10744, Located within the intervals 75.889 – 78.702 Mb 11701 and 76.148 – 76.803 11702.. |
| Chromosome | 2AL |
| Varieties | D29 11317. |
| Marker associations | Xgdm93-2A – 4.9 cM – Pm4e/Xstsbcd1231 – 1.8 cM – Xhbg327-2A 113017; Xwgrc763-2A – 0.13 cM – Pm4e/Xwgrc872-2A/Xwgrc869-2A – 0.58 cM – Xwgrc982-2A , a region of about 6.1 Mb 11335. Pm4d and Pm4e_ are identical at the nucleotide level 11774. |
A recessive resistance gene (
pmXXM 11661) in Xiaomaomai had a similar protein structure to
Pm4d ,
Pm4e and
Pm4h 11661.
Pm4f . v: WATDE0571
11775.
Pm4g . v: WW-740
11775.
Pm4h . v: WW-474
11774.
Pm4i . v: WATDE0048
11775.
Pm4j . v: WATDE0592
11775.
Add note at end of
Pm4 section: Some variants of
PM4 confer resistance to wheat blast {11632, 11735, 11775} – see Reaction to
Magnaporthe grisea .
TraesCS7B02G441700 (susceptible allele) (chr7B: 706.811-706.816 Mb)
11533.
| Note | Pm5a was transferred to hexaploid wheat from T. dicoccum via Hope and H-44. Recessive. |
| Synonym | Pm5 787, mlH 771 |
| Chromosome | 7B |
| Chromosome | 7BL |
| i | Hope/8[*] Chancellor = CI 14125570. |
| Sources / synonyms | CS[*] 6/Hope 7B 964, 771. |
| Varieties | Alidos 854; Aotea 964; Caldwell 786; Ga 1123 786; Galaxie 0257; Glenwari 964; Hardired 786; Hope 964; H-44 964; Kontrast 854; Kormoran 1079; Kutulukskaya 257; Lambros 0257; Lawrence 964; Navid 0257; Pagode 0257; Redcoat 97; Redman 964; Regina 0257; Renown 964; Selpek 540; Sicco 96, 0257; Spica 964; Tarasque0257; Warigo 964; Zolotistaya 0257. |
| Varieties (alt.) | Arthur Pm6 786; Coker 983 Pm6 786; Double Crop Pm6 786; Granada Pm8 541; Saar Pm38 Pm39 10481; Sensor Pm8 541. |
| c | GenBank MK955160. |
| Synonym | Mli 558, 540 |
| Varieties | Aquila{96, 541}; Carimulti 541; Cariplus 541; Cucurova 0257; Dolomit 541; Falke 541; Flanders 96; Fruhprobst 0257; Ilona 0257; Ibis 96; Kirkpinar-79 0257; Kontrast 0257; Kormoran 541; Krata 541; Markant 541; Mercia 1531; Milan 541; Nadadores 0257; Reiher 541; Rektor541; Rothwell Perdix 96; Siete Cerros 0257; Severin 541; Sicco 96; Sperber 541; Tukan 541; Una 0257; Urban 541; Wattines 541; Wettiness 0257. |
| Varieties (alt.) | Bert Pm6 541; Boxer Pm4b 541; Crossbow Pm2 Pm6 98; Kristall Pm8 541; Mission Pm4b {1531, 541}; Parade Pm2 Pm6 1531. |
| c | GenBank MK955159. |
| Chromosome | 7B |
| Varieties | T. sphaerococcum cv. Kolandi 0257. |
| Chromosome | 7B |
| Chromosome bin | 7BL 0.86-1.00 10542. |
| i | IGV 1-455 = CI 10904/7[*] Prins 0257; CI 10904/7[*] Starke 0257. |
| Varieties | Dream 10542. |
| Marker associations | Xgwm611-7B – 2.1 cM – Pm5d – 2.0 cM – Xgwm577-7B – 1.0 cM – Xwmc581-7B 10542. c Same sequence as Pm5e 11533. |
| Note | Recessive and hemizygous effective 0258; usually dominant 11708. [ mlfz 0259]; PmAL11 11708. |
| i | H962R {11707). |
| Varieties | AL11 11708. Baiyouyantiao (previously published as PmBYYT 11533); Fuzhuang 30 0258; Hongquanmong (previously published as PmH 11533; Mazhamai (previously published as Mlmz 11533); Tangmai 4 (previously published as PmTm4 {11533, 10961, 11533}); Xiaobaidongmai (previously published as Pmxbd {0258, 11533}). |
| Marker associations | Xgwm1267-7B – 6.6 cM – Pm5e – 12.6 cM – Xubc405 628 -2B 0258. KASP marker AL11-K2488 11708. |
| c | Identified as a CC-NBS-LRR 11533. GenBank MK955156. |
Although Duanganmang (
PmDGM ) had an identical sequence and UTR to
Pm5e , a second completely linked gene was postulated to account for a different response pattern to the
Pm5e control
11705.
pm5.
PM6
| Synonym | Mlf 626 |
| Chromosome | 2B |
| i | CI 13250/7[*] Prins 0069; CI 12559/8[*] Prins 0069; Eight Prins derivatives 10576; PI 170914/7[*] Prins 6 NILs based on Prins {0139, 0069}. |
| Varieties | 1969 IVGS Line |
C
626; Abe
97,
1256; Coker747 {786, 1079}; Mengavi
97; Oasis
786; Timgalen
98; TP 114/2[*] Starke deriv. B
626.
PM7
| Note | Derived from S. cereale cv. Rosen. 4BL 270, 271, 389 = T |
| Chromosome | 4BS |
4BL-5RL
543, but more recently revised to T4BS.4BL-2R#IL
389,
380.
PM8
| Note | Derived from Petkus rye - see Yr9, Lr26, Sr31 . |
| Chromosome | 1BL |
| Chromosome | 1RS |
1R(1B).
PM9
| Chromosome | 7AL |
| Chromosome | 7A |
| Varieties | N14 562. |
| Varieties (alt.) | Anfield Pm1a 1287; Mephisto Pm1a Pm2 540; Normandie Pm1a Pm2 347; Pompe Pm1a 1287; Ring Pm1a 1287. |
PM10
| Chromosome | 1D |
| Varieties | Norin 4 1482; Norin 26 1482; Norin 29 1482; Penjamo 62 1482; Shinchunaga 1482. |
| Varieties (alt.) | T. spelta duhamelianum Pm11 1481. Pm10 was detected using a culture derived from a hybrid of B. g. tritici and B. g. agropyri . |
PM11
| Chromosome | 6BS |
| Varieties | Chinese Spring 1481; Salmon 1481; T. compactum No. 44 1481. |
| Varieties (alt.) | T. spelta duhamelianum Pm10 1481. Pm11 was detected using a culture derived from a hybrid of B. g. tritici and B. g. agropyri |
PM12
| Note | Derived from Ae. speltoides .
The earlier location of 6A 1017 was not correct. 6B = 6BS- |
| Chromosome | 6SS |
PM13
| Note | Derived from Ae. longissima accession TL01.
T |
| Chromosome | 3BL |
3BS-3S[1] #1S.
PM14
| Chromosome | 6B |
| Varieties (alt.) | Akabozu Pm10Pm15 1478; Kokeshikomugi Pm15 1478; Norin 10 Pm15 1478. |
Pm14 and Pm15 were detected using hybrids between B. g. tritici and B. g. agropyri cultures.
PM15
| Chromosome | 7DS |
| Varieties (alt.) | Akabozu Pm14 1478; Chinese Spring Pm11 1478; Kokeshikomugi Pm14 1478; Norin 4 Pm10 1478; Norin 10 Pm14 1478; Norin 26 Pm10 1478; Shinchunaga Pm10 1478; T. macha subletschumicum Pm10 1478; T. compactum No. 44 Pm11 1478. |
Pm14 and Pm15 were detected using hybrids between B. g. tritici and B. g. agropyri cultures.
PM16
| Chromosome | 4A |
| Chromosome | 5B |
| Varieties | Line 70281 = Norman/*3 Beijing 837 10217; Norman lines with resistance from T. dicoccoides CL10600251201. |
| Type varieties | T. dicoccoides CL1060025 1201. |
| Marker associations | Pm16 – 5.3 cM – Xgwm159-5B 10217. |
To account for the different chromosome locations a 4A-4B translocation was suggested
10217. Based on the 5B location and similar disease responses
Pm16 and
Pm30 may be the same
10217.
PM17
PM19
| Chromosome | 7D |
| Varieties | T. durum 'Moroccos 183'/ Ae. tauschii AE 457/78 853. |
| Varieties (alt.) | Synthetic XX186 Pm2 853. |
| dv | Ae. tauschii 853. |
PM20
PM21
| Note | 6AS = T |
| Chromosome | 6AL |
6VS#2 {1177, 11714}.
Deleted.
Pm22 . Deleted, renamed as Pm1e
Deleted.
Pm23 . Deleted, Renamed as Pm4c .
PM24 . TraesCS1D02G058900; AET1Gv20142700. This locus is also named RMG1 ( RWT4 ) – see Reaction to Magniporthe grisea .
| Synonym | Pm24a 571, Pm24b 10994, WTK3 11414 |
| Chromosome | 6D |
| Chromosome | 1DS |
| Chromosome bin | 1DS5-0.54-1.00. |
| Varieties | Baihulu {10994, 11414}; Chiyacao 571; Hongmangmai 11414; Hulutou {11413, 11414}. |
| Marker associations | Xgwm789-1D/Xgwm603-1D – 2.4 cM – Pm24/Xgwm1291-1D – 3.6 cM – Xbarc229-1D {10109, 10957}; Xgwm789/Xgwm603-1D – 2.4 cM – Pm24 – 6 cM – Xbarc229-1D {10109, 10957, 10994}. Located in a 9.3 cM region flanked by Xgwm337-1D and Xcfd83/Xcfd72-1D 11413. |
| c | Pm24 encodes a tandem kinase protein with putative pseudokinase domains. The gene was designated Wheat Tandem Kinase 3 ( WTK3 ) – this gain of function mutation was conferred by a 6 bp deletion of lysine/glycine codons (K400G401) in the KIN1 domain 11414. GenBank MK950855. The same candidate gene was predicted for PmDTM in Datoumai (11556), but according to those results Chiyacao, Hulutou and Datoumai showed differential responses to an array of Bgt isolates 11414. |
PM25
| Synonym | PmTmb {1344, 1343} |
| Chromosome | 1A |
| Varieties | PI 599035 = NC94-37781344. |
| Varieties (alt.) | NC96BGTA5 = Saluda[*] 3/PI 427662 Pm3a 1343. |
| dv | T. monococcum PI 427662 1343. |
Linked with 3 RAPDs, the nearest, OPAG04950, at 12.8 +/- 4.0 cM
1343; Associated with 3 RAPDs
1344.
PM26
| Note | Recessive 0001. |
| Chromosome | 2BS |
| Sources / synonyms | Bethlehem[*] 8/ T. turgidum var. dicoccoides 2BS 0001. |
| Type varieties | T. turgidum var. dicoccoides TTD140 0001. |
| Marker associations | Co-segregation with Xwg516-2B 0001. |
PM27
| Note | 6B (6B-6G) 0002. |
| Varieties | Line 146-155-T 0002. |
| Type varieties | T. timopheevii var. timopheevii K- 38555 0022. |
| Marker associations | 6BS...... Xpsr8/Xpsr964-6B – Pm27 – Xpsr154/Xpsr546-6B ......6BL 0002; Cosegregation with Xpsr3131-6B 0002. |
PM28
| Chromosome | 1B |
| Varieties | Meri 0022. |
PM29
| Note | Derived from Ae. ovata . |
| Chromosome | 7DL |
| Varieties | Pova 0129. |
| Marker associations | Location confirmed by cosegregation with molecular markers 0129. |
PM30
| Note | [ MIC20 ] |
| Chromosome | 5BS |
| Varieties | 87-1/C20//2*8866 Seletion 0163. |
| Marker associations | Pm30 – 5.6 cM – Xgwm159-5B 0163. Pm30 could be the same as Pm16 10217. |
PM31 Deleted. This gene designation
0301 is not valid; subsequent studies
10918 showed the gene is
Pm21 .
| Synonym | mlG 0301 |
| Chromosome | 6AL |
| Varieties | G-305-M/781//3*Jing411 0301. |
| Type varieties | T. dicoccoides G-305-M 0301. |
| Marker associations | cent.... Pm31 – 0.6 cM – Xpsp3029.1-6A – 2.5 cM – Xpsp3071-6A 0301. |
PM32
| Note | Derived from Ae. speltoides 10025. 1B= |
| Chromosome | 1BL |
| Chromosome | 1SS |
| Varieties | L501 = Rodina*6/ Ae. speltoides 10025. |
PM33
| Synonym | PmPS5B 10205 |
| Chromosome | 2BL |
| Varieties | Am9 = T. carthlicum PS5/ Ae. umbellulata Y39 10205. |
| tv2 | T. carthlicum PS5 PmPS5A 10205. |
| Marker associations | Xgwm536-2B – 18.1 cM – Pm33 – 1.1 cM – Xwmc317-2B – 1.1 cM – Xgwm111-2B – 1.8 cM – Xgwm383-2B 10205. |
PM34
| Chromosome | 5DL |
| Varieties | PI 604033 = NC97BGTD7 = Saluda*3/ Ae. tauschii TA2492 10241. |
| dv | Ae. tauschii TA2492 10241. |
| Marker associations | Xbarc177-5D – 5.4 cM – 2.6 cM – Xbarc144-5D 10241. |
PM35
| Chromosome | 5DL |
| Varieties | NC96BGTD3 = PI 603250 = Saluda*3/TA2377 10342. |
| dv | Ae. tauschii ssp. strangulata TA2377 10342. |
| Marker associations | Xcfd26-5D – 11.9 cM – Pm35 10342. |
PM36
| Chromosome | 5BL |
| Chromosome bin | 5BL6-0.55-0.76 10356. |
| Type varieties | MG-FN14999, a durum backcross line 5BIL-29 10356; T. turgidum ssp. dicoccoides MG29896 10356. |
| Marker associations | Xcfd7-5B – 10.7 cM – Pm36 – 0.8 cM – EST BJ261636 – 8.9 cM – Xwmc75-5D 10356; 5BIL-42 identified as the derivative with shortest T dicoccoides segment; IWB7454 (537.36 Mb, Svevo RefSeq) – PM36 – IWB22904 (538.44 Mb) 11709. |
PM37
| Chromosome | 7AL |
| Varieties | PI 615588 = NC99BgTAG11 = Saluda*3/PI 42731510372. |
| Type varieties | PI 427315 = T. timopheevii ssp. Ameriacum 10372. |
| Marker associations | Pm37 (PmAG11) was about 15 cM proximal to a cluster of markers that earlier co-segregated with Pm1 10372; A cross indicated linkage between Pm37 and Pm1 10372; Xgwm332-7A – 0.5 cM – Pm37 – 0.5 cM – Xwmc790-7A – 15.5 cM – Pm1 10372. |
A further gene derived from
T. monococcum PI 427772 was identified in BCBGT96A = PI 599036 = Saluda*3/PI 427772
10479. A single resistance gene was identified on chromosome 7AL in hexaploid germplasm NC96BGT4 (a
T. monococcum derivative). This gene was proximal to
Pm1 and considered to be different from
Pm37 , although possibly allelic
10274.
**PM38** TraesCS7D03G0183600
| Note | Adult plant resistance |
| Chromosome | 7DS |
| i | RL6058 = Tc*6/PI 5854810374. |
| Varieties | Lines with Sr57/Lr34/Yr18 . |
| Varieties (alt.) | Saar Pm5a Pm39 10481. |
| Marker associations | Xgwm1220-7D – 0.9 cM – Lr34/Yr18/Pm38 – 2.7 cM 10374. |
| c | ABC transporter; See Lr34 . This gene is identical to Yr18, Sr57, Lr34 and Ltn and confers stem rust resistance in some genetic backgrounds; see Reaction to Puccinia triticina , Reaction to Puccinia striiformis . |
PM39
| Note | Adult plant resistance |
| Chromosome | 1BL |
| i | Avocet-R+Lr46/Yr29 = AvocetR*3//Lalb mono 1B*4/Pavon 76 10480. |
| Varieties | Genotypes with Lr46/Yr29 ; see Reaction to Puccina |
triticina , Reaction to P. striiformis .
PM40
| Note | Derived from Th. intermedium 10539. Pm40 was not derived from Th. intermedium 11710. |
| Chromosome | 7BS |
| Chromosome bin | C-7BS-1-0.27. |
| Varieties | GRY19 10539; Partial amphiploid TAI7047 10539; Yu 10539; PI 672538 11710; Yu24 10539. |
| Marker associations | Xwmc426-7B – 5.9 cM – Xwmc3347B – 0.2 cM – Pm40 – 0.7 cM – Xgwm297-7B – 1.2 cM – Xwmc364-7B 10539; Xwmc-7B – 0.58 cM – Pm40 – 0.26 cM – BF291338 11710. Flanked by EST markers BF478514 and BF291338 11711. |
| c | TraesCS7B01G164000 , an NLR with an additional NBS region was identified as a candidate 11711. |
PM41
| Note | Derived from T. dicoccoides . |
| Chromosome | 3BL |
**bin:
PM42
| Note | Derived from T. dicoccoides. Recessive. |
| Chromosome | 2BS |
| Chromosome bin | 2BS-0.75-0.84. |
| Varieties | P63 = Yanda 1817/G303-1M/3*Jing 411 10559. |
| Type varieties | T. dicoccoides G303-1M 10559. |
| Marker associations | BF146221 – 0.9 cM – Pm42 – Xgwm148-2B 10559. |
PM43
| Note | Derived from Th. intermedium . |
| Chromosome | 2DL |
| Varieties | Line CH5025 = 7621696/TAI7045//2*Jing 411 10560; Partial amphiploid TAI7045 10560. |
| al | Th. intermedium Z1141 10560. |
| Marker associations | Xwmc41-2D – 2.3 cM – Pm43 – 4.2 cM – Xbarc11-2D 10560. |
PM44
| Chromosome | 3AS |
| Varieties | Hombar 10790. |
| Marker associations | Flanked by SSR markers distally located in chromosome arm 3AS 10790. CURATOR’S NOTE : This gene nane was based on a pre-publication request; the publication cannot be located. |
PM45
| Synonym | Pm57-6D 10790 |
| Chromosome | 6DS |
| Varieties | Line NWG0099 10791. |
| Varieties (alt.) | D5710791. |
| Marker associations | Close linkages are reported in the draft manuscript. |
PM46
| Note | Partial resistance. |
| Chromosome | 4DL |
| Chromosome bin | Distal to break point 0.56 FL10678. |
| i | RL6077 = Thatcher*6/PI250413 10847,10678. |
| Varieties | Chapingo 48 11070. |
| Marker associations | Pleiotropic or closely linked with Lr67/Yr46/Sr55/Ltn3 and aassociated with Xgwm165-4D and Xgwm192-4DL {10847, 10678}. |
| c | This multiple disease resistance locus was identified as a hexose transporter most similar to the STP13 family and containing 12 predicted transmenbrane helices 11070. |
PM47
| Note | Reccessive. |
| Synonym | PmHYLZ 10912 |
| Chromosome | 7BS |
| Chromosome bin | 7BS1-0.27-1.00. |
| Varieties | Hongyanglazi 10912. |
| Marker associations | Xgpw2119-7B – 7.5 cM – BE606897 – 1.7 cM – Pm47 – 3.6 cM ascob – Xgwm46-7A 10912. |
PM48
| Note | Identified as Pm2a 11678. |
| Synonym | Pm46 10935 |
| Chromosome | 5DS |
| Chromosome bin | 5DS1. |
| Varieties | Tabasco 10935. |
| Marker associations | Xgwm205-5D – 17.6 cM – Pm48 – 1.3 cM – Xmp510(BE498794) – 1.8 cM – Xcfd81-5D 10935. |
PM49
| Synonym | Ml5323 10937 |
| Chromosome | 2BS |
| Chromosome bin | 2BS-0.84-1.00. |
| Type varieties | T. dicoccum MG5323 10937. |
| Marker associations | Xcau516-2B – 7.2 cM – Pm49 – 4.1 cM – XCA695634 10937. |
PM50
| Chromosome | 2AL |
| Chromosome bin | C-2AL1-0.85. |
| Varieties | K2 TRI29907 10942. |
| Type varieties | T. dicoccum M129 10942. |
| Marker associations | Xgwm294-2A – 2.9 cM – Pm50 10942. K2 is a backcross derivative of German winter wheat cv. Alcedeo with T. dicoccum accession M129 as donor of mildew resistance 10942. |
PM51
| Note | Putative Th. ponticum derivative. |
| Synonym | PmCH86 11026 |
| Chromosome | 2BL |
| Chromosome bin | 2BL60.89-1.00. |
| Varieties | CH7086 11026. |
| Marker associations | Xwmc332-2B – 3.2 cM – Pm51 – 1.5 cM – BQ246670 11026. |
PM52
| Synonym | MlLX90 {11028, 11029} |
| Chromosome | 2BL |
| Chromosome bin | 2BL-0.35-0.50. |
| Varieties | DH51302 11715; Jimai 22 11714; Liangxing 99 {11028, 11029, 11716}; Shimai 26 11715. |
| Marker associations | Xcfd73-2B – 5.3 cM – Xwmc441-2B – 0.2 cM – XBE604758 – Pm52 – 2.9 cM – Xgwm120-2B 11028; XBE604758 – 5.5 cM – Xics34 – Pm52 – 0.8 cM – Xics30 – 6 additional ics markers – Xgwm120 11029. Located in a 533.6 – 612.9 Mb interval 11716. |
PM53 Curator’s note: A publication of this gene could not be located.
| Note | Derived from Ae. speltoides . |
| Synonym | PmNC-S16 11045 |
| Chromosome | 5BL |
| Varieties | NC09BGTS16, PI669386 = Saluda*3/TAU829 11045. |
| al | Ae. speltoides TAU829 11045. |
| Marker associations | Xwmc759/Xgwm499-5B/IWA6024 – 0.7 cM – Pm53 – IWA2454 – 5.9 cM – Xgwm408-5B 11045. |
PM54
| Synonym | PmA2K 11050 |
| Chromosome | 6BL |
| Chromosome bin | 6BL-0.450-1.00. |
| Varieties | AGS2000 PI612956 11050. |
| Marker associations | Xgpw2344-6B – 1.00 cM – wPt-9256 – Pm54 – 1.2 cM – Xbarc134-6B 11050. |
PM55
| Note | Derived from Dasypyrum villosum . |
| Synonym | Pm5VS {11108, 11109} |
PM56
| Note | Derived from S. cereale . 6AS (T |
| Chromosome | 6AL |
PM57
| Note | Derived from Ae. searsii . 2BL (T2BS·2BL-2S[S] #1) 11159. |
| Varieties | Line 89-346, TA510811159; Line 89(5)69, TA5109 11159; Line898(6)88 11728; TA5109 11728. |
| ad | BCS+2S[S] #1 TA3581 11159. |
| c | Encodes a tandom kinase with putative kinase-pseudokinse domains followed by a von Willebrand domain and orthologue of Lr9 (88.3% amino acid similarity) 11728. Line 89-346 has a 28% distal Ae. searsii segment and line 89(5)69 has a 33% distal Ae. searsii segment 11159. |
PM58
| Note | Derived from Ae. tauschii . |
| Synonym | PmTA1662 11171 |
| Chromosome | 2DS |
| Varieties | U6714-A-011, PI 682090 11320; U6714-B-056, PI 682089 11320. |
| dv | Ae. tauschii TA1662 11171. |
| Marker associations | Cosegregation with KASP[TM] markers K-TP331370, KTP338253, K-Tp15990 and K-Tp313873 11171. Cosegregating marker Xkasp68500 developed from AET2Gv20068500 distinguished TA1662 from random common wheat accessions 11749. |
PM59
| Synonym | Pm181356 11214 |
| Chromosome | 7AL |
| Chromosome bin | 7AL15-0.00-1.00. |
| Varieties | PI 181356 11214. |
| Marker associations | Xwmc525-7A – 1.8 cM – Xmag1759 – 0.5 cM – Pm18156 – 5.7 cM – Xmag1714 – 20.0 cM – Xcfa2257-7A 11214. |
PM61
| Chromosome | 4AL |
| Chromosome bin | 4AL4-0.8-1.00. |
| Varieties | Xuxusanyuehuang 11290. |
| Marker associations | Xgwm1604A – 0.23 cM – Pm61 – 0.23 cM – Xicsx79 11290. Pm61 was considered to be at a different locus to MlIW30 , a dominant gene in T. dicoccoides accession IW30 and its hexaploid derivative Line 2L6 11289. |
PM62
| Note | [ Pm2VL 11321.] Adult-plant resistance. 2BS·2VL#5 11321. |
| Varieties | NAU1823 11321. |
| Marker associations | X2L4g9P4/Hae111 11159. |
PM63
| Note | Pm628024 11331. |
| Chromosome | 2BL |
| Chromosome bin | 2BL6-0.89-1.00. PI 628024 11331. |
| Varieties | PI 628024 11331. |
| Marker associations | Xwmc175-2B – 1.7 cM – Xstars419-2B – 0.6 cM – Pm63 – 1.1 cM – Xbcd135.2 – 2B ; 710.3 – 723.4 in the CS RefSeq 1.0 11331. |
PM64
| Synonym | PmWE35 11346 |
| Chromosome | 2BL |
| Chromosome bin | 2BL4-0.5-0.89. |
| Varieties | WE35 11346. |
| Type varieties | T. dicoccoides G-573-1 11346. |
| Marker associations | Xwmc175-2B – 1.12 cM – Pm64/Xgwm47-2B – 2.18 cM – Xwmc332-2B 11346. Complete repulsion linkage with Yr5 in 644 F3 lines 11346. |
PM65
| Synonym | PmXM208 11356 |
| Chromosome | 2AL |
| Varieties | Xinmai 208 11356. |
| Marker associations | Xhbg327-2A – 4.4 cM – XresPm4/XTaAetPR5 – 0.6 cM – PmXM208 – 1.6 cM – Xbarc122-2A 11356. An allelism test of Pm65 and Pm4a showed a recombination value of 10.3 cM based on the frequency of susceptible F2 plants 11356. |
PM66
| Note | 4BS (4BL[.] 4S[l] #7S) 11364. |
| Varieties | TA3465 11364. |
| al | Ae. longissima (unknown accession). |
| Marker associations | 4S[l] S markers developed in 11364. |
PM67
PM68
| Chromosome | 2BS |
| Chromosome bin | 2BS-0.84-1.00. |
| Type varieties | T. durum TRI 1796 11466. |
| Marker associations | Xdw04 (TRITD2Bv1G010030, chr2B:21587671-21591163) – 0.22 cM – PM68 – 0.22 cM – Xdw12 (TRITD2Bv1G010880, chr2B:23374401-23375310) – 3.0 Mb – PM26/Xcau516-2B (TRITD2Bv1G012960, chr2B:26398438-26414596) – 36.8 cM – PM42 11466. |
PM69
| Note | PmG3M 11302. |
| Chromosome | 6BL |
| Chromosome bin | 6BL-0.7-1.00. |
| Varieties | Ruta + Pm69 11627. |
| itv | Svevo + Pm69 11627. |
| Type varieties | T. dicoccoides G-305-3M {11302, 11627} TD116180 (University of Haifa Wild Cereal Gene Bank), CGN19852 (Netherlands Centre for Genetic Resources) 11541. |
| Marker associations | Xgpw7262-6B – 6.9 cM – PM69 ( PmG3M ) – 4.5 cM – Xedm149-6B 11302. |
| c | Pm69 comprises RxN with RanGAP interaction sites, NB-ARC, and LRR domains 11627. GenBank KY825226.1. Collinearity analyses indicated homoeology with SR13_ 11627. |
| Chromosome | 1AS |
| Varieties | Wheats with Gli-A1a 1209 including CS; Lists in 1208, {491, 108}. |
Pm8 was suppressed when locus
Pm3 is transcribed (including Chinese Spring and Thatcher which have no currently detectable
Pm3 resistance alleles)
10828.
| Chromosome | 2DL |
| Varieties | 2DL-2M[b] L translocation lines. |
| ad | CS + 2M[b] TA7733 11662. |
| Marker associations | Mapped to a FL 0.49 – 0.667 region containing 19 2Mb-specific markers 11662. |
PMTR1 & **PMTR3I.** SECCE6Rv1G0382290 .
PmTR1 &
| Chromosome | 6RS |
| Varieties | TR1 and TR3 were described as stable wheat lines derived from different triticale sources; TR1 had post-seedling (‘age-dependent’) resistance and TR3 had all stage resistance. |
| c | These genes were shown to be allelic and the different responses were attributed to differences in expression 11686. Both proteins had similarity to Pm12 and Pm21, but differed from Pm8, Pm17 and Pm50 11686. |
| Note | Derived from Ae. longissimum . 6A and |
| Chromosome | 6B |
| ad | CS + 6S[l] #3 TA7548 11597. |
| Varieties | T27 (Ti6AS.6AL-6S[l] #3-6AL) 11597; R43 (T6BS.6BL-6S[l] #3[l] #3 11597. |
| al | Ae. longissimum TA1910 (11597). |
| Marker associations | Mapped to a distal 6S[l] #3 interval of 42.8 Mb flanked by markers Ael58410 and Ael5799 {11597). |
Pm6S[l] conferred resistance to 28 of 30 Chinese
Bgt isolates
11597.
| Chromosome | 5DS |
| Chromosome bin | 5DS-0-0.63. |
| Varieties | 10V-2 11380. |
| Marker associations | Xbwm255D/Xswgi066-5D – 1.2 cM – Pm10V-2/ several markers – 1.2 cM – Xcfd-5D 11380. |
| Chromosome | 7DS |
| Varieties | Arina 11291. |
| Marker associations | Xpsr160-7D – 1.3 cM – Xgwm350a-7D – 4.7 cM – PmAF7DS – 9.9 cM – Xbarc184/Xgwm111-7D 11291. |
Three of 61 Israeli Bgt isolates were avirulent: all three isolates were from tetraploid wheat accessions. It is possible that the gene may be present in many common wheat accessions.
| Chromosome | 5BL |
| Chromosome bin | 5BL14-0.75-0.76. |
| Varieties | N9134 10926; N973810927. |
| Type varieties | T. dicoccoides AS846 10926. |
| Marker associations | XMAG2498-5B – 1.3 cM – Pm36/XBJ261635 – 1.1 cM – PmAS846 – 1.3 cM – XFCP1-5B 10927. |
| Note | 1BS= |
| Chromosome | 1BL |
| Chromosome | 1RS |
| Varieties | Chuannong 17 10686. |
| al | S. cereale R14 10686. |
| Note | Recessive. |
| Chromosome | 7BL |
| Varieties | Dahongtou S761 11447. |
| Marker associations | XBE443877/Xwmc526-7B – 0.8 cM – pmDHT – 0.8 cM – Xgwm611/Xwmc581-7B – 0.9 cM – XBF473539/Xgwm577-7B – 0.9 cM – Xgwm577-7B 11447. |
| Chromosome | 6BL |
| Chromosome bin | 6BL-0.7-1.00. |
| Type varieties | T. dicoccoides G-305-3M 11302. |
| Marker associations | Xgpw-6B – 13.6 cM – PmG3M – 3.5 cM – Xuhw213-6B – 5.7 cM – Xedm149-6B 11302. |
| Chromosome | 5DS |
| Varieties | Jimai 23 11445. |
| Marker associations | Xytu3004 – 0.7 cM – PmJM23/Xytu201/Xbwm21/Xcfd81-5D – 1.8 cM – Xswgi068/Xbwm20 11445. |
| Chromosome | 7AL |
| Chromosome bin | 7AL16 0.86-0.90. |
| Type varieties | T. dicoccoides G18-16 10886. |
| Marker associations | Xgwm1061/Xgwm344-7A – 1.2 cM – PmG16/wPt-1424/wPt6019 – 2.4 cM – wPt0494/wPt9217/Xwmc809-7A 10886. |
| Chromosome | 3BL |
| Varieties | Zhoumai 22 10706. |
| Marker associations | Xgwm108-3BL – 10.3 cM – PmHNK – 3.8 cM – Xwmc291-3BL 10706. |
| Chromosome | 2AL |
| Chromosome bin | 2AL1 C-0.85. |
| Varieties | Zheng975410897. |
| Marker associations | Xgwm372-2A – 5.0 cM – PmHNK54 – 6.0 cM – Xgwm312-2A 10897. |
| Chromosome | 2AL |
| Varieties | Mv Hombar 11176. |
| Marker associations | XwPt-665330 – 0.3 cM – PmHo – 0.1 cM – XwPt-3114 11176. |
| Chromosome | 4AL |
| Varieties | Honghuaxiaomai 11565. |
| Marker associations | Located in a 1.77 Mb (0.18 cM) region flanked by Xkasp475200 and Xhnu522 11565. |
| Chromosome | 2BL |
| Varieties | KN0816 11598. |
| Marker associations | Mapped to a region of chromosome carrying Pm6 , Pm33 , Pm51 , Pm64 and PmQ but distinguished from each other by specificity 11598. |
v: LS5082
11629. ma: Located in the interval 710.3 – 711.0 Mb
11629.
| Note | PmLX66 was allelic with Pm2 11162. |
| Chromosome | 5DS |
| Varieties | Liangxing 66 11162. Identified as Pm2a 11503. |
| Note | Resistance is recessive {10476, 10477}. |
| Chromosome | 2AL |
| Varieties | Lankao 90(6)2112 10476; Zhengzhou 975410476. |
| Marker associations | TacsAetPR5-2A/Pm4 – 3.9 cM – Xgwm265-2A – 3.72 cM – Pm39 – 6.15 cM – Xgdm93-2A {10476, 10477}; TacsAetPR5-2A was converted to an STS marker 10477 |
| Chromosome | 3AS |
| dv | T. monococcum Line NJ3946 11677; PI 191097 = TA2032 11677. |
| Marker associations | Xbarc294-3A – 1.1 cM – PmNJ3946 – 0.8 cM – Xwgrc5153-3A 11677. |
| Chromosome | 4AL |
| Varieties | PBDH 11647. |
| Marker associations | Mapped to a 3.2 cM interval, 719.1-726.2 Mb (CS RefSeq 1.0) 11647. Cytology failed to detect a putative Agropyrum cristatum segment in PBDH 11647. |
| Chromosome | 2AL |
| Varieties | AM410205. |
| tv2 | T. turgidum subsp. carthlicum pS5 Pm33 10205. |
| Marker associations | Xgwm356-2A - 10.2 cM - PmPS5A ; PmPS5A is located at or near the Pm4 locus10205. |
| Note | Recessive. |
| Varieties | Hongxinmai 11461. |
| Marker associations | Xstars419-2B – 0.6 cM – Xicsq405 2B – 0.8 cM – PmQ – 0.2 cM – XWGGBH913-2B 11461. PmQ is very close to Pm51, Pm63 and Pm64 . |
| Chromosome | 2AS |
| Varieties | Line XQ00508 11734. |
| Marker associations | Located to 226.7 kb interrval 11734. All F2 plants in crosses with lines having Pm26 (1,226 plants), Pm42 (1,198 plants) and Pm26 (1,583 plants) were resistant to the test isolate but the response arraye of the lines appeared to be diferente 11734. |
| Note | Recessive. |
| Chromosome | 7BL |
| Varieties | Shangeda 11453. |
| Marker associations | SNP2-58 – 0.4 cM – PmSGD – 0.8 cM – SNP2-46 11453. |
| Chromosome | 7AL |
| Chromosome bin | 7AL 18-0.90-1.00. |
| dv | T. boeoticum PAU5088 PmTb7A.2 11130. |
| Marker associations | Mapped to a 4.3 region flanked by wPt4553 and Xcfa2019-7A 11130; Estimated to be 46 cM proximal to Pm1 11130. |
| Chromosome | 7AL |
| dv | T. boeoticum PAU5088 PmTb7A.1 11130. |
| Marker associations | Mapped to a 0.8 cM region flanked by MAG1759 and MAG2185b in the region of Pm1 11130. |
| Chromosome | 7BL |
| Chromosome bin | 7BL10-0.78-1.00. |
| Varieties | Tanmai4 10961. |
| Marker associations | Xgwm611-7B – 7.0 cM – PmTm4 – 14.6 cM – Xest92 – 2.9 cM – Xbarc1073/Xbarc82-7B 10961; XWGGC6892 – 0.6 cM – PmTm4/XWGGC5746 – 0.03 cM – XWGGC891 11452. |
| Note | Recessive. |
| Chromosome | 4BL |
| Chromosome bin | 4BL5-0.85-1.00. |
| Varieties | Tian Xuan 45 11374. |
| Marker associations | Ax-110673642 – 3.0 cM – PmTx45 – 2.6 cM – ILP4B01G266900 11374. |
| Chromosome | 7AL |
| dv | UR206 11251. |
| Marker associations | Xwmc273-7A – 2.2 cM – PmU – 3.8 cM – Xpsp3003-7A 11251. PmU was transferred to, and was effective in, common wheat. |
| Note | PmW14 is allelic with Pm2 11162. |
| Chromosome | 5DS |
| Varieties | Wennong 14 11162. Identified as Pm2a 11503. |
| Note | Derived from Thinopyrum intermedium . |
| Chromosome | 2BS |
| Chromosome bin | 2BS-0.84-1.00. |
| Varieties | WE99. |
| Marker associations | Pmwe99 – 10.4 cM – Xgwm148-2B – 3.1 cM – Xbarc55-2B 11162. GISH failed to detect alien chromatin. |
| Note | Reccessive. |
| Chromosome | 2AL |
| Chromosome bin | 2AL1-0.58-1.00. |
| Varieties | Xiaohongpi 11009. |
| Marker associations | Xhbg327-2A – 0.6 cM – Pmx/Xsts-bcd1231 – 8.9 cM – XresPm4/Xgpw4456-2A 11009. This gene and close markers showed distorted segregation ratios and some discrepancy of markers relative to Pm4 alleles 11009. |
| Note | 2U(2B) 10367. |
| su | Laizhou 953*4/Am9 (Am9 = Ae. umbellulata Y39/ T. turgidum ssp. carthlicum PS5) 10367. |
| dv | Ae. umbellulata Y39 10367. |
| Marker associations | Associated with 2U markers Xgwm257, Xgwm296 and Xgwm319 10367. |
| Chromosome | 2AL |
| Varieties | Yumai 66 10619. |
| Marker associations | XKsum193-2A – 2.4 cM & 3.6 cM – PmYm66 10619. |
| Chromosome | 5BL |
| Chromosome bin | 5BL 0.59-0.76. |
| Type varieties | T. dicoccoides I222 10892. |
| Varieties | 3D232 10892. |
| Marker associations | Xwmc415-5B – 1.3 cM – Ml3D232 – 3.3 cM – CJ832481 10892; Co-segregation with 8 EST markers including an NBS-LRR analogue 10892. |
| Chromosome | 2BL |
| Chromosome bin | 2BL6 0.89-1.00. |
| Varieties | NC97BGTAB10, PI 604036 10873. |
| Type varieties | T. dicoccoides PI 471746 10873. |
| Marker associations | Xwmc445-2B – 7 cM – MlAB10 10873. |
| Varieties | Adlungs Alemannen 854. |
| Varieties | Bretonischer Bartweizen 854. |
| Chromosome | 4B |
| Varieties (alt.) | Halle 13471 Pm2 96; H8810/47 Pm2 96; Maris Dove Pm2 96. |
| Type varieties | T. durum line 96. |
| Varieties | Garnet 854; Many old German cultivars 854. |
| Note | Pm24 11414. |
| Chromosome | 1DS |
| Varieties | Hulutou 11257. |
| Marker associations | Xgwm-1D – 1.7 cM – Xwggc3026 – 1.5 cM – MlHLT – 2.1 cM – Xwggc3148 – 4.0 cM – Xcfd83-1D 11257. |
| Note | See Pm60. |
| Chromosome | 7AL |
| Chromosome bin | FL 0.86 10545. |
| Type varieties | T. dicoccoides IW72 10545. |
| Marker associations | Xmag1759-7A – 8.2 cM – MlIW72 – 3.3 cM – Xmag2185-7A – 1.6 cM – Xgwm344-7A 10545. |
| Synonym | MLIW30 11289 |
| Chromosome | 4AL |
| Chromosome bin | Line 2L6 11289. |
| Varieties | Line 2L6 11289. |
| Type varieties | T. dicoccoides IW30 11289. |
| Marker associations | Xbarc78-4A – 1.00 cM – XB1g2020.2 – 0.1 cM – MlIw30 – 0.1 cM – XB1g2000.2 – 2.6 cM – Xgwm350-4A 11289. |
| Chromosome | 2BS |
| Chromosome bin | 2BS3-0.84-1.00 10921. |
| Type varieties | T. dicoccoides IW170 10921. |
| Marker associations | XcauG2 – 0.6 cM – MlIw170/Xcfd238-2B – 2.15 cM – XcauG8/BF201235/Xwmc243-2B 10921; Iw1 – 18.77 cM – MlIw170 10921. This gene is located in the same region as Pm26 10921. |
| Chromosome | 7AL |
| Chromosome bin | 7AL-16-0.86-0.90. |
| Type varieties | T. dicoccoides IW172 11095. |
| Marker associations | WGGC4664/WGGC4665/WGGC4668 – 0.44 cM – MlIW172 – 0.7 cM – WGGC4659 11095. |
| Note | Recessive, hemizygous-effective 0339 |
| Chromosome | 7B |
| Varieties (alt.) | Jieyan 94-1-1 Pm8 0339. |
| Chromosome | 7AL |
| dv | T. monococcum TA2033 10393. |
| Marker associations | Xmag1757/Xmag2185 – 2.7 cM – Mlm2033/Xmag2185 – 1.3 cM – Xgwm344-7A 10393; Xmag1757 – 5.9 cM – Mlm2033/Xmag2185/Xgwm344/Xgwm146-7A – 4.7 cM – Xmag1986 10393; Xmag1757/Xmag1714/Xmag1759 – Mlm2033 – 0.9 cM – Xmag2185/Xgwm344-7A 10393; Xwgrc353/Xwggc4659 – 0.84 cM – Mlm2033/Xmag8626/Xmag9060/Xmag2185/Xmag5240 – 0.06 cM – Xmag8415/Xmag8220 11190. |
| Chromosome | 7AL |
| dv | T. monococcum ssp. aegilopoides M80 10393. |
| Marker associations | Xmag1757/Xmag1759 – 3.6 cM – Mlm80 – 0.7 cM – Xmag2166/Xgwm344-7A 10393; Xwggc4655 – 0.29 cM – Mlm80 – 0.57 cM – Xwgrc253/Xwgrc271 11190. Mlm2033 and Mlm80 appeared to be allelic and their relative locations suggest they are allelic with Pm1 10393. |
| Chromosome | 4AL |
| Type varieties | T. turgidum ssp. dicoccoides NFS10 11666. |
| Marker associations | Located to a 0.3 cM interval of 2.1 Mb (729275816-731365462) in CS refseq 1.0 11666. Considered to be located at a different locus to Pm61 and MlIW30 11666. |
| Chromosome | 7DS |
| Chromosome bin | 7DS4-0.61-1.00 11004. |
| Varieties | NC96BGD1 PI597348 11004; Saluda*3/TA2570 11004. |
| Marker associations | Xgwm635-7D – 5.5 & 8.3 cM – MlNCD1 – 16.2 cM & 13.6 cM – Xgpw328-7D 11004. |
| Note | Reccesive |
| Chromosome | 7AL |
| Varieties | RD30 10175; TA2682c 10175. |
| Marker associations | Xgwm344-7A – 1.8 cM – mlRD30 – 2.3 cM – Xksuh9-7A 10175. |
TA2682c carries a second dominant gene located in chromosome 1A
10175.
| Chromosome | 6AL |
| Varieties (alt.) | RE714 Pm4b {0142, 1220}. |
| Type varieties | T. dicoccum 119 1220. Mlre showed a residual effect on the quantitative expression of APR in the presence of B. graminis pathotypes considered virulent for Mlre in standard seedling tests 0016. In addition to Mlre , a QTL for resistance effective at the seedling stage was associated with microsatellite marker Xgwm174-5D 0142. |
| Note | Recessive, hemizygous-effective 0339 |
| Chromosome | 7B |
| Varieties | Siyan 94-2-1 0339. |
| Note | Derived from Aegilops neglecta. |
| Chromosome | 7AL |
| Chromosome bin | 7AL15-0.99-1.00. |
| Varieties | NC09BGTUM15 11216. |
| al | Ae. neglecta TTCC 223 11216. |
| Marker associations | Xwmc525-7A / IWA8057 – 0.7 cM – Xcfa2257-7A – 0.4 cM – MlUM15 – 0.8 cM – Xcfa2240-7A – 2.8 cM – Xmag2185 – 3.4 cM – IWA2929 5 – 4.0 cM – IWA4434 11216. |
| Chromosome | 2BS |
| Varieties | WE74 11589. |
| Type varieties | T. dicoccoides G-748-M 11589. |
| Marker associations | Mapped to a 799.9 kb region corresponding to physical region 25.48-26.28 in CHr2Zavitan v2.0 (26.5927.01 in IWGSC RefSeq v1.0) 11589. The relationship to Pm26 and MlIW170_ was not established 11589. |
| Note | Recessive and hemizygous-effective 0258 |
| Chromosome | 7B |
| Varieties | Xiaobaidong 0258. |
| Type varieties | T. dicoccoides 1055 10029. |
| Chromosome | 2BS |
| Varieties | WE74 = YD1817/G-748-M//7*ND01 11665. |
| Type varieties | T. dicoccoides G-748-M 11665. |
| Marker associations | Co-segregated with WGGBD425 11665.Located in the same region as Pm26, MlIW170 , and MlWE74 11665. |
| Synonym | MLZec 10127 |
| Chromosome | 2BL |
| Varieties | Zecoi 1 = Ralle*3/ T. dicoccoides Mo49 10127. |
| Type varieties | T. dicoccoides Mo49 10127. |
| Marker associations | Distally located in chromosome 2BL 10127; Xwmc356-2B – 2.0 cM – PmZec1 10127. |
| Chromosome | 2AL |
| Chromosome bin | 2AL1-0-0.85. |
| Varieties | Line 92145E8-9 11436. |
| Marker associations | Xwmc181-2A – 9.3 cM – Xsdauk682-2A – 2.8 cM – Ml92145E8-9 – 0.8 cM – Xsdauk-2A – 18.7 cM – Xgwm356-2 11436. |
| Chromosome | 1A |
| Varieties | Forno/ T. spelta var. Oberkulmer mapping population; the resistance was contributed by Oberkulmer 0051. |
| Marker associations | Associated with Xpsr1201-1A and Xpsr941-1A 0051. |
| Chromosome | 1B |
| Varieties | Forno/ T. spelta var. Oberkulmer mapping population; the resistance was contributed by Forno 0051. |
| Marker associations | Associated with Xsfr3(LRR)-1B and Xpsr593-1B 0051. |
| Chromosome | 1D |
| Varieties | Forno/ T. spelta var. Oberkulmer mapping population; the resistance was contributed by Oberkulmer 0051. |
| Marker associations | Associated with Xpsr168-1D and Xglk558-1D 0051. |
| Chromosome | 2A |
| Varieties | Forno/ T. spelta var. Oberkulmer mapping population; the resistance was contributed by Oberkulmer 0051. |
| Marker associations | Associated with Xpsr380-2A and Xglk293-2A 0051. |
| Chromosome | 2D |
| Varieties | Forno/ T. spelta var. Oberkulmer mapping population; the resistance was contributed by Oberkulmer0051. |
| Marker associations | Associated with Xpsr932-2D and Xpsr331-2D 0051. |
| Chromosome | 3A |
| Varieties | Forno/ T. spelta var. Oberkulmer mapping population; the resistance was contributed by Forno0051. |
| Marker associations | Associated with Xpsr598-3A and Xpsr570-3A 0051. |
| Chromosome | 3D |
| Varieties | Forno/ T. spelta var. Oberkulmer mapping population; the resistance was contributed by Oberkulmer 0051. |
| Marker associations | Associated with Xpsr1196-3D and Xsfr2(Lrk10)-3D 0051. |
| Chromosome | 4A |
| Varieties | Forno/ T. spelta var. Oberkulmer mapping population; the resistance was contributed by Forno 0051. |
| Marker associations | Associated with Xgwm111-4A and Xpsr9344A 0051. |
| Chromosome | 4A |
| Varieties | Forno/ T. spelta var. Oberkulmer mapping population; the resistance was contributed by Forno 0051. |
| Marker associations | Associated with Xmwg710-4A and Xglk128-4A 0051. |
| Chromosome | 4B |
| Varieties | Forno/ T. spelta var. Oberkulmer mapping population; the resistance was contributed by Forno 0051. |
| Marker associations | Associated with Xpsr593-4B and Xpsr1112-4B 0051. |
| Chromosome | 4D |
| Varieties | Forno/ T. spelta var. Oberkulmer mapping population; the resistance was contributed by Forno 0051. |
| Marker associations | Associated with Xglk302-4D and Xpsr1101-4D 0051. |
| Chromosome | 5A |
| Varieties | Forno/ T. spelta var. Oberkulmer mapping population; the resistance was contributed by Oberkulmer 0051. |
| Marker associations | Associated with Xpsr644-5A and Xpsr945-5A 0051. |
| Chromosome | 5A |
| Varieties | Forno/ T. spelta var. Oberkulmer mapping population; the resistance was contributed by Oberkulmer 0051. |
| Marker associations | Associated with Xpsr1194-5A and Xpsr918-5A 0051. |
| Chromosome | 5B |
| Varieties | Forno/ T. spelta var. Oberkulmer mapping population; the resistance was contributed by Oberkulmer 0051. |
| Marker associations | Associated with Xpsr580-5B and Xpsr143-5B 0051. |
| Chromosome | 6B |
| Varieties | Forno/ T. spelta var. Oberkulmer mapping population; the resistance was contributed by Forno 0051. |
| Marker associations | Associated with Xpsr167-6B and Xpsr964-6B 0051. |
| Chromosome | 7B |
| Varieties | Forno/ T. spelta var. Oberkulmer mapping population; the resistance was contributed by Forno 0051. |
| Marker associations | Associated with Xpsr593-7B and Xpsr129-7B 0051. |
| Note | This QTL corresponds to Pm5 0051. |
| Chromosome | 7B |
| Varieties | Forno/ T. spelta var. Oberkulmer mapping population; the resistance was contributed by Forno0051. |
| Marker associations | Associated with Xglk750-7B and Xmwg710-7B 0051. |
| Chromosome | 2BS |
| Varieties | Opata/W-7984 (ITMI) RI mapping population 2055; Resistance was contributed by Opata 0255. |
| Marker associations | Associated with Xcdo405-2B and Xmwg950-2B 0255. |
| Chromosome | 4B |
| Varieties | Opata/W-7984 (ITMI) RI mapping population 0255; Resistance was contributed by W-7984 0255. |
| Marker associations | Associated with Xcdo795-4B and Xbcd1262-4B 0255. |
| Chromosome | 7DS |
| Varieties | Opata/W-7984 (ITMI) RI mapping population 0255; Resistance was contributed by Opata 0255. |
| Marker associations | Associated with Xwg834-7D and Xbcd1872-7D 0255. |
| Chromosome | 4AL |
| Varieties | DT4AL-TM Line 8.1 11154. |
| Type varieties | T. militinae (AAGG) 11154. The 7G segment carrying this resistance likely replaces most of the 7BS segment known to be part of chromosome 4A 11154. |
| Note | Recessive |
| Chromosome | 2DL |
| Varieties | SE5785, Snipe/Yav79//Dack/Teal/3/ Ae. squarrosa 877 11084; NO7728-1 11084; NO7728-211084. |
| Marker associations | Xbarc59-2D – 3.6 cM – PmSe5785 – 4.6 cM – Xwmc817-2 11084. Bainong 64(R) / Jingshuan 16(S). DH lines: Four QTL from Bainong 64: Qpm.caas.1A . |
Xbarc148-1A –
Xgwmc550-1A interval. R[2] =0.074-0.099;
QPm.caas-4DL proximal to
Xwmc331-4D . R[2] =0.15-0.23;
QPm.caas-6BS , proximal to
Xbarc79-6BS , R[2] =0.09-0.13; and
QPm.caas-7AL , proximal to
Xbarc174-7AL , R[2] =0.067-0.071
10680.
Additional temporarily named genes and QTL are listed in
11655.
3.6. Reaction to Cephus spp. See also Stem solidness.⌂ Home
Pest: Wheat stem sawfly. North American species C. cinctus ; European species C. pygmeus . Resistance to wheat stem sawfly is associated with solid stem (see also: Stem solidness). Tetraploid wheat
3.7. Reaction to Cochliobolus sativus Ito & Kurib.⌂ Home
Disease: Cochliobolus root rot. CRR
| Note | Recessive. |
| Chromosome | 5BL |
| Varieties | Apex 764; Cadet 765. |
3.8. Reaction to Colletotrichum cereale⌂ Home
RCC1
| Chromosome | 5AL |
| Varieties | Chinese Spring 10939; Norin 4 10939; Shinchunaga 10939. |
| Marker associations | Xbarc165-5A – 1.2 cM – Rcc1 – 12.8 cM; Xgwm671-5A – 0.7 cM – Xwmc415-5A 10939. |
Susceptibility to this non-pathogen of common wheat is rare, with only one susceptible genotype being documented. A few susceptible tetraploid genotypes were identified
10939.
3.9. Reaction to Diuraphis noxia (Mordvilko)⌂ Home
Insect pest: Russian aphid, Russian wheat aphid.
DN1
| Chromosome | 7DS |
| Chromosome | 7D |
| Chromosome bin | 7DS-0.36-0.73 11225. |
| i | Betta-Dn1:PI 634768 {0211, 0004, 10277}; Caledon 0004; Gariep 0004; Karee-Dn1 0211; Limpopo-Dn1 0004; TugelaDn1:PI591932 {0211, 0004, 10277}. |
| Varieties | PI 137739 286. |
| Marker associations | Xgwm111-7D 210 – 3.20 +/- 0.20 cM – Dn1 0211. |
VIGS silencing of
5AL-B4 on chromosome 5A compromised resistance conferred by
Dn1 suggesting a decoy role
11333.
Tests of allelism indicated that
Dn1, Dn2, Dn5, Dn6, and
Dnx and four uncharacterized lines were identical or closely linked
11225.
DN2
| Chromosome | 7DL |
| Chromosome | 7DS |
| i | Betta-Dn2:PI 634769 286, 10277; Karee-Dn2:PI 663774 286, 10277; Tugela-Dn2: PI 634772 286 ,10277. |
| Varieties | PI 262660 286,863. |
| Marker associations | XksuA1-7D – 9.8 cM – Dn2 863; Myburg et al. 9968 identified two SCAR markers that mapped 3.3 cM proximal to Dn2 9968; Xgwm111-7D 200 – 3.05 +/- 0.18 cM – Dn2 286; XksuA1-7D – 9.9 cM – Dn2 – 2.8 cM – Xgwm437-7D 0353. |
According to Saidi & Quick
1250,
Dn1 and
Dn2 are probably allelic. Reference stocks with each gene showed allelism with a gene in PI 262605.
DN3
| Note | Recessive. |
| Varieties | Ae. tauschii SQ24/ T. turgidum TD651086. |
| dv | Ae. tauschii SQ24 1086. |
DN4
| Note | 1DL 863, |
| Chromosome | 1DS |
| i | Yumar 10397. |
| Varieties | Ankor 10397; CORWAI 260; CI 2401 260; Halt 0209; PI 151918 260; PI 372129 1250; Prairie Red 10397. |
| Marker associations | Xabc1561D – 11.6 cM – Dn4 863; Xgwm106-1D – 7.4 cM – Dn4 – 12.9 cM – Xgwm337-1D 0352; Xgwm1061D – 5.9 cM – Dn4 – 9.2 cM – Xgwm337-1D 10128. |
Dn4 and an uncharacterized gene in PI 151918 were allelic or tightly linked
11225.
DN5
| Chromosome | 7D |
| Chromosome | 7DS |
DN6
| Chromosome | 7D |
| Chromosome bin | 2AL1-0.85-1.00. |
| Varieties | CI 6501 260; PI 243781 1249,1250. |
| Marker associations | Dn6 – 3.0 cM – Xgwm111 352. Xgwm44-7D – 11.6 cM – Xgwm111-7D – 3.0 cM – Dn6 11225. |
DN7
| Note | Derived from S. secale cv. Turkey 77 9918 |
| Synonym | Dn2414 10478 |
| Chromosome | 1R |
DN9
| Chromosome | 1DL |
| i | Betta-DN9:PI 634770 10277. |
| Varieties (alt.) | PI 294994 Dn5Dn8 286. |
| Marker associations | Xgwm642-7D 180 – less than 3.20 cM – Dn9 286. |
| Chromosome bin | 7DL-0.1-077. |
| Varieties | PI 682675 11211. |
| Marker associations | Xcfd14 -7D – 2.3 cM – Xgwm437-7D – 9 cM – Dn10 – 29.1 cM – Xwmc488-7D 11211; Xcfd14 -7D – 3.6 cM – Xgwm437-7D – 11.3 cM – Dn10 – 35 cM – Xwmc488-7D 11211; Dn626580 – 2.0 cM – Dn2401 – 8.4 cM – Dn624151 11211. |
Temporary designations
| Chromosome | 7DS |
| Varieties | PI 220127 286. |
| Marker associations | Xgwm111-7D 210 – 1.52 +/- 0.15 cM – Dnx 286. Dnx was considered to be located at a locus different from Dn1, Dn2 or Dn5 286, which were likely to be identical or allelic. |
| Chromosome | 7BS |
| Type varieties | Line 1881 10145. |
| Marker associations | Xgwm46-7BS – 10.1 cM – Dn1881 – 12.8 cM – Xgwm333-7BL 10145. |
| Chromosome | 7DS |
| Varieties | CI2401, PI97812 11078. |
| Chromosome bin | 7DS-0.37-0.61 11211. |
| Marker associations | Xbarc214-7D – 1.1 cM – Dn2401 – 1.8 cM – Xgwm473 -7D 11078. |
| Note | 7DS M19026}. |
| Varieties | IG 100695 11226. |
| Marker associations | Xgwm44-7D – 13 cM – Xcfd14 - 7D – 15.7 cM – Dn100695 . |
| Chromosome | 7DS |
| Varieties | PI 626580 10981. |
| Marker associations | Dn626580 – 1.8 cM – Xbarc214-7D – 3.2 cM – Xgwm473-7D – 3.2 cM – Xgwm473-7D 10981. |
QTL
QTLs for antixenosis were associated with
Xpsr687-7D (7DS) and
Xgwm437-7D (7DL) in CS/CS (Synthetic 7D)
10136. Separate antibiotic effects were demonstrated for the same chromosome
10136. A QTL,
QDn.unlp.6A , for antixenosis was associated with
Xgwm1393-6AL and
Xgwm1150-6AL in a CS/CS(Synthetic 6A) DH population
10216.
3.10. Reaction to Eurygaster Integriceps⌂ Home
Sunn pest
EI1
| Chromosome | 4BS |
| Chromosome bin | 4BS4-C-0.27. |
| Marker associations | IWB73001 – Ei1/BS00022785 – IWB9610 11201. |
3.11. Reaction to Fusarium spp.⌂ Home
FHB1
| Synonym | QFhs.ndsu-3BS 9925, 175 |
| Chromosome | 3BS |
| i | HC374/3*98B69-147 10214; Sumai 3*5/Thatcher 10214. |
| Varieties | HC-147-126 10444; Rollag 11071. |
| Varieties (alt.) | Alsen Fhb5 {11071, 11237}; BW278 Fhb2 10225; Carberry Fhb5 {11237 }; ND744 Fhb5 11237; ND3085 Fhb5 11237; Sumai 5 Fhb2 Fhb5 {10314, 11237}. |
| Marker associations | XSTS3B-80 – 0.2 cM – Fhb1 – 1.1 cM – XSTS3B-142 10214; Placed in a 1.2 cM interval flanked by XSTS3B-189 and XSTS3B-206 10403; Xgwm389- 3B – 3.0 cM – Sr2/csr2 – 0.4 cM – Xgwm389- 3B – 2.0 cM – Fhb1/UMN10/ UMNv2 (coupling) 11210. Xgwm493-3B and Xgwm533-3B were confirmed as useful markers 11237. |
| c | A pore-forming toxin-like gene product encodes a chimeric lectin with two agglutinin domains and an ETX/MTXZ toxin domain 11205. |
The relationship of
Fhb1 to
Fhs1 or
Fhsb2 1096 is unknown. Lines combining
Fhb1 and
Sr2 are reported in
11170;
Fhb1 is located about 2 cM proximal to
Sr2 . SYN1 / Ocoroni DH population: three
QTL from SYN1 were identified,
QFhs.cim-2D (PVE 25%),
QFhs.cim-7A (PVE 4.7%) and
Qfhs.cim-7A (PVE 4.2%)
11165.
A marker study found that 14 of 66 wheats with putative FHB resistance shared markers indicative of the 3BS QTL in Ning 7840, Sumai 3, Wangshuibai and possibly Wuhan 3, plus Japanese landraces Shinchunaga and Shirasu No 1
10115. The original source may be the landrace 'Taiwan Wheat' rather than Funo
10115.
FHB2
| Chromosome | 6BS |
| Varieties | pbE8510444. |
| Varieties (alt.) | BW278 Fhb1 10225; Sumai 3 Fhb1 10225. |
| Marker associations | Xgwm133-6B – 4 cM – Fhb2 – 2 cM – Xgwm644-6B 10225. The relationship of Fhb2 to Fhs1 or Fhs2 1096 is unknown. |
FHB3
| Note | 7DS = T |
| Chromosome | 7AL |
FHB4
| Synonym | Qfhi.nau-4B 10282 |
| Chromosome | 4BL |
| Chromosome bin | 4BL5-0.86-1.00. |
| i | Mianyang 99323*4/Nanda 2419/Wangshibai 10885. |
| Varieties (alt.) | Wangshuibai Fhb5 10884. |
| Marker associations | Located in a 1.7 cM segment flanked by Xhbg226-4B and Xgwm149/Xmag4580-4B 10883. |
Although plants with
Fhb-4 were taller than the recurrent parent, the height difference was not associated with the
Rht-B1 locus
10885.
Type I resistance (% infected plants) in this cross was attributed to 10 chromosome regions among which
Qfhi.nau-4B (
Xwmc349-4B –
Xgwm149-4B - r[2 ] = 0.75),
XFhi.nau-5A (Xwmc96-5A –
Xgwm304-5A - R[2 ] = 0.27) and
Qfhi.nau-5B (Xgwm408-5B –
Xbarc140-5B ) from Wangshuibai were detected in at least 3 of 4 years
10282. A significant additive effect of QTL on 6D and 2A was also observed
10282.
FHB5
| Synonym | Qfhi.nau-5A {10282 }; Qfhs.ifa-5A 10076 |
| Chromosome | 5AS |
| Chromosome bin | C-5AS3-0.75. |
| i | Mianyan 99-323 and PH691 backcross derivatives selected for Qfhi.nau-5A 10896. |
| Varieties (alt.) | Alsen Fhb1 11237; Carberry Fhb1 11237; ND744 Fhb1 11237; ND3085 Fhb1 11237; Sumai 5 Fhb1 Fhb2 {10314, 11237}; Wangshuibai Fh4b 10896. |
| Marker associations | Mapped to a 0.3 cM interval between Xbarc117/Xbarc358/Xgwm293/Xgwm304-5A and Xgwm415-5A 10896. |
Closely linked in coupling with
Qflw.nau-5A for narrow leaf width, but recombination is reported in
11041.
According to
11487 Fhb5 might be the same as
Qfhs.ifa-5Ac but the issue remained ambivalent.
FHB6
| Note | Derived from Elymus tsukushiensis syn. Roegneria kamoji |
| Chromosome | 1AS |
T1AL.1AS-1E[ts] #1S
11048
FHB7
| Note | Derived from Thinopyrum ponticum |
| Synonym | FhbLoP 11118 |
FHB8
| Chromosome | 7D |
| i | Wangshuibai/4*PH691 7D-NIL1 11676; Wangshuibai/4*PH691 7DNIL2 11676. |
| Varieties (alt.) | Wangshuibai Fhb1 Fhb2 Fhb4 Fhb5 11676. |
| Marker associations | Xwgrb1500 (93.9 Mb, RefSeq 1.0) – Fbhb8/Xwgrb1587 – Xwgrb1559 (96.5 Mb) 11676. |
FHB9
| Note | QFhb-2DL 11719. |
| Chromosome | 2DL |
| Varieties | Shi4185 / Shijiazhuang8 RIL92 (11727}; Ji5625 / Wheaton NILs 11719. |
| Varieties (alt.) | Shi4185 + additional QTL in chr. 4A, 3D and 5D 11727; Ji5625 11719. |
| Marker associations | Located in an 8.0 Mb (2.21 cM) region (KASP-525 – KAS-12056, 525.9 – 533.8, Mb, CS RefSeq 2.1) 11727; 524.9 – 531.0 Mb 11719. |
Other names
| Varieties | Line A 1096. |
| Varieties (alt.) | Ning 7840 Fhs2 1096. |
| Varieties | Line B 1096. |
| Varieties (alt.) | Ning 7840 Fhs1 1096. A major QTL was associated with several linked AFLP markers tentatively located in chromosome 7BL of Ning 7840 0005. |
QTL
QTLs for resistance to
Fusarium graminearum detected in the cross Renan/Recital
10069. All resistance alleles, except
QFhs.inra-3A , were contributed by Renan. LOD scores and percent of variation explained by the QT (R[2] ) are average of three years of field tests.
| Marker associations | Associated with Xgwm382c-2A (LOD=6.3, R[2] =14.4%). |
| Marker associations | Associated with Xgwm374-2B (LOD=7.6, R[2] =12%). |
| Marker associations | Associated with Xbcd372-3A (LOD=3.7, R[2] =6.2%). |
| Marker associations | Associated with Xgwm383b-3B (LOD=5.4, R[2] =10.5%). |
| Marker associations | Associated with Xpsr170a-5A (LOD=3.8, R[2] =5%). |
| Marker associations | Associated with Xgwm639b-5A 8LOD=6.6, R[2] =14%). |
| Marker associations | Associated with B1 (LOD=6.3, R[2] =8.5%). |
| Marker associations | Associated with Xcfd29-5D (LOD=4.4, R[2] =7%). |
| Marker associations | Associated with Xcfd42-6D (LOD=2.7, R[2] =6.6%). |
| Chromosome | 2AL |
| Varieties | Sumai 3/Stoa RI mapping population; the QTL was contributed by Stoa 9925. |
| Marker associations | Association with RFLP XksuH16-2A (LOD >3) 9925,175. |
| Chromosome | 3AS |
| Type varieties | T. turgidum var. dicoccoides. Recombinant substitution lines LDN and LDN(Dic-3A). The resistant allele was contributed by T. dicoccoides 372. |
| Marker associations | Associated with Xgwm2-3A (explained 37% of the phenotypic variation)372; QFhs.ndsu-3AS was placed within a 11.5 cM region flanked by TRAP marker loci Xfcp401-3A and Xfcp397.2-3A 10482; This gene was transferred to durum cultivars using the closely linked marker Xgwm2-3A 11367. This gene is unlikely to be a homoeologue of Qfhs.ndsu-3BS = Fhb1 10482. |
| Chromosome | 3BS |
| Varieties | Sumai 3/Stoa RI mapping population; the QTL was contributed by Sumai 3 9925,0175. |
| Marker associations | Association with Xbcd907-3B.2 (LOD >3) 9925 and microsatellite markers Xgwm1533-3B and Xgwm493-3B 0175; QFhs.ndsu-3B from Sumai 3 was associated with microsatellite loci Xgwm533-3B and Xgwm274-3B in certain Sumai 3 derivatives 10062. In Ning 894037 the QTL has the same location and similar SSR bands to Sumai 3 10085. STS marker SRST.3B1 was mapped between Xgwm533-3B and Xgwm389-3B and associated with QFhs.ndsu-3B 10072. QFhs.ndsu.3B was associated with markers Xgwm533-3B, Xbard133-3B, Xbarc147-3B and Xgwm493-3B 10073. |
This QTL explained 42% of the variation in Sumai 3/Stoa
0175.
Two additional QTL for resistance to
Fusarium graminearum were identified in the croSumai3/Stoa
0175. The QTL on 4BS was associated with
Xwg909-4B and the QTL on 6BS was associated with
Xbarc101-6B and
Xbcd1383-6B 0175. The QTL associated with markers
Xgwm493-3B/Xgwm533-3B (explaining 24.8 % of the variation), and
Xbarc101-6B/Xbcd1383-6B were also identified in a RIL population from the cross ND2603/Butte 86
0175. In addition, one QTL on chromosome 3AL associated with
Xbcd941-3A and one on chromosome 6AS associated with
XksuH4-6A were identified in RILs from the cross ND2603/Butte 86
0175.
Remus / CM-82036 (a Sumai 3 derivative): DH population: Resistance QTL on chromosome 3BS associated with
Xgwm493-3B and
Xgwm533-3B 0240. Additional QTL in this cross were detected on
chromosome 5A, associated with
Xgwm293-5A and
Xgwm304-5A , and possibly on 1B, associated with
Glu-B1 0240.
Two major genes with additive effects were reported in crosses between Sumai 3 (resistant) and two susceptible cultivars
0174. One of the genes was assigned to 5AL based on linkage to the dominant awn suppressor
B1 (RF 15.1-21.4%).
Alve (S) / Line 685 R: DH population: QTL on chromosomes 4D (
Rht-D1 ), 3BS, 5A and 2BL
10972. Two resistance QTL were needed to counteract the negative effect of the
Rht-D1b semi-dwarfing allele
10972.
Arina (R) / Forno (S): Three QTLs,
QFhs.fal-6DL (R[2] =22%),
QFhs.fal-5BL.1 (in Forno, R[2] =14%) and
QFhs.fal.4AL (R[2] =10%) and 5 minor QTLs in 2AL, 3AL, 3BL, 3DS and 5DL were detected
10172.
Arina / Riband DH lines: QTL affecting ADUPC were identified in 1BL(2), 2B, 4DS, 6BL and 7AL (Arina), and 7AL and 7BL (Riband). The most effective was the 4DS QTL that appeared to be an effect of
Rht-D1a rather than height
per se 10464.
Baishanyuehuang (R) / Jagger (S): RIL population: Four genes/QTLs derived from the resistant parent included
Fhd1 (R[2] =0.16),
Qfhb.hwwg-3BS c (R[2] =0.09),
Qfhb.hwwg-3A (R[2] =0.05-0.08) and
Qfhd.hwwg-5A (R[2] =0.05 in one trial)
10950.
Cansas (moderately resistant) / Ritmo (susceptible): Map based analysis across environments revealed seven QTL,
QFhs.whs-1BS (1RS),
QFhs.whs-3B (not
Fhb1 ),
QFhs.whs-3DL, QFhs.whs-5BL '(renamed
Qfhs.lfl-1BL in
10768)'
, QFhs.whs-7AL and
QFhs.whs-7BL (cumultatively, R[2] = 0.56). The chromosome 1D gene was primarily involved in resistance to fungal penetration and the others in resistance to spread
10503. There were significant correlations of FHB response with height and heading date
10503.
Qfhs.lfl-1BL was verified in F4:7 lines and detected in Biscay, History and Pirat
10768. The renamed
Qfhs.lfl-1BL reduced FHB severity by 42% relative to lines lacking it
10698. This gene was also present in Biscay, History and Pirat
10698.
CS / CS(Sumai 3 7A): QFhb7AC , nearest marker
Xwmc17-7A , explained 22% of phenotypic variance for Type II and 24% of phenotypic variance for Type III resistance
10798.
Chris / Frontana: In a reciprocal backcross analysis of Chris monosomics/Frontana, Frontana chromosomes 3A, 6A and 4D reduced visibly diseased kernels, kernel weight and DON content, whereas Frontana chromosomes 2A, 2B, 4B and 7A increased the same traits
10398. Further study of the 3A, 6A and 4D reciprocal substitution lines indicated that chromosome 3A of Frontana had the largest effect on incidence, severity, spread and kernel damage, 4D less so and 6A possibly not at all
10900.
DH181(R)(Sumai 3 / HY 386 Seln.): QTL identified in 2DS, 3AS, 3BS, 3B Cent. region, 4DL, 5AS, 6BS
10213.
Dream(R) / Lynx(S): RIL population: Following inoculation with
F. culmorum 4 QTL for AUDPC were identified on chromosomes 6AL (R[2] =19%), 1B (12%), 2BL (11%) and 7BS (21%). The resistance allele
in 1B came from Lynx and was associated with T1BL.1RS
10260.
Dream*4 / Lynx lines were developed by selection of QTL on chromosomes 6AL, 7BS and 2BL. Lines carrying
QFhs.lfl-6AL and
QFhs.lfl-7BS were more resistant than lines lacking them; the 2BL QTL effect was not verified
10470.
Chokwang (R) / Clark (S): Qfhb.ksu-5DL.1 associated with
Xbarc239-5D (R[2] =0.24)
10276,
Qfhb.ksu4BL.1 associated with
Xbarc1096-4B (R[2] =0.13)
10276, and
Qfhs.ksu-3BS.1 marginally associated with the region of
Fhb1 (R[2] =0.1)
10276.Ernie (Res) / MO94-317 (Sus): 243 F8 RIL population. Four QTLs from Ernie detected as follows:
Qfhs.umc-2B , linked to
Xgwm278-2BS , R[2] = 0.04
10456;
Qfhs.umc-3B , linked to
Xgwm285-3BS , R[2] = 0.13
10456;
Qfhs.umc-4B , linked to
Xgwm495-4BL , R[2] = 0.09
10456.
Qfhs.umc-5A , linked to
Xgwm165-5A , R[2] = 0.17
10456. Evidence was provided to suggest the QTL acted additively
10456.
Frontana (R) / Remus (S): Major QTLs in chromosomes 3AL (
Xgwm270-3AL –
Xdupw227-3A region) and 5A (
Xgwm129-5A –
Xbarc-5A region) accounted for 16% and 9% of the phenotypic variation (mainly type 1 resistance) over 3 years
10174.
Frontana (MR) / Seri82 (S): F3 and F3:5 populations: QTLs were located in chromosomes 1BL (R[2] =7.9%), flanked by AFLP markers, 3AL (R[2] =7.7%), flanked by
Xgwm720-3A and
Xgwm121-3A , and 7AS (R[2] =7.6%), flanked by anAFLP and
Xgwm233-7A 10349.
G16-92 (R) / Hussar (S): Two QTL for resistance to
F. culmorum were identified on chromosome 1A (resistance from Hussar) (R[2] = 0.01) and 2B (resistance from G16-92) (R[2] = 0.14)
10588.
Glenn (R) / MN00261-4 (S): RIL population: three of 15 QTL for FHB response and heading date were stable and explained >10% of the phenotypic variation; these were located on chromosome arms 5BL, 6BS (possibly
Fhb2 ) and 7AS
11568.
Grandin (S) / PI277012 (I): DH population: Two QTLs,
Qfhb.rwg-5A.1 on 5AS (R[2] 0.06-0.2) and
Qfhb.rwg-5A.2 on 5AL (R[2] =0.12-0.2) conferred type I and II resistance and reduced DON content
0147. The new QTL on 5AL was closely but not completely linked with gene
q which is present in PI277012
10860.
Hobbit Sib / T. macha
| Type varieties | Strongfield 10445. |
| Marker associations | Spanning 16 cM, this QTL peaking on Xgwm552B explained 23% of the phenotypic variation 10445. |
| Type varieties | T. turgidum var. carthlicum cv. Blackbird10445. |
| Marker associations | Spanning 23 cM and peaking on Xwmc397 this QTL accounted for 23% of the phenotypic variation 10445. |
| Note | Associated mainly with resistance to fungal penetration 10073. |
| Chromosome | 5A |
| Varieties | Remus/CM-82036 10076. |
| Marker associations | Associated with markers Xgwm293-5A, Xgwm304-5A, Xgwm1057-5A, Xbarc117-5A, Xbarc186-5A, Xbarc100-5A and Xbarc40-5A 10073. Fine mapping divided this QTL into two components, Qfhs.ifa-5Ac located in the centromere region at 245.9 Mbp and a less effective Qfhs.ifa 5AS located at 290 Mbp. Both QTL were significantly associated with higher anther extrusion and plant height 11487. |
| sutv | LDN-DIC 7A 10401. |
| Type varieties | T. turgidum var. dicoccoides PI 78742 10401. |
| Marker associations | Located in an interval 39.6 cM thie QTL accounted for 19% of the phenotypic variation in a RIL population of Langdon/LDN-DIC 7A; nearest marker Xbarc121-7AL 10401. |
| sutv | LDN-DIC3A 10402. |
| Type varieties | T. dicoccoides 10402. |
| Marker associations | Located in an interval spanning 29.3 cM this QTL accounted for 37% of the phenotypic variation; peak marker, Xgwm2-3A 10402. |
| Varieties | Alondra10085. |
| Marker associations | Located on 2DS between SSR markers Xgwm2962D and Xgwm261-2D 10085. |
3.12. Reaction to Heterodera avenae Woll.., H. filipjeva (Madzhidov) Stelter⌂ Home
Cereal root eelworm; cereal cyst nematode.
CRE1
| Synonym | Cre 1388 |
| Chromosome | 2BL |
| Chromosome | 2B |
| i | AP = Prins[*] 8/AUS10894 1579. |
| Varieties | AUS 10894 1056; Beulah 10013; Chara 10163; Goldmark 10013; Goroke 10013; Kellalac 10013; Loros CI 3779 10013; Mira 10163; Mitre 10163; Ouyen 10013; RE8670 10013; Silverstar 10013; VI252 10013; VI727 10013. |
| Marker associations | Xglk605-2B - 7.3 cM - Cre1 - 8.4 cM - Xcdo588-2B/Xabc451-2B 1579; A PCR-based assay was developed from Xglk605-2B 1580; Co- |
segregation with
Xcsl107-2B . Four of 6 land varieties possessed
Xcsl107-2B . A variant haplotype of
Xcsl107-2B was present in AUS4930
10013;
Xcdo36-2B – 7.5 cM –
Xbcd1231-2B/XAtPPr5/Xcsl1072B/Cre1 10013.
CRE2
| Note | Derived from Ae. ventricosa 10 238, 9991. 6M[v ] 9991. |
| Varieties (alt.) | H-93-8 Cre6 238. Although H-93-8 is a double M[v] (5A), 7M[v] (7D) substitution line, Cre2 was presumed to be located in a separate undetected translocated 6M[v] segment 9991. |
CRE3
| Synonym | CcnD1 329, Ccn-D1 328 |
| Chromosome | 2DL |
| Varieties | Synthetic hexaploids 329. |
| dv | Ae. tauschii accessions AUS 18912 328; AUS 18913 328; CPI 110809 329; CPI 110810 328. |
| Marker associations | Colinearity with 2BL for Xcdo-36-2D and XAtPPr5/Xbcd1231-2D/G4/G12/Cre3 (see Cre1 ) 10013. |
CRE
| Synonym | Ccn-D2 328, CcnD2 329 |
| Chromosome | 2D |
| dv | Ae. tauschii accessions AUS 18914 329; CPI 110813 328. |
CRE5
| Note | Derived from Ae. ventricosa {0107, 0009}. |
| Synonym | CreX {9, 0183}, QCre-ma2A 11394. |
2AS
0107 = 2A-2N[v] -6N[v] .
CRE6
| Note | Derived from Ae. ventricosa 0138. |
| Chromosome | 5N |
| Varieties | H-9335 0138. |
| Varieties (alt.) | H-93-8 Cre2 0138. |
CRE7
| Note | Derived from Ae. triuncialis 0105. |
| Synonym | CreAet 0105 |
| Varieties | TR353 derivatives 0105. |
CRE8
6BL
0220, on basis of linkage with
Xbcd1-6B and
Xcdo347-6B 220.
CRE9
| Synonym | QCre-ma7D 11394 |
| Varieties | VPM-1/Moisson 95111394. v2 Madsen Cre5 11394; VPM-1 Cre5 11394. |
| Marker associations | Flanked by Xics7D-27-7D and BS00129645 11394. KASP markers BS00021745 , BS00150072 , and BS00154302 were developed 11394. Cre9 conferred resistance to Chinese isolates of H. filipjevi but not to H. avenae . |
Temporay designations
| Note | Derived from Ae. variabilis 2AS or |
| Chromosome | 2DS |
| ad | Line M 10487. |
| Varieties | Line D 10486. |
| Marker associations | RAPD markers OP021000, OpR41600, OpV3450 10486. |
| Note | Derived from Ae. variabilis |
| Chromosome | 3BL |
| Varieties | Line X 10487. |
| Marker associations | Co-segregation with RAPD OpY161065 0103 which was converted to SCAR16 10486. May be the same gene as Rkn-mn1 (see reaction to Meloidogyne naasi ). |
| Chromosome | 1AS |
| dv | T. monococcum Tm 14087 QCre.pau-2A 10749. |
| Marker associations | QCre.pau-1A was mapped in a 3.6 cM interval in a T. boeoticum Tb 5088 / Tm 14087 RIL population and was flanked by Xcfa2153-1A and BE444890 10749; R[2] =0.2610749. QCre.pau-1A was transferred to tetraploid and hexaploid lines 10749. |
| Chromosome | 2AS |
| dv | T. monococcum Tm 14087 QCre.pau-1A 10749. |
| Marker associations | QCre.pau-2A was mapped in a 4.00 cM interval flanked by BE498358 and Xwmc358-2A 10749; R[2] =0.1310749. |
Qcre.src-1B was located to the
Xwmc719-1B (R[2] =12%) –
Xgwm140-1B (R[2] =12%) region in Trident/Molineux
10343.
For review
11309.
3.13. Reaction to Magnaporthe spp.⌂ Home
| Synonym | Rwt4 0302 |
| Chromosome | 1D |
| Sources / synonyms | CS (Cheyenne 1D) 10462. |
| v1 | Cheyenne 10462; Norin 26 10462; Shin-chunaga 10462. |
| Varieties (alt.) | Norin 4 Rmg6 {0302, 11470}. c Candidate gene encodes a 916 amino acid protein with a wheat tandom kinase (WTK) domain 11632. Rmg1 was present in 87% of surveyed genotypes 11470. |
RMG2
| Chromosome | 7A |
| i | CS (Thatcher 7A) 10461. |
| Varieties (alt.) | Thatcher Rmg3 10461. |
RMG3
| Chromosome | 6B |
| i | CS (Thatcher 6B) 10461. |
| Varieties (alt.) | Thatcher Rmg2 10461. |
RMG4
| Chromosome | 4A |
| Varieties | Norin 4 10639; Norin 26 10639; Norin 29 10639; P168 10639; Shin-chunaga 10639; T. compactum No. 24 10639. Confers resistance to Digitaria isolate Dig41 at 26C 10639. |
RMG5.
| Chromosome | 6D |
| Sources / synonyms | CS (Red Egyptian 6D) 10639. |
| Varieties | Red Egyptian 10639. Confers resistance to Digitaria isolate Dig41 at 26C 10639. |
RMG6 . TraesCS1D02G029900 .
| Synonym | Rwt3 {11470, 11504} |
| Chromosome | 1DS |
| v1 | Chinese Spring 10948; ShinChunaga 10948, Transfed 11470. |
| Varieties (alt.) | Chinese Spring Rmg9 11504, Norin 4 Rmg1 {10948, 11470}. |
| Marker associations | Xwmc432-1D – 9.6 cM – RMG6 – 6.6 cM – Xwmc222-1D 10948; 11.60 – 11.80 Mb 11632. |
| c | Candidate gene encodes an NRL with 1,069 amino acids (11632}. |
Rmg6 was present in 77% of surveyed genotypes 11470}.
Xwmc432-1D –
RMG9 – 5.0 cM –
RMG6 –
Xwmc222-1D 11504.
A second gene in chromosome 1D designated
Rwt4 0302 (
TraesCS1D02G058900 11632) (was present in CS and Norin 4.
RMG7
| Chromosome | 2AL |
| Type varieties | T. dicoccum KU112 11046; KU120 11046; KU1222 11046. |
| Marker associations | Xcfd50-2A – 5.6 cM – Rmg7 – 15.1 cM – Xhbg327-2A 11083. |
| c | The sequence of Rmg7 was identical to Pm4a 11735. Rmg7 has the same specificity as Rmg8 11735. Rmg7 and Rmg8 recognise the same Avr-Rmg8 effector 11775. |
RMG8
| Chromosome | 2BL |
| Chromosome bin | 2BL6-0.89-1.00. |
| Varieties | S615 11083. |
| Marker associations | Xwmc317-2B – 12.1 cM – Rmg8 – 22.4 cM – Xbarc159-2B 11083. |
| c | The nucleotide sequence of Rmg8 was identical to Pm4f 11735. Rmg8 has the same specificity as Rmg7 11735. According to 11083 markers linked to RMG8 were independent of those linked to RMG7. The Pm4a allele in some accessions is located in chromosome 2B 11735. |
Among
PM4 alleles
Pm4a, Pm4b and Pm4d conferred resistance to both MoT and
Bgt ;
Pm5f conferred resistance to MoT but not
Bgt , and
Pm4f was ineffective against both pathogens
11735.
RmgGR119 confers resistance to the wheat form of the pathogen and its response is enhanced in combination with
Rmg8 11263.
Near-isogenic lines with the T2A-2NS translocation from
Ae. ventricosa displayed reduced levels of spike blast, but there was little effect on seedling leaf blast response
11265:
RMG9
| Note | [ Rwt6 11504. |
| Chromosome | 1D |
v2 Chinese Spring
Rmg6 11504.
RMG10
| Chromosome | 2DS |
| Varieties | Line 6051 (amphiploid Langdon / KU-2097) Permanent genbank accession number needed 11736. |
| dv | Ae. taushii KU-2097 11736. |
| Marker associations | Xbarc-2D – 7.8 cM – Ms-4 – 7.8 cM – RMG10 – 8.3 cM – MS12 – 4.7 cM – Xwmc503-2D 11736. |
RMG11
| Chromosome | 7AS |
| Type varieties | T. dicoccum St19, KU-114 11755. ma IMT5 – 1.0 cM – RMG11 – IMT6/IMT7 – 1.1 cM – Xgwm635 -7A11755. The Rmg11_ resistance remained effective at 30ºC 11755. |
Temporary desigations
| Varieties | GR119 Rmg8 11652. |
| Chromosome | 7BL |
| Type varieties | T. dicoccoides KU109 10949. |
| Marker associations | Xhbg338-7B – 10.5 cM – Rmg7 10949. |
RmgTd(t) was detected with a white culture of an
Avena pathogen isolate backcrossed to a wheat isolate. A virulence to
RmgTd(t) was completely associated with white color of the pathgen isolate
10949. The white color appeared as a mutant variant during backcrossing.
The wheat blast pathogen became established on wheat cultivar Anahuac (
rmg1 rmg6 ) in Brazil in the mid-1980s. It was initially avirulent on cultivars such as IAC-5 with
Rmg6 but later acquired virulence allowing it to attack most wheat genotypes
11470.
3.14. Reaction to Mayetiola destructor (Say) ( Phytophaga destructor ) (Say)⌂ Home
Insect pest: Hessian fly.
H1
| i | Dawson/3[*] Poso, 6179 1087. |
| Varieties (alt.) | Big Club 43 H2 1441; Dawson H2 166, 1087; Poso 42 H2 1441. |
H2
| i | Dawson/3[*] Poso, 6232 1087. |
| Varieties (alt.) | Big Club 43 H1 1441; Dawson H1 166, 1087; Poso 42 H1 1441. |
H3
| Note | Recessive. 5A 1105, 425. Based on the location of H9 on chromosome 1AS, H3 may also be located on chromosome |
| Chromosome | 1AS |
| i | Carol = Newton-207[*] 5/Larned 1107. |
| Varieties | Ace 426; Arthur 426; Becker 749; Cardinal 750; Dual 1273; Frankenmuth 341; Georgia 1123 426; GR855 751; GR876 753; Ike 10252; Ionia 426; Larned 824; Logan 426; Monon 157; Norkan 904; Ottawa 547; Purdue B 36162 A13-12 156; PI 468960 1439; Redcoat 1273; Reed 1273; Riley 1273; Roland 148; Russell 426; Shawnee 547; Titan 747; Todd 426; W38 156. |
| Varieties (alt.) | Clara Fay H6 375. |
| Marker associations | Cosegregation of H3 and a RAPD 296. |
Allan et al.
019 considered that
H3 and
H4 might be allelic. Also suggested by Shands and Cartwright
1317. Linkage of 10.5 +/- 2% involving
H3 and
Pm3a in PI 468960 was attributed to a chromosome 1A/5A translocation
1437.
Recessive. 1AS
11634.
H4 confered resistance to race A, but not to race B.
H5
| Note | Temperature sensitive 1413. |
| Chromosome | 1AS |
| Varieties | Abe 162; Arthur 71 162; Beau 875; Downy 1223; Magnum 10252; Oasis 1109; Ribeiro 1317; Sullivan 1110. |
| Type varieties | Giorgio 331-4 1090; PI 94567-6 1317; PI 94571-14 1317. |
| Marker associations | Cosegregation of H5 and two RAPDs 296. |
H6
| Note | Based on the location of H9 on chromosome 1AS, H6 may also be located on chromosome |
| Chromosome | 1AS |
| Chromosome | 5A |
| i | Erin = Newton-207[*] 7/Arthur 71 1107; Flynn = Newton-207[*] 7/Knox 62 1107. |
| Varieties | Adder 1319; Benhur 426; Caldwell 1421; Compton 1318; CI 12855 19; Excel 752; Fillmore 1106; Knox 62 426; Lathrop 426. |
| Varieties (alt.) | Clara Fay H3 375. |
| Type varieties | Purdue 4835 A4-6 1105. |
| tv2 | PI 94587 H11 H16 19. |
| Marker associations | Cosegregation with three RAPDs 296. |
H7 and H8
| Note | Duplicate factors. H7 is located in chromosome |
| Chromosome | 5D |
| Varieties | Adena 748; Seneca 425,26. |
H9
| Chromosome | 1AS |
| Chromosome | 5A |
| i | Iris = Newton-207[*] 7/Ella 1107. |
| Varieties | Ella 875; Line 822-34 162. |
| Varieties (alt.) | Elva CI 17714 H10 162; Line 812-24 H10 1421; Line 817-2 H10 1421; Stella H10 875. |
| Marker associations | Cosegregation with two RAPDs 296; STS-Pm – 1.7 cM – SOP005 909 – 0.6 cM – Xksu11/Xcnl76/Xgdm3 – 0.5 cM – Xgwm176/Xpsp2999/Xcfa2153-1A – 0.5 cM – Xbarc263-1A – 1.2 cM – H9 - Xwmc24-1A 10231; Xcfa2153-1A – 0.5 cM – H9 – 0.3 cM – Xbarc263-1A 10252. |
H10
| Note | May be identical to H9 10252. |
| Chromosome | 1AS |
| Chromosome | 5A |
| i | Joy = Newton207[*] 3/IN76529A5-3-3 1107. |
| Varieties | IN76529 875. |
| Varieties (alt.) | Elva CI 17714 H9 162; Line 817-2 H9 162; Stella H9 875. |
| Marker associations | Cosegregation with one RAPD and close linkage to another RAPD 296; Xcfa2153-1A – 0.5 cM – H10 – 1.3 cM – Xbarc263-1A 10252; Xrapd9-2-1000/Xpsp29991A/Xgps7072-1A – 2.2 cM – H10 10252. |
H11
| Chromosome | 1A |
| Chromosome | 1AS |
| i | Karen = Newton-207[*] 4/IN916-1-3-1-47-1 1107. |
| Varieties | Kay 875,375; Line 916 1422; Line 920 1422; Line 941 1422. |
| tv2 | T. turgidum PI 94587 H6 H16 1422. |
| Marker associations | Close linkage with two RAPDs296; Xcfa2153-1A – 0.3 cM – H11 1.7 cM – Xbarc3631A 10252. |
H12
| Chromosome | 5A |
| i | Lola = Newton-207[*] 4/Luso 1107. |
| Varieties | Luso 1092. |
| Marker associations | Cosegregation with one RAPD and close linkage of H12 to another RAPD 296. |
H13
| Chromosome | 6DS |
| Chromosome | 6DL |
| i | Molly = Newton-207[*] 7/3/KU221-19/Eagle/ KS806 1107. |
| Varieties | AGS 2010 11008; AGS 2026 PI 658065 11008; KS81H1640HF 441; Oglethrope PI 657986 11008; PI 562619 10388; SW34=Langdon/ Ae. tauschii RL 5544 10388; T. turgidum var. durum cv. Gulab KU 134/ Ae. tauschii KU 2076, KU 221-14 525; T. turgidum var. persicum straminium KU 138/ Ae. tauschii KU 2076, KU221-19 525. |
| dv | Ae. tauschii KU 2076 525. |
| Marker associations | Cosegregation with a RAPD296; Xgdm36-6D – 2.7 cM – H13/Xcfd132-6D – 1.1 cM – Xcfd213-6D 10251; Xcfd132-6D – 3.7 cM – H13 10388. |
H14
| Chromosome | 5A |
| Type varieties | IN 81601A2-3-3 875. |
| tv2 | ELS 6404-160 H15 875. |
| Marker associations | Cosegregation with a RAPD 296. |
H15
Based on the location of
H9 on chromosome 1AS,
H15 may also be located on chromosome 1AS
10231.
H16
| Chromosome | 5A |
| Chromosome | 1AS |
| Chromosome bin | 1AS-3-0.86-1.00. |
| Varieties | P921682 11058. |
| Type varieties | IN 80164H5-2-9 1106; N80164 1097. |
| tv2 | PI 94587 H6 H11 1106. |
| Marker associations | Cosegregation of H16 and a RAPD296; Xpsp2999-1A – 3.7 cM – H16 – 5.5 cM – Xbarc263/Xwem6B-1A 11058. |
H17
| Chromosome | 5A |
| Chromosome | 1AS |
| Chromosome bin | 1AS-3-0.86-1.00. |
| Varieties | P921680 11058. |
| Type varieties | PI 428435 1090. |
| Marker associations | Cosegregation of H17 and a RAPD 296; Xpsp2999-1A – 6.27 cM – H17 – 5.1 cM – Xbard263/Xwem6B-1A 11058. |
H18
H19
| Type varieties | PI 422297 1089; This germplasm possesses a second gene which is allelic or closely linked with H16 1089; IN84702 1097. |
| tv2 | PI422297 H29 1097. |
H20
| Chromosome | 2B |
| Type varieties | Jori 25. |
| Note | 2B 383 = |
| Chromosome | 2BS |
H22
| Chromosome | 1D |
| Chromosome | 1DS |
| Varieties | KS86WGRC1 1199; KS85WGRC01= Ae. tauschii TA1644/Newton//Wichita 1199; PI 572542 10388. |
| Marker associations | Xgdm33-1D – 1.0 cM – H22 – 0.3 cM – Xhor2KV-1D – 0.5 cM – Xgpw7082-1D 10381. |
H23
| Chromosome | 6DS |
| Chromosome | 6DL |
| Chromosome | 6D |
| Varieties | KS89WGRC03 = TA1642 / 2*Wichita 10251,442; PI 535766 10388. |
| al | Ae. tauschii TA1642 10251. |
| Marker associations | H23 – 6.9 cM – XksuH46D 861; Maps to same region as H13 10262. |
H24
| Chromosome | 6DL |
| Chromosome | 3D |
| Varieties | KS89WGRC6 442; PI 535769 10388. |
| Marker associations | H24 – 5.9 cM – Xbcd451-6D/Xcdo482-6D 861. |
H25
| Note | 6B384 = T |
| Chromosome | 6BS |
H26
| Chromosome | 4D |
| Chromosome | 3DL |
| Chromosome bin | 3DL3-0.81-1.00. |
| Varieties | KS92WGRC26 217; SW8 = Langdon/ Ae. tauschii CIae 25 10388. |
| dv | Ae. tauschii TA2473 217. |
| Marker associations | Xcfd211-3D – 7.5 cM – H26 – 2.9 cM – Xwgc7330-3D – 4.0 cM – Xgwm3-3D 10388. Xrwgs-3D – 3.2 cM – H26/Xrwgs11-3D – 1.0 cM – Xrwgs12-3D 10846. |
H26 is very close to
H32 10846.
H27
| Chromosome | 4M |
| su | H-93-33 235. |
| al | Ae. ventricosa No. 10 235; Ae. ventricosa No. 11 235. |
H28
| Note | 5[A] 171. |
| Type varieties | PI 59190 171. |
H29
| Synonym | H27 171 |
| Chromosome | 5A |
| Type varieties | PI422297 H19 1097. |
H30
| Note | Derived from Ae. triuncialis 0256. |
| Varieties | TR-3531 256. |
| al | Ae. Triuncialis 256. |
H31
| Chromosome | 5BS |
| Varieties | P961696332. |
| Type varieties | CI 3984332. |
| Marker associations | STS marker Xupw4148-5B – 3 cM – H31 332. |
| Chromosome | 3DL |
| Chromosome bin | 3DL3-0.81-1.00. |
| Varieties | Synthetic W7984 10137. |
| Marker associations | Xgwm3-3D – 1.7 cM – H32 – 1.7 cM – Xcfd-3D 10137; Xrwgs10-3D – 0.5 cM – H32/Xrwgs11-3D – 0.5 cM – Xrwgs12-3D 10846. KASP markers developed 11633. H32 is very close to H26 10846. |
H33
| Chromosome | 3AS |
| Varieties | Line 97211 10954. |
| Type varieties | PI 134942 10954. |
| Marker associations | Xgwm218-3A – 10 & 7 cM – H33 – 28 & 25 cM – Xhbg-3A 10954. |
H34
| Synonym | Qhf.hwwg-6B 11018 |
| Chromosome | 6BS |
| Varieties | Clark 11018. |
| Marker associations | Flanked by Xsnp9216B and Xsnp2745-6B within a 4.5 cM region, R[2 ] = 0.38-0.42 11018. |
Halotype analysis was used to postulate
Ae. tauschii -derived genes
H13, H22, H23, H26 and
H32 in a set of synthetic wheat lines
10983.
H35 in chromosome arm 3BS and
H36 in chromosome arm 7AS were named for one major and one minor QTL in common wheat line SD06165
11512.
Temporary designations:
| Chromosome | 1AS |
| Varieties | KS99WGRC42 10262. tv T. dicoccum PI 94641 10262. |
| Marker associations | Xcfa2153-1A – 1.4 cM – Hdic – 0.6 cM – Xgwm33-1A 10262. |
| Synonym | Hf-NC09MDD14 10844 |
| Chromosome | 6DS |
| Varieties | NC09MDD14 PI 656395 10843. |
| dv | Ae. tauschii TA2492 and/or TA2377 10843. |
| Marker associations | Xgdm36-6D – 1.5 cM – HNC09MDD14/Xcfd123-6D 10843; HNC09MDD12 could be allelic to, but is different from, H13 10843. |
| Chromosome | 6AL |
| Chromosome bin | 6AL8-0.90-1.00 11008. |
| Varieties | 26R61 PI 612153 11008. |
| Marker associations | Mapped as a QTL (R[2] =0.63) flanked by Xgwm427-6A and wPt-731936 11008. |
| Chromosome | 6DS |
| Varieties | KS89WGRC04 = TA 1695 / 3*Wichita 10251. |
| Marker associations | Allelic with H13 10251. |
A recombination value of 12.0% between leaf-rust reaction {possibly
Lr10 } and Hessian-fly reaction in Selection 5240 was reported
018.
| Chromosome | 1AS |
| Varieties | Clark H34 11018. |
| Marker associations | Closely linked to Xwgm33-1A 11018; Located within a 6 cM region flanked by Xwgm33-1A and Xsnp5150-6B , R[2] =0.1 11018. |
| Chromosome | 6BS |
| Varieties | Chokwang 11635. |
| Marker associations | Located to interval 6BS 6.029 – 10.779 Mb (CS RefSeq v2.0) 11635. KASP markers developed 11635. |
| Chromosome | 6BS |
| Varieties | Chokwang 11635. |
| Marker associations | Located to interval 6BS 6.029 – 10.779 Mb (CS RefSeq v2.0) 11635. KASP markers developed 11635. |
| Note | Putatively derived from T. dicoccum 11510. |
| Chromosome | 2AL |
| Marker associations | Linked with Ax94980581I 11510. |
| Chromosome | 5BS |
| Type varieties | DWHF01 11510. Possible overlap with H31 11510. |
| Chromosome | 6BS |
| Type varieties | T. timopheevii subsp. ameniacum derivatives: DWHF02 11510; Chaoui 11510; Icamoram7d {11510; Marouane 11510; Nassira 11510. |
| Marker associations | Linked with Ax95181449 11510. |
Duster (R) / Billings: DH population:
QHf.osu.1A.2 (Syn.
QHf.osu-1A[d] ), R[2] = 0.88, delimited to a 2.7 cM region flanked by
GBS07851 and
GBS10205 11324. This was a distinct locus 11.2 cM proximal to
QHf.osu.1A .
Jagger (S) / 2174 9 (R): RIL population:
QHf.osu-1A (Syn.
Qhf.osu[74] (R[2] = 0.70) and
QHf.osu-2A (R[2] = 0.18)
11325. The QTL in chromosome 1A appeared to be co-linear with several previously named
H genes in tetraploid wheat; the gene in 2A was in repulsion with the 2N segment present in Jagger
11325.
Mayetiola-destructor susceptibility gene-1
| Note | [ Mds-1 ] 11327. |
| Chromosome | 3AS |
| Varieties | No allelic variation demonstrated. |
| c | EST CD453475, GenBank JN162442; Mds-1A encodes a 151 amino-acid protein with 96% identity with HSP16.9 11327. Homoeologues are present in chromosomes 3B and 3D. Silencing of Mds-1 expression caused immunity in otherwise FHB-susceptible genotypes 11327. |
RKN1
| Synonym | Rkn 632 |
| Chromosome | 6D |
| dv | Ae. tauschii G3489. |
| Varieties | Prosquare, a synthetic hexaploid of Produra/ Ae. tauschii G3489 632. |
RKN2
| Note | Derived from Ae. peregriina (variabilis) 1621. |
| Synonym | Rkn-mn1 1621 |
| Chromosome | 3B |
| Varieties | X8 = CS/ Ae. peregrina No. 1//Rescler/3/Lutin 1620; X35 {1620, 1621}. |
| Marker associations | Co-segregation with RAPD OpY16 1065 and close linkage with several markers including Est-B5 103; converted to SCAR Y16 |
10486; May be the same as
CreY (see reaction to
Heterodera avenae ) on chromosome 3S[V] from
Ae. variabilis translocated to 3BL
10800.
RKN3
| Note | Derived from Ae. ventricosa 2NS translocation into |
| Chromosome | 2AS |
| Varieties | VPM1, Lassik (PI 653535) 10801. |
| Marker associations | Resistances to M. javanica and M. incognita mapped to the 2NS translocation in BC6F3 near isogenic lines of Anza (PI 638742), Yecora Rojo, and Express with the 2NS translocation 10801. |
3.16. Reaction to Mycosphaerella graminicola (Fuckel) Schroeter, Zymoseptoria tritici⌂ Home
Disease: Septoria tritici blotch
STB1
| Synonym | Slb1 1586 |
| Chromosome | 5BL |
| Chromosome bin | FL 5BL-11 - 5BL-14 10123; |
| Varieties | Bulgaria 88 1586; Oasis 1586; P881072-75-1 10123; SO852 10123; Sullivan 1586. |
| Marker associations | Close linkage with 2 RAPD markers at >0.68 and 1.4 cM in P881072-75-1 10123; Cent..... Xbarc74-5B – 2.8 cM – Stb1 10123. |
STB2
| Synonym | Slb2 1586 |
| Chromosome | 1BS |
| Chromosome | 3BS |
| Varieties | Nova Prata 1586; Veranopolis 1586. |
| Marker associations | Xgwm389-3B/Xgwm533-3B – 1.0 cM – Stb2 – 3.7 cM – Xgwm493-3B 10105; Stb2 is neither on 3BS nor linked with Xgwm389-3B 10976; Xwmc406-1B – 6.0 cM – Stb2 – 5.0 cM – Xbarc008-1B 10976. |
STB3
| Synonym | Slb3 1586 |
| Chromosome | 7AS |
6D,
10105 (according to
10556 this location is not correct.
STB4
| Chromosome | 7DS |
| Chromosome | 7D |
| Varieties | Cleo 1410; Gene 10010; Tadinia 10140,1410; Tadorna 1410. |
| Marker associations | XAGG/CAT10 – 4.0 cM – Stb4 – 0.7 cM – Xgwm111-7D – 1.4 cM – XATCG/CAAA5 .......Cent 10140; Stb4 – 0.7 cM – Xgwm111-7D 10140. Stb4 segregated independently of Stb1 but its relationship with Stb2 and Stb3 is unknown. Genetic analysis of Tadinia indicated single gene segregation (assumed to be Stb4 ) with a Californian culture but a different single gene segregated with South American isolates 10140. |
STB5
| Note | Identified using M. graminicola IPO94269 0186. Derived from Ae. tauschii accession 37-1 0186. |
| Chromosome | 7DS |
| Varieties | Baldus 11446; Bezostaya 0187; Chaucer 11446; Hereward |
STB6
| Note | Confers resistance to M. graminicola isolate IPO323 but not to isolate IPO94269 0187. |
| Synonym | TaWAKL 4 11434 |
| Chromosome | 3AS |
| Varieties | Amigo 10448; Arina 10448; Amada 10448; Atlas 66 10448; Ble Seigle 10448; Bon Fermier 10448; Cadenza 11434; Chinese Spring 10448; Bezostaya 1 10495; Flame {187, 11434}; Gene 10448; Heines Kolben 10448; Hereward 10448; Poros 10448; Senat 10448; Shafir 10448; Tadinia 10448. |
| Varieties (alt.) | Bulgaria 88 Stb1 10448; Israel 493 Stb3 10448; Kavkaz-K4500 Stb7 Stb10 Stb12 10011; TE9111 Stb7 Stb11 10012; Veranopolis Stb2 10448. tv Stb6 is common in T. dicoccum 11434. |
| Marker associations | A resistance gene from Senat located at or near the Stb6 locus was mapped 5 cM from microsatellite Xgwm369-3A on chromosome arm 3AS 10067; Xgwm369-3A – 4.3 cM – Stb6 – 3.8 cM – Xgwm132-3A 11434. |
| c | Encodes a wall-associated receptor kinase (WAK)-like protein 11434. |
STB7
| Chromosome | 4AL |
| Varieties | ST6 = Estanzuela Federal. |
| Varieties (alt.) | Kavkaz-K4500 Stb6 Stb10 Stb12 10011; TE9111 Stb6 Stb11 10012. |
| Marker associations | Xwmc219-4A – 0.8 cM – Xwmc-4A – 0.3 cM – Stb7 0311; Stb7 was closer to Xwmc313-4A than to Xwmc219-4A 10011. |
STB8
| Chromosome | 7BL |
| Varieties | Synthetic hexaploid W7984 (parent of ITMI population) 0326. |
| Marker associations | Xgwm146-7B – 3.5 cM – Stb8 – 5.3 cM – Xgwm577-7B 0326. |
STB9
| Note | Culture IPO89011 |
| Chromosome | 2BL |
| Varieties | Courtot 10027; Tonic 10027. |
| Marker associations | Xfbb2262B – 3 cM – Stb9 – 9 cM – XksuF1b-2B 10027. |
STB10
| Note | Confers resistance to cultures IPO94269 and ISR8036, but not to IPO87019 10011. |
| Chromosome | 1D |
| Varieties (alt.) | Gene Stb5 11446; Frontana Stb5 11446; Kavkaz-K4500 L.6.A.4 Stb6 Stb7 Stb12 = JIC.W9995 10011; Mentana Stb5 11446. |
| Marker associations | Associated with Xgwm848-1D 10011. |
STB11
| Note | Confers resistance to isolate IPO90012 10012. |
| Chromosome | 1BS |
| Varieties | JIC W 9996; TE9111. |
| Varieties (alt.) | TE9111 Stb6 Stb7 10012. |
| Marker associations | Distal to Xbarc008-1B 10012. |
STB12
| Note | Confers resistance to cultures ISR398, ISR8036 and IPO87019 10011. |
| Chromosome | 4AL |
| Varieties (alt.) | Kavkaz-K4500 Stb6 Stb7 Stb10 10011. |
| Marker associations | Stb12 was closer to Xwmc219-4A than to Xwmc3134A 10011. |
STB13
| Note | Confers resistance to Canadian cultures MG96-13 and MG2 10347 |
| Chromosome | 7BL |
| Varieties | DH line 90S05B*01 10347; DH line 98S08C*03 10347. |
| Varieties (alt.) | Salamouni Stb14 10347. |
| Marker associations | Xwmc396-7B – 9 cM – Stb13 10347; Xwmc396-7B – 7 cM – Stb13 10347. |
STB14
| Note | Confers resistance to Canadian isolate MG2 but not to MG96-13 10347 |
| Chromosome | 3BS |
| Varieties | DH line 98S08A*09 10348. |
| Varieties (alt.) | Salamouni Stb13 10347. |
| Marker associations | Xwmc500-3B – 2 cM – Stb14 – 5 cM – Xwmc623-3B 10348. |
STB15
| Note | Confers resistance to Ethiopian culture IPO88004 10341 |
| Chromosome | 6AS |
| Varieties | Riband 10341. |
| Varieties (alt.) | Arina Stb6 10341. |
| Marker associations | Stb15 – 14 cM – Xpsr904-6A 10341. |
STB16
| Note | Seedling and adult plant resistance |
| Synonym | Stb16q 10879 |
| Chromosome | 3DL |
| Varieties (alt.) | Synthetic W- 7976 Stb17 10879. |
| Marker associations | Associated with Xgwm494-3D and mapped as a QTL, R[2] =0.4-0.7 in seedling tests and 0.28-0.31 in mature plants 10879. |
STB17
| Note | Adult plant resistance |
| Chromosome | 5AL |
| Varieties (alt.) | Synthetic W-7976 Stb16 10879. |
| Marker associations | Associated with Xhbg247-5A and mapped as a QTL, R[2] =0.12-0.32 10879. |
STB18
| Note | Confers resistance to IPO0323, IPO98022, IPO98046 10827 |
| Chromosome | 6DS |
| Varieties (alt.) | Balance Stb6 Stb11 10827. |
| Marker associations | Mapped as a QTL located in a 8.8 cM region spanned by Xgpw30876D and Xgpw5176-6D 10827. |
STB19
| Note | Derived from synthetic wheat. |
| Chromosome | 1DS |
| Varieties | Lorikeet 11360. |
| Marker associations | KASP markers snp4909967 and snp1218021 11360. |
See {11332, 11361} for reviews.
Temporary designation
| Note | Resistance to IPO323. |
| dv | T. monococcum MDR043 11446. |
QTL
Four QTLs for resistance to
Mycosphaerella graminicola were identified in replicated field experiments in a double haploid population from
Savannah (susceptible)/Senat (resistant) . Senat contributed all the alleles providing resistance
10067.
QStb.riso-2B was mapped on chromosome arm 2BL linked to SSR marker
Xwmc175-2B (LOD>5, R[2] >17%)
10067.
QStb.riso-3A.2 was mapped on chromosome arm 3AS linked to SSR markers
Xwmc489-3A, Xwmc3883A and
Xwmc505-3A (LOD >4, R[2 ] >18%). Also detected at the seedling stage
10067.
Xgwm369-3A is present on chromosome arm 3AS
0187. A resistance gene from Senat located at or near the
STB6 was mapped 5 cM from
Xgwm369-3A on chromosome arm 3AS
10067.
QStb.riso-6B was mapped on the centromeric region between SSR markers
Xwmc494-6B and
Xwmc3416B (LOD >16, R[2 ] >68%). Also detected at the seedling stage
10067.
QStb.riso-7B was mapped on chromosome 7B close to SSR marker
Xwmc517-7B (LOD>4, R[2 ] >11%)
10067.
ITMI Population: Three QTL,
QStb.ipk-1DS, QStb.ipk-2DS and
QStb.ipk-6DS conferred seedling-stage resistance to 2 isolates, whereas 2 QTL
QStb.ipk-3DL and
QStb.ipk-7BL conferred separate adult-stage resistances to each isolate
10151.
A weak QTL,
QStb.psr-7D.1 , giving partial resistance to Portuguese isolate IPO92006, was detected in the
Xcdo475b-7B - Xswm5-7B region in chromosome 7DS
10341.
Apache / Balance: Analyses with a panel of
M. graminicola cultures identified QTLs on chromosomes 1BS (Apache, considered to be
Stb11 ), 3AS (Balance, considered to be
Stb6 ), 6DS (Balance, named as
Stb18 ), 7DS (Apache, considered to be
Stb4 ) and 7DL (Apache)
10827.
Florett / Biscay (S): RIL population: two QTLs for APR were located on chromosomes 3B and 6D
10901.
Solitar (R) / Mazurka (S): DH population: Resistance under field conditions was associated with QTL on chromosomes 5A, 6D and 7D which accounted for 20% of the genotypic variation; all three were derived from Solitar, but there was no evidence that
Stb6 and
Stb11 , also present in Solitar, were involved
10984.
Spelt HRTI1410 (R) / three wheat parents: 135 DH lines: mapped using SNP polymorphisms common to all three S parents: four QTL identified on chromosome 5AL (74.2 – 82.4 cM; r[2] = 0.18); 4B (52.9 –
56.9 cm, r[2] = 0.09) contributed by the susceptible parents; and 7B.1 (41.2 – 57.0 cM, r[2] = 0.09), and 7B.2 (58.2 – 67.4 cM, r[2] = 0.15) contributed by the susceptible parents
11430.
Steele-ND (R) / ND735 (S): RIL population: A consistent QTL (R[2] =0.1) for seedling resistance flanked by DArT markers
XwPt-7101 and
X377410 was mapped to chromosome 5BL in the region of
Stb1 10992. Two other QTLs on chromosomes 1D and 7A were detected in single experiments
10992.
Tuareg / Biscay (S): RIL population: two QTLs for APR were located on chromosomes 4B and 6B
10901.
For a review of qualitative and quantitative resistance
11439.
3.17. Reaction to Phaeosphaeria nodorum (E. Muller) Hedjaroude (anamorph: Stagonospora nodorum (Berk.) Castellani & E.G. Germano); Parastagonospora nodorum⌂ Home
Disease: Septoria nodorum blotch, Stagonospora nodorum blotch.
SNB1
| Chromosome | 3AL |
| Varieties | Red Chief 856. |
| Varieties (alt.) | EE8 Snb2 856. |
SNB2
| Chromosome | 2AL |
| Varieties (alt.) | EE8 Snb1 856. |
SNB3
| Chromosome | 5DL |
| Sources / synonyms | CS[*] /Synthetic 5D 1594. |
| Varieties | Synthetic 1594. |
| dv | Ae. Tauschii 1594. |
QTL
A QTL analysis of SNB response in the
ITMI population found significant effects associated with chromosome 1B (probably
Snn1 ) and 4BL, with an interactive effect involving the 1BS region and a
marker on chromosome 2B
10009. An additional QTL on 7BL was effective at a later stage of disease development
10009.
Arina / Forno: RIL population
10065. Two QTLs for glume blotch resistance under natural infection were identified on chromosomes 3BS and 4BL in.
QSng.sfr-3BL was associated with marker
Xgwm3893B and explained 31.2% of the variation with resistance contributed by Arina
10065. The 4BL QTL,
QSng.sfr-4BL , was associated with
Xgwm251-4B and explained 19.1% of the variation. Resistance was contributed by Forno
10065. A QTL on 5BL,
QSng.sfr-5BL , overlapped with QTLs for plant height and heading time
10065.
QSng.sfr-3BS peaked 0.6 cm proximal to
Xsun2-3B 10465. Association mapping involving 44 modern European cultivars indicated that the association was retained in a significant proportion of genotypes
10465.
Br34 / Grandin: Three QTLs with resistance effects from BR34;
Qsnb.fcu-5BL.1 (
Tsn1 ), R[2] = 0.63,
Qsnb.fcu5BL.2, R[2] = 0.06, and
Qsnb.fcu-1BS (vicinity of
Snn1 ), R[2] = 0.10
10458. QTL analysis of the RIL population with Culture Sn6 revealed four QTLs,
Qsnb.fcu-2DS (R[2] = 0.3 - 0.49) associated with
Snn2 ,
Qsnb.fcu-5BL (R[2] = 0.14 - 0.2) associated with
Tsn1, Qsnb.fcu-5AL (R[2] = 0 - 0.13) associated with
Xfcp13-5A , and
Qsnb.fcu-1BS (R[2] = 0 - 0.11) associated with
Xgdm125-1BS 10507.
Forno (S) / Oberkulmer spelt (R): Among 204 RILs leaf and glume response were genetically different but correlated (R[2] =0.52). Ten QTLs for glume blotch (SNG) resistance were detected, 6 from Forno. A major QTL (R[2] =35.8%) was associated with q. Eleven QTLs (4 from Forno) affected leaf blotch; 3 of these (chromosome 3D, 4B and 7B) with R[2] >13% were considered potential candidates for MAS
10250.
HRWSN125 (R) / WAWHT2074 (S): Constant detection of
QSnl.daw-2DL for flag leaf resistance, and
QSng.daw-4BL for glume resistance over two years
10584.
ITMI population: A major QTL, coinciding with
Snn1 , was located in chromosome 1BS (R[2] = 0.58, 5 days after inoculation), minor QTL were found in 3AS, 3DL, 4AL, 4BL, 5DL, 6AL and 7BL
10009. P91193D1 (partially resistant) / P92201D5 (partially resistant) RIL populations were tested in Indiana and Western Australia for glume resistance. Two QTL were identified:
Qng.pur-2DL.1 from P91193D1 (R[2] = 12.3 in Indiana and 38.1% in WA, respectively;
Xgwm526.1-2D - Xcfd50.2-2D ) and
QSng.pur2DL.2 from P99201D5 (R[2] = 6.9% and 11.2%, respectively;
Xcfd50.3-2D - wPT9848 )
10471.
Liwilla / Begra: DH population: Four QTLs, on chromosomes 2B (proximal part of long arm), 3B (distal part of short arm), 5B and 5D. A longer incubation period and lower disease intensity were contributed by Liwilla
10045. A QTL,
QSnl.ihar-6AL , identified in DH lines of Alba (R) / Begra (S) accounted for 36% of the phenotypic variance in disease severity and 14% of the variance in incubation period
10143.
Salamouni/Katepwa: RIL population: Two QTLs.
QSnb.fcu-1A (
Snn4 ) (R[2] =0.24) and
QSnb.fcu-7A (R[2] =0.16) were associated with SNB response to isolate Sn99CH 1A7a
10867.
## Tetraploid wheat
Langdon / Langdon ( T. turgidum ssp. dicoccoides Israel-A 5B): QSnb.ndsu-5B located 8.3 cM proximal to
tsn1 for tan spot resistance; R[2] = 0.38
10597.
A summary of QTL analyses is provided in
10726.
TSN1
| Note | Sensitive to SnToxA, which is functionally identical to Ptr ToxA 10459. |
| Varieties | Cheyenne 7; Forno 10725; Hope 7; Jagger 7; Kulm {10458, 10030, 346}; ND495 7; Timstein 7; Trenton 315. |
| dv | Two Ae. speltoides accessions 10756. |
| Type varieties | Langdon 10458; Some T. dicoccoides accessions 10756. |
| c | Tsn1 has 8 exons and a S/TPK-NBS-LRR structure; all three domains are required for function and TSN1 protein does not interact directly with ToxA 10756. See reaction to Pyrenophora tritici repentis 10458. |
tsn1 10207,
346. Insensitivity (disease resistance) is recessive
346. 5BL
346.
SNN1
| Note | TaWAK 11341. Sensitivity to SnTox1 is dominant 10008 |
| Chromosome | 1BS |
| Chromosome bin | 1BS.sat.18. |
| Sources / synonyms | CS-DIC 1B 10008. |
| Varieties | CS 10008; Grandin 10008; Kulm 10008; M-6 10960; ND495 10008. |
| Marker associations | Snn1 – 4.7 cM – XksuD14-1B 10008; XksuD14.2-1BS – 0.4 cM – Snn1/XBE498831/XBF474204 – 0.4 cM Xpsp3000-1BS/XBE422980/XBE637568/ZBE605202 10727; |
XksuD14.2 **–
SNN2
| Note | Sensitivity to SnTox2 is dominant 10507. |
| Chromosome | 2DS |
| Varieties | BG223 10507. |
| Varieties (alt.) | Grandin Tsn1 Snn3 10507. |
| Marker associations | Xgwm614-2D **– |
SNN3
SNN4
| Note | Sensitivity to SnTox4 is dominant 10725 |
| Chromosome | 1AS |
| Chromosome bin | 1AS3-0.86-1.00 10725. |
| Varieties | Arina 10725; Katepwa 10867; Salamouni 10867. |
| Marker associations | XBG262267/ **– |
SNN5
| Chromosome | 4BL |
| Chromosome bin | 4BL5-0.85-1.00. |
| Type varieties | T. carthlicum PI 94749 10925. |
| tv2 | Lebsock Tsn1 Snn3-B1 11203. |
| Marker associations | Xbarc163/Xcfd-4B **– |
SNN6
| Chromosome | 6AL |
| Varieties | Opata 85 11206; RIL ITMI137 11206. |
| Marker associations | Flanked by XBE424987 and XBE403326 11206. |
snn6 . v: Synthetic W-7984
11206.
SNN7
| Note | Sensitive to SnTox7. |
| Chromosome | 2DL |
| Chromosome bin | 2DL-9-0.75-1.00. |
| Varieties | Timstein 11292. |
| Marker associations | Xcdf267-2D – 2.3 cM – Xgdm6-2D – 0.9 cM – Snn7/Xcfd44-2D – 1.8 cM – Xgwm349-2D – 11.3 cM – Xgwm311-2D 11292. |
| Varieties | Identified in the UK MAGIC population 11133. |
ITMI population: A major QTL, coinciding with
Snn1 , was located in chromosome 1BS (R[2 ] = 0.58, 5 days after inoculation), minor QTLs were found in 3AS, 3DL, 4AL, 4BL, 5DL, 6AL and 7BL
10009.
P91193D1 / P92201D5: RIL population: tested in USA and Australia:
QSng.pur-2DL.1 from P91103D1, R[2] =0.123 (Indiana) and 0.381 (South Perth); and
QSng.pur-2DL.2 from P92201D5, R[2] =0.069 (Indiana) and 0.112 (South Perth)
10776.
Host sensitivity genes in US southern winter wheats are listed in
1241.
3.18. Reaction to Pratylenchus spp.⌂ Home
Root lesion nematode; prats
RLNN1
| Chromosome | 7AL |
| Varieties | Excalibur 0121; Krickauff 0121. |
| Marker associations | Mapped between markers Xpsr121-7A and Xgwm344-7A and 9 cM proximal to Lr20 0374. |
3.19. Reaction to Puccinia coronata var. hordei .⌂ Home
CR1
| Chromosome | 5DL |
| Varieties | Chris CItr 14108 10956. |
| Marker associations | Xwmc41.2-5D **– |
3.20. Reaction to Puccinia graminis Pers.⌂ Home
Disease: Black rust; black stem rust; stem rust.
Note: Some near-isogenic lines are based on Marquis. The genes present in the Marquis background are not listed for those NILs.
SR2
| Note | Recessive allele. Adult plant response. |
| Chromosome | 3BS |
| Sources / synonyms | CS[*] 6/Hope 3B 499. |
| Varieties (alt.) | HD2009 Sr30 10632; Warigo Sr7b Sr17 499; Suneca Sr8a Sr17 485; Hopps Sr9d 499; Lancer Sr9d Sr17 679; Scout Sr9d Sr17 679; See also 1040,499. |
| Marker associations | Xgwm389-3B **– |
SR3 & SR4
| Varieties | Marquillo - based on early data. No stocks for the individual genes available. |
SR5
| Note | 6D 1308, 939, 1626. |
| Chromosome | 6DS |
| i | I Sr5 -Ra 828; I Sr5 -Rb 828; Sr5/7[*] LMPG 685; Thatcher/10[*] Marquis 686. |
| Sources / synonyms | CS[*] 6/Thatcher 6D 1308. |
| Varieties | Admonter Fruh 72; Dacia |
979; Dong-Fang-Hong 2
564; Dong-Fang-Hong 6
564; Feng-Kong
563; Hochzucht
46; Hybrid 80-3
72; Jubilejna
68; Juna
76; Kanred
1308; Ke-Fang 1
564; Stabil
72; Viginta
71; Vrakunski
72.
SR6
| Synonym | SrKa1 1167 |
| Chromosome | 2D |
| Chromosome | 2DS |
| Chromosome bin | 2DS5 - 0.47 - 1.00 10714. |
| i | I Sr6 -Ra 828; Kenya 58/10[*] Marquis {675, 468}; Sr6/9[*] LMPG 685. |
| Sources / synonyms | CS[*] 5/Red Egyptian 2D 1308. |
| Varieties | Africa 43 669; Eureka {468, 844}; Kenya stocks {1167, 669, 1557, 687, 673, 670, 689}; McMurachy 679; Shield 198. |
| Varieties (alt.) | Bowie Sr8a 1553; Eurga Sr11 1553; Fortuna Sr7a 679; Gamut Sr9b Sr11 1555; Glenlea (heterogeneous) Sr5 Sr9b 327; Kentana 52 Sr7a {1577, 678}; Kiric 66 Sr7b 979; Lerma Rojo 64 Sr7b Sr9a 979; No. 466 Sr9b Sr10 689; Red Egyptian Sr8a Sr9a 1308, 687; Siete Cerros Sr11 33; Victor I Sr5 Sr8a 979. |
| Marker associations | Sr6 **– |
| Synonym | Sr7 687 |
| i | Egypt Na101/6[*] Marquis 468; Kenya 117A/6[*] Marquis 468; Sr7a/9[*] LMPG 685. |
| Sources / synonyms | CS[*] 7/Kenya Farmer 4B 830; CS[*] 8/Sapporo 4B 830. |
| Varieties | Egypt Na101 669; Jagger Sr38 11420; Kenya stocks669, 687, 673, 670, 689; Sapporo Haru Komugi Ichigo 689. |
| Varieties (alt.) | Egypt Na95 Sr9b Sr10 687; Fortuna Sr6 679; French Peace Sr9a Sr13 680; Kentana 52 Sr6 689; Khapstein Sr13 Sr14 674; W3746 Sr12 1371. |
| Marker associations | Xwmc313-4A – SNP1067 – 0.8 cM – Sr7a – 2.7 cM – Xbarc78-4A – 2.7 cM – SNP7126 11420. |
| i | I Sr7b -Ra 828. |
| Varieties (alt.) | Warigo Sr2 Sr17 499; Kiric 66 Sr6 979; Roussalka Sr8a 979; Red Bobs Sr10 308; Nell Sr17 1565; PI 177906 Sr28 SrTmp 11419; Spica Sr17 939; Marquis Sr18 Sr19 Sr20 675, 830. ma Located at 147-164 Mb in the Wang et al. (2014) consensus map 11419. |
| Synonym | Sr8 687 |
| i | I Sr8a-Ra 828; Red Egyptian/10[*] Marquis 686; Sr8a/9[*] LMPG 685. |
| Sources / synonyms | CS[*] 5/Red Egyptian 6A 1308. |
| Varieties | Harvest 11418; Marimp 3 979; Mentana 844; Strampelli 979. |
| Varieties (alt.) | An-Hewi II Sr5 564; E-Gan-Zao Sr17 564; Erythrospermum 974 Sr5 72; Frontana b 689; Golden Valley Sr17 979; Hartog Sr2 Sr12 127; Magnif G Sr9b 689; Pitic 62 Sr9b 33; PI 177906 Sr7b SrTmp 11419; Red Egyptian Sr6 Sr9a 687; Rio Negro Sr9b 689; Roussalka Sr7b 979; SD4297 Sr28 11418; Suneca Sr2 Sr17 485; Victor 1 Sr5 Sr6 979. |
| Marker associations | Terminally located; SNP markers within 2 cM 11416. Sr8a – 2.2 cM – Xgwm459-6 A 11418. |
| Synonym | SrBB |
| Varieties | Barleta Benvenuto 1368; Klein Titan 1368. |
| Varieties (alt.) | Bezostaya Sr5 979; Klein Cometa Sr30 1368. |
| Type varieties | According to Luig 841 one of the genes in Leeds is Sr8b . |
| tv2 | Arrivato Sr9e Sr13 10607. |
| Marker associations | Sr8b **– |
| Synonym | Sr9 687 |
| i | I Sr9a -Ra 828; Red Egyptian/10[*] Marquis 686; Sr9a/9[*] LMPG 685. |
| Sources / synonyms | CS[*] 4/Red Egyptian 2B 1308. |
| Varieties (alt.) | Red Egyptian Sr6 Sr8a 687; French Peace Sr7a Sr13 680; Excel Sr8a Sr17 752. |
| Marker associations | Xbarc101-2B/Xgwm12-2B **– |
| Synonym | SrKb1 468, Sr9 687 |
| i | Kenya 117A/10[*] Marquis 686; Sr9b /10[*] LMPG 685. |
| Sources / synonyms | CS[*] 7/Kenya Farmer 2B 939. |
| Varieties | Gamenya 844; Kenya stocks 669, 1557, 687, 673, 67, 689. |
| Varieties (alt.) | Egypt Na95 Sr7a Sr10 636; Festival Sr15 1553; Frontana Sr8a 689; Gamut Sr6 Sr11 1555; Glenlea Sr5 Sr6 heterogeneous 327; Kenora Sr15 1553; Magnif G Sr8a 689; No. 466 Sr6 Sr10 689; Pitic 62 Sr8a 33; Rio Negro Sr8a 689; Robin Sr11 879; Veadeira Sr10 687. See also 1553. |
| c | SR9B differs from SR9H and SR9G by different single amino acids 11747. |
| Note | Originally reserved for Sr36 , but later deleted .
Sr9d 678, 831. |
| Synonym | Sr1 676, 47, 677 |
| i | Hope/10[*] Marquis 677; H-44/10[*] Marquis 677; I Hope 2B-Ra 828; Sr9d/8[*] LMPG 685. |
| Varieties | Hopps Sr2 1040. |
| Varieties (alt.) | Lancer Sr2 Sr17 679; Scout Sr2 Sr17 679. |
| Type varieties | Arnautka 939; Mindum 939; Spelmar 939. |
| Note | Srv 1391, Srd1v 642, SrKn 11590. TRITD2Bv1G223210 . |
| Varieties | Line Td31-5R PI700734 {11514, 11590}; SST 16 1324; SST 33 785; SST 66 785; SST 3R 1324; Vernstein 845. |
| Varieties (alt.) | Combination III Sr36 841; Sunstar Sr8a Sr12 939. |
| Type varieties | ST464-A2 10473; Svevo 11590; Vernal emmer 1391; CI 7778 845; Sr9e occurs in many tetraploid wheats {1378, 939}. |
| tv2 | Arrivato Sr8b Sr13 10607; Kronos Sr13 11590; ST464 Sr13 10473. |
| Marker associations | Xgwm191-2B **– |
| Varieties | Chinese Spring 826; Not present in the near-isogenic I Sr9a -Ra 826. Deleted 11747. The Sr9f homolog protein in CS is non-functional indicating that the gene named Sr9f in CS is not an Sr9 allele 11747. |
| Sources / synonyms | CS[*] 7/Marquis 2B Sr16 965; CS[*] 4/Thatcher 2B Sr16 965. |
| Varieties (alt.) | Celebration Sr12 Sr16 965; Eagle Sr26 842; Hochzucht Sr5 Sr12 965; Lee Sr11 Sr16 965. |
| Type varieties | Acme 965; Iumillo 965; Kubanka 965. See also 504. |
| c | SR9G differs from SR9H by a single amino acid 11747. |
| Synonym | SrWeb 10858, SrWLR 11485. |
| Chromosome | 2BL |
| Varieties | Matlabas {10058, 11486}; RL6203 11010. |
| Varieties (alt.) | Gabo 56 CI 14035 Sr11 11010; Gabo CI 12795 Sr11 11010; Timstein CI 12347 Sr11 11010; Webster RL6201 Sr30 10858. |
| Marker associations | Xgwm47-2B **– |
SR10
| Note | 2B 686, 939. |
| i | Egypt Na95/4[*] Marquis 468. |
| Varieties | Federation 939; Geneva 1412; Hazen 49; Kenya stocks 669, 687, 673, 670. |
| Varieties (alt.) | Egypt Na95 Sr7a Sr9b 687; No. 466 Sr6 Sr9b 689; Red Bobs Sr7b 308. |
SR11
| Synonym | Sr11 687, Sr12 687 |
| Chromosome | 6BL |
| Chromosome | 6B |
| i | I Sr11 -Ra 828; Lee/10[*] Marquis 686. |
| Sources / synonyms | CS[*] 7/Kenya Farmer 6B 830; CS[*] 9/Timstein 6B 1308. |
| Varieties | Charter 844; Flevina 72; Gabo 687; Kenya stocks {1557, 673, 670, 844}; Sonora 64 33; Sylvia 71; Timstein {1308, 687}; Tobari 66 33; Yalta 844. |
| Varieties (alt.) | Charter Sr9h 11177; Eurga Sr6 1553; Gamut Sr6 Sr9b 1555; Lee Sr9g Sr16 687; N.P.790 Sr5 1555; Qing-Chung 5 Sr5 Sr6 564; Robin Sr9b 879; Prospect SrWld 197; Trident Sr38 11177; See also 1553. |
| Marker associations | KASP6BLIWB46893 – 0.3 cM – Sr11/KASP6BLIWB10724 – 0.3 cM – KASP6BLIWB72471 11177. |
A resistance gene allelic with
Sr11 was found in Chinese Spring
938, but the
P. graminis culture for its detection was lost.
SR12
| Note | Recessive. 3BS or centromeric region 11103, 682, 968, 1332. |
| Chromosome | 3BL |
| Sources / synonyms | CS[*] 7/Marquis Selection 3B Sr16 1332; CS[*] 5/Thatcher 3B Sr16 1332. |
| Varieties | Marquillo 682; Tincurrin 939; Windebri 939. |
| Varieties (alt.) | Condor Sr8a 11105; Celebration Sr9gSr16 939; Condor Thatcher Sr5Sr9gSr16 939; RL6058 (a Thatcher derivative) 11104; W3746 Sr7a 1371. |
Postulated for several durums
1378.
SR13
| itv | 8155-B2 11584; 8155-C2 11584; Rusty-SR464-C1 11584; ST464-C1 {10473, 11584}. |
| Type varieties | Alkabo 11584; Altar 84 11584; CItr 7771 11584; D101073 11584; Langdon {11217, 11584}; PI 352548 11584; ST464 Sr9e {10473, 11584}. |
| c | GenBank KY924305 (Resistance haplotype R3 {11217). |
| itv | CAT-A1 11584. |
| Type varieties | Camadi Abdu Tipo #103 11584. c : MW033594 (Resistance haplotype R4 11584. |
Alleles of many of the Sr13 genotypes listed under
SR14
| Chromosome | 1BL |
| i | Khapstein/10[*] Marquis 686. |
| Varieties | Line A 933. |
| Varieties (alt.) | Khapstein Sr7a Sr13 674. |
| tv2 | Khapli Sr13 674. |
SR15
| Chromosome | 7AL |
| Chromosome | 7A |
| Varieties | Present in stocks possessing Pm1 and Lr20 931, 1554; See Reaction to Blumeria graminis and Reaction to P. triticina . |
| Marker associations | Associated with clustered markers 323. |
SR16
SR17
| Note | Recessive. |
| Synonym | sr17 964 |
| Chromosome | 7B |
SR18
| Synonym | SrMn1 1263, Srmq1 99, SrPs1 1263, SrG2 844, Srrl1 1238 |
| Chromosome | 1D |
| i | I Hope 1D-Ra 828; Sr18/8[*] LMPG 685. |
| Sources / synonyms | CS[*] 6/Hope 1D 1308. |
| Varieties | Present in the majority of wheat stocks828. |
Stocks
not possessing
Sr18 : Brevit
54; Chinese Spring
828; Eureka
54; Federation
54; Gular
54; Kenya C6042
54; Koala
54; Little Club
828; Morocco
54; Norka
54; Prelude
828; Yalta
54.
SR19
| Synonym | Srmq2 99 |
| Chromosome | 2B |
| Chromosome | 2BS |
| Varieties | Mq-B 29. |
| Varieties (alt.) | Marquis Sr7b Sr18 Sr20 29. |
SR20
| Synonym | Srmq3 1238, Srrl3 1238 |
| Chromosome | 2B |
| Varieties | Mq-C 29; Rl-C 29. |
| Varieties (alt.) | Reliance Sr5 Sr16 Sr18 29; Marquis Sr7b Sr18 Sr19 29. |
SR21
| Chromosome | 2AL |
| i | Sr21/8[*] LMPG 685. |
| Varieties | CSSr21 {M10115}; Hexaploid derivatives of T. monococcum 939. |
| Type varieties | Tetraploid derivatives of T. monococcum 939. |
| dv | Einkorn CI2433 {1460, 11110}; Dv92 Sr35 10876; G2919 Sr35 10876; Various monococcum accessions. See also Sr45 which has similar specificity to Sr21 . |
| Marker associations | FD52726 **– |
SR22
| Note | Sr22 1460. |
| Chromosome | 7A |
| Chromosome | 7AL |
| Chromosome bin | 7AL-0.74-0.86; 7AL-13 0.83-0.89 10869. |
| i | Marquis[*] 4//Stewart[*] 3/ T. monococcum {649, 1460}; Sr22/9[*] LMPG 685; Others 1112. |
| Varieties | CS/3/Steinwedel[*] 2//Spelmar/ T. boeoticum 1460; Schomburgk 880; Steinwedel[*] 2//Spelmar/ T. boeoticum 1460; Others 1112; Recombinant line reported in {10772, 10773}. |
| Type varieties | Spelmar/ T. boeoticum 1460; Stewart[*] 6/ T. monococcum RL 5244 649. |
| dv | Various T. monococcum accessions {649, 1460}. |
| Marker associations | Hexaploid derivatives with Sr22a carried 'alien' segments of varying lengths; the shortest segment was distal to Xpsr129-7A 1112; See also158; Xcfa2123-7A – 6 cM – Sr22 **– |
| Note | SrTm5 11208. 7A[m] L 11208. |
| dv | T. monococcum ssp. monococcum PI 277131-2 Sr21 Sr22b Sr60 {11208, 11385}; PI 306540 Sr21 Sr22b Sr60 SrTm4 {11208, 11385}. |
| i | PI 306540 (2x)/Kronos (4x)//Clear White (6x)///*3 Fielder 11514; PI 700735 11514. |
| Marker associations | SrTm5/IWB25012/IWB44281/IWB405527/Sr22GMF/GMR – 0.8 cM – IWB6942 11208; pkw4995 (RefSeq v1.1 TraesCS7A02G499500 ) - 0.04 cM – SrTm5 – 0.04 cM- pkw4999 (RefSeq v1.1 TraesCS7A02G499900 ) 11514. |
| c | Sr22b has an insertion of a large (13.8-kb) retrotransposon in its second intron 11514.The predicted Sr22b NLR protein is 95.7 to 96.7% identical to proteins translated |
from six
Sr22a resistant haplotypes
11514. Allelism of
Sr22a and
Sr22b was based on more than 2,200 gametes
11514.
SR23
| Note | The following chromosome locations are consistant with the finding that the first location was based on Rescue monosomics. Rescue differs from CS by a 2B-4B reciprocal translocation 939. |
| Chromosome | 2BS |
| Chromosome | 4B |
| Varieties | Exchange 950; Warden 950; Sr23 is always associated with Lr16 950. |
| Varieties (alt.) | Etoile de Choisy Sr29 950. |
SR24
| Note | Derived from Thin. elongatum . 3DL = T |
| Chromosome | 3DS |
3DL-3Ae#1L {389, 956}.
SR25
| Note | Derived from Thin. elongatum . 7DL = T |
| Chromosome | 7DS |
7DL-7Ae#1L {388, 657, 291, 956}.
SR26
| Note | Derived from Thin. elongatum . 6AL 364 = T |
| Chromosome | 6AS |
SR27
| Note | Derived from S. cereale . 3A (T3A-3R) = T |
| Chromosome | 3AS |
SR28
| Chromosome | 2BL |
| i | Line AD 932. |
| Varieties | SD 1691, CI 12499 11148. |
| Varieties (alt.) | Kota Sr7b Sr18 932; SD4297 Sr8a 11419. |
| Marker associations | Xwmc332 – 1.4 cM – Sr28 – 6.0 cM – wPt-700711148; Sr28 – 1.6 cM – wPt-7004 11148; Sr28 – 0.6 cM – wPt-7004 11148. |
Although
11149 concluded that
Sr28 was present in VL404 and Janz it is more likely that the gene described is the linked gene
Sr9h .
The
Sr28 allele in SD4297 was originally reported as
Sr9h 11418.
SR29
| Synonym | SrEC 955 |
| Chromosome | 6DL |
| Chromosome | 6DS |
| i | Prelude/8[*] Marquis//Etoile de Choisy 313. |
| Varieties | Hana 71; Hela 76; Mara 68; Slavia 76; Vala 76. |
| Varieties (alt.) | Etoile de Choisy Sr23 955. |
SR30
| Synonym | SrW |
| Chromosome | 5DL |
| i | Sr30/7[*] LMPG - Lines 1, 2, and 3 685. |
| Varieties | Festiguay 688; Mediterranean W1728 1369; Webster 688. |
| Varieties (alt.) | HD2009 Sr2 10632; Klein Cometa Sr8b 1368; |
Relatively common in Australian and Mexican wheats. Various unnamed accessions
208,
1321.
SR31
| Note | Derived from S. cereale cv. Petkus. See also Reaction to P. striiformis, Yr9 : Reaction to P. triticina, Lr26
1B = T |
| Chromosome | 1BL |
1RS = T1BL.1R#1S
389 or 1R(1B).
SR32
| Note | Derived from Ae. speltoides . 2A 939, 1304 = T |
| Chromosome | 2AL |
SR33
| Synonym | SrSQ 650 |
| Chromosome | 1DS |
| Chromosome | 1DL |
| Varieties | RL 5405 = Tetra Canthatch/ Aegilops squarrosa RL 5288 650. |
| dv | Ae. tauschii PI 603225 11012; TOWWC0153 = TA2466 11685. |
| Marker associations | linked with Gli-D1 ; Xmwg60-1D **– |
SR34
| Note | Derived from Ae. comosa . 2A 967 = T2AS-2M# |
| Chromosome | 1L |
SR35
| Synonym | SrTm1 1522 |
| Chromosome | 3AL |
| Chromosome bin | 3AL8 0.85-1.00. |
| i | Marquis*5/G2919 10876. v,tv: Tetraploid and hexaploid derivatives of T. monococcum 957. |
| dv | DV92 Sr21 10876; G2919 Sr21 10876; T. monococcum C69. 69 Selection 957; G2919 957. |
| Marker associations | Sr35 was mapped to a 5.1 cM interval between XBF483299 and XCJ656351 in diploid wheat10712; Mapped in diploid wheat to a 2.2-3.1 cM region between Xbf483299 and XCJ656351 and corresponding to a 174 bp region in Brachypodium 10876. |
| c | Sr35 is a CC-NBS-LRR gene 10988. |
Sr35 was postulated in 21 accessions of
T. monococcum subsp.
monococcum 11288.
SR36
| Synonym | SrTt1 949 |
| Chromosome | 2BS |
| i | Sr36/8[*] LMPG 685. |
| Varieties | Arthur 939; Arthur 71 1324; Flemink 1324; GK Kincso 235; Gouritz 1324; Idaed 59; Maris Fundin 70; Mengavi 949; SST 101 1324; SST 107785; Timvera 949; T. timopheevii derivatives 949; Zaragoza785; Others {572, 10609}. |
| Varieties (alt.) | Bass Sr26 1450; Combination III Sr9e 939; Timson Sr5 Sr6 939. |
| Type varieties | T. Timopheevii 949. |
| Marker associations | Xgwm42 **– |
Sr37
| Synonym | SrTt2 949 |
| Chromosome | 4BL |
v,tv: T. timopheevii and derivatives
949,
484; Line W
949.
SR38
| Note | Derived from Ae. ventricosa . |
| Chromosome | 2AS |
6M[v ] = 2MS-6MS.6ML or 2MS-6ML.6MS
0009.
SR39
| Note | Derived from Ae. speltoides . = 2SL-2SS#2.2SL#2 11037. |
| Chromosome | 2B |
| Varieties | RL 5711 651, 646. |
| Type varieties | Amphiploid RL 5347 = Ae. speltoides / T. monococcum 651. |
| Marker associations | Sr39 is closely linked with Lr35 651; A SCAR marker was developed 9923. |
Lines with shortened alien segments are reported in
10741. Although
Sr39 produces similar responses to
Sr32 , also derived from
Ae. speltoides , recombination studies based on three crosses showed independent inheritance
646.
Sr39 segregated independently of
Lr13 651.
Sr39 may be present in DAS15 in combination with
Sr47 . A Ti2BL.2BS-2SS-2BS translocation
10872 separated from
Sr47 in DAS15 could contain
Sr39 - see
SrAEs7t .
Further lines with shortened segments are described in
11037 along with tightly linked co-dominant STS markers.
SR40
| Note | Derived from T. araraticum . 2BS 302 = T2BL/2G# |
| Chromosome | 2S |
| i | RL 6087 = RL 6071[*] 7/PGR 6126; RL 6088 = RL 6071[*] 7/PGR 6195 302. |
| Type varieties | T. araraticum PGR 6126 302; PGR 6195 302. |
| Marker associations | Xwmc661-2B **– |
SR41
| Chromosome | 4D |
| Varieties | WDR-B1 1214. |
| Varieties (alt.) | Waldron Sr5 (heterogeneous) Sr11 (heterogeneous) 1215. |
SR42
| Chromosome | 6DS |
| Varieties | PI595667 11087. |
| Varieties (alt.) | Norin 40 Sr54 938; PI410954 Sr24 11087. |
| Marker associations | Xcfd49-6D **– |
SR43
| Note | Derived from Th. elongatum . 7DS-7el |
| Chromosome | 2S |
SR44
| Note | Derived from Th. intermedium . T7DS-7J# |
| Chromosome | 1L |
SR45
| Synonym | SrD 934, SrX |
| Chromosome | 1D |
| Chromosome | 1DS |
| Varieties | 87M66-2-1 894; 87M66-5- 6 897; Thatcher + Lr21 , RL5406 894, 934; Various backcross derivatives developed at PBI Cobbitty1461. |
| dv | Ae. tauschii RL5289 {894, 934}. |
| su | CS1D5406 11134. |
| Marker associations | Xgwm1061D/BE44426 – 1.82 cM – Sr45 – 0.39 cM – csssu45/Af45 11134. |
| c | . Sr45 encodes a 1,230 aa CC-NBSLRR protein 11213. NCBI LN883757. |
Tests of natural and induced mutants of
P. graminis f. sp.
tritici indicated that
Sr45 had identical specificity to
Sr21 934. One race distinguishing
Sr45 and
Sr21 is reported in
11134. Cloning of both
SR45 and
SR21 showed that the genes were different.
SR46
| Chromosome | 2DS |
| Chromosome bin | 2DS5-0.47-1.00. |
| Varieties | L-18913 / Meering selections R9.3 10538; R11.4 10538; R14.2 10538. |
| Varieties (alt.) | L-18913 = Synthetic Langdon / Ae. tauschii var. meyeri AUS 18913 Sr9e 10538. |
| dv | Ae. tauschii var. meyeri AUS18913 10538 = CIae 25 11268; Ae. tauschii TA1703 11268. |
| Marker associations | Co-segregation with RFLP Xpsr649-2DS at both the diploid and hexaploid levels 10538; A PCR-based marker, csSC46 was developed from a BAC clone containing Xpsr649 10538. Xgwm210-2D – 3.9 cM – Sr46 – 5.6 cM – Xcfd36-2D – 0.3 cM – Xwmc111-2D 11268. |
| madv | Flanked by Xgwm1099-2D and Xbarc297-2D 11405. |
| c | Cloned by AgRenSeq and map-based methods Sr46 has a CC-NBS-LRR structure 11405. GenBank MG851023. Sr46 was more effective at higher temperatures in laboratory tests 11268. |
| Note | Derived from Ae. speltoides. |
| Chromosome | 2BS |
2B = 2BL-2SL-2BL.2BS
10549.
SR48
| Synonym | SrAn1 10565 |
| Chromosome | 2DS |
| Chromosome | 2AL |
| Chromosome bin | 2AL1-0.85-1.00 10564. |
| Varieties | Arina {10564, 10511, 10565}. |
| Varieties (alt.) | Arina Sr56 AUS 91457 10851. |
| Marker associations | Xgwm382-2AL **– |
SR49
| Chromosome | 5BL |
| Varieties | Mahmoudi AUS 28011 10704. |
| Marker associations | sun479 **– |
SR50
| Synonym | SrR 377 |
| Chromosome | 1DS |
| ad | CS + Imperial 1R 377. |
| Varieties | Line T6-1 AUS 91434 10745. T1DL.1RS-DR.A1 11316. |
| al | S. cereale cv. Imperial. |
| Marker associations | Line T6-1 retains the rye marker AW2-5 10745. |
| c | GenBank KT725812, 3,508 bp. Sr50 encodes a CC-NBS-LRR protein homologous to the barley Mla gene 11316. GenBank KT725812. In rye Sr50 may be allelic with Sr31 ; however in wheat they can be regarded as separate loci Sr50 is located in a small interstitial segment not detected by GISH. Line T6-1 lacks the Sec-1 allele from rye 10745. |
Sr51
| Note | Homoeologous group 3 10803; 3S[S] S 10803 3A ( |
| Chromosome | 3AL |
SR52
SR53
| Note | Derived from Ae. geniculata |
| Chromosome | 5D |
T5DS5DL-5M[g] L-5DL
10789.
SR54
| Chromosome | 2DL |
| Varieties (alt.) | Norin 40 Sr42 10816. |
| Marker associations | Xcfd-283-2D **– |
SR55
| Note | Adult plant resistance |
| Chromosome | 4DL |
| Chromosome bin | Distal to break point 0.56 FL10678. |
| i | RL6077=Thatcher*6/PI 250413 {10847, 10678}. |
| Varieties | Chapingo 48 11070. |
| Marker associations | Pleiotropic of closely linked with Lr67 and Yr46 and associated with Xgwm165-4D and Xgwm192-4DL 10847,10678. |
| c | This multiple disease resistance locus was identified as a hexose transporter most similar to the STP13 family and containing 12 predicted transmembrane helices 11070. |
Sr55 is pleiotropic or closely linked with Lr67 , Yr46 , Pm46 and Ltn3 .
SR56
| Note | Adult plant resistance |
| Synonym | QSr.sun-5BL 10565 |
| Chromosome | 5BL |
| Chromosome bin | 5BL1600.79-1.00. |
| Varieties | AF533 10851. |
| Varieties (alt.) | Arina Sr48 AUS 91457 138. |
| Marker associations | Xsun209 (SSR) – 2.6 cM – Sr56 – 1.2 cM – Xsun320 (STS from wPt-7665) 10851. |
In the earlier QTL analysis of an Arina/Forno population
QSr.sun-5BL accounted for 12% of the PVE
10565. In the present study of an Arina/Yitpi RIL population stem rust response segregated as a single gene. The response phenotype was 40-50 MS-S.
SR57
| Note | Adult plant resistance. |
| Chromosome | 7DS |
| Chromosome bin | 7DS4. |
| su | Lalbahadur(Perula7D) GID 5348503 and GID 5348496 {10648, 10861}. |
| Varieties | Chinese Spring 10861; Wheat accessions with Pm38/Lr34/Yr18 , see Reaction to Blumeria graminis , Reaction to Puccinia striiformis , Reaction to Puccinia triticina , Leaf tip necrosis. |
| Marker associations | See Reaction to Puccinia triticina . |
| c | Putative ABC transporter10648. |
SR58
| Chromosome | 1BL |
| Varieties | Lr46 Deletion Mutant 109 (GID 5349718) 10965; Lr46 Deletion Mutant 111 (GID 5349716) 10965. |
| su | Lalbahadur(Pavon 1B) (GID 519245) 10965. |
SR59
| Note | Derived from Scale cereale 2D (T |
| Chromosome | 2DS |
SR60
| Note | 5A[m] S 11208. |
| dv | PI 277130 11385; PI 277131-2 11385; PI 277135 11385; PI 306540 11385; PI 306545 11385; PI 306547 11385; PI 428158 11385; PI 435001 11385. |
| dv2 | PI 306540 Sr21 SrTm4 SrTm5 11208. |
| Varieties | PI 689563, PI 306540/Kronos/2/UC1361/4UC1201436 11385. |
| Marker associations | Pinb-5A[m] S …… GH724575/DK22976/CA5012332 – 0.25 cM – Sr60/LRRK123.1 – 0.19 cM – CJ942731/CJ884584 11208; GH724575 – 1.56 cM – Sr60/ LRRK123.1 – 0.52 cM – FD475316 11208. Sr60F2R2 11385. |
| c | Sr60 from T. monococcum PI 306540 encodes a 724 amino acid protein with two putative kinase domains designated Wheat Tandem Kinase 2 ( WTK2 ) 11208,11385. GenBank MK629715 11385. The gene is orthologous to T. aestivum gene TraesCS5A02G005400 11385. Sr60 in UC12014-36+Sr60 (PI 689563) is linked with puroindoline genes for grain softness that were also introgressed from the diploid parent 11385. |
SR61
| Note | SrB 11337. Derived from Th. ponticum 11397}. 6A = T |
| Chromosome | 6AS |
SR62
| Note | Sr1644-1Sh 11519. 1BS = T1S[Sh] S.1S[Sh] L- |
| Chromosome | 1BL |
| Varieties | Zahir*4 / Ae. sharonensis AS_1644, JIC DPRM0081 11524. |
| Marker associations | Mapped in Ae sharonensis to a 480 kb interval on chr arm 1[Sh] S 11519. |
| c | Cloned from Ae. sharonensis and validated in transformed wheat. Sr62 is tandom kinase with both domains required for function 11524. Sr62 has a kinase-pseudokinse (tandom kinase) structure with both components required for resistance function, 740 amino acids 11524. GenBank MZ826707. |
1DS (T1S[Sh] S.1S[Sh] L-1DL).
SR63
| Note | Adult plant resistance. QSrGH.cs-2AL 11554. |
| Chromosome | 2AL |
| Type varieties | GH/M14 RIL49 XXXXX 11554; GH/M14 RIL188 AUSXXXX 11554. |
| tv2 | Glossy Huguenot Sr58 (syn QSrGH.cs1BL ) AUS2499 11554. |
| Marker associations | IWA200-KASP32429 – 2.7 cM – Sr63 – 3.0 cM – IWB4881-_ 2AL 11554. |
SR64
| Note | Derived from Thinopyrum . 4D = T4DL·4J[S] S 10788. |
| Varieties | KS93WGRC27 404; Mace (PI 651043) 11681. 4D = T4DL·4DS-4J[S] S 11644. |
| i | Line E*6/rec213 ( Sr64, Wsm1 ) = GSTR 527 {11644, https://npgsweb.ars-grin.gov/gringlobal/accessiondetail?id=2158211}. |
| Varieties | KS08WGGRC50 {11644, 10788}. |
| Marker associations | KASP markers developed in 11643. |
SR65
| Note | SrH2 11682. |
| Chromosome | 1AS |
| Varieties | Hango-2 FLW6-Selection AGG95499WHEA 11682. |
| Marker associations | KASP7944/ KASP11804 (2,3 Mb, CS REfSeq 2,1) – 2.6 cM – SR65 – 2.0 cM – KASP12147 / KASP21832 / sunCS265 11682. CHS21_002378110 bp, respectively. |
Temporay designations
| Varieties | SW55-1 323; SW56-1 323. |
| Varieties (alt.) | SW33-5 Sr9a Sr13 323; SW54-3 Sr9d Sr13 323. |
| Chromosome | 4AL |
| Chromosome bin | 4AL4-0.8-1.00. |
| Varieties | Kenya Sunbird 11092; Kenya Tai 11092; ND643/2*Weebill1 GID6302736 11092. |
| Type varieties | ND643 11092. |
| Marker associations | Xwmc776-4A **– |
| Chromosome | 4DS |
| Varieties | Tugela 11722. |
| Varieties (alt.) | PAN 3161 Sr57/Lr34 11722. |
| Marker associations | RHT-D1 – 12.8 cM – Xwmc-720-4D 1.8 cM – SRPan3161 – 1.8 cM – Xgpc8038Xwmc52/Xgpc7414/Xcfd23/Xpsp3103-4D 11722. |
| Chromosome | 5BL |
| Type varieties | PI 94701 11780. |
| Marker associations | Mapped to a 0.17 cM region flanked by pku69124 and pku69228 and corresponding to 1.04 and 2.15 Mb in the Svevo REfSeq 1.0 and CSRefSeq 2 genomes 11780. |
| Varieties | PI 410966 11180. |
The marker profile for this gene was very similar to that of a line with Sr36 {11180, 10825}. Specificity tests were not reported.
| Chromosome | 2V |
| ad | TA7753 11395. |
| al | D. villosum TA10276 11395. |
| Note | Reccessive. 2A[m] L 11111. |
| dv | Monogenic line TmS4-260 11673. |
| dv2 | T. monococcum PI306540 Sr21 Sr22b Sr60 {11111, 11673}. bin/contig: IWGS2ALcontig6401556. |
| Marker associations | BQ461276 **– |
| Note | SrSha7 11057; SrA2K 11691; QSr.nc. |
| Chromosome | 6D |
| Chromosome | 6DS |
| Varieties | AGS2000 11691; Bai-Yu-Bao 564; Beijing 9 564; Beijing 11 564; Digalu {11132, 11057}; Ember 11152; Fertodi 293 977; Guard-1 11152; Kenya Robin {11152, 11057}; KS91WGRC11 {M22059}. Martonvasari 5 977; Mironovska = Mironovskaya 808 {68, 977}; Morvarid 11132; Nung-Ta 139 564; Overland 11152; Parker 977; Ripper 11132; Shield 11152; Trison 1230; Triumph 64 {1230, 841, 977}; Xuzhou 14 564; Yen-An 15 564. |
| Varieties (alt.) | Beijing 10 Sr5 564; PI 177906 Sr7b Sr28 11419; MD01W28-08-11 Sr31 11691. |
| Marker associations | SrTmp – 3.1 cM – IWB49086 11419. The possibility of this gene being present in a number of South African cultivars, including Betta = Klein Impacto, is discussed in 10941. |
| Varieties (alt.) | Prospect Sr11 197. |
| Chromosome | 1B |
| Varieties | Zdar 67. |
| Note | Recessive. |
| Chromosome | 6AS |
| Varieties | Choteau / Mountrail Der. SXD 43 PI 681713 11580; Marruecos*2/CItr 8155 11580. |
| Type varieties | Alkabo 11580}; Renville 11580. |
| tv2 | Grenora Sr13 11580; Munich Sr13 11580. |
| Marker associations | Co-segregation with KASP6ASIWB10558 11580. Also predicted in durum accessions Belzer, Dilse, Lloyd, Divide and Montrail 11580. |
| Chromosome | 7DS |
| Varieties | Genetic stock to be designated 10936. |
| dv | Ae. tauschii TA10171 10936. |
| Marker associations | Sr10171 **– |
| Synonym | SrTA10187 11181 |
| Chromosome | 6DS |
| Varieties | Genetic stock to be designated 10936. |
| dv | Ae. tauschii TA10187 10936. |
| Marker associations | Xcfd49-6D **– |
| Chromosome | 6DS |
| Varieties | CItr 105026 11249. |
| Marker associations | IWB36391/IWB34477 – 2.9 cM – Sr15026 – 3.0 cM – IWA4000 11249; IWB36391 – 0.4 cM – IWB262 – 2.6 cM – Sr15026 – 1.3 cM – IWB49086 11249. |
Sr10526 was detected with races QFCSC and TTTTF. When the same DH and RIL populations were tested with race TRTTF there was evidence for complementary resistance genes on chromosomes 6DS and 6AS, one of which was
Sr10526 . When the populations were tested in the field in Kenya with Ug99 races
QSr.abr-6AS.1 (R[2] = 0.1 – 0.3) was detected
11249.
Th. ponticum -derived, stem rust resistant line WTT34 with a T5DS.5DL-Th chromosome pair is reported in
11783.
Additional temporary designations are listed in
1230. Genotype lists:
323,
970,
10270,
10511,
10697. Complex genotypes: AC Taber:
Sr2, Sr9b, Sr11, Sr12 9905. Centurk:
Sr5 979,
Sr6 979,
Sr8a, Sr9a 979,
Sr17 979. Chris:
Sr5 679,
1371,
Sr7a 1371,
Sr9g 1371,
Sr12 1371. Egret:
Sr5 939,
Sr8a 939,
Sr9b 939,
Sr12 939. FKN:
Sr2, Sr6, Sr7a, Sr8a 791,
Sr9b 791. H-44:
Sr2, Sr7b 677,
Sr9d 677,
Sr17 . Hartog:
Sr2 127,
Sr8a, Sr9g, Sr12 939. Hope:
Sr2 677,
Sr7b 677,
Sr9d 677,
Sr17 . Kenya Plume:
Sr2 1370,
Sr5 1370,
Sr6 1370,
Sr7a 1370,
Sr9b 1370,
Sr12 1370 Sr17 1370. Khapstein:
Sr2, Sr7a, Sr13 674,
Sr14 674. Lawrence:
Sr2, Sr7b 939,
Sr9d, Sr17 . Lerma Rojo 64:
Sr2, Sr6, Sr7b 979,
Sr9a 979. Madden:
Sr2, Sr9b, Sr11, Sr13 842. Manitou:
Sr5 679,
Sr6 679,
Sr7a, Sr9g 965,
Sr12 939. Mendos:
Sr7a 939,
Sr11 879,
Sr17, Sr36 . Pasqua:
Sr5, Sr6, Sr7a, Sr9b, Sr12 . Gene
Lr34 acted as an enhancer of APR
9905. PI 362698:
Sr5, Sr8a, Sr12, Sr15?, Sr16 11347. PI 362698:
Sr5, Sr8a, Sr12, Sr15?, Sr16 11347. PI 60599:
Sr7a 689,
Sr8a, Sr9b, Sr10 . Redman:
Sr2, Sr7b 939,
Sr9d 939,
Sr17 . Reliance:
Sr5 1308,
Sr16 1238,
Sr18 ,
Sr20 . Renown:
Sr2, Sr7b 939,
Sr9d 939,
Sr17 . Roblin:
Sr5, Sr7a? Sr11, Sr12. Selkirk:
Sr2 499,
Sr6 468,
Sr7b 499,
Sr17, Sr23 950. Thatcher:
Sr5 1308,
Sr9g 965,
Sr12 939,
Sr16 1308. Timgalen:
Sr5 (heterogeneous)
1555,
Sr6 1555,
Sr8a, Sr36 . WW15 = Anza = Karamu = T4:
Sr5 939,
Sr8a 939,
Sr9b 939,
Sr12 939.
QTL
Arina / Forno: Qsr.sun-5BL 10565; resistance contributed by Arina, associated with
Xglk356-5B , R[2] = 11-12%
10565.
Qsr.sun-7DS 10565; resistance contributed by Forno, associated with markers
XcsLV34 and
Xswm10 diagnostic for
Lr34/Yr18 10565.
Avocet S / Pavon 76: RIL population of lines lacking
Sr26 :Five QTLs,
QSr.cim-3B(Sr2), QSr.cim1B(Lr46/Yr29/Pm39 region) and
QSr.cim-3D (R[2] =0.2) from Pavon 76;
QSr.cim-4B and
QSr.cim-5A from Avocet S
10975.
Carberry (Resistant in Canada) / AC Cadillac (Resistant in Canada and Kenya): DH population: QTLs effective in Kenya were located in chromosomes 2B, 5B, 7B and 7D, those effective in Canada were on 3B (
Sr2 ), 5A and 5B; those effective in Kenya and Canada were on 4B and 6D (
Sr2 ); both parents had
Lr34/Sr51 11040
HD2009 / WL711: RILs: Three of several QTLs gave consistent effects across environments, viz.
QSr.sun-3BS , R[2] = 0.09-0.15, probably
Sr2, QSr.sun-5DL , R[2] = 0.2-0.44, probably
Sr30 , and
QSr.sun-7A , R[2] = 0.07-0.13, nearest marker
wPT-4515 10632.
PBW343 (S) / Muu (I): RIL population:4 consistent QTLs were identified,
QSr.cim-2BS, QSr.cim3BS(Sr2) and
Sr.cim-7AS from Muu, and
QSr.cim-5BL from PBW343
11019.
RL6071 / RL6058(R): RIL population: RL6058, a Tc backcross line with
Lr34/Sr57 is more resistant than Tc. Enhancement of resistance in both Kenya and North America was attributed to a QTL in the region
wPt5044 – Xgwm-2B in chromosome 2BL
10902.
Spark / Rialto: DH population: Sr5 and
Sr31 were derived from Rialto and
QDr.sun-3BS (
Xgwm10343B –
BS00010945 region and
QSR.sun-5A (
Xgwm445-5A – Xgwm205-5A region) were derived from Spark
11231.
Suppressor of Stem Rust Resistance 1
| Chromosome | 7DL |
| Varieties | Canthatch CTH-K RL5451 11411; Columbus 11417; Katepwa 11417. Other Canadian Thatcher derivatives 11417. |
| Marker associations | Localised to a 1.3 cM genetic interval flanked by Xkwh239 and Xkwh281 11412. |
| c | TraesCS7D01G526100 . Encodes a mutant form of TaMed15b.D , a subunit of the Medicator complex 11412. |
Disease: Stripe rust, yellow rust.
YR1
| Synonym | L 1622 |
| Chromosome | 2AL |
YR2
YR3
| Note | 1B 184, 185. |
| Chromosome | 2B |
| Chromosome | 5BL |
| i | Taichung 29*6/Vilmorin 23 10370. |
| Varieties | Bon Fermier 1431; Nudif TP1 1431; Stephens 184,182; Vilmorin 23 10370. |
| Varieties (alt.) | Argent Yr1 Yr4a Yr6 1067; Cappelle-Desprez Yr4a 851; Druchamp Yr4a ; Hobbit Yr4a Yr14 604; Kinsman Yr4a Yr6 604; Mardler Yr1 Yr2 Yr4a Yr13 1459; Maris Huntsman Yr2 Yr4a Yr13 604; Maris Freeman Yr4a Yr6 604; Maris Ranger Yr4a Yr6 604; Nord Desprez Yr4a 184, 182; Top Yr4a 230; Viginta Yr2 Yr4a ; Yamhill Yr2 Yr4a 182; Zdar Yr4a {71, 73}. |
| Marker associations | Yr3 (YrV23) – Xwmc3562B , 9.4 cM 10370. |
| Note | Chen and Line 182 found that a second gene in Hybrid 46 - presumably this gene was not located at the Yr3 locus. |
| Varieties (alt.) | Hybrid 46 Yr4b 851. |
| Chromosome | 1B |
| Varieties | Minister 184, 182, 851. |
| Varieties (alt.) | Cleo Yr2 1430; Maris Beacon Yr2 Yr4b 1459. |
Undesignated allele. v: Enkoy
50; Vilmorin 23; Staring
1430.
YR4
| Note | 6B 184, 185. |
| Varieties | Vilmorin 23 184. |
| Varieties (alt.) | Argent Yr1 Yr3a Yr6 1067; CappelleDesprez Yr3a 851; Druchamp Yr3a 182; Hobbit Yr3a Yr14 604; Huntsman Yr2 Yr3a Yr13 604; Kinsman Yr3a Yr6 604; Maris Ranger Yr3a Yr6 604; Maris Freeman Yr3a Yr6 604; Mardler Yr1 Yr2 Yr3a Yr13 1459; Nord Desprez Yr3a 182; Top Yr3a 230; Viginta Yr2 Yr3a 71,73; Yamhill Yr2 Yr3a ; Zdar Yr3a 71, 73. |
| Chromosome | 6B |
| Varieties | Avalon 1160; Opal 1431; Staring 1430. |
| Varieties (alt.) | Hybrid 46 Yr3b ; Maris Beacon Yr2 Yr3b {1459, 1160}; Nudif TP12 Yr3c 1431; Stella Yr2 1430. Undesignated allele. [ YrRub 10720]. 3BS 10720. |
YR6
| Synonym | B 1622 |
| Chromosome | 7B |
| Chromosome | 7BS |
| i | AVS+Yr6 970. |
| Varieties | Austerlitz 230; Fielder 181; Heines Kolben 1622; Koga II 746; Maris Dove 604; Recital 230; Takari 368. |
| Varieties (alt.) | Argent Yr1 Yr3a Yr4a 1067; Avocet (UK) Yr1 Yr2 1459; Cadenza Yr7 11187; Flamingo Yr2 1430; Heines Peko Yr2 {746, 877}; Kinsman Yr3a Yr4a 604; Kolben Yr2 611; Longbow Yr1 Yr2 {1459, 83}; Maris Freeman Yr3a Yr4a 604; Maris Ranger Yr3a Yr4a 604; Mithras Yr1 Yr2 1459; Norman Yr2 {1459, 83}; Nudif TP241 Yr7 1431; Nudif TP250 Yr1 1431; Orca Yr3c 1431; Pavon 76 Yr7 284; Penjamo 62 (heterogeneous) Yr18 1562. |
| Type varieties | Duilio 192; Latino 192; Norba 192; Quadruro 192; Rodeo (heterogeneous) 192. |
| Marker associations | Xgwm577-7B – Yr6 , <0.4 cM 11187; Narrowed to an ~60 kb region including Xgwm577 11188; Given the location of Xgwm577 the gene location should be 7BL. |
TraesCS2B01G488000
Allelism with
YR5a and
YRSP is reported in
10759 but cloning indicated that
YR7 is not allelic with
YR5a and
YrSP (
Sr5b )
11351.
| Note | Allelic with Yr5a and YrSp 10759 2B 1429, 612. |
| Chromosome | 2BL |
| i | AVS+Yr7 970; Taichung 29*6/Lee 10371. |
| Varieties | Present in many hexaploid wheats with Sr9g – see 965; Brock 83; Lee 877; Nudif TP257 1431; PBW12 1352; Paragon 11351. Prinqual 230; Renard 83; Talent 230; Tango 230; Tommy 83; WL2265 1352. |
| Varieties (alt.) | Cadenza Yr6 11187; Donata Yr9 1430; Flevina Yr2 1431; Garant Yr2 230; Hardi Yr2 230; Lely Yr2 1430; Nudif TP241 Yr6 1431; Pakistan 81 = Veery#5 Yr9 284; Pavon 76 Yr6 284; Reichersberg 42 Yr25 10; Thatcher 965. |
| Type varieties | Iumillo 965; but not present Acme and Kubanka which also carry Sr9g 965. |
| Marker associations | Yr7 – Xgwm526-2B , 5.3 cM 10371; Xwmc175A-2B – Yr7 , <0.4 cM 11187. |
| c | Yr7 (Genbank MN273771) along with Yr5a and YrSP has a BED-LRR structure lacking a CC-domain 11351. |
YR8
| Note | Derived from Ae. comosa . 2D = T2D-2M 1218 = T2DS-2M# |
| Chromosome | 1L |
YR9
| Note | Derived from S. cereale . See also Reaction to P. graminis, Sr31 : Reaction to P. triticina Lr26 1B= |
| Chromosome | 1BL |
| Chromosome | 1RS |
| i | AVS+Yr9 970. |
| Varieties | Almus 998; Aurora 1623. |
Chromosome status not specified Baron
83; Benno
998; Bezostaya II
998; Branka
71; Clement {1532, 1430}; Cougar
0267; Danubia
68; GR876
753; Hammer
83; Iris
68; Kavkaz
1623; Kromerzhizhskaya
1149; Lyutestsens 15
1149; Lovrin 10
998; Lovrin 13
998; Mildress
1027; Perseus
998; Predgornaya
998; Rawhide (heterogeneous)
0267; Riebesel 47/51{878, 1623}; Roxana
68; Sabina
68; Salmon
998; Sarhad 82
284; Selekta
68; Shtorm
1149; Skorospelka 35
998; Sleipner
10038; Solaris
68; St 2153/63
997; Stuart
83; Veery
986; Weique
1627; Winnetou
998; Weihenstephan 1007/53
1623.
TraesCS1B03G0003500 , TraesCS1B03G0003600 (CS RefSeq 2.1)
| Synonym | YrVav 0262 |
| Chromosome | 1BS |
| Chromosome | 1B |
| i | AVS+Yr10 970. |
| Varieties | AC Radiant 11167; Crest 11304; Jacmar 11145; Moro 878; PI 178383 878; QLD709 = Janz[*] 2/ T. vavilovii 0262; T. spelta 415 641; T. vavilovii AUS 22498 0262; 10 Chinese cultivars 11304. |
| Marker associations | A SCAR marker was described in 0261; QLD709 and T. spelta 415, both with white glumes, failed to amplify the SCAR sequence, but both carried unique alleles at the Gli-B1 and Xpsp3000-1B loci 0262. These differed from the Moro source of Yr10 . Yr10 – 1.5 cM – Gli-B1 – 1.1 cM – Xpsp3000-1B 0261; Yr10 – 1.2 cM – Xpsp3000 – 4.0 cM – Gli-B1 321; Cosegregation between a RGA marker RgaYr10a and Yr10 was reported in 0376. Yr10/Xsdauw79 – 0.2 cM – Xsdauw78 – 1.0 cM – Yr10CG – 2.1 cM – Xsdauw75 – 0.5 cM – Xpsp3000-1B 11304. |
| c | Yr10 has a CC-NBS-LRR structure. GenBank AF149112 11145. AF149112 ( Yr10CG ), TraesCS1B03G0000200, shown not to be the candidate gene 11304. |
| c | A gene named YrNAM located 1.2 cM from ‘ YrCG ’, the original allegedly claimed Yr10 , but with common specificity, encoded an NLR with 5’ NAM and 3’ ZNF0BED domains 11692. YrCG was confirmed as Yr10 {11763). GenBank OP490604. |
YR11
| Note | Adult plant resistance. |
| Synonym | R11 1157 |
| Varieties | Joss Cambier 606. |
| Varieties (alt.) | Heines VII Yr2 Yr25 see 970. |
| Note | Adult plant resistance. |
| Synonym | R12 1157 |
| Varieties | Fleurus 1158; Frontier 1159; Pride 1157. |
| Varieties (alt.) | Armada Yr3a Yr4a {81, 1160}; Mega Yr3a Yr4a {1160, 1157}. |
| Varieties | Waggoner Yr3a Yr4a Yr6 1158. |
YR13
| Note | Adult plant resistance. |
| Synonym | R13 1157 |
| Varieties (alt.) | Bounty Yr1 Yr3a Yr4a 1459; Brigand Yr2 Yr3a Yr4a Yr14 609; Copain Yr3a Yr4a 1158; Gawain Yr2 Yr3a Yr4a Yr14 81; Guardian Yr2 82; Hustler Yr1 Yr2 Yr3a Yr4a {1459, 83}; Kinsman Yr3a Yr4a Yr6 1459; Mardler Yr1 Yr2 Yr3a Yr4a 1459; Maris Huntsman Yr2 Yr3a Yr4a {1459, 83, 604}; Maris Nimrod Yr2 Yr3a Yr4a {1459, 607, 1157}; Marksman Yr1 {heterogeneous} Yr2 Yr3a Yr4a 1459; Pageant Yr2 Yr3a Yr4a 82; Professor Marchal Yr2 Yr3a Yr4a 607; Sportsman Yr1 Yr3a Yr4a 1459; Virtue Yr1 Yr3a Yr4a {1158, 1459, 83}. |
YR14
| Note | Adult plant resistance. |
| Synonym | R14 1157 |
| Varieties | Kador 1158; Score 1157; Wembley 610. |
| Varieties (alt.) | Avalon Yr3b Yr4b {1459, 83}; Brigand Yr2 Yr3a Yr4a Yr13 {1459, 83, 609}; Galahad Yr1 Yr2 (heterogeneous) Yr3a Yr4a {1459, 83}; Gawain Yr2 Yr3a Yr4a Yr13 81; Hobbit Yr3a Yr4a {1459, 1157}; Maris Bilbo Yr3a Yr4a 1459, 1157}; Moulin Yr6 83; Rapier Yr2 Yr3b Yr4b 83; Wizard Yr2 (heterogeneous) Yr3b Yr4b {1459, 83}. |
YR15
| Note | Adult plant resistance. |
| Chromosome | 2D |
| Varieties | Bersee 1604; Cappelle-Desprez 1598. |
YR17
| Note | 2AS-6M[v] . |
| Chromosome | 2AS |
| Note | TraesCS7D03G0183600
Yr18 1362}. |
| Chromosome | 7DS |
| Chromosome | 7D |
| i | AVS+Yr18 970; Thatcher ( Yr7 ) near-isogenic lines with Lr34 including the 13 2-gene combinations reported in {434, 937}. |
| Varieties | Jupateco 73R; Lerma Rojo 64 1375; Libellula 11139; Nacazari 76 1375; Strampelli 11139; Tesia F 79 1375; Tonichi S 81 1375; Wheaton 1375}. |
| Varieties (alt.) | Parula Yr29 10281; Penjamo 62 Yr6 (heterogeneous) 1375; Saar Yr29 10481; Wheats with Lr34 (See Lr34 ); Others 1376; Kauz and derivatives, Bakhtawar 94, WH542, Memof, Bascribey 95, Seyhan 95 Yr9 Yr27 10160. |
| Marker associations | Complete linkage with Lr34 937,1362; Ltn 1361; and Bdv1 1363; Xgwm120-7D – 0.9 cM – Yr18 – 0.7 cM – Xgwm295-7D 10259. |
| c | See Lr34 ; Putative ABC transporter 10648. This gene is identical to Lr34, Pm38 and Ltn and confers stem rust resistance in some genetic backgrounds. Some AVS NILs also have Yr18 . Forty-three Chinese land varieties predicted to have Yr18 based on markers had high rust severities. Genetic analyses of four of these landrace (Sichuanyonggang 2, Baikemai, Youmai and Zhangsihuang) indicated the presence of an |
independent suppressor
11101. Libellula had an additional 4 QTL and Strampelli had an additional 3 QTL
11139.
Yr18 conferred seedling resistance to leaf rust when transformed into durum wheat {M10114}.
YR19
| Synonym | YrCom 183 |
| Chromosome | 5B |
| Varieties (alt.) | Compair Yr8 183. |
YR20
| Synonym | YrFie 181 |
| Chromosome | 6D |
| Varieties (alt.) | Fielder Yr6 183. |
YR21
| Synonym | YrLem 181 |
| Chromosome | 1B |
| Varieties | Lemhi 183. A closely linked gene, also in Lemhi, conferred resistance to P. s. hordei 10450. Both genes were mapped relative to RGAP markers. Yr21 – YrRpsLem , 0.3 cM 10450. |
YR22
| Synonym | YrLe1 183 |
| Chromosome | 4D |
| Varieties (alt.) | Lee Yr7 Yr23 183. |
YR23
| Synonym | YrLe2 183 |
| Chromosome | 6D |
| Varieties (alt.) | Lee Yr7 Yr22 183. |
YR24
| Synonym | YrCH42 |
| Chromosome | 1BS |
| i | AVS+Yr24 970. |
| Varieties | Chuanmai 42 10339; Meering[*] 3/K733/ Ae. tauschii AUS18911 952; Neimai 836 11259. Synthetic 769 10339. |
| Type varieties | Decoy 1 10339; K733 952. |
| Marker associations | Gene order Yr15 – Yr24 – Xgwm11-1B 10112; Xbarc187-1B – 2.3 cM – Yr24 – 1.6 cM – Xgwm498-1B 10339. Yr24 is identical to Yr26 {10339, 11391}. |
YR25
| Chromosome | 1D |
| Varieties | Carina 0010; Hugenout 0010; Strubes Dickkopf; TP1295 158; TP981 158; Tugela 314; Tugela-DN {0010, 314}. |
| Varieties (alt.) | Carstens V Yr32 10016; Heines Peko Yr2 Yr6 0010; Reichersberg 42 Yr7 0010; Spaldings Prolific YrSP 10016. Yr25 was predicted to be present in Strubes Dickkopf, Heines VII Yr2 , Heines Peko Yr2 Yr6 , Reichersberg 42 Yr7 and Clement Yr9 158. This prediction was confirmed for Heines VII, Heines Peko and Reichersberg 42 but the pathogen culture used in 0010 was not virulent on Clement ( Yr9 ) or on Strubes Dickkopf where another, or a different gene, must be present. |
Identical to YR24 {10339, 11391}.
| Note | The earlier location of 6AS ( |
| Chromosome | 6AL |
TraesKAR2B01G0121530LC . TraesCSB02G182800 .
| Synonym | YrSk 928; QYr.sgi-2B.1 {10184, 11232}. |
| Chromosome | 2BS |
| i | AVS+Yr27 970. |
| Varieties | Avocet 2B (= AvocetS + QYr.sgi-2B.1 ) 11593. Ciano 79 928; Inquilab 91 928; Kauz 928; McMurachy 928; Opata 85 928; PWB343 928; Selkirk 928; Webster 928. |
| Varieties (alt.) | Attila Yr27 928; Kariega Yr18 11593; Kauz and derivatives, Bakhtawar 94, WH542, Memof, Basribey 95, Seyhan 95 Yr9 Yr18 10160. |
| Marker associations | When analysed as a QTL, variation associated with the Yr27 locus was associated with RFLP markers Xcdo152-2B and Xcdo405-2B 928. A Yr27 -specific molecular marker was based on Asn 895 found only in Yr27 11593. |
Many CIMMYT wheat lines
953. Recombination
Yr31 – Yr27 , 0.148,
Yr31 – Lr23 , 0.295
0325.
YR28
| Note | [ YrAS2388 {10822, 11438}]; YrAet672 11664. |
| Chromosome | 4DS |
| Varieties | Synthetic = Altar 84/ Ae. tauschii W-219. Synthetic/Opata 85 SSD population. Genotype lists: 970, 1325. |
| dv | Ae. tauschii W-219 1377; CPI 110672 11664. |
| Marker associations | Close association with Xmwg634-4DS 1377. |
| c | Yr28 has a CC-NBS-LRR structure, alternative splicing in the NBS region and duplicated 3’ UTR 11438. GenBank MK73661 – MK73666 11438. |
Yr28 was present in all tested accessions of
Ae. tauschii ssp.
strangulata and some accessions of ssp.
tauschii 11438. Often suppressed in synthetic and derived wheat backgrounds.
Yr22 was also reported for chromosome 4D, but in the absence of an appropriate single gene stock and the unavailability of avirulent cultures in most laboratories, tests of linkage with
Yr28 are unlikely in the foreseeable future. Partial suppression of resistance in synthetic wheat derivatives carrying
Yr28 was associated with reduced transcript accumulation
11664.
YR29
| Note | Adult plant resistance 0119. |
| Chromosome | 1BL |
| Sources / synonyms | Lalbahadur(Parula 1B) 10281. |
| Varieties | Druchamp 11235; Kundan 11248. |
| Varieties (alt.) | Attila Yr27 10281; Parula Yr18 10281; Pavon F76 Yr6 Yr7 Yr30 119; Quaiu3 Yr30 10943; Saar Yr18 10481; Yr29 is completely linked with Lr46 . See |
YR30
| Note | Adult plant resistance 0120. |
| Chromosome | 3BS |
| Varieties | Opata 85 0120; Parula 0120. |
| Varieties (alt.) | Inia 66 YrA 0120; Pavon F76 Yr6 Yr7 Yr29 0120; Quaiu3 Yr29 10943; Yr30 is closely linked with Sr2 and Lr27 0120. |
According to
11773 Yr30 is present in Yaco S, Zhou8425b, Napo 63 and Orofen.
YR31
| Chromosome | 2BS |
| Varieties | Pastor 0325. |
| Marker associations | Recombination values: Yr31 – Yr27 , 0.148; Yr31 – Lr23 , 0.295; Yr27 – Lr23 , 0.1310325; Yr31 maps between Lr12 and Lr23 10928. |
YR32
| Synonym | YrCV 1430, YrCv 939 |
| Chromosome | 2AL |
| i | Avocet S[*] 4/Carstens V 970; Cook[*] 6/Carstens V 970; CRW380 = Carstens V/3*Avocet S 10016; Tres/6*/Avocet S 10016. |
| Varieties | Anouska 1430; Caribo 1430; Consort {10021, 10023}; Cyrano 1430; Danis 10023; Deben 10283; Hereward {10021, 10022}; Okapi 1430; Oxbow 10021; Senat 10016; Solist 10016; Stakado 10016; Toisondor 11144; Tres 10016; Vivant 10023; Wasmo 10016. |
| Varieties (alt.) | Carstens V Yr25 10016; Felix Yr3 1430; Kraka Yr1 {10021, 10038}; Savannah Yr1 Yr2 Yr3 Yr4 Yr17 10016; Senat Yr3 10016; Zdar Yr3a Yr4a 67. |
| Marker associations | Xwmc198-2A – 2 cM – Yr32 10016; Yr32 was coincident with one AFLP marker 10016. |
YR33
| Note | More readily detected in seedling tests at elevated temperatures 10336. |
| Chromosome | 7DL |
| Varieties | Batavia 10039; EGA Gregory; Strezecki. |
| Marker associations | Linkage with Xgwm111-7D and Xgwm437-7D 10039. |
YR34
| Synonym | Syn. Yr48 11266 |
| Chromosome | 5AL |
| Varieties | AUSC 10040; UC1110/PI610750 RIL#143 11266; AUS27492 11720; WAWHT2046 = AUS91389 10040. |
| Marker associations | Xgwm410.2-5A – 8.2 cM – B1 – 12.2 cM – Yr34 10040; Xgwm291-5A – 0.5 cM – B1 – 1.5 cM – Yr34/Xgwm410.2-5A/Xcfa21495A/KASP109/KASP6988/ etc. 11266; Xgwm291-5A – 2.3 cM – B1 – 0.7 cM – Yr34/Xgwm410.25A/Xcfa2149-5A/KASP109/KASP6988/ etc. 11266. Yr34 is in a 5AS.5AL-5A[m] L translocation |
segment that is present in genotypes Arina
LrFor and SY Mattis in the Wheat10+ Genome panel
11602. Associated with 5 markers
11720.
This gene confers a weak seedling resistance (IT 2C to 3C) and a strong adult plant resistance (0 to 10R)
10040 to Australian pathotype 134E16A+, but is not effective against Australian pathotype 110E143A+
10040.
Yr34 is <1cM from the awn inhibitor
B1 11266.
YR35
Yr36
| Note | Adult plant resistance. |
| Chromosome | 6BS |
| i | Yecora Rojo NIL PI 638740 10138. |
| Varieties | Burnside 11044; Glencross 11044; Glupro 10138; Lilian 11044; Shumai 1701 11258; Somerset 11044; UC1041+Yr36 10649. |
| itv | UC1113 NIL PI 638741 10138. |
| Type varieties | RSL#65 {623, 10138, 10649}; T. dicoccoides FA-15 10138; T. dicoccum PI 415152 {M10058}. |
| Marker associations | Yr36 is between Xucw74-6B and Xucw77-6B and 3-7 cM proximal to Nor-B2 10138; Yr36 is closely linked to the high grain protein locus of T. turgidum var. dicoccoides FA-15 10138; Nor-B2 ....Xucw68-6B – Xucw69-6B/Xbarc101-6B/Yr36 – Xucw66-6B 10272; Yr36 is 2 - 4 cM proximal to Gpc-B1 10272. |
| c | ACF33182; Yr36 encodes wheat kinase-START-1 protein 10649; WKS1 is absent in almost all modern tetraploid and common wheats 10649; Sr36 was shown to reduce the ability of the thylakoidassociated ascorbate peroxidase to detoxify reactive oxygen species 11128. Although originally described as conferring high temperature adult plant resistance. This gene confers partial resistance in both juvenile and adult plants at temperatures less than 18C 11277. |
YR37
| Note | Derived from Ae. kotschyi . |
| Chromosome | 2DL |
| Varieties | Line S14 10139. |
| ad | Line 8078 10139. |
| al | Ae. kotschyi 617 10139. |
YR38
6A (6AL-6L[sh] .6S[sh] )
10224.
YR39
| Note | HTAP resistance |
| Chromosome | 7BL |
| Varieties | Alpowa 10416. |
| Marker associations | Closely linked to several RGAP markers 10416. |
YR40
| Note | Derived from Ae. geniculata . 5DS( |
| Chromosome | 5DL |
YR41
| Synonym | YrCN19 10228 |
| Chromosome | 2BS |
| Varieties | AIM 10228; AIM6 10228; Chuannong 19 {10228, 10502}. |
| Marker associations | Complete linkage to a 391 bp allele of Xgwm410-2BS 10228; Xgwm410-2B – 0.3 cM – Yr41 10502. |
YR42
| Note | Derived from Ae. neglecta . 6A = 6AL-6[Aen] L.6[Aen] S 10537. |
| Varieties | Line 03M119-71A 10537. |
| al | Ae. neglecta 155 10537. Associated with Lr62 10537. |
YR43
| Chromosome | 2BL |
| Varieties | IDO377s = PI 591045 10673; Lolo 10673; many IDO377s derivatives 10673. |
| Marker associations | Xwms501-2B – 11.6 cM – Xwgp110-2B – 4.4 cM – Yr43 – 5.5 cM – Xwgp103-2B – 12.8 cM – Xbarc139-2B 10673. |
YR44
| Synonym | YrZak 10674 |
| Chromosome | 2BL |
| Varieties | Zak = PI 607839 10674. |
| Marker associations | XSTS7/8/Yr5 – 12.7 cM – Yr44 – 3.9 cM – Xwgp100 – 1.1 cM – Xgwm501-2B 10674. |
YR45
| Chromosome | 3DL |
| Varieties | PI 181434 10677; PI 660056 11024. |
| Marker associations | Xbarc6-3D – 0.9 cM – Xwmc656-3D – 6.9 cM – Xwpl18-3D – 4.8 cM – Yr45 – 5.8 cM – Xwp115-3D 10677. This gene is highly effective and confers resistance to all North American Pst pathotypes. |
YR46
| Note | Adult plant resistance. |
| Chromosome | 4DL |
| Chromosome bin | Distal to 0.56. |
| i | RL6077 = Thatcher*6/PI 250413 10678. |
| Varieties | Chapingo 48 11070; PI 250413 10678. |
| Marker associations | Xgwm165-4D/Xgwm192-4D – 0.4 cM – Yr46/Lr67 10678. |
| c | This multiple disease resistance locus was identified as a hexose transporter most similar to the STP13 family and containing 12 predicted transmembrane helices |
11070.
Pleiotropic or closely linked with
Sr55 and
Lr67
YR47
| Chromosome | 5BS |
| Chromosome bin | 5BS6-0.81-1.00. |
| Varieties | AUS28183 = V336 10679; AUS28187 10679. |
| Marker associations | Xgwm234-5B – 10.2 cM – Lr52 – 3.3 cM – Yr47 – 9.6 cM – Xcfb309-5B 10679; Xcfb309-5B – Xsun480/Xmag705/Xfcp552-5B – 0.4 cM – Yr47 – 4.3 cM – icg16c008/Xgwm234-5B 11200; Xsun180 – 0.4 cM – Lr52 – 0.2 cM – Yr47 – 1.4 cM – Xgwm234-5B 11200. This is a seedling resistance gene (IT 1CN), effective against the main Australian groups of Pst . V336 is the original source of Lr52. |
YR48
Adult plant resistance. [
Qyr.ucw-5AL 10705]. 5AL
10705.
YR49
| Note | Adult plant resistance. |
| Chromosome | 3DS |
| Chromosome bin | 3DS6-0.55-1.00). |
| Varieties | AvocetS[*] 3 / Chuanmai 18 AUS91433 10746. |
| Varieties (alt.) | Chuanmai 18 Yr18 10746. |
| Marker associations | Xgps7321-3D/Yr49 – 1 cM – Xgwm1613D 10746. |
YR50
| Note | Derived from Th. intermedium . |
| Chromosome | 4BL |
| Varieties | CH23310849. |
| Marker associations | cent... Xbarc1096-4B – 8.0 cM – Yr50 – 7.2 cM – Xbarc-4B 10849. The genetic distance between Yr50 and Yr62 was estimated to be 27.1±8.6 cM 11023. |
YR51
| Synonym | YrAW1 10850 |
| Chromosome | 4AL |
| Chromosome bin | 4AL4-0.80-1.00. |
| Varieties | Line 5515 AUS 91456 10850. |
| Varieties (alt.) | AUS 278589 Yr57 10850. |
| Marker associations | Xowm45F3R304A – 1.2 cM – Yr51 – 2.5 cM – Xsun104-4A – 1.8 cM – Xgwm160-4A 10850. |
YR52
| Note | Adult plant resistance. |
| Chromosome | 7BL |
| Chromosome bin | 7BL3-0.86-1.00. |
| Varieties | PI 183527 10852; PI 660057 = Avocet S/PI 183527 F4-41 10853. |
| Marker associations | Xbarc182-7B – 1.2 cM – Yr52 – 1.1 cM – Xwgp5258 – 5.7 cM – Xcfa2040-7B 10852. |
YR53
| Chromosome | 2BL |
| Chromosome bin | 2BL3-0-0.35. |
| Type varieties | PI 480148 10854. |
| Varieties | Avocet S/PI 480148 F5128 10854. |
| Marker associations | Xwmc441-2B – 5.6 cM – Yr53 – 2.7 cM – XLRRrev/NLRRrev 350 – 6.5 cM – Xwmc149-2B 10853; Yr53 was estimated to be 35 cM distal to Yr5 based on an F2 allelism test, but on an integrated map this distance was about 20 cM. |
YR54
| Note | Adult plant resistance. |
| Chromosome | 2DL |
| Varieties | Yr54 RIL GID6032209 10944; Yr54 RIL GID6032334 10944. |
| Varieties (alt.) | Quaiu3 Yr29 Yr30 {10943, 10944}. |
| Marker associations | Yr54 – 0.4 cM – Xgwm301-2D 10944. |
Yr54 could be the same as
Qyr.tam-2D in Alcedo
10945.
YR55
| Chromosome | 2DL |
| Varieties | Frelon Yr17 AUS 38882 10953. |
| Marker associations | Xmag4089-2D – 11.4 cM – Yr55 – 8.4 cM – Xmag3385-2D 10953. |
YR56
| Synonym | Qyr.sun-2A 10955 |
| Chromosome | 2AS |
| Chromosome bin | Tentatively 2AS5-0.78-1.00 10955. |
| Type varieties | AUS 91575 10955; Wollaroi (AUS 99174) 10955. |
| Marker associations | Xbarc212-2A – 3.7 cM – Xbarc124-2A – 2.1 cM – Xsun167-2A – 5.7 cM – Yr56 – 7.6 cM – Xsun168-2A – 5.0 cM – Xsun169-2A – 8.0 cM – Xgwm512-2A 10955. Wollaroi has additional APR QTL 10955. |
YR57
| Synonym | YrAW2 10963 |
| Chromosome | 3BS |
| Chromosome bin | 3BS8-0.78-1.00. |
| Varieties | AUS 91463 10963. |
| Varieties (alt.) | AUS 27858 Yr51 10963. |
| Marker associations | sts3B15 – 4.5 cM – BS00062676 – 2.3 cM – Yr57 – 2.0 cM – Xgwm3893B – 2.0 cM – Xbarc75-3B 10963; Bs0006276 – 0.3 cM – Yr57 – 1.3 cm – Xgwm389-3B – 6.1 cM – csSr2 – 2.6 cM – Xgwm533-3B 11480. |
YR58
| Note | Adult plant resistance. [ QYr.sun-3BS 10964] |
| Chromosome | 3BS |
| Chromosome bin | 3BS7-0.87-1.00. |
| Varieties | Sonora W195 AUS 19292 Yr46 {10964. |
| Marker associations | 1121669/3023704 – 3.9 cM – Yr58 – 4.6 cM – 100016328/123392 10964. |
YR59
| Note | Adult plant resistance. |
| Chromosome | 7BL |
| Chromosome bin | 7BL-0.86-1.00. |
| Varieties | Avocet S/PI 178759 F4158 10967; PI 660061; PI 178759 10966. |
| Marker associations | Xwmc557-7B – 2.2 cM – Xwgp5175 – 2.1 cM – Yr59 – 1.1 cM – Xbarc32 – 0.5 cM – Xbarc182-7B 10966. Yr59 can be detected in high temperature |
seedling tests {10966, 10967}. Yr59 is a highly effective HTAP resistance gene. Crosses with lines possessing Yr39, Yr52 or YrZH84 previously reported on chromosome 7BL segregated, indicating that they are at different loci. However, the allelism test data were based on F2 phenotypes only. The linkage order of these genes is (proximal) Yr39 – 31.2 cM – Yr52 – 5.4 cM – YrPI178759 – 6.0 cM – YrZH84 (distal).
YR60
| Chromosome | 4AL |
| Varieties | Almop, Avocet*3//Lalbmono 1B*4/Pavon GID 5934039 10968. |
| Varieties (alt.) | LB(Pavon1B) Yr29 10968. |
| Marker associations | Xwmc313/Xwmc219-4A – 0.51 cM – Yr60/Xwmc776-4A 10968. |
Yr60 was estimated to be about 10 cM distal to Yr51
YR61
| Synonym | Yrpd34 10970 |
| Chromosome | 7AS |
| Varieties | Pindong 34 10970. |
| Marker associations | Xwgp5765b – 3.9 cM – Yr61 – 1.9 cM – Xwp5467 – 12.5 cM – Xcfa2174 10970. |
YR62
| Note | Adult plant resistance. |
| Chromosome | 4BL |
| Chromosome bin | 4BL5-0.86-1.00. |
| Varieties | PI 192252 11023; PI 660060 = Avocet S/PI 192252 F4-103 11024. |
| Marker associations | IWA3611-4B – 0.8 cM – IWA4041-4B – 0.8 cM – IWA2171-4B – 0.7 cM – IWA99-4B – 1.0 cM – IWA1923-4B – 1.2 cM – Xgwm251-4B – 3.3 cM – Yr62 – 2.0 cM – Xgwm192- – 0.6 cM – Xgwm495-4B – 0.7 cM – Xgwm513-4B 11023. The genetic distance between Yr62 and Yr50 was estimated to be 27.1±8.6 cM 11023. |
YR63
| Chromosome | 7BS |
| Chromosome bin | 7BS1-0.27-1.00. |
| Varieties | AUS 27955 11027. |
| Marker associations | IWB33120 – 0.9 cM – Yr63 – 1.5 cM – IWB52844 – 10.5 cM – Xwmc606-7B 11027. sunKASP401 (0.6 Mb, CS RefSeq 2.1) – 2.1 cM – sunCSYr63 – 2.1 cM – sunKASP406_ (7.4 Mb) 11733. |
YR64
| Chromosome | 1BS |
| Chromosome bin | 1BS9-0.84-1.00. |
| Varieties | PI 660064 = Avocet S/PI 331260 10967. |
| Type varieties | PI 331260 11030. |
| Marker associations | Xbarc8-1B – 0.6 cM – Xbarc119-1B – 6.5 cM – Xgwm413-1B – 3.5 cM – Yr64 – 2.0 cM – Xgdm33-1B – 5.0 cM – Xgwm498-1B – 3.9 cM – Xcfd59- – 0.4 cM – Xgwm273-1B – 3.9 cM – Xgwm18-1B – 2.6 cM – Xbarc137-1B – centromere 11030; Yr64 is distal to Yr15 ; recombinant lines are reported in 11349. A line combing combining Yr15 and Yr64 is reported in 11618: gene order Xbarc8239 – YR15 – Xgwm413102 – YR64 – Xgwm273196 . |
YR65
| Chromosome | 1BS |
| Chromosome bin | 1BS10-0.5-centromere. |
| Varieties | AvS/PI 480016 F7-12 11030. |
| Type varieties | PI 480016 11030. |
| Marker associations | Xbarc119-1B – 6.5 cM – Xgwm413-1B – 5.5 cM – Xgdm33-1B – 4.6 cM – |
Xgwm498-1B – 3.5 cM
– Xbarc187-1B – 2.8 cM
– Xgwm273-1B – 3.7 cM
– Xgwm18-1B – 1.2 cM
– Yr65 – 2.1 cM
– Xgwm11-1B – 2.1 cM
– Xbarc137-1B – centromere
11030.
YR66
| Synonym | YrVL1 11032 |
| Chromosome | 3DS |
| Chromosome bin | 3DS6-0.55-1.00. |
| Varieties | AGG91584WHWA = MSP4543.1 11032. |
| Varieties (alt.) | VL Gehun 892 = AGG91586WHEA Yr67 11032. |
| Marker associations | KASP18087 (3.550 Mb) – 2.1 cM – Yr66 – 0.6 vM – KASP48179 11032. |
YR67
| Synonym | YrC591 11033, YrVL2 11032 |
| Chromosome | 7BL |
| Chromosome bin | 7BL10-0.78-1.00. |
| Varieties | AGG91585WHEA = MSP4543.4 11032; C306 11032; C591 {11032, 11033}. |
| Varieties (alt.) | VL Gehun 892 = AGG91586WHEA Yr66 11032. |
| Marker associations | Xbarc32-7B – 2.2 cM – Xcfa2040-7B – 8.0 cM – Yr67 – 11.7 cM – SC-P35M48 11033; KASP37096 (7.170 Mb) – 1.2 cM – Yr67 – 3.6 CM – KASP2239 7.211 MB) 11032. |
YR68 CURATOR’S NOTE: publication could not be located.
| Note | Adult plant resistance. |
| Chromosome | 4BL |
| Chromosome bin | 4BL1-0.86-1.00. |
| i | AGG91587WHEA1 = csAvYr4BL = Avocet S*5/Undesignated International Nursery ex New Zealand Entry 03.25 11051. |
| Varieties | Undesignated International Nursery ex New Zealand 03.25 11051. |
| Marker associations | IWB74301 – 0.5 cM – Yr68/IWA4640 – 0.5 cM – IWB28394 11051. |
Yr69
| Note | Derived from Thinopyrum ponticum partial amphiploid Xiaoyan 7430. |
| Synonym | YrCH86 11052 |
| Chromosome | 2AS |
| Chromosome bin | 2AS5-0.78-1.00. |
| Varieties | CH7086 11052. |
| Marker associations | Xwmc25-2A – 2.7 cM – X2AS33 – 1.9 cM – Yr69 – 3.2 cM – Xmag3807-2A 11052. |
Linked with
Yr17 : (F2 seedling test) 30.0 cM
11052. No positive evidence for a
Th. Ponticum origin was prested.
YR70
| Note | Derived from Ae. geniculata |
| Synonym | YrUmb 11055 |
| Chromosome | 5DS |
| Varieties | IL393-4, T. durum cv. WH890 / Ae. umbellulata Pau 3732 // CS Ph[I] /3/2*WL71111055. |
| al | Ae. umbellulata Pau 3732 11055. |
| Marker associations | Yr70 – 7.6 cM – Xgwm190-5D 11055; A co-segregating 450 bp Lr57-Yr40 -CAPS16 marker was present in IL393-4, but not in many Australian wheat cultivars 11055. |
Yr70 behaves as an allele of
Yr40 derived from
Ae. geniculata . The low infection types are also different. The introgression carrying the
Ae. umbellulata segment replacing terminal chromosome arm 5DS was 9.47 Mb with the break point between
TraesCS5D02G1600 and
TraesCS5G02G20010 11552. Independent mutations indicated that
Yr70 differed from
Lr76 11552.
YR71
| Note | Adult plant resistance. |
| Synonym | YrSA3 11056 |
| Chromosome | 3DL |
| Varieties | AGG91588WHEA, Sunco/Avocet S RIL4667.153.11.1 11056. |
| Varieties (alt.) | Sunco Yr18 11056. |
| Marker associations | Yr71 – 1.6 cM – IWB17207/IWB10438/IWB23615/IWB63653 – 0.5 cM – IWB57983 – 0.9 cM – IWB23518 – 2.4 cM – Xgwm114b-3D – 5.6 cM – Sr24/Lr24 11056. |
YR72
| Synonym | YrAW4 11059 |
| Chromosome | 2BL |
| Chromosome bin | 2BL5-0.59-0.89. |
| Varieties | AUS27506 11059; AUS27894 11059. |
| Marker associations | Xsun481-2BL ( wPt-665550 ) – 1.8 cM – Yr72 – 1.2 cM – IWB12294 – 1.5 cM – Xsun482-2BL ( wPt-7161 ) – 1.5 cM – IWB69000 11059. |
YR73
| Note | Complementary gene involved in the Yr specificity. |
| Chromosome | 3DL |
| Varieties (alt.) | Avocet R Yr74 11063; Anza = WW15 Yr74 11062; Banks R Yr74 11063; Condor R Yr74 11063; Egret R Yr74 11063; Funo Yr74 11062; Jupateco 73 Yr74 11062; Lerma Rojo-64 Yr74 11062. |
| Marker associations | Located and mapped by DarT-Seq markers 11062. |
YR74
| Note | Complementary gene involved in the YrA specificity. |
| Chromosome | 5BL |
| Varieties (alt.) | Avocet R Yr73 11063; Anza = WW15 Yr73 11062; Banks R Yr73 11063; Condor R Yr73 11063; Egret R Yr73 11063; Funo Yr73 11062; Jupateco 73 Yr73 11062; Lerma Rojo-64 Yr73 11062. |
| Marker associations | Located and mapped by DarT-Seq markers 11062. |
The cross Avocet R/Teal used to map Yr73 and Yr74 included a 5BL-7BL reciprocal translocation. Susceptible lines carrying the individual genes will be permanently accessioned after screening candidate lines for the Avocet R = Chinese Spring chromosome configuration. The translocated chromosomes are present in Teal and do not involve Yr74 .
Yr75
| Note | Adult plant resistance. |
| Synonym | YrAxe 11065 |
| Chromosome | 7AL |
| Chromosome bin | 7AL16-0.86-0.90. |
| Varieties | Axe/Nyabing-3 RIL#5 11065. |
| Varieties (alt.) | Axe Yr29 11065. |
| Marker associations | Xcfa2016-7A – 1.0 cM – Yr75 – 0.3 cM – IWB36240 11065. sunKASP429 / 428 – 0.1 cM – sunKASP-427 – 0.4 cM – Yr75 – 0.3 cM – sunKASP430_ 11670. |
YR76
| Synonym | YrTye 186 |
| Chromosome | 3AS |
| Chromosome | 6D |
| Chromosome bin | 3AS4-0.45-1.00 11067. |
| i | AvS*4/Tyee11067. |
| Varieties | Tyee Citr 17773 11067. |
| Varieties (alt.) | ARS-Amber 11067; Cara 11067; Chukar 11067); Hyak Yr17 (based on flanking markers) 11067. |
| Marker associations | Xbarc321-6D – 6.2 cM – Xbarc57-6D – 4.3 cM – Xwmc11-6D – 2.6 cM – Yr76 – 3.4 cM – Xwmc532-6D – 6.9 cM – Xgwm369-6D – 2.6 cM – Xbarc12-6D 11067. |
| Note | Adult plant resistance. |
| Synonym | Qyr.ucw-6D 11174 |
| Chromosome | 6DS |
| Varieties | PI 322118 11174; PI 164377 11174; PI 388095 11174; PI 520350 11174; PI 623378 11174. |
| Marker associations | Yr77 was strongly associated with IWA167 in the region Xbarc54-6D (6DS) – 15.2 cM – IWA167 (6DS) – 3.9 cM – Xcfd188-6D (6DL )11174. |
Among the listed accessions two were from India, one from Pakistan, one from Iran, and one from the USA.
YR78
| Note | Adult plant resistance. |
| Synonym | Qyr.ucw-6B 11174 |
| Chromosome | 6BS |
| Varieties | Cadenza 11591; Lancer 11591; PI 519805 11174; Spelt PI 190962 11591; Nine others 11174. |
| Marker associations | The Yr78 peak fell within a 4.3 cM interval, IWA7257 – Xwmc737-6B 11174. Yr78 was mapped to a 0.05 cM interval including the un-assembled NOR-B2 locus on chromosome 6BS (RefSeq v1.1 0 region between 101,735,482 and 112,897,900 bp) 11591. |
According to
11174 Yr78 is identical to
QYr.wgp-6BS.1 in Stephens
10602 and
QYr.sun-6B in Janz
10751.
YR79
YR80
| Note | Adult plant resistance. YrAW11 11261. |
| Chromosome | 3BL |
| Chromosome bin | 3BL2-C-0.22. |
| Varieties | AUS27284 11261. |
| Marker associations | Xgwm3763B – 15.2 cM – KASP5392/KASP65624 – 3.0 cM – Yr80 – 4.9 cM – KASP53113_ 11261. |
YR81
| Note | Adult plant resistance. YrAW5 11262. |
| Chromosome | 6AS |
| Varieties | Aus27430/AvS RIL#16 11262. |
| Varieties (alt.) | AUS27430 Yr29 11262. |
| Marker associations | KASP3077 – 2.7 cM – Yr81 – 6.4 cM – Xgwm459-6A – 1.0 cM – KASP11315 11262. |
YR82
| Chromosome | 3BL |
| Chromosome bin | 3BL7-0.63-1.00. |
| Varieties (alt.) | AUS27969 = JI 1190592 Yr29 11322. |
| Marker associations | KASP13376/sunKASP301 – 0.4 cM – sunKASP300 – 2.0 cM – Yr82 – 2.0 cM – KASP8775 11322. |
YR83
| Note | 6A (T6AL· |
| Chromosome | 6RL |
| tr | T6AL·6RL C19.3 11396. |
| ad | Wheat + 6R 11396; Wheat + 6RL 11396. |
| su | CS + 6R(6D) 11396. |
| al | Triticale accession T-701 11396. |
| Marker associations | Deletion mapping indicated that Yr83 was located in 6RL bin FL 0.73-1.00 containing PCR markers |
KU.86, TNAC1823, TNAC1826, and TNAC1844
11396.
The only previously designated
Yr gene derived from
Secale cereale is
Yr9 from chromosome 1RS.
YR84
| Note | YrPI487260 11585. |
| Chromosome | 1BS |
YR85
| Note | YrTr1 181. |
| Chromosome | 1BS |
bin : 1BS18 (0.5).
YR86
| Note | Adult plant resistance. YrZM895 11641; _QYr.caas- |
| Chromosome | 2AL |
YR87
| Note | 6B (6B-6S[sh] ) {11683, 11684, 11712}. |
| Varieties | Line 6B-RY-32-3-14 11683 = Line 42 11684 = D42 11712 = Genebank accession number to be advised . |
| al | Ae. longissima AEG-67822 11712; Ae. sharonensis AEG-548-4 11712. |
| c | The same NLR gene with a distinctive coiled-coil (CC) domain was cloned from each alien diploid accession 11712. Development of lines with shortened 6S[sh] segments is described in 11684. |
All 16 EMS-induced mutants in Line D42 were susceptible to both stripe rust and leaf rust
11712.
Sources of additional genes for seedling (designated “12”) and adult resistances (“13”, “14”, “15”) are listed in
1430.
Genotype lists: Chinese common wheats
10369. European wheats
10579. U.K. wheats
10697.
| Chromosome | 7BL |
| Varieties | Line 041133 11675. |
| Marker associations | Xicst23 (608.9 Mb, CS RefSeq 1.0) – 0.6 cM – Yr041133 – Xicst338 (609.7 Mb) 11675. |
| Note | Refers to a phenotype specificity that appears to be controlled by complementary genes 1563. |
| Varieties | Avocet[*] {[*] = heterogeneous}; Anza = Karamu = Mexicani =T4 = WW15; Banks[*] ; Condor[*] ; Cocamba; Egret[*] ; Inia 66; Lerma Rojo 64; Lerma Rojo 64A; Nainari 60; Nuri 70; Sanda 73; Sonalika; Zaminder 80. |
| Varieties (alt.) | Condor selection P44 Yr6[*] ; Pari 73 Yr6 ; Saric 70 Yr6 ; Yecora 70 Yr6 1563. The complementary genes are now named Yr73 and Yr74 . |
| Chromosome | 5DS |
| Varieties | Ae. caudata derivative PAU16060 11613. |
| al | Ae. caudata PAU3556 11613. |
| Chromosome | 1BS |
| Varieties (alt.) | Alpowa Yr39 10416. |
| Marker associations | YrAlp – 15.2 cM – Xgwm18-1B – 1.1 cM – Xgwm11-1B 10416; and more closely linked to RGAP markers 10416. |
| Chromosome | 1AL |
| Varieties | Undesignated selection. |
| Varieties (alt.) | AS1676 Yr18 11672. |
| Marker associations | Located to a 1.7 cM region – 485.3 – 490.2 Mb where it co-segregated with 6 KASP markers 11672. May be the same as YrXH-1AL in Xiaohemai based on common markers 11672. |
| Varieties | Avocet R 11007; Avocet S 11007. This designation was used to describe an assumed resistance gene in both Avocet R and Avocet S, the latter being the genetic background of the Avocet S near-isogenic lines. AvS NILs with Yr6 , Yr7 and Yr9 , as well as Avocet R, were susceptible to the variant of Pst race 6 E0 11007. |
| Chromosome | 1BS |
| Varieties | Synthetic CI142 = Gaza/Boy// Ae. tauschii 271 10667. |
| Marker associations | Located in the Yr24/Yr26 region close to Xbarc187-1B and Xgwm273-1B 10667. Although postulated to be unique this gene is likely Yr24/Yr26 . |
| Note | Yr67 . |
| Chromosome | 7BL |
| Chromosome bin | 7BL3-0.85.1.00. |
| Varieties | C591 10606; Zhongzhi 1 10606. |
| Marker associations | Xcfa20-40-7B – 8.0 cM – YrC591 – 11.7 cM – SCP35M48 10606; Xmag1714-7B – 1.2 cM – – 0.4 cM – Xbarc182-7B 11099. This gene is Yr67 11032. |
| Note | Recessive. |
| Chromosome | 2AL |
| Varieties | Changfeng 75 11646. |
| Marker associations | Located in interval 577638 Mb (CS RefSeq v1.0, flanked by AX-1110060462 and AX-111004763 11646. |
| Chromosome | 4B |
| Varieties (alt.) | Clement Yr9 186. |
| Note | Temperature sensitive 10219. |
| Chromosome | 2DS |
| Varieties | Cook Yr34 {10221, 10219, 10220}; Sunco Yr34 10220. |
| Note | Derived from S. cereale . 1B, 1BL, |
| Chromosome | 1RS |
| Varieties | Chuannong 17 10686; CN12 10562; CN17 10562; CN18 10562. |
| dv | S. cereale R14 10686. |
| al | S. cereale L155 10562. |
| Chromosome | 6A |
| Varieties | Druchamp 185. |
| Chromosome | 1A |
| Varieties (alt.) | Daws YrDa2 186. |
| Chromosome | 5D |
| Varieties (alt.) | Daws YrDa1 186. |
| Chromosome | 6B |
| Chromosome | 5B |
| Varieties | Druchamp {184, 185}. |
| Chromosome | 6A |
| Varieties | Druchamp 184. |
| Chromosome | 1BL |
| Varieties (alt.) | Express YrExp2 10601. |
| Marker associations | Xwgp78-1B – 4.2 cM – YrExp1 – 3.4 cM – Xwmc631-1B 10601. |
| Chromosome | 5BL |
| Varieties (alt.) | Express YrExp1 10601. |
| Marker associations | Xgwm639-5B – 9.2 cM – Xwgp81-5B – 1 cM – YrExp2 – 0.7 cM – Xwgp82-5B 10601. Based on the presence of the nearest flanking markers YrExp2 was postulated in Expresso, Blanca Grande, Buck Pronto and Jeff/Pronto 10601. |
| Chromosome | 2B |
| Chromosome | 2BS |
| Varieties (alt.) | Francolin#1 Yr29 {11156, 11218, 11219}. |
| Marker associations | Xgwm374-2B – 2.0 cM – YrF – 1.8 cM – Xwmc474-2B 11219. Francolin#1 is also released under the names Ufam and BARI Gom 27 11156. |
| Chromosome | 5AS |
| Chromosome bin | 5AS-0.4-0.98 11781. |
| Varieties | Flanders 11781. |
| Marker associations | Xbarc56-5A 2.0 cM – YrF – 0.6 cM – AX108925494 11781. |
| Chromosome | 1AL |
| Varieties | H901414-121-5-5-9 11100. |
| Marker associations | Xwmc469-1A – 3.4 cM – YrHA – 4.6 cM – Xgwm497-1A 11100. |
| Chromosome | 6A |
| Varieties (alt.) | Hybrid 46 Yr4b 184. Not the same gene as YrDru2 184. |
| Note | Derived from Psathyrostachys huashanica . |
| Chromosome | 3AS |
| Chromosome bin | H9020-17-25-6-4 11229. |
| Marker associations | Xcfd79-3A – 7.2 cM – YrHu – 0.7 cM – BG604577 11229. |
| Chromosome | 1B |
| Varieties | Line 03031-1-5 (ex CIMMYT) 11303. |
| Marker associations | Xgwm273-1B – 3.7 cM – Ax-109871410/Ax-109472792/Ax109352427 – 0.3 cM – YrH62 – 0.8 cM – Ax-109862469 – 2.1 cM Xbarc137-1B 11303. |
| Note | Derived from Psathyrostachys huashanica . |
| Chromosome | 2DS |
| Varieties | H9020-1-6-8-3 10979. |
| al | Psathyrostachys huashanica 0503383 10979. |
| Marker associations | Xgwm102-2D – 3.8 cM – Xgwm4552D – 5.8 cM – YrH9020 – 4.4 cM – Xgwm261-2D – 2.3 cM – Xwmc503-2D – 0.6 cM – Xcfd53-2D 10979. |
| Chromosome | 4A |
| Varieties (alt.) | Heines VII Yr2 Yr25 186. |
| Chromosome | 2AL |
| Varieties | Jimai 22 11195. |
| Marker associations | Xgwm382-2AL – 1.0 cM – YrJ22 – 7.3 cM – IWA1348 11195; The mapped region was reduced to 0.3 Mb corresponding to 340.5 kb; H736 – J22/HJ732 – H400 (768.7 – 769.0 Mb) 11679. |
| Note | QYr.nwafu-6AL 11696. |
| Chromosome | 6AL |
| Varieties (alt.) | Jimai 44 Yr29 11696. |
| Marker associations | Mapped to a 3.5 cM interval flanked by AQP markers AX-109373479 and AX-109563479 11696. |
| Note | Adult plant resistance. |
| Chromosome | 2BS |
| Chromosome bin | 2BS-1. |
| Varieties | Kenya Kuku 11034. |
| Marker associations | Xgwm148-2BS – 3.2 cM – YrKK – 1.8 cM – Xwmc474-3B 11034. Resistance conferred by YrKK at the adult stage approached immunity. A slight effect was observed on seedling response 11034. |
| Chromosome | 7BL |
| Varieties | Lankao 5 11252. Xbrac267-7B – 4.4 cM – YrLk – 3.3 cM – Xwmc396-7B 11252. |
| Note | Adult plant resistance. |
| Chromosome | 6BL |
| Varieties | Xwmc756-6B – 4.6 cM – YrLM168a – 4.6 cM – Xbarc146-6B 11284. |
| Marker associations | Xwmc756-6B – 4.6 cM – YrLM168a – 4.6 cM – Xbarc146-6B 11284. LM168a and LM168b are derivatives of Milan 11284. |
| Chromosome | 4A |
| Varieties | Minister 184. |
| Chromosome | 4B |
| Varieties (alt.) | Moro Yr10 186. |
| Marker associations | The development of an STS marker, derived from an AFLP fragment, that co-segregates with YrMor was reported in 357. |
| Chromosome | 1B |
| Varieties | Mianmai 41 11271. |
A cross with AvS+Yr26 failed to segregate. Although claimed to be a possible allele of Yr24/Yr26 the gene identified is likely to be the same.
| Chromosome | 4A |
| Varieties (alt.) | Nord Desprez Yr3a Yr4a 184. May be the same as YrMin 184. |
| Chromosome | 3BS |
| Varieties | Lgst.79-74 33. |
| Marker associations | Xgwm493 (distal) - 21 cM – Yrns-B1 33; As a QTL, Yrns-B1 was located in a 3 cM interval between Xgwm493-3B and Xgwm1329-3B 10383. |
| Chromosome | 5DS |
| Varieties | Ae. peregrina derivative PAU16058 11614. |
| al | Ae. peregrina PAU3519 11614. |
| Chromosome | 2BS |
| Varieties | P8110696; Xu29 10696. |
| Marker associations | Xgwm429-2B – 1.8 cM – YrP81 – 4.1 cM – Xwmc770-2B 10696. |
| Chromosome | 5BS |
| Varieties | PI 1388231 11543. |
| Marker associations | sunKASP338 – 3.3 cM – YrPak – 3.5 cM – sumKASP341 11543. |
PI 1388231 also carried two genes for adult plant resistance, one of which was positive with
Lr46 marker
Lr46SNP1G22_
11543.
| Synonym | QYr.uga-2AS 10914 |
| Chromosome | 2AS |
| Varieties | Pioneer 26R61 = PI 612056 10914. |
| Note | Derived from S. cereale 1B, |
| Chromosome | 1BL |
| Chromosome | 1RS |
| Varieties | R185 10562; R205 10562; R212 10562. |
| al | S. cereale R212 10562. |
| Chromosome | 3B |
| Varieties | Stephens 185. |
| Chromosome | 2BL |
| Chromosome bin | 2BL0.89-1.0010618. |
| Varieties | S219910618. |
| Marker associations | Xgwm120-3B – 11.0 cM – YrS2199 – 0.7 cM – Xdp269-2B 10618. |
| Chromosome | 2B |
| Varieties | Stephens 184. |
| Note | Stephens 184 |
| Chromosome | 3B |
| Chromosome | 5BL |
| i | Taichung 29*6/Strubes Dickkopf 11085. |
| Varieties | Strubes Dickkopf 11085. |
| Marker associations | Xwmc640-5B – 3.6 cM – YrSD – 2.4 cM – Xbarc59-5B – 3.0 cM – Xwmc783-5B 11085. The authors concluded that this gene was different from Yr25 , which was located in chromosome 1D 158. |
| Chromosome | 2BS |
| Chromosome bin | 2BL-C-0.5. |
| i | Cx1 = Avocet S*4/Spaldings Prolific 10018. |
| Varieties (alt.) | Spaldings Prolific Yr25 10018. |
| Marker associations | IWA638 – 0.6 cM – YrSP – 1.5 cM – dp269-2 – 1.9 cM – Xwmc332-2B 11091.MOVE TO YR5 |
| Note | Allelic with Yr5 and Yr7 10759 |
| Synonym | YrSP 10018 |
| Chromosome | 2B |
Probably 2BL.
| Chromosome | 6D |
| Varieties (alt.) | Tres YrTr2 186. |
| Chromosome | 3A |
| Varieties (alt.) | Tres YrTr1 186. |
| Chromosome | 6D |
| Varieties | Tyee 186. |
| Note | TuG1812G0500003718 . |
| Chromosome | 5AL |
| Chromosome bin | 5AL10-0.57-0.78. |
| dv | T. urartu PI 428309 11494. |
| Marker associations | Xgwm186-5A – 30.5 cM – Yru1 – 10.8 cM – Xgpw7007-5A , then fine mapped with 82 additional polymorphic markers 11494. |
| c | Yru1 has as NBS-LRR structure with N-terminal ankyrin and C-terminal WRKY repeats 11494. GenBank MT018453. |
The
Yru resistance allele was present in a number of
T. urartu accessions, but not in G1812
11494.
| Note | Presumed to be Yr3a . |
| Chromosome | 2B |
| Varieties | Vilmorin 23 10370; Vilmorin 184. Allelic but not the same as YrSte 184. |
| Note | Recessive. |
| Chromosome | 3BS |
| Varieties | Wuhan 2 11150. |
| Marker associations | Xwmc540-3B – 5.9 cM – Yrwh2 – 10 cM – Xgwm566-3B 11150. |
| Note | High temperature resistance. |
| Varieties | Mingxian 169/Xiaoyan 54 F3-4-14 10829. |
| Varieties (alt.) | Xiaoyan 54 Yrxy2 10829. |
| Marker associations | Xbarc49-7AS – 15.8 cM – Yrxy1 with closer flanking RGA markers 10829. |
| Note | High temperature resistance. |
| Varieties | Mingxian 169/Xiaoyan 54 F3-4-30 10829. |
| Varieties (alt.) | Xiaoyan 54 Yrxy1 10829. |
| Marker associations | Xwmc794-2AS – 4.0 cM – Yrxy2 – 6.4 cM – Xbarc5-2AL 10829. |
| Chromosome | 4B |
| Varieties (alt.) | Yamhill Yr2 Yr3a Yr4a 185. |
| Chromosome | 4BL |
| Varieties | Zhoumai 22 11563. |
| Marker associations | XWGGB133 – 3.29 cM – YrGH22 – 2.63 cM – XWGGB146 11563. YrZH22 could not be distinguished from Yr50 based on map location. |
| Chromosome | 7BL |
| Varieties | Annong 7959 10331; Zhoumai 11 10331; Zhoumai 12 10331. |
| Varieties (alt.) | Zhou 8425B Yr9 10331. |
| Marker associations | Xwmc276-7B – 0.6 cM – Xcfa2040- – YrZH84 – 4.8 cM – Xbarc32-7B 10331. |
3.22. Reaction to Puccinia triticina⌂ Home
Disease: Brown rust, leaf rust.
LR1
| Chromosome | 5D |
| Chromosome | 5DL |
| Chromosome | 1B |
| i | Centenario/6[*] Thatcher 317; Malakoff/6[*] Prelude 317; Wichita[*] 4/Malakoff 613. |
| Varieties | Line 87E03-S2B1 10561; Centenario 317; Chicora 'S' 143; Daws (heterogeneous) 1019; Dirkwin 1019; Glenlea {976, 1255}; Halle 9H37 74; Hyslop 1019; Luke {heterogeneous}1019; Malakoff 47; McDermid 1019; Mexico 120 933; Newton 1023, 1024, 143; Norco 1019; Shabati Sonora 842; Sonora 64 842; Tarsa 842; Uruguay 954; Walliday 1019. |
| Varieties (alt.) | Blueboy Lr10 143; Blueboy II Lr10 Lr24 143; Erythrospermum 142 and 953 Lr3 74; Laura Lr10 Lr34 712; Norka Lr20 1552; Plainsman V Lr3 1024; Suneca Lr13 485. |
| dv | Several Ae. tauschii accessions 10191. |
| Marker associations | Co-seg. with Xpsr5675D and Xglk621-5D in a Frisal/ Lr1 resistant line. pTAG621 was converted to a diagnostic STS354; Terminally located10189; In Ae. tauschii recombination in the region was 5-10X that in common wheat, gene order Xpsr567-5D - Lr1 - Xabc718-5D 10191; Mapped to a 0.7 cM interval in Ae. tauschii and a 0.075 cM interval in wheat 10408; A candidate gene for Lr1, Lr1RGA1 , encoding a CC-NBSLRR protein, cosegregated with Lr1 10408; Co-segregation with RGA567-510561. |
| c | Lr1 is a member of a multigene family (PSR567), has a CC-NBS-LRR structure, and produces a protein of 1,344 aa, EF567063 10561. |
| Chromosome | 1B |
| Chromosome | 2DS |
| Synonym | Lr2 47 |
| i | Prelude[*] 6/Webster 320; Red Bobs[*] 6/Webster 320; Webster/6[*] Thatcher RL6016 306; Wichita[*] 4/Webster 613. |
| Varieties | EurekRRa CI 17738 143; Festiguay 843; Webster CI 3780 47; Common in the Canadian Western Spring Wheat (CWSW) cultivars 11700. |
| Varieties (alt.) | Alex Lr10 976; Ck 9835 Lr9 10146; Ck 9663 Lr2 Lr10 10146; Guard Lr10c 976; James Lr10 976; Len Lr10 976; Marshall Lr10 976; Mediterranean W1728 Lr3 1369; Shield Lr3 Lr10 198; Waldron Lr10 143. |
| Marker associations | Flanked by KASP markers kwm1620 (64.455 Mb, CS REFSeq 2.1.) and kwm1623 (64.760 Mb) 11700. |
| Synonym | Lr2[2 ] 1409 |
| i | Prelude[*] 6/Carina 320; Red Bobs[*] 6/Carina 320; Thatcher[*] 6/Carina 320; Wichita/4[*] Carina 613. |
| Varieties | Carina 613. |
| Synonym | Lr2[3 ] 1409 |
| i | Prelude[*] 5/Brevit 320; Prelude[*] 6/Loros 320; Red Bobs[*] 6/Brevit 320; Red Bobs[*] 6/Loros 320; Thatcher[*] 4/Brevit 320; Thatcher[*] 6/Loros 320; Wichita[*] 4/Brevit 613; Wichita[*] 4/Loros 613. |
| Varieties | Brevit 613; Loros {1257, 317}. |
Because
Lr3 appears to be a complex locus
486 Democrat and Democrat/6[*] Thatcher should be accepted as standards. There is evidence to suggest that the allele in Mentana, and therefore many derivatives, is
Lr3b 939. If this is correct, many genotypes listed under
Lr3a are likely to be
Lr3b . Durum cv. Storlom likely carries
Lr3a or
Lr3b 10469. Cv. Camayo was considered to have a closely linked gene, or
Lr3 allele
10469. Resistance in Storlom co-segregated with an STS derivative of
Xmwg798-6B . All three Thatcher NILs with named
Lr3 alleles carried the STS marker
10469.
| Synonym | Lr3 47 |
| Chromosome | 6B |
| Chromosome | 6BL |
| i | Democrat/6[*] Thatcher 318; Wichita[*] 4/ Mediterranean 613. |
| Varieties | Belocerkovskaja 289 74; Bennett 1024; Democrat 47; Fertodi 293 74; Gage 1024; Hana 68; Homestead 1024; Ilyitchovka 75; Juna 75; Jubilejne 68; Kawvale 143; Lancota 1024; Mara 68; Mediterranean 47; Mediterranean W3732 1369; Mentana 842; Mironovskaya 264 & 808 74; Odra 75; Osetinskaya 74; Ottawa 143; Pawnee 1408; Ponca 143; Rannaja 12 74; Shawnee 143; Shirahada 842; Sinvalocho MA 10929; Skorospelka 3b 74; Sledkovicova K1004 74; Viginta 68; Warrior {1024, 143}; Yubileynaya 75. |
| Varieties (alt.) | Amika Lr26 76; Bezostaya 1 Lr34 74; Bowie Lr14b 319; Erythrospermum 142 & 953 Lr1 74; Istra Lr26 76; Mediterranean W1728 Lr2a 1369; Plainsman V Lr1 1024; Shield Lr2a Lr10 198; Solaris Lr26 76; See also 69. |
| Type varieties | Storlom 10469. |
| Marker associations | Co-segregation with Xmwg798-6B {10469, 9921}; cDNA marker TaR16 was completely linked to Lr3 in a population of 109 gametes 10058; UBC840 540 - Lr3a , 6 cM 10263. |
| Synonym | Lr3bg 486 |
| i | Thatcher[*] 6/Bage; RL6094 = Tc[*] 6/T6 307. |
| Varieties | Bage 486. |
| Varieties (alt.) | T6 Lr16 307. Durum cv. Storlom likely carries Lr3a or Lr3b 10469. Cv. Camayo was considered to have a closely linked gene, or Lr3 allele 10469. Resistance in Storlom co-segregated with an STS derivative of Xmwg798-6B . All three Thatcher NILs with named Lr3 alleles carried the STS marker 10469. |
| Synonym | Lr3ka 486 |
| i | Tc[*] 6/Klein Aniversario. |
| Varieties | Blava 10345; CI 13227 11021; Klein Aniversario 486. |
| i | RL6062, Thatcher*6/PI 268316 11054. |
| Varieties | PI 268316 11054. |
| Varieties | Purdue Selection 3369-61-1-10 = Waban365; Not available as separate single-gene lines. Therefore, alleles at these predicted loci were never characterized. |
LR9
| Note | Derived from Ae. umbellulata . 6BL = T |
| Chromosome | 6BS |
LR10
| Note | A receptor-like kinase. The locus Xsfr1(Lrk10)-1A , detected by the probe Lrk10, is completely linked with Lr10 in chromosome |
| Chromosome | 1AS |
The gene encodes a receptor-like kinase with extracellular and kinase domains
0297. Using probe pLrk10-A, developed from the extracellular domain, 6
homologues were found in chromosomes 1A (1), 1B (3) and 1D (2) as well as group 1 chromosomes of
T. monococcum ,
Ae. tauschii and barley {0296, 0294}. Probes based on the kinase domain identified further homologues in chromosomes 3AS and 3BS as well as the corresponding regions in rice and maize
0294. Both orthologous and paralogous evolution were suggested.
LR11
| Synonym | LrBP2 11074 |
| Chromosome | 2DS |
| Chromosome | 2A |
| i | Thatcher[*] 6/Hussar 306; Wichita[*] 4/Hussar 613. |
| Varieties | Bulgaria 88 142; Hart 1024; Hazen 49; Hussar 1409; Panola 10830; Pioneer 2850; Pocahontas 10146; Saluda {10699, 10146}. |
| Varieties (alt.) | Buck Poncho Lr10 11074; Ck9803 Lr18 10595; FFR 524 Lr18 10595; Jamestown Lr18 10830; Karl 92 Lr3 Lr10 2101; Oasis Lr9 143; Pioneer 2684 Lr18 10595; SS520 Lr18 10595. |
| Marker associations | Lr11 – 0.3 cM – SCAR32/35 – 1.6 cM – Xgwm614-2D 11074. |
LR12
| Note | Adult plant reaction. |
| Chromosome | 4B |
| Chromosome | 4BL |
| Chromosome bin | 4BL5-0.86-1.00. |
| i | Exchange/6[*] Thatcher 306. |
| Varieties | Opal 306. |
| Varieties (alt.) | AC Domain Lr10 Lr34 228; Caldwell Lr14a 10787; Chinese Spring Lr34 301; Exchange Lr10 Lr16 326; Sturdy Lr13 301; Unknown accessions 208. |
| Marker associations | Xgwm251-4B – 0.9 cM – Lr12 – 1.9 cM – Xgwm149-4B 10951. Possible commonality with Lr31 . |
**LR13** TraesCS2B01G182800 {11530, 11531}; also predicted in
11529.
| Note | Although originally described as a gene for adult plant reaction 032, 326, Lr13 can be detected at the seedling stage especially at high temperatures {939, 1156}. |
| Synonym | LrZH22 {11467, 11468}; LrLC10 11468 |
| Chromosome | 2BS |
| i | Tc[*] 7/Frontana = RL4031 306; fifteen Thatcher lines with 2-gene combinations 711. |
| Chromosome bin | 2BS1-0.35-0.75. |
| Varieties | This gene is very widespread 939; Hereward 288; Hustler 608; Kinsman 608; Kenya Plume 1370; Liaochen 10 {11468, 11530}; Manitou 326; Mardler 608; Maris Huntsman 608; Moulin 288; Napayo 70; Neepawa 143; Norman 608; Pastiche 288; Polk 143; Virtue 608; Zhoumai 22 {11467, 11468, 11531}. |
| Varieties (alt.) | AC Barrie Lr6 10178; Beaver Lr26 1032; BH1146 Lr34 268; Biggar Lr14a 712; Chris Lr34 ; Columbus Lr16 1258; Cumpas 88 Lr26 1373; Era Lr1 0 143; Frontana Lr34 32, 1374, 326; Genesis Lr14a 712; Hartog Lr1 Lr46 127; Hobbit Lr17a 608; Hobbit Sib Lr17a 1350; Inia 66 Lr14a Lr17 1373; Klein Aniversario Lr3ka 32; Kenyon Lr16 300; Lerma Rojo 64 Lr17a Lr34 1373; Oasis 86 Lr19 1373; Parula Lr34 Lr46 1374; Suneca Lr1 485; Yecora Lr1 1374. |
| Marker associations | Xpsr912-2B – 9.1 cM – Lr13 – 7.9 cM – Xbcd1709-2B – 9.8 cM – Cent. 88; Lr13 – 10.7 and 10.3 cM – Xgwm630-2BS 10463; Xbarc163-2B – 5.1 cM – Lr13 – 8.7 cM – Xstm773b-2B 329; Xbarc55-2B – 1.1 cM – Xkwh37 – 4.9 cM – Lr13 – 5.8 cM – Xgpw1109 – 3.7 cM – Xbarc18-2B 11068; Xbarc55-2B – 2.4 cM – LrZH22 – 4.8 cM – Xgwm374-2B 11467; Xbarc55-2B – 2.2 cM – XCAUT163 – 1.10 cM – LrLC10 – 0.55 cM – Lseq22 – 6.05 cM – Xbarc18-2B 11468. |
| c | Encodes a CC-NBSLRR protein {11531; 11532} that is identical to that produced by one of the Ne2m haplotypes 11531. |
GenBank MW756036
11532.
Lr13 is an allele of the
YR27/NE2 locus
11593. Pleiotropic with the specific
Ne2m allele at the
NE2 locus.
| Synonym | LrLla 10520 |
| Chromosome | 7B |
| Chromosome | 7BL |
| Chromosome bin | 7BL10-0.78-1.00. |
| i | Selkirk/6[*] Thatcher 319; Arina LrFor 11549. |
| Sources / synonyms | CS[*] 6/Hope 7B 964. |
| Varieties | Aotea 964; Brigand 608; Gala 964; Glenwari 964; Hofed 964; Hope 964; H-44 964; Lawrence 964; Redman 964; Regent 964; Renown 964; Spica 964. |
| Varieties (alt.) | Biggar Lr13 712; Brambling Lr23 Lr34 10563; Caldwell Lr12 10787; Genesis Lr13 712; Inia 66 Lr13 Lr17a 939; Selkirk Lr10 Lr16 319. |
| Type varieties | Arcangelo 11015; Bicre 11015; Creso 11015; Colosseo 11015; Italo 11015; Lloreta INIA 10520; Plinio 11015; Somateria 10520. |
| Varieties (alt.) | Forno Lr34 Lr75 11549. |
| Marker associations | Xwmc273-7B – 13 cM – Lr14a – 10 cM – Xgwm344-7B 10520; Xwmc10/Xgwm344/wPt1085-7B – 1.1 cM – wPt4038-HRM – 0.1 cM – Lr14a – 1.0 cM – wPt4140-HRM 11015. |
The
Lr14 region in tetraploid wheat harbours
Qlr.ubo-7B.2 , a gene that confers durable resistance in durums {10734, 10736} and that is present in many Italian, CIMMYT and ICARDA durum cultivars
10736. The relationship of this gene described as
Lr14c (reference genotype Creso) in
10735 remains to be determined. Reasons for considering
Lr14c as a unique allele are given in
10735 but according to
11518 the gene sequence in Creso is identical to that of
Lr14a . In association mapping the presence of
QLr.ubo-7B.2 was predicted with 96% accuracy based on appropriate alleles of
Xcfa2257.2, Xgwm344.2 and
Xwmc10 in the distal region of chromosome 7BL
10736.
| i | Maria Escobar/6[*] Thatcher 319. |
| Varieties | Weebill 1 10571. |
| Varieties (alt.) | Bowie Lr3 ; CI 13227 Lr68 10817; Maria Escobar Lr17 319; Rafaela Lr17 314. |
Most accessions with
Lr14b , including the Tc NILs probably carry APR gene
Lr68 10817 which could be the same as
QLr.osu-7BL 10817. A marker based on the
Lr14a sequence failed to amplify a product in the Tc+14b NIL
11549.
| i | Lr14a/6[*] Thatcher//Lr14b/6[*] Thatcher Seln 319. |
LR15
| Note | 2DS 942, 843. |
| i | Thatcher[*] 6/Kenya W1483 306. |
| Chromosome bin | 2DS1-0.33-0.47. |
| Varieties | Kenya W1483 843. |
| Marker associations | Xgwm4562-2D – 3.1 cM – Lr15 – 9.3 cM – Xgwm102-2D 11234; Xwmc764-2B – 9.4 cM – Lr16 – 1.4 cM – Xwmc661-2B 11219. Probably allelic with Lr2 . |
| Note | The following chromosome locations are consistant with the finding that the first location was based on the use of a Rescue monosomic series. Rescue differs from CS by a 2B-4B translocation 939. Lr16 is always asociated with Sr23 . |
| Synonym | LrE 31 |
| Chromosome | 4B |
| Chromosome | 2BS |
| i | Exchange/6[*] Thatcher 306; RL6096 = Tc[*] 6/T6 307. |
| Varieties | AC Domain 10170; AC Foremost 10170; Arapahoe 2101; Brule 2101; Ciano 79 1373; Etoile de Choisy 74; Imuris 79 1373; McKenzie 10170; Millenium 2101; Papago 86 1373; Redland 2101; Vista 2101; Waxwing 11267. |
| Varieties (alt.) | AC Barrie Lr13 10178; Columbus (heterogeneous) Lr13 1258; Exchange Lr10 Lr12 31; Kenyon Lr13 300; Francolin#1 Lr46 11219; Selkirk Lr10 Lr14a 31; T6 Lr3bg 307; Warden Lr10 31. |
| Marker associations | Distally located: Lr16 – Xwmc764-2 , 1, 9 and 3 cM, respectively, in crosses RL4452/AC Domain, BW278/AC Foremost and HY644/McKenzie {10189, 10170}. |
A recessive gene LrCH1539 in accession CH1539, flanked by markers scau2BS81 (6.227 Mb, CS RefSeq 1.0) and scau2BS47 (7.006 Mb) was located at the same position as Lr16 {11680|.
LR17
| Synonym | Lr17 |
| Chromosome | 2A |
| Chromosome | 2AS |
| Chromosome bin | 2AS-5 10572. |
| i | Klein Lucero/6[*] Prelude 318; Klein Lucero/6[*] Thatcher 318; Maria Escobar/4[*] Thatcher 318. |
| Varieties | CDS Stanley 11579; EAP 26127314; Jagger 10346, 338, 10146; Jupateco 939; Klein Lucero 318; Mace 11579; Santa Fe 10830; TAM111 10595; SY Mattis 11579; Trego 10572. |
| Varieties (alt.) | Fuller Lr39 10699; Inia 66 Lr13 Lr14a ; Jagger Lr37 11328; Lerma Rojo 64 Lr13 Lr34 1373; Maria Escobar Lr14b 318; Rafaela Lr14b 314. |
| Marker associations | Xbarc123-2A – 4.8 cM – Xgwm636-2A – 4.0 cM – Lr17a 10571; Xgwm614-2A – 0.7 cM – Lr17a – Xwmc407-2A 10572; Lr17a – 3.7 cM – Xbarc212-2a 10795. |
| Synonym | WBR2 615, LrH 970 |
| Chromosome | 2A |
| Varieties | Brock 260; Harrier 1350; Maris Fundin 1350; Norin 10-Brevor, 14 1350; Norman 1350. |
| Varieties (alt.) | Contra Lr13 10345; Hobbit Sib = Dwarf A Lr13 1350; Kalasz Lr13 10345; Riband Lr13 10345; Sarka Lr13 10345; Tarso Lr26 229. |
LR18
| Note | Derived from T. timopheevii . Independently derived lines with Lr18 possess a unique N band terminally located in chromosome |
| Chromosome | 5BL |
Low seedling responses conferred by
Lr18 are most effective at 15-18C. With increasing temperatures the response becomes less effective and ineffective at 25-27C
935, see also,
1614. 5BL
935 = T5BS.5BL-5G#1L
389.
LR19
| Note | Derived from Th. elongatum .
7DL = T |
| Chromosome | 7DS |
LR20
| Chromosome | 7AL |
| i | Thatcher+Lr20. |
| Sources / synonyms | CS[*] 5/Axminster 7A 1293. |
| Varieties | Axminster 1175, 1305, 348; Birdproof 1554; Bonus 1554; Converse 1554; Festival 1554; Kenora 1554; Kenya W744 1554; Maris Halberd 608; Normandie {1554, 348}; Sappo 608; Sicco |
310; Thew {140, 1552}; Timmo
608.
LR21
| Synonym | Lr40 {10415, 1200} |
| Chromosome | 1DL |
| Chromosome | 1D |
| Chromosome | 1DS |
| i | Thatcher[*] 6/Tetra Canthatch/ Ae. tauschii var. meyeri RL 5289 306. |
| Varieties | Barlow 11093; Faller 11093; Tetra Canthatch/ Ae. tauschii var. meyeri RL 5289, RL 5406 648; Lovitt 10766; McKenzie {228, 10766}; Prosper 11093; WGRC2 = TA1649/3* Wichita 299; WGRC7 = Wichita/TA1649//2*Wichita 299. |
| Varieties (alt.) | AC Cora Lr13 713; WGRC16 = TAM107*3/ Ae. tauschii TA 2460 Lr39 10415, 220. |
| dv | Ae. tauschii accessions: RL5289 = TA15991241; Ae. tauschii TA2460 Lr39 10415, 220; TA1649 299; TA1691 299; TA2378 299; TA2470 299; TA2483 299; TA2495 299; TA2527 299; TA2528 299. |
| Marker associations | All members of the Lr21 family carry a STS derivative of XksuD14-1D that has a resistance gene analogue structure 299; XksuD14-1D was reported to map 1.8 cM proximal to Lr21 in375; Lr21 – 0 cM – rgaYr10b – 0.6 cM – Xgdm33-1D 360; Xksu-1D is part of Lr21 10420. |
| c | Lr21 was cloned and shown to have a NBS-LRR structure 10420. Lr21 -mediated resistance requires expression of RAR1, SGT1 and HSP90 11274. |
A reconstituted effective
Lr21 allele (designated
Lr21-b ) was obtained as a rare (1/5,872) recombinant (accession TA4446) between
Lr21 pseudogenes in common wheat cultivars Fielder and Wichita
10620. Further haplotype analyses are reported in
10766.
A further spontaneous allele designated
Lr21-tbk with ‘several mutations in exons 2 and 3’ leading to three amino acid changes was identified cv. Tobak
11762.
LR22
| Note | Adult plant reaction. |
| Chromosome | 2DS |
| i | Neepawa*6/RL5404, RL4495 10467; Thatcher[*] 3//Tetra Canthatch/ Ae. squarrosa var. strangulata RL 5271 306; Thatcher*7//TetraCanthatch/RL5271, RL 6044 10467; CH Campala Lr22a 11209. |
| Varieties | Line 98B34-T4B 10467; Tetra Canthatch/ Ae. squarrosa var. strangulata RL 5271, RL 5404 311. |
| Varieties (alt.) | AC Minto Lr11 Lr13 713. |
| dv | Ae. squarrosa var. strangulata RL 5271. |
| Marker associations | Xgwm296-2DS – 2.0 cM – Lr22a 10446; Xgwm455-2D – 1.5 cM – Lr22a – 2.9 cM – Xgwm296-2D 10467; Xgwm455-2D **– |
| Note | Adult plant reaction. |
| Varieties | Canthatch 298; Marquis 970; Thatcher 298. This gene will be present in near-isogenic lines based on Thatcher. |
LR23
| Synonym | LrG 951 |
| Chromosome | 2BS |
| i | Lee FL 310/6[*] Thatcher 948. |
| Sources / synonyms | CS[*] 7/Kenya Farmer 2B 948; CS[*] 6/Timstein 2B 948. |
| Varieties | BT-Schomburhk 11601; Cranbrook; Crim 1091; Hope/Timstein 1091; I 310678 1091; I 310685 1091; I 349162 1091; IWP94 10569; K 45973 1091; K 51070 1091; Rocta 1091. |
| Varieties (alt.) | Gamenya Lr3 1552; Gabo Lr10 1552; Kenya Farmer Lr10 1552; Lee Lr10 1552; Pastor Lr46 10928; Timstein Lr10 1552; Brambling Lr14a Lr34 10563. |
| Type varieties | Altar 84 1058: Gaza 11601; Tamoroi 11601. |
| Marker associations | Associated with Xksu904(Per2)-2B 90; SSR and KASP markers were developed in 11601. A QTL, which is likely to correspond to Lr23 , was identified in the Opata 85/W-7984 (ITMI) RIL mapping population. The resistance was contributed by W-7974 0090. |
LR24
| Note | Derived from Thin. elongatum .
Always present with Sr24 956. See Sr24 (Reaction to P. graminis ). |
| Synonym | LrAg 141 |
| Chromosome | 3DL |
| i | Tc+Lr24 (ex Agent). |
| Varieties | Cody 1284; Cutter 10595; Jagalene 10595; McCormick 10595; Ogallala 10595; Osage 143; Payne {1390, 1024}; SST 23 1324; SST 44 = T4R 1324; Timpaw 1255; Torres 128; Wanken 1255; Australian genotypes 340. |
| Varieties (alt.) | Blueboy II Lr1 Lr10 141; Fox Lr10 141; Lockett Lr9 10146; Parker 76 Lr10 {1024, 143}; Siouxland Lr26 1283. |
| Marker associations | Co-seg of Lr24 in Agent with 8 RFLP markers; segment in Sears' 3D-3Ag#1 is shorter than in Agent 48; Tagged with Xpsr1203-6B 1271; cosegregation with RAPD marker that was converted to a SCAR 231; Linked with SCAR marker SCS73719 earlier thought to tag Lr19 10147. Australian white seeded cultivars with Lr24 were recombinants derived from Sears’ translocation lines 3Ag#3 and 3Ag#14. |
LR25
| Note | Derived from S. cereale cv. Rosen. 4BS389, 271, 270, 380. Revised to T |
| Chromosome | 4BS |
4BL-5RL
543 and later to T4BS.4BL-2R#1L.
LR26
| Note | Derived from S. cereale . See also Reaction to P. graminis, Sr31 ; Reaction to P. striiformis, Lr26 . T |
| Chromosome | 1BL |
| Chromosome | 1RS |
1R (1B).
LR27
| Note | One of two complementary genes; the second gene, Lr31 , is located in chromosome |
| Chromosome | 4BS |
The following wheats have both
Lr27 and
Lr31 .
Lr27 is present in wheats with
Sr2 , but is not expressed in the absence of the complementary factor
1366. [
LrGt 1366,
A {1058, 1366}]. 3BS
1367.
LR28
| Note | Derived from Ae. speltoides . 4AL 967 = T |
| Chromosome | 4AS |
LR29
| Note | Derived from Th. elongatum . 7DS 939 = T7DL-7Ae# |
| Chromosome | 1S |
| i | Sears' CS 7D/ Ag #11 {1300, 939}; RL6080 = Tc[*] 6/Sears' 7D/Ag#11 316. |
| Marker associations | Co-segregation with two RAPDs 1165. |
LR30
| Note | Recessive 315. |
| Synonym | LrT |
| Chromosome | 4AL |
| i | RL 6049 = Thatcher[*] 6/Terenzio 315. |
| Varieties (alt.) | Terenzio Lr34 315. |
LR31
| Note | One of two complementary genes, the second gene is Lr27 . |
| Synonym | B {1058, 1366} |
| Chromosome | 4BL |
| Varieties | Ocoroni 86 1373. |
| Varieties (alt.) | Chinese Spring Lr12 Lr34 1367; See Lr27 for list of wheats with Lr27 +Lr31 . |
| Type varieties | Benimichi C2004 10585; Jupare C2001 10585. |
| Marker associations | A positive association with XksuG10-4B 1058. |
Possible commonality with Lr12 .
LR32
| Chromosome | 3D |
| Chromosome | 3DS |
| i | RL6086 = Tc*7/RL5713/Marquis K 10874; BW196 = Katepwa*6/RL5713/2*Marquis K 10874. |
| Varieties | Tetra Canthatch/ Ae. tauschii RL5497-1, RL5713, |
LR33
| Chromosome | 1BL |
| i | RL6057 = Tc[*] 6/PI 58548 {325, 297, 321}. |
| Varieties | PI 268454a 297; PI 58548 {325, 297}. |
| Varieties (alt.) | KU168-2 Lr34 11687; PI 268316 Lr2c Lr34 297; Others 1322. |
| Marker associations | KASP markers flanking Lr33 in the centromeric region were identified in 11687. |
| Note | In addition to conferring seedling and adult plant resistance, Lr34 responds in a complementary manner when combined with either Lr33 or LrT3 321. In the Thatcher background, Lr34 is associated with increased resistance to stem rust 299, 321. Although the resistance gene in the near-isogenic Thatcher line, RL6077, was considered to be Lr34 on the basis of disease response, leaf tip necrosis and its association with resistance to stripe rust, a cross with RL6058 segregated for two genes. A translocation to another chromosome was suggested 324. |
| Synonym | LrT2 321 |
LR35
| Note | Derived from Ae. speltoides 651. Adult plant resistance 651. 2B 651 = 2BL-2SL2SS#2.2SL#2 11037. |
| i | RL6082 = Thatcher*7/RL5711 11037. |
| Varieties | RL5711 651. |
| Marker associations | A. SCAR marker was developed 9923. |
Complete cosegregation between
Lr35 and RFLP loci
Xwg996-2B ,
Xpsr540-2B and
Xbcd260-2B was observed. The RFLP probe BCD260 was converted to a CAPS and STS marker
0045. Lines with shortened alien segments are reported in
10741.
Lines with shortened alien segments bearing
Lr35 are described in
10741.
LR36
| Note | Derived from Ae. speltoides . |
| Chromosome | 6BS |
| Varieties | CDC Bounty 11253; Line 2-9-2 292; Line E84018 292. |
| al | Ae. speltoides Popn. 2 292. |
| Marker associations | Xcfd13-6 **– |
LR37
| Note | Derived from Ae. ventricosa . Recessive 667. Lr37 can be detected in seedlings at low temperatures (17[o] C) and is effective in adult plants under field conditions. See also Sr38 (Reaction to P. graminis ) and Yr17 (Reaction to P. striiformis ) |
| Chromosome | 2AS |
6M[v] = 2MS-6MS.6ML or 2MS-6ML.6MS
0009.
VPM1 and derivatives: 2AS
62 = 2AL.2AS-2N[v] S
0213
LR38
| Note | Derived from Th. Intermedium . 1DL = T |
| Chromosome | 1DS |
LR39
| Note | Derived from Ae. tauschii 02100. Lr41 215. LrT 11207. |
| Chromosome | 2DS |
| i | TC*4 / Overley, GSTR 447 11498. |
| Varieties | Amour 11086; Bullet 11086; Fuller 10595; KS90WGRC10 = TAM107[*] 3/ Ae. tauschii TA2460 220; Overley {10595, 10699}; Postrack 10830; PostRock 11093; PBW114 / Ae. tauschii PAU14195 // 4*WH542 backcross selections 11207; TAM112 {11086; TA4186 = TA1675[*] 2/Wichita 02100; Thunderbolt02100; Winterhawk 11086. |
| Varieties (alt.) | Fuller Lr17a 10699; WGRC16=TAM107*3/ Ae. tauschii TA 2460 220. |
| dv | Ae. tauschi PAU14195 11207; Ae. tauschii TA 1675 2100; Ae. tauschii TA2460 Lr21 {10415, 220}; Lr21 10415,220. **ma: |
LR41 Deleted , see LR39 .
| Chromosome | 1D |
| i | TC*4 / Century, GSTR 448 11498; Tc + Lr42 PI 701841 {J. Kolmer pers. com Feb 2023}. |
| Varieties | AR93005 10840; Fannin 10595; KS93U50 {M22059}. |
| Varieties (alt.) | KS91WGRC11 |
LR44
| Chromosome | 1B |
| i | RL6147 = Thatcher[*] 6/ T. spelta 7831 322. |
| Varieties | T. spelta 7831 322; T. spelta 7839 322. |
LR45
| Note | Derived from Secale cereale . 2A = T2AS-2R# |
| Chromosome | 3S |
LR46
| Note | Completely linked with Yr29 0119. Adult plant resistance. |
| Chromosome | 1B |
| Chromosome | 1BL |
| Sources / synonyms | Lalbahadur(Pavon 1B) Lr1 1364; Lalbahadur(Parula 1B) 10281. |
| Varieties | Attila 10281; Kundan 11248; Siete Cerros 10817. |
| Varieties (alt.) | CI 13227 Lr3c ; Frontana Lr13 Lr14b Lr34 Lr68 10817; Pavon F76 Lr1 Lr10 Lr13 {1364, 119}; Parula Lr13 Lr34 10281; Parula Lr3b Lr13 Lr14b Lr34 Lr68 10817; Quaiu 3 Lr42 10943; Saar Lr34 10481. |
| Type varieties | Present in the following tetraploid wheats in combination with other genes/QTL: Bairds 11600; Dunkler {M23032}; Heller#1 {M23032}. |
| Marker associations | An RFLP marker associated with Lr46 with a recombination value of about 10% was identified in0119; Xwmc44-1B – 1.4 cM – Xbac24prot – 9.5 cM – Lr46 – 2.9 cM – Xbac17R.......Xgwm140-1B 10281; Xwmc44-1B – 3.6 cM – Lr46 2.1 cM – XtG818/Xbac17R......Xgwm140-1B 10281; XSTS1BL2 – 2.2 cM – Lr46/XSTS1BL9 – 2.2 cM – XSTS1BL17 10326. Associated with Ltn2 and Yr29 . |
LR47
| Note | Derived from Ae. speltoides 9901. 7AS = Ti7AS-7S#1S- |
| Chromosome | 7AS |
| Chromosome | 7AL |
| Varieties | Bionta 2004 10737. Pavon derivative PI 603918 9901. Backsross derivatives based on Express, Kern, RS15, Yecora Rojo and UC1041 {0126, 11721}. Recombinants with reduced 7S#1 segments 11721. |
| c | Lr47 was identified as a CNL, which was also present Ae. speltoides accessions T2140002, Y162 and Y397 11721. |
7A = T7AS-7S#1S.7S#1L
389.
LR48
| Note | Adult plant resistance 0085. Recessive 0085. |
| Chromosome | 2BS |
| Chromosome | 4BS |
| i | CSP44 / 5*Lal Bahadur AUS91421 0329. |
| Varieties (alt.) | CSP44 Lr34 0085; Dove Lr34 0329. |
| Marker associations | Xgwm429b-2B – 6.1 cM – Lr48 – 7.3 cM – Xbarc7-2B 329; RAPD markers flanking Lr48 at 2.7 and 8.6 cM are reported in 10738; Xwmc175-2B – 10.3 cM – Lr48 – 2.5 cM – Xwmc332-2B 10842; Centromere – 27.5 cM – Lr48 (est.) 10842; Xgwm429b-2B – 4.2 cM – Sun563/Sun497 – 0.6 cM – IWB31002/IWB39834/IWB3432/IWB72894/Lr48 – 0.3 cM – IWB70147 – 2.0 cM – Xbarc67-2B 11112; Xsun563/Xsun497 – 0.6 cM – 5 SNP markers/ Lr48 – 0.3 cM – IWB70147 – 2.0 cM – XBARC0-7-2B – 9.4 cM – Lr13 11172. |
Lr48 is closely linked with
Lr25 10738. Based on haplotype analysis
Lr48 was postulated in 13 Australian Condor relatives
11112. The suggestion that this gene is present in 13 Australian varieties carrying
Lr48 markers and hence
Lr48 11172 needs verification.
LR49
| Note | Adult plant resistance 0085. |
| Chromosome | 2AS |
| Chromosome | 4BL |
| i | VL404 / 5*Lal Bahadur Lr34 0329. |
| Varieties (alt.) | Tonichi Lr34 0329; VL404 Lr34 0085. |
| Marker associations | Xbarc163-4B – 8.1 cM – Lr49 – 10.1 cM – Xwmc349-4B 0329; Xgwm251-4B – 8.6 cM – XsunKASP21 – 0.4 cM – Lr49 – 0.6 cM – XsunKASP24 – 8.1 cM – Xwmc349-4B 11484. |
LR50
| Note | Based on linkage with SSR markers. |
| Chromosome | 2BL |
| Varieties | KS96WGRC36 = TAM[*] 3/TA870 0221; U2657 = Karl 92*4/TA674 0221; U3067 = TAM107*4/TA874 0221; U3193 = TAM107*4/TA874 0221. |
| Type varieties | T. armeniacum TA870 0221; T. armeniacum TA145; TA874 0221; TA870 0221; TA895 0221. |
| Marker associations | Linked with Xgwm382-2B (6.7 cM) and Xgdm87-2B (9.4 cM) 0221. |
LR51
| Chromosome | 1BL |
| i | Express[*] 7/T1 0308; Koln[*] 7/T1 308; UC1037[*] 7/T2 0308. |
| Varieties | Neepawa[*] 6/ Ae. speltoides F-7, selections 3 and 12 306; Interstitial translocations T1AS.1AL-1S#F712L-1AL 0308 = T1; T1BS.1BL-1S#F7L-1BL 0306. |
| al | Ae. speltoides F-7 selections 3 and 12 0306. |
| Marker associations | Linked with RFLP markers Xmwg710-1B and Xaga7-1B 0308; A CAPS marker was developed from XAga7-1B 0308. |
LR52
| Synonym | LrW 309 |
| Chromosome | 5BS |
| Chromosome bin | 5BS6-0.81-1.00. |
| Varieties | AUS28183 = V336 10679; AUS18187 10679; Tc-LrW = RL6107 10035. |
| Varieties (alt.) | V618 Lr33 309; V336 Lr33 LrB 309. |
Xgwm234-5B – 10.2 cM –
Lr52 – 3.3 cM –
Yr47 – 9.6 cM –
Xcfb309-5B 10679;
Xcfb309-5B –
Xsun480/Xmag705/Xfcp552-5B – 0.4 cM –
Yr47 – 4.3 cM –
icg16c008/Xgwm234-5B 11200;
Xsun180 – 0.4 cM –
Lr52 – 0.2 cM –
Yr47 – 1.4 cM –
Xgwm234-5B 11200.
LR53
6BS
10203; According to
11778 Lr53 originated from
Ae. longissima or
Ae. sharonensis ; 6[S] S.6[S] L-6BL
117787.
LR54
| Note | Derived from Ae. kotschyi . |
| Chromosome | 2DL |
| Varieties | Line S14 10139. |
| ad | Line 8078 10139. |
| al | Ae. kotschyi 617 10139. |
LR55
| Note | Derived from Elymus trachycaulis 10180. 1B ( |
| Chromosome | 1BL |
| Chromosome | 1H |
| Varieties | KS04WGRC45 = Heyne*3/TA5586. |
LR56
6A (6AL-6S[sh] L.6S[sh] S)
10224.
LR57
| Note | Derived from Ae. geniculata . 5DS ( |
| Chromosome | 5DL |
LR58
| Note | Derived from Ae. triuncialis = T |
| Chromosome | 2BS |
2BL-2[t] L(0.95). 2BL
10375.
LR59
| Note | Derived from Ae. triuncialis . 1A, probably 1AS alien centric fusion 10399. |
| Varieties | Line 0306 10399 = Ae. peregrina -680/2*CS//5*W84-17 10399. |
| al | Ae. peregrina (UUSS, 2n=28) 680 10399. |
Problems in recovering balanced recombinants are reported in
10762. Further study of this translocation (Lr59-Full) identified a 1AS.1L[P] -6S[P] -6BS structure. Another round of recombination identified the following types: 1AS.1L[P] -1AL; 1AS.1L[P] -6S[P] -6BS; and 1AS.1AL-1L[P] -6S[P] - 6BS (Line Lr59-151 had the shortest alien segment). Recombinants with 6BS retained the wheat
GLI-B2 locus
11499.
LR60
| Synonym | LrW2 0305 |
| Chromosome | 1DS |
| Varieties | RL6172 0305 = Thatcher*3/V860. |
| Marker associations | Lr60 – 8.4 cM – Xbarc149-1D/Lr21 10400; Lr60 – 13 cM – Lr21 10400. |
LR61
| Synonym | LrAW2 11223 |
| Chromosome | 6BS |
| Type varieties | AUS 26579 11224; AUS 26582 11224; Guayacan 2 10485; Guayacan INIA 10485; PI 244061 11280. |
| Marker associations | Lr61 – 2.2 cM – P81/M70 269/P87/M75131 – 4.6 cM – P87/M76 149 – 21.7 cM – Xwmc487-6B 10485; sun682 – 0.7 cM – Lr61/sun683/sun684 – 0.2 cM – sunKASP60 11223; sun682 – 0.6 cM – Lr61/sun684 – 0.6 cm – sunKASP59 11223. |
The designation LrAW2 was also used for Lr82 .
LR62
| Note | Derived from Ae. neglecta 6A = 6AL-6[Aen] L.6[Aen] S 10537. |
| Varieties | Line 03M119-71A 10537. |
| al | Ae. neglecta 155 10537. Associated with Yr42 10537. |
LR63
| Note | Derived from T. monococcum |
| Chromosome | 3AS |
| i | RL6137 = Thatcher*6/TMR5-J14-12-24 {10646, 10875}. |
| Varieties | TMR5-J14-12-2410646. |
| dv | T. monococcum 10646. |
| Marker associations | Xbarc321/Xbarc573A – 2.9 cM – Lr63 10875. |
LR64
| Chromosome | 6AL |
| i | RL 6149 = Thatcher*6/ T. dicoccoides 8404 LrX 10550. |
| Varieties | Tc/RL6149-RIL13, GSTR 451{11399, 11498}. |
| Type varieties | T. dicoccoides 8404 10550. |
| Marker associations | Xbarc104-6A – 13.9 cM – Lr64 – 21.9 cM – Xgwm427-6A 10550; K-IWB38521 – 1.0 cM – Lr64/K-IWB59855 – 2.9 cM – K-IWB72197 – 10 cM – K-IWB73609 11399. The second recessive gene ( LrX ) in RL6149 was located in chromosome 1DS: K-IWB577 – 11.2 cM – LrX/IWB38437 11399. |
LR65
| Synonym | LrAlt 10739 |
| Chromosome | 2AS |
| Varieties | Selection ARK 0; 10848. |
| Varieties (alt.) | T. spelta Altgold Rotkorn Lr71 {10739, 10848}. |
| Marker associations | Lr65 – 1.8 cM – Xbarc212-2A/Xwmc382-2A – 2 cM – Xgwm636 10739; XE41M57-165 – 3 cM – Lr65 – 2 cM – Xbarc124/Xbarc222/Xgwm614-2A 10848; LR65 – 0.5 cM – Alt-64 – 0.05 cM – Alt-21 – 1.7 cM – Xbarc212-2A 11536; AltID-11 – 0.7 cM – Lr65 – 0.02 cM – Alt-64 – 1.1 cM – Alt21 11536. TraesCS2A02G001500 was predicted as the candidate position for LR65 11536. LR65 was estimated to be about 10 cM from LR17 10848. Some plants of Altgold Rotkorn possess Lr71 conferring IT 12C 10848. |
LR66
| Note | LrS13 10592. |
| Chromosome | 3A |
3A = 3A-3S[S] .
LR67
| Note | Adult plant resistance. |
| Chromosome | 4DL |
| Chromosome bin | C-0.53 10675; Distal to 0.56 10678. |
| i | RL6077 = Thatcher*6/PI 250413 10675. |
| Varieties | Chapingo 48 11070; PI 250413 10676; Yaqui 53 11070. v2 NP876 Lr46 11441; Sujata Lr46 {11440, 11442}. |
| Marker associations | Xcfd71-4D – 1.5 cM – Lr67 10675; Pleiotrophic with Yr46 ; Close linkage with Xcfd71-4D and Xbarc98-4D estimated at 4.4 cM, and Xcfd23-4D at 5.2 cM (all on the same side of Lr67/Yr46 10678; Xgwm165-4D/Xgwm192-4D – 0.4 cM – Yr46/Lr67 10678. |
| c | This multiple disease resistance locus was identified as a hexose transporter most similar to the STP13 family and containing 12 predicted transmembrane helices 11070; GenBank: coding sequence KR604817.2, 1,545 bp; protein sequence ALL26331.2, 514 amino acids. Lr67 was predicted in 51 accessions mainly collected in the Indian subcontinent 11448 using the gene-specific marker SNP1-TM4 11070. Lr67 is pleiotropic or closely linked with Sr55 , Yr46 , Pm46 and Ltn3 . |
LR68
| Note | Adult plant resistance. |
| Chromosome | 7BL |
| Varieties | Arula 1 CIMMYT GID 1847450 10817; Arula 2 CIMMYT GID 1847422 10817. |
| Varieties (alt.) | Arula 1 Lr14b CIMMYT GID 1847450 10817; Arula 2 Lr14b CIMMYT GID 1847422 10817; Frontana Lr13 Lr14b Lr34 Lr46 10817; Parula Lr3b Lr13 Lr14b Lr34 Lr46 10817; Rayon F89 Lr14b 10817; Sujata Lr46 Lr67 11442; Weebill Lr14b 10817. |
| Marker associations | Close linkage with several markers in chromosome arm 7BL and Lr14b in the Apav x |
Arula population. Flanking markers are
Xpsy1-1 and
Xgwm146-7BL at 0.4 and 0.6 cM. Gammairradiation induced deletion stocks of Arula 1 that lack
LrP but have
Lr14b were identified showing that the two genes are located at different closely linked loci
10817;
Xwmc232-2B – 0.2 cM
– Xcfa2257-2B – 1.1 cM
– Cs7BLNLRR
– 0.3 cM
– Psy1-1 – 0.5 cM
– Lr68 – 0.6 cM
– Xgwm146-2B 10817; Gamma-irradiation induced deletion stocks of Arula 1 lacked
Lr68 but had
Lr14b showing that the two genes are located at different closely linked loci
10817.
LR69
| Chromosome | 3DL |
| Varieties | Toropi-6.3 10903. |
LR70
| Chromosome | 5DS |
| Varieties | Yet to be named selection of cross or backcross to Tc 10904. |
| Varieties (alt.) | KU3198 Lrk1 10904. |
| Marker associations | Lr70 – 5.6 cM – Xbarc130-5D – 1.7 cM – Xwmc233-5D 10904. Lrk1 is possibly Lr52 10904. |
LR71
1B centromere region not resolved
10911.
LR72
| Chromosome | 7BS |
| Type varieties | Altar C84 GID 30374 10947; Atil C2000 GID 6719128. |
| tv2 | Storlom Lr3a 10947; Llareta INIA Lr14a 10947; Jupare Lr27 + Lr31 10947. |
| Marker associations | Lr72 – 5.5 cM – Xwmc606-7B 10947. |
LR73
| Chromosome | 2BS |
| Varieties | Morocco 10969; Several Australian cultivars 10969. |
| Varieties (alt.) | Federation LR10 10969; |
| Marker associations | wPt8760 – 4 cM – Lr73 – 1.4 cM – wPt8235 10969. |
LR74
| Note | Adult plant resistance |
| Chromosome | 3BS |
| Chromosome bin | 3BS8-0.78-0.87. |
| Varieties | AGG91583WHEA=BTSchomburgk Selection 11031; Spark 11031. |
| Marker associations | Xcfb5006-3B – 1.9 cM – Lr74 – 2.2 cM – BS00009992 – 2.7 cM – Xgwm533-3B 11031. |
Tc*3 / Caldwell population: a gene for adult plant resistance derived from Caldwell was identified with closest marker
Xcfb5006-3B ; the Tc*2 / Caldwell 24-1 parent shared the same T allele at KASP marker
IWB44132 as Spark and BT-Schomburgk Selection
11281.
LR75
| Note | Adult plant resistance. |
| Synonym | Qlr.sfr-1BS 10066 |
| Chromosome | 1BS |
| Chromosome bin | 1BS10-0.51.00. |
| Varieties | ArinaLr75, Arina*2//Forno/Arina#F7NIL85 11053; C14.20 11053. |
| Varieties (alt.) | Forno Lr14a Lr34 11053. |
| Marker associations | Xgwm604-1B 1.6 – cM – Lr75 – 2.70 cM – swm271 – 0.14 cM – Xgwm11-1B/Xgwm181B/swm294/swm278/swm275 11053. |
LR76
| Note | Derived from Ae. umbellulata . |
| Synonym | LrUmb 11055 |
| Chromosome | 5DS |
| Varieties | IL 393-4 11055; T. durum cv. WH890/ Ae. umbellulata Pau 3732 // CS Ph[I] /3/2*WL711, C14.21 11055. |
| al | Ae. umbellulata Pau 3732 11055. |
| Marker associations | Lr76 – 7.6 cM – Xgwm190-5D 11055. Lr76 behaves as an allele of Lr57 derived from Ae. geniculata . The low infection types are also different. A co-segregating 450 bp Lr57-Yr40 -CAPS16 marker was present in IL 393-4, but not in many Australian wheat cultivars 11055. The introgression carrying the Ae. umbellulata segment replacing terminal Chr. 5DS was 9.47 Mb with the break point between TraesCS5D02G1600 and TraesCS5G02G20010 11552. Independent mutations indicated that Lr76 and Yr70 were different genes 11552. |
LR77
| Note | Adult plant resistance. |
| Chromosome | 3BL |
| Varieties | Tc*2 / Santa Fe 8-1C.9 11164; Tc*2 / Toropi GSTR 449 11164 |
| Varieties (alt.) | Duster Lr3a Lr11 Lr34 PI 639233 11164; Santa Fe Lr3a Lr37 PI 641772 11164. |
| Marker associations | IWB2531 – 3.5 cM – IWB32805 – 3.5 cM – Lr77/IWB10344 – 0.9 cM – IWB73555 – 5.3 cM – IWB12260 11164. |
LR78
| Note | Adult plant resistance. |
| Synonym | QLr.cdl.5D 11212 |
| Chromosome | 5DS |
| Chromosome bin | According to 10125 Xbarc130 is in bin 5DS2-0.78-1.00 and Xcfd189 is in bin 5DS1-C-0.63. |
| Varieties | Tc *2 / Santa Fe GSTR 450 11498. Tc*3 / Toropi 4A212A 11212. |
| Varieties (alt.) | Toropi PI 344200 11212. |
| Marker associations | Xcfd1895D – 13.2 cM – IWA2689 – 2.2 cM – Lr78 – 8.0 cM – Xcfa2104-5D 11212. }. |
A second selection Tc*2 / 3A12A crossed with Tc segregated for multiple QTL in chromosome arms 1BL (possibly
LR46 ), 3BS and 4BS
11212.
LR79
| Synonym | LrAW3 11224 |
| Chromosome | 3BL |
| Chromosome bin | 3BL-0.63-0.90. |
| Type varieties | 242/Bansi#149, C18.15 11224. |
| tv2 | AUS26582 Lr61 {11223, 11224}. |
| Marker associations | KASP31457 – 8.1 cM – sun770 – 2.9 cM – Lr79 – 1.8 cM – sun786_ 11224. |
Lr79 conferred resistance to Australian common wheat
Pt races, but not to durum-specific Ethiopian and Californian races
11224.
LR80
| Synonym | LrH2 11464 |
| Chromosome | 2DS |
| Varieties | Hango-2, FLW6-Selection AGG95499WHEA 11464. |
| Marker associations | Xgdm35-2D – 7.5 cM – Xcau96-2D – 0.4 cM – Lr80 – 0.2 cM – Xbarc124-2D – 13.2 cM – Xgwm296-2D 11464. Xcau96-2D – 4.0 cM – KASP17425 – 0.2 cM – Lr80 – 0.4 cM – KASP17148 – 1.0 cM – Xbarc124-2D 11464. |
LR81
| Note | Lr470121 11583. |
| Chromosome | 2AS |
| Chromosome bin | 2AS-0.78-1.00. |
| Varieties | RIL 92 PI 700925 11583. |
| Varieties (alt.) | PI 470121 Lr34 11583. |
| Marker associations | Xwmc827-2A – 9.4 cM – Xstars-KASP320 – 0.5 cM – LR81 – 0.2 cM – Xstars-KASP323 – 5.3 cM – Xwmc296-2A 11583. |
LR82
| Note | LrAW2 11586. Recessive. |
| Chromosome | 2BL |
| Varieties | Aus27352 11586. |
| Marker associations | KASP22131 – 0.8 cM – Lr82 – 1.2 cM – KASP11333 11586. The designation LrAW2 was also used for Lr61 . |
LR83
| Note | LrX 11399. Recessive. |
| Chromosome | 1DS |
| Varieties | PI 701502 11638. |
| Varieties (alt.) | RL6149 Lr60 {11399; 11638}. |
| Marker associations | K-IWB38437 – 1 cM – LR83 – 8.6 cM – 1D9037237 – 4.7 cM – K-IWB577 11638. LR83/IWB38437 – 11.2 cM – K-IWB577 11399. Locus order: LR83 – LR60 – LR42 – LR21_ 11638. |
LR84 . TRITD6Bv1G225630 (Svevo).
| Note | QLr.cim-6BL ) 11600; QLr.hzau-6BL 11640; TtRPM1-630 11640. Adult plant resistance. |
| Chromosome | 6BL |
| Type varieties | Atred#2+6BL 11640; Atred#2 / Bairds RIL 397 GID 7013103 {11600, 11640}. |
| tv2 | Bairds {M11600, 11640}; Dunkler {11639, 11640}; Heller#1 {11639, 11640}; Planeta 11640. |
| Marker associations | IWB8763 – LRXX – IWB10767 (0.9 cM. 131.6 Kb) 11640. |
| c | NBL-LRR structure annotated as an RPM1 -like gene 11640. |
LR85
| Note | 6B (6B-6S[sh] ) {11683, 11684, 11712}. |
| Varieties | Line 6B-RY-32-3-14 11683 = Line 42 11684 = D42 11712 = Genebank accession number to be advised . |
| al | Ae. longissima AEG-67822 11712; Ae. sharonensis AEG-548-4 {11683; 11712}. |
| c | The same NLR gene with a distinctive coiled-coil (CC) domain was cloned from each alien diploid accession 11712. Development of lines with shortened 6S[sh] segments is described in 11684. All 16 EMS-induced mutants in Line D42 were susceptible to both leaf rust and stripe rust 11712. |
| Note | Adult plant resistance. |
| Chromosome | 5DS |
| Varieties | Ae. caudata derivative PAU16060 11613. |
| al | Ae. caudata PAU3556 11613. |
| Chromosome | 7BL |
| Chromosome bin | 7BL-10. |
| Varieties | Bimai 16 11042. |
| Marker associations | Zcfa2257-7B – 2.8 cM – LrBi16 – 2.6 cM – Xgwm344-7B 11042; Xcfa2257-7B – 2.8 cM – LrBi16 – 2.5 cM – Xgwm344-7B 11082; A closer AFLP marker could not be converted to a STS/SCAR marker11082. Bimai 16 also carries Lr26 and LrZH84 11042. Allelic with Lr14c , but showed different reaction patterns compared to lines with Lr14c and LrFun 11082. |
| Chromosome | 7BL |
| Chromosome bin | 7BL-10. |
| Varieties | Fundulea 90 11038. |
| Marker associations | Xgwm344-7B – 4.4 cM – LrFun – 5.7 cM – Xwmc70-7B 11038. |
| Chromosome | 2BL |
| Varieties (alt.) | Sinvalocho MA Lr3 LrSV1 LrSV2 10929. |
| Marker associations | Xbarc-2B – 0.6 cM – Xgwm382-2B – 0.6 cM – LrGam6 – 17.9 cM – Xgwm528-2B 10929. |
| Chromosome | 5BS |
| Varieties (alt.) | Ku3198 Lr70 10904. |
| Marker associations | LrK1 – 0.6 cM – Xcfd20/Xgwm234-5B 10904. LrK1 could be Lr52 or an allele 10904. |
| Varieties | Thatcher 10233. |
| Varieties (alt.) | Kanred LrKr2 10233. |
| Varieties (alt.) | Kanred LrKr1 10233. |
| Chromosome | 2BL |
| Varieties | Neijiang 977671 11043. |
| Marker associations | Xwmc317-2B – 4.2 cM – LrNJ97 – 2.2 cM – Xbarc159-2B – 2.3 cM – Xwmc356-2B 11043. |
| Chromosome | 5DS |
| Varieties | Ae. peregrina derivative PAU16058 11614. |
| al | Ae. peregrina PAU3519 11614. |
| Chromosome | 2BS |
| Type varieties | PI 244061 11280. ma : LrPI144061 – 11.5 cM – KASP2BSIWB6117 11280. This gene might be Lr13 11280. |
| Chromosome | 6BL |
| Type varieties | PI 287263 11280. ma : LrPI287263 – 2.8 cM – KASP6BLIWB44753 – 2.8 cM – Xdupw217 11280. |
| Chromosome | 6BS |
| Type varieties | PI 209274 11280. |
| Marker associations | KASP6BSIWB39456 – 3.7 cM – LrPI209274 – 1.0 cM – KASP6BSIWB6117 – 8.1 cM – Xdupw217-2B 11280. This gene may be Lr53 11280. |
| Note | Adult plant resistance. |
| Chromosome | 2DS |
| Varieties (alt.) | Sinvalocho MA Lr3 LrGam6 LrSV2 10929. |
| Marker associations | Xgwm296-2D – 1.4 cM – LrSV1 – 7.1 cM – Xgwm261-2D 10929. |
| Note | Adult plant resistance. |
| Chromosome | 3BS |
| Varieties (alt.) | Sinvalocho MA Lr3 LrGam6 LrSV1 10929. |
| Marker associations | Xgwm389-3B – 3.0 cM – LrSV2/Xgwm533-3B – 4.2 cM – Xgwm49-3B 10929. |
According to
11334 LrSV2 acted in a complementary way with
Lrc- SV2 on chromosome 4BL. These complementary genes were closely linked to the locations of
Lr27 and
Lr31 but were considered to be different genes.
| Note | Adult plant resistance 820. |
| Varieties (alt.) | AC Taber Lr13 Lr14a 820. |
| dv | T. monococcum . |
| Marker associations | Linked to microsatellite locus Xgwm136 277. |
| Varieties | Ae. triuncialis derivatives 227. |
| ad | WL711 BC2F5 addition lines 227. |
| al | Ae. triuncalis Acc. 3549 227. |
| Marker associations | Lines with LtTr possessed a homologue of Xgwm368-4B 227. |
| Note | Reccessive 10031. |
| Synonym | lrTt1 10031 |
| Chromosome | 2A |
| Varieties | Line 842 = Saratovskaya*2/ T. timopheevii spp. viticulosum 10031. |
| Marker associations | Xgwm812-2A – 1.5 cM – LrTt1 10031. |
A gene, identified only as
Lr , was transferred to wheat chromosome 2AS from 6M[v]
113: cosegregating markers were
Xpsr933-2A and
Xpsr150-2A . GERMPLASM
| Chromosome | 5B |
| Type varieties | Wollaroi AUS99174 10747. |
| Marker associations | Xgwm234-5B – 7.2 cM – LrWo – 20.3 cM – wPT-1420 10747. |
The relationship of LrWo to Lr52 was not established.
| Chromosome | 1BL |
| Varieties | Guizhou 98-18 11042; Tian 95HF2; Xinong 1183-4 11042; Zhoumai 11 10682. |
| Varieties (alt.) | Predgornaia 2 Lr26 10581; Zhou 8425B Lr26 10581. |
| Marker associations | Xbarc8-1B (cent) – 5.2 cM – LrZh84 – 3.9 cM – Xgwm582-1B 10581. |
A series of temporary designations for seedling and adult plant resistance genes in six durums is given in
1648.
A potentially novel resistance gene was located in chromosome 5BS of Iranian landrace PI 289824.
Xgwm234-5B – 8.9 cM
– Lr – 2.3 cM
– STS
Xtxw 200
10253.
Complex genotypes AC Domain:
Lr10 Lr16 Lr34 820. AC Splendor:
Lr1 Lr16 Lr34 10179 AC Teal:
Lr1 Lr13 Lr16 821 Alsen:
Lr2a Lr19 Lr13 Lr23 Lr34 10152 Alsen:
Lr2a Lr10 Lr13 Lr23 Lr34 10223. Benito:
Lr1 Lr2a Lr12 Lr13 1256. Buck Manantial:
Lr3 Lr13 Lr16 Lr17 Lr34? 300. Carberry:
Lr21 Lr16 Lr23 Lr34 Lr46 11567. Coker 9663:
Lr9 Lr10 Lr14a 10742. Duster:
Lr34 Lr46 Lr77 11369.
Estanzuela Benteveo:
Lr13 Lr26 Lr34 10980. Estanzuela Pelon:
Lr1 Lr17a Lr26 Lr34 10980. Estanzuela Tarariras:
Lr3bg Lr13 Lr34 10980. Era:
Lr10 Lr13 Lr34 342. Grandin:
Lr2a Lr3 Lr10 Lr13 Lr34 821. INIA Boyero:
Lr13 Lr26 Lr34 10980. INIA Churrinche:
Lr10 Lr24 10980. INIA Tero:
Lr17a Lr24 10980. Mango:
Lr1 Lr13 Lr26 Lr34 1374. MN7529:
Lr1 Lr2a Lr10 Lr16 976. Norm:
Lr1 Lr10 Lr13 Lr16 Lr23 Lr34 {10152, 10223} Opata 85:
Lr10 Lr27+Lr31 Lr34 1058. Pasqua:
Lr11 Lr13 Lr14b Lr30 Lr34 304. Pioneer 26R61:
Lr13 Lr14b Lr26 10742. Prospect:
Lr1 Lr2a Lr10 Lr13 197. Roblin:
Lr1 Lr10 Lr13 Lr34 303,
713. Trap:
Lr1 Lr3 Lr10 Lr13 Lr34 1374. Genotype lists: Australian cultivars
0288; Chinese cultivars {0013, 10682, 11310}; Combinations with
Lr34 1361; Cultivars from the former USSR
1380; Czechoslovakian/Czech cultivars
855,
0102,
11717; European cultivars {0229, 0260, 0288, 0337,10345, 10794}; Indian cultivars {1365, 1345}; Indian Subcontinent
1365; Mexican cultivars
1373; U.S.A. cultivars
1219,
978,
0334,
10111,
10146,
10152, French cultivars
10792, Croatian cultivars
11135. Kazakhstan cultivars
11161, see also
970. See
11178 for review and analysis of leaf rust resistance genes in six durum wheats.
SULR23
| Note | Suppressing allele. |
| Chromosome | 2DS |
| Varieties | Altar 84/ Ae. tauschii 219 1058. |
| Note | Non-suppressing allele. |
| Varieties | Opata 85 1058. See also evidence for specific suppression in 948. |
| Chromosome | 1BL |
| Chromosome bin | 1BL6-0.32 10743. |
| Marker associations | Proximal to Xgwm264.1-1BL 10743. Associated with lm producing a lesion mimic phenotype in the absence of disease 10743. |
| Chromosome | 1BS |
| Varieties | Forno/ T. spelta cv. Oberkulmer mapping population; the resistance was contributed by Forno 0050. |
| Marker associations | Associated with Xpsr949-1B and Xgwm18-1B 0050. |
| Chromosome | 2B |
| Varieties | Forno/ T. spelta cv. Oberkulmer mapping population; the resistance was contributed by Oberkulmer 0050. |
| Marker associations | Associated with Xpsr924-2B and Xglk699-2B 0050. |
| Chromosome | 3A |
| Varieties | Forno/ T. spelta cv. Oberkulmer mapping population; the resistance was contributed by Forno0050. |
| Marker associations | Associated with Xpsr570-3A and Xpsr543-3A 0050. |
| Chromosome | 4B |
| Varieties | Forno/ T. spelta cv. Oberkulmer mapping population; the resistance was contributed by Forno 0050. |
| Marker associations | Associated with Xpsr921-4B and Xpsr593-4B 0050. |
| Chromosome | 4DL |
| Varieties | Forno/ T. spelta cv. Oberkulmer mapping population; the resistance was contributed by Forno 0050. |
| Marker associations | Associated with Xglk302-4D and Xpsr1101-4D 0050. |
| Chromosome | 5DL |
| Varieties | Forno/ T. spelta cv. Oberkulmer mapping population; the resistance was contributed by Oberkulmer 0050. |
| Marker associations | Associated with Xpsr906-5D and Xpsr580-5D 0050. |
| Chromosome | 7B |
| Varieties | Forno/ T. spelta cv. Oberkulmer mapping population; the resistance was contributed by Forno 0050. |
| Marker associations | Associated with Xpsr593-7B and Xpsr129-7B 0050. |
| Varieties | Forno/ T. spelta cv. Oberkulmer mapping population; the resistance was contributed by Forno 0050. |
| Marker associations | Associated with Xglk750-7B and Xmwg710-7B 0050. |
AGS 2038 (R) / UG111729 (MR) : RIL population. Seedling and adult plant resistance was controlled by several QTL, the most important of which was designated
QLr.ags-1AL spanned by
IWB20487 and
IWA4022 11507.
Avocet S / Attila: At least two additive genes for slow rusting
10586. In addition to
Lr46 there were small effects on chromosomes 2BS, 2BL and 7BL
10586.
Avocet R (S) / Chilero: Lr46/Yr29 and
QLr.cim-5DS/QYr.cim-5DS , from Chilero, and
QLR.cim1DL/QYr.cim-1DL from Avocet R
11306.
Avocet / Kundan: RIL population:
Lr29 (flanked by
10902272 and
02414 , R[2] = 0.5 -0.65),
QLR.cim2BL flanked by
1237388 and
108178035C>T
from Avocet and QLr.cim-2DS
flanked by 1237388
and 1081780
35C>T from Kundan
11248.
Avocet / Pastor: RIL population: QTLs mapped on 1BL (
Lr46 , 2BS, 5A, 6B and 7BL plus minor QTLs on 1B, 2A and 2D
10928.
Avocet S / Pavon 76: QTL identified included: 1BL (
PstAFAMseCAC1&2 ), 4BL (
Xgwm368 ), 6AL (
Xgwm617 ), 6BL (
PstAGGMseCGA1 )
10443.
Beaver / Soissons : DH population: QTL for resistance to Australian pathotypes were located on 4-6 chromosomes over 3 years; the most consistent being 1B(1BL.1RS), 4BS (proximal to
Xbarc20-4B ) and 5AS (
QTLBvr5AS , proximal to
Xbarc10-5A ) and in the vicinity of
wPt-8756 and
wPt-1931 10687.
Capo (R) / Arina (S) and Capo (R) / Furore (S): Four QTL on chr. 2AL, 2BL, 2BS and 3BS, were from Capo and one on 5BLwas from Arina; the QTL on 2AL, 2BL and 3BS were co-located with QTL for resistance to stripe rust
11449.
CI 13227 (R) / Lakin (MS): DH population: Adult plant resistance conferred by
QLR.hwwg-2DS (R[2] = 0.11 – 0.26),
QLr,hwwg-7BL (R[2] = 0.08-0.19, likely
Lr68 ), and
QLr.hwwg-7AL from CI 13227, and
QLr.hwwg-3BS from Lakin
11311.
CI 13227 (R) / Suwon (S): SSD population
10211. Two QTLs for slow leaf rusting, located on chromosomes 2B and 7BL, were mapped for final severity, area under disease progress curve, and infection rate in a
QLr.osu-2B was associated with microsatellite markers
Xbarc18-2B and
Xbarc167-2B (R[2] = 9-18%).
QLr.osu-7BL was associated with microsatellite marker
Xbarc182-7B (R[2] = 12-15%)
10211. CI 13227 constributed the resistant alleles for both QTLs.
QLrid.ocu-2D , linked to
Xgwm2612D , affected the duration of infection
10211. However, Thatcher backcross derivatives of CI 13227 appeared to have
Lr3c and
Lr46 11021.
Libellula / Huixianhong: RIL population: Six QTL on chromosome arms 1AS, 1AL, 1BL (
Lr34 ), 3AL, 4BL and 7DL were detected in a least two of seven environments, the most effective of which was identified as
Lr34 11757.
Mianyang351-15 (R) / Zhengzhou 5389 (R): RIL population: four QTL were located on chromosome arms 1BL (
Lr46 ), 2AS (
Yr37 ), 2DS, and 7BL (
Lr68 )
11545.
Ning7840 / Clark : RIL population:
QLr.hwwg-5AS from Ning 7840;
QLr.hwwg-6AS from Clark, flanked by
barc23-6A and
IWA3321 ;
Qlr.hwwg3BS.1 from Clark, flanked by
IWA4654 and
IWA1702 ; possibly
Lr74 ; and
QLr.hwwg-7DS/Lr34 from Ning 7840
11278.
TA 4152-60 (MR) / ND495 (MR): DH population: Five QTLs for APR were identified in the field, viz.
QLr.fcu-3AL (R[2] = 0.18),
QLr.fcu-3BL (R[2] = 0.19),
QLr.fcu-5BL (R = 0.07), and
QLr.fcu-6BL (R[2] = 0.12) from TA 4152-60 and
QLr.fcu-4DL (R[2] = 0.13) from ND495
10757. The 3AL gene also conferred seedling resistance to some races and the 3BL gene conferred resistance to race MFPS
10757.
Thatcher*3 / Americano 44d: RIL population: QTL for adult plant resistance identified on chromosomes 3AS (
QLr.cdl-3A ), 3DS (
QLr.cdl-3DS ) and 6DS (
QLr.cdl-6D ); both the 3AS and 3DS QTLs were required for expression of resistance
11296.
26R61 (S) / AGS 2000 (R): RIL population. A single QTL (
QLr.uga-2BS ) flanked by
wPt-666389 and
wPt-2600 on chromosome arm 2BS was designated
LrA2K 11507.
LrA2K – 2.9 cM –
Xwmc770-2B 11507.
Review of QTL in hexaploid wheat
11442.
Tetraploid wheat:
Atred#1 / Dunkler: RIL population: Four QTL for APR, including
Lr46 ,
QLr.cim-5BL and
QLR.cim6BL from Dunkler and
QLr.cim-2Bc from Atred#1
11639.
Atred#1 / Heller#1: RIL population: Four QTL for APR, including
Lr46 ,
QLr.cim-5BL and
QLR.cim6BL from Dunkler and
QLr.cim-2Bc from Atred#1
11639.
Bairds (R) / Atred#1: RIL population: Four QTL for APR, including
Lr46 ,
QLr.cim-5BL and
QLR.cim6BL from Bairds and
QLr.cim-2Bc from Atred#1
11600.
Colosseo / Lloyd: A major QTL,
QLr.ubo-7B.2 , for seedling and adult plant resistance from Colosseo, was located between
Xgwm344.2-7B and DART 378059,
3.23. Reaction to Pyrenophora tritici-repentis (anomorph: Drechlera tritici -repentis)⌂ Home
Disease: Tan spot, yellow leaf spot. Virulence in the pathogen is mediated by host-specific toxins and host resistance is characterized at least in part by insensitivity to those toxins. Three toxins, Ptr ToxA, Ptr ToxB and Ptr ToxC have been identified (see 10153). Toxin sensitivity determined by use of toxins extracted from pathogen strains and resistance determined by infection experiments are treated as different traits, although common genes may be involved. A review is provided in 10690. Introgressions of genes for insensitivity to Ptr ToxA and Ptr ToxB are outlined in 10153.
Batavia (S) / Ernie (R): DH population tested over three years. Four (1A(Ernie), 7A, 2BS, 3BS (Batavia)), five (2BS, 5BL(E), 3D, 6A, 7D(B)) and four (2BS, 5BL(E), 1A, 6A(B),) QTL accounted for most of the variation in each year. The greatest effect across years was the QTL on chromosome 2BS (R[2] =0.382, 0.298 and 0.362, respectively). This QTL was validated in four additional populations 10782.
Grandin (S) / BR34 (R) : RIL population: QTL in 1BS, QTs.fcu-1BS , (13-29% of variation depending on race) and 3BL, (13-41%) were involved in resistance to 4 races. Five other QTL showed race specific responses 10248.
TA4152-60 (R) / ND495 (S): DH population: Five QTLs for resistance, all from TA4152-60 10580, viz., QTs.fcu-2AS and QTs.fcu-5BL.1 conferring resistance to all races used, QTs.fcu-5AL conferring resistance to races 1, 2 and 5, QTs.fcu-5B.2 conferring resistance to races 1 and 2, and QTs.fcu-4AL conferring resistance to race 3.
WH542 (R) / HD29 (S): RIL population: SIM indicated QTL on chromosomes 1B, 3AS, 3BL, 5B and 6BS, but only two were confirmed by CIM, Qts.ksu-3AS flanked by Xbarc45-3A and Xbarc86-3A (LOD 5,4, R[2] = 0.23) and Qts.ksu-5BL (probably Tsn1 ) flanked by Xgwm499-5B and Xest.stsbe968-5B (LOD 6,5, R[2] = 0.27) 10552.
Wangshuibai / Ning 7840: RIL population: Race 1: QTs.ksu-1AS , R[2] =0.39 (nearest marker Xcfa2153-1A and QTs.ksu-2BS , R[2] =0.04) (nearest marker Xbarc2-2B 10753.
TSN1
| Note | Sensitive to Ptr ToxA. |
| Varieties | Bobwhite 10458; Cheyenne {10458, 0007}; Glenlea 10458; Grandin 10458; Hope {10458, 0007}; Jagger 0007; Katepwa 10458; ND2709 10458; ND495 0007; Sumai 3 10458; Timstein {10458, 0007}. |
| Varieties (alt.) | Kulm Tsc1 10458, 10030, 346; Trenton Tsc1 0315. |
| dv | Two Ae. speltoides accessions 10756. |
| Type varieties | Langdon 10458; Some T. dicoccoides accessions 10756. |
| Marker associations | Xbcd183-5B – 1.2 cM – Tsn1/Xbcd1030-5B – 2.4 cM – Xrz575-5B 10688. |
| c | Tsn1 has 8 exons and a S/TPK-NBS-LRR structure; all three domains are required for function and TSN1 protein does not interact directly with ToxA 10756. Tsn-ToxA interaction has a major role in SNB development in both common and durum wheat whereas it has a variable role in tanspot development in bread wheat and is not a significant factor for tanspot development in durum wheat 11204.. |
In Kulm/Erik, toxin response accounted for 24% of the variation in disease response, which was affected
by 4-5 genes
10030.
Ptr ToxA is functionally identical to
S. nodorum ToxA but has two predicted amino acid differences
10459. See Reaction to
Phaeosphaeria nodorum .
Australian cultivars with
tsn1 and
Tsn1 are listed in
10540.
TSN2
| Note | Conditions resistance to race 3 10344 |
| Chromosome | 3BL |
| sutv | LDN(DIC-3B) 10344. |
| Type varieties | T. turgidum no. 283, PI 352519 10344; T. dicoccoides Israel-A 10344. |
| Marker associations | Identified as a QTL in region Xgwm285-3B – Xwmc366.2-3B (R[2] =91%) 10344; Also classified as a single gene: Xgwm2853B – 2.1 cM – tsn2 – .2 cM – Xwmc366.2-3B 10344. |
TSC1
| Note | Sensitivity to Ptr ToxC 344. |
| Chromosome | 1AS |
| Varieties | 6B365 0315; Louise 11751; LMPG-6 11751; Opata 85 344. |
| Varieties (alt.) | Kulm Tsn1 0315; Trenton Tsn1 0315. |
| Marker associations | Gli-A1 – 5.7 cM – Tsc1 – 11.7 cM – XksuD14-1A 0315; Mapped to a 2.4 cM region spanning184 kb (CS RefSeq 2.1) in the Penawawa / PI626523 RIL population { 11751}. |
According to
10376 the same allele, presumably
tsc1 , conferred resistance to chlorosis induced by races 1 and 3 in cultivars Erik, Hadden, Red Chief, Glenlea and 86ISMN2137 in crosses with 6B-365.
| Note | Insensitivity is recessive. QTsc.ndsu-1A 9924. |
| Varieties | Chinese Spring 11751; Katepwa 315; Opata 85 344; Penawawa 11751; PI 62673 11751; Synthetic W-7984 315. |
TSC2
| Note | Sensitive to Ptr ToxB 10015. |
| Chromosome | 2BS |
| Chromosome bin | 2BS3-0.84-1.00. |
| Varieties | Aronde 11750; Katepwa 10871; Maris Dove 11750; Synthetic W-7984 10015; Thatcher 11750. |
| Type varieties | Altar 84 11750. |
| Note | Insensitivity allele 10015 |
| Varieties | Chinese Spring 11750; Lynx 11750. Opata 85; Salamouni 10871. |
| Type varieties | Altar 84 {10871; Langdon 11750. |
| Marker associations | Xmag681-2B/XTC339813 – 2.7 cM – Tsc/XBE444541 – 0.6 cM – XBE517745 10871; An XBE444541 EST-STS co-segregating marker for Tsc2 was developed and lines with tsc2 produced a 505 bp fragment whereas those with Tsc2 produced a 340 bp band 10871. Mapped to a 1.921 Mb region (23.106 – 25.027 Mb) 11750 |
| Note | Resistance is likely recessive 344 |
| Synonym | Tsc1 344 |
| Chromosome | 1AS |
| Varieties | Synthetic W7984 344. |
| Marker associations | Association with Gli-A1 0264, 0040, 344. QTsc.ndsu-1A , or a closely associated gene, confers insensitivity to Ptr ToxC, see 0315. Inoculation with purified toxin Ptr ToxC was used to map this locus. QTsc.ndsu-1A confers resistance in both seedlings and adult plants. |
| Chromosome | 4AL |
| Varieties | Opata 85/Synthetic W-7984 (ITMI) RI mapping population; resistance was contributed by W-7984 0090; In W-7976/Trenton resistance was contributed by W-7976 0264. |
| Marker associations | Association with Xksu916(Oxo2)-4A and Xksu915(14-3-3a)-4A 0090; In W-7976/Trenton there was association with Xwg622-4A 0264; Minor QTLs in chromosomes 1AL, 7DS, 5AL and 3BL were associated with resistance in adult plants 0264. |
QTL
'ITMI population': In addition to
tsc2 which accounted for 69% of the phenotypic variation in response to race 5, a QTL in chromosome 4AL (
Xksu916(Oxo)-4AS , W-7948) accounted for 20% of the phenotypic variation
10015.
Salamouni / Katepwa: RIL population: variation at the
Tsc2 locus explained 54% of the variation in response to race DW5
10871.
QTL analyses of durum crosses infected with various isolates of race 4 (lacking in Ptr Tox 1, 2 and 3) detected QTL on chromosomes 1A (2 QTL), 4B (3 QTL) and 5A (1 QTL)
11649.
| Synonym | tsn1 See: Insensitivity to tanspot toxin |
Resistance is recessive. 5BL.
TSR2
| Note | Resistance is recessive. Confers resistance to race 3 10344. |
| Synonym | tsn2 10344 |
| Chromosome | 3BL |
| sutv | LDN (DIC-3B) 10344. |
| Type varieties | T. dicoccoides Israel-A 10344. |
| tv2 | T. turgidum no. 283, PI 352519 Tsr5 10344. |
| Marker associations | Identified as a QTL in region Xgwm285-3B – Xwmc366.2-3B (R[2] = 91%) 10344; also classified as a single gene: Xgwm285-3B – 2.1 cM – tsr2 – 15.2 cM – Xwmc366.2-3B 10344. |
TSR3
| Synonym | tsn3 10394 |
| Chromosome | 3D |
| Chromosome | 3DS |
| Varieties | XX41 = [Langdon/ Ae. tauschii CI 00017] 10394; XX45 10394; XX110 10394. |
| dv | Ae. tauschii CI 00017 10394. |
| Marker associations | Xgwm2a – tsn3 , 15.3 cM, 14.4 cM and 9.5 cM in CS/XX41, CS/XX45 and CS/XX110, respectively 10419. Resistances in XX41 and XX110 were recessive whereas that in XX45 was dominant - all three were hemizygous-effective 10394. The genes were given different temporary designations {10394, 10419}, but all will be considered to have a common gene until they are shown to be different. |
TSR4
| Note | Resistance is recessive. Resistance to race 1 (culture ASC1a) 10350. |
| Synonym | tsn4 10350 |
| Chromosome | 3A |
| Varieties | Salamouni 10350. |
TSR5
| Synonym | tsn 10509 |
| Chromosome | 3BL |
| tv2 | T. turgidum no. 283, PI 352519 Tsr2 10509. |
| Marker associations | Tsr5 – 8.3 cM – Xgwm285-3B – 2.7 cM – Tsr2 10509. |
TSR6
| Note | Resistance is recessive. |
| Chromosome | 2BS |
| Varieties | ND-735 10668. |
| Marker associations | Xwmc382-2B – 15.3 cM – wPt-0289 – 4.6 cM – Tsr6 – 18.7 cM – Xwmc-2B 10668. According to 10668 Tsr6 should be identical to tsc2 (see Insensitivity to tan spot toxin (chlorosis)). |
TSR7
| Note | Dominant. QTs.zhl-3B 11362. |
| Chromosome | 3BL |
| Varieties | Br34 11363; Penawawa 11363. |
| sutv | Linked STARP markers were developed 11363. |
| Marker associations | Linked STARP markers were developed 11363. |
Tsr7 conferred resistance to race 1 (isolate Pti2), race 2 (isolate 86-124), race 3 (isolate 331-9), and race 5 (isolate DW5)
11362.
Temporary designations
| Note | Recessive |
| Chromosome | 3A |
| Varieties | Arina 10765; Heines VII 10765; Zenith 10765. |
| Chromosome | 3B |
| Varieties | Dashen 10590; HAR 604 10590; HAR 2562 10590. Effective against races ASC1a (race 1) and DW-16 10590. |
QTL
Louise / Penawawa: RIL population:
QTs.zhl-1A , located at interval 0-6.0 cM and likely
Tsc1 ;
QTs.zhl2D , located at 144.0-152.0 cM;
QTs.zhl-3B , located at 72.0-78.0; and
QTs.zhl-5A located at 154-160 cM
11362.
A QTL analysis of 4 durum crosses identified 12 QTL on chromosomes 1B, 2B (2), 3A (3), 5A (5) and 7A
11481.
3.24. Reaction to Rhizoctonia spp.⌂ Home
Cause of Rhizoctonia root rot.
ROT1
| Varieties | Scarlet-Rz1 10761. Scarlet-Rz1 was produced by mutagenesis 10761. |
3.25. Reaction to Sitobion avenae⌂ Home
English grain aphid.
SA1
| Synonym | RA-1 10877 |
| Chromosome | 6AL |
| Type varieties | C273 10877. |
| Marker associations | Xwmc179-6A – 3.37 cM – Sa1 – 4.73 cM – Xwmc580-6A 10877. |
3.26. Reaction to Sitodiplosis mosellana (Gehin)⌂ Home
Insect pest: Orange blossum wheat midge, Wheat midge. This pest should not be confused with Contarinia tritici , the yellow blossom wheat midge.
SM1
| Chromosome | 2B |
| Varieties | Augusta {218, 11137}; Blueboy 218; Caldwell 218; CDC Landmark 11579; Clark 218; FL302 218; Glencross 11044; Goodeye 11044; Howell 218; Knox 62 218; Mono 218; Paragon 11579; Robigus11137; Seneca 218; Skalmeje 11137. Unity 11579. |
| Marker associations | Linked to a SCAR marker223; Sm1 was mapped to a 2.5 cM interval on chromosome 2BS flanked proximally by AFLP-derived SCAR marker WM1 and distally by SSR Xgwm2102B { 10291}; A combination of 2BS-5344126kwm707 and 2BS-6229175kwm693 appeared to be predictive of Sm1 but there was variation between sources 11137. KASP marker developed in 11579. |
| c | Gene candidate with NB-ARC-LRR-kinase-MSP structure 11579. |
QTL
Henong 215 (R) / Yanyou (S) and
6218 (S) / Jimai 24 (R): selected RIL populations: Several QTL identified:
QSm.hbau-4A.2 with LOD scores 5.58 – 29.22 and PVE 24.4 – 44.8% were mapped to a 4.9 Mb interval; nearest markers
AX-109543456, AX-108942696 and
AX-110928325 11425.
Reeder I/Conan: RIL population:
QSm.mst-1A , flanked by
Xwmc59-1A and
Xbarc1022-1A was the most effective and constant QTL for reduced larval infection over two years (R[2] =0.17 and 0.34)
10841. RILs with this QTL in three genetic backgrounds had reduced infestations of 42%
10841.
3.27. Reaction to Schizaphis graminum Rond. ( Toxoptera graminum Rond.)⌂ Home
Insect pest: Greenbug
GB1
| Note | Recessive. |
| Synonym | gb1 222 |
| Chromosome | 1AS |
CI 9058
222; Dickinson Selection 28A
222. Located in the region 13.3 – 14.2 Mb
11731.
GB2
| Note | Derived from Secale cereale . 1A 554 = T |
| Chromosome | 1AL |
GB3
| Note | Resistance in Largo and derivatives was controlled by multiallelic complementary genes 783. Gb3 was postulated to be one of the loci concerned. |
| Chromosome | 7D |
| Chromosome | 7DL |
| Chromosome bin | 7DL3 0.82-1.00. |
| Varieties | Largo CI 17895 622; TAM110 0319; TAM112 {194, 10764}; TXGBE373 0319. |
| al | Insave rye. |
| Type varieties | Ae. tauschii PI268210 10907. |
| Marker associations | Completely associated with 2AFLP markers 0319. These were also present in germplasm line KS89WGRC4, implying the likely presence of Gb3 or a closely linked resistance gene 0319; Xgwm037-7D – 0.4 cM – Gb3/Xwmc634-7D – 0.8 cM – Xbarc76-7D 10169; H1067J6-R – 0.7 cM – Gb3 – 0.4 cM – H1009B3-F 10907. Gb3 – Gb8 15+-1.35 cM 11378. |
GB4
| Chromosome | 7DL |
| Varieties | CI 17959 903. Gb4 is either closely linked or allelic to Gb3 10267. |
GB6
| Note | Derived from Secale cereale . 1A = T |
| Chromosome | 1AL |
GB7
| Chromosome | 7DL |
| Varieties | Synthetic W7984 10169. |
| Type varieties | Ae. tauschii TA1651 10169. |
| Marker associations | Xwg420-7D – 2.1 cM – Gb7 – 13.4 cM – Xwmc671-7D 10169. KASP markers developed {M23026}; KASP markers developed 11633. |
GB8
| Synonym | Gb595379-1 11378. |
| Chromosome | 7DL |
| Chromosome bin | 7DL3-0.82-1.00. |
| Varieties | PI 595379-1 11378. |
| Marker associations | Xbarc11-7D – 10.41 cM – Gb8/Xstars508 (596.4 Mb) – 7.4 cM – Xwmc824-7D – 4.8 cM – Xgwm428-7D 11378. Gb3 – Gb8 15+-1.35 cM 11378. |
GB9
| Note | Gb76364 11726. |
| Chromosome | 7DL |
| Varieties | PI 703387, CWI 76364 11726. |
| dv | Ae. tauschii Wx1027 (CIMMYT) 11726. |
| Marker associations | Mapped to a 0.6 Mb interval - Stars-KASP872 (599.8 Mb; CS RefSeq 2.1) 0.6 cM – Gb9 – 0.5 cM and Stars-KASP881 (600.5 Mb) 11726. Gb9 – Gb3 , 14.9 cM 11726. Gb9 – Gb8 , 16.3 cM 11726. |
Temporary designations
| Chromosome | 7DL |
| Varieties | TA4152L94 = CETA/ Ae. tauschii Wx1027 10267. |
| Marker associations | Xwmc6717D – 34.3 cM – Gba – 20.7 cM – Xbarc53-7D 10267. |
| Chromosome | 7DL |
| Varieties | TA452L24 = CROC 1/ Ae. tauschii Wx224 10267. |
| Marker associations | Xwmc6717D – 5.4 cM – Gbb – 20.2 cM – Xbarc53-7D 10267. |
| Chromosome | 7DL |
| Varieties | TA4063.1 = 68111/Rugby//Ward// Ae. tauschii TA2477 10289. |
| Marker associations | Xgwm671-7D – 13.7 cM – Gbc – 17.9 cM – Xgdm150-7D 10267. |
| Varieties | TA4064.1 = Altar 84/ Ae. tauschii TA2841 10267. |
| Marker associations | Xgwm671-7D – 7.9 cM – Gbd – 1.9 cM – Xwmc157-7D 10267. |
| Synonym | Gbx 10267 |
| Chromosome | 7DL |
| Varieties | KS89WGRC4 = Wichita/TA1695//2*Wichita 10267. |
| dv | Ae. Tauschii TA1695 10267. |
| Marker associations | Xwmc157-7D – 2.7 cM – Xgdm150-7D 10267. |
| Synonym | Gbx 10267 |
| Varieties | W7984 10267. |
| Marker associations | Gbx2 was located 8.8 cM from Gb3 10267. |
| Chromosome | 7A |
| Varieties | Sando’s Selection 4040 10192. |
| Marker associations | Xpsr119-7A/Xbcd98-7A – 5.8 cM – Gby – 3.8 cM – Xpr1B-7° 10192. |
| Chromosome | 7DL |
| Varieties | KSU97-85-3 10171. |
| Type varieties | Ae. tauschii TA1675 10171. |
| Marker associations | Xgdm46-7DL – 9.5 cM – Xwmc157-7D/Gb3/Gbz – 5.1 cM – Xbarc53-7D 10171; Xwmc671-7D – 3.9 cM – Gbz/Xwmc157-7D – 5.1 cM – Xbarc53 10267. |
QTL
QGb.unlp.6A for antixenosis was associated with
Xgwm1009-6A and
Xgwm1185-6A in a CS/CS(Synthetic 6A) DH population
10216.
Antibiosis was associated with several markers, including
Rc3 (7DS) in chromosome 7D
10167.
3.28. Reaction to Soil-Borne Cereal Mosaic Virus⌂ Home
Syn.: Soilborne wheat mosaic. Vectored to the roots by the fungus, Polymyxa graminis
SBM1
| Synonym | SbmCz1 10132 |
| Chromosome | 5DL |
| Varieties | Cadenza 10132; Claire 11138; Moulin 11138; Tonic 10614; Tremie 11138. |
| Varieties (alt.) | Cadenza Sbm2 11500. |
| Marker associations | Xbarc110-5D – 14.7 cM – Sbm1 – 2.1 cM – Xwmc765-5D – 3.1 cM – Xbarc144-5D/Xwmc443-5D/RRES01-5D 10614; Caps marker RRESO1 was developed from an AFLP fragment10614; E37M49 – 9.0 cM – Sbm1 – 1.0 cM – Xgwm469-5D – 2.0 cM – Xwmc765-5D . Resistant varieties carried 152 or 154 bp alleles at Xgwm469-5D 11138; all susceptible genotypes had a null allele 11138. Sbm1 was identified in a DH population of Avalon (S)/Cadenza (R) 10132. |
SBM2
| Chromosome | 2BS |
| Varieties | Xi19 11500. |
| Varieties (alt.) | Cadenza Sbm1 11500. |
Temporary designations
| Chromosome | 5D |
| Varieties | TAM 107-R7 10683. |
| Varieties | Heyne 11435. 5D 11435. |
| Marker associations | Xgwm272-5D – 20.2 cM – Sbwm1 – 2.2 cM – wsnpCAP11c209198467 – 0.7 cM – wsnpJDc44385568170 – 8.7 cM – Xgwm469 11435. Sbm1 and Sbmwm1 are likely the same gene. |
| Chromosome | 5D |
| Varieties | KS96WGRC40 10685. |
| dv | Ae. tauschii TA2397 10685. |
| Marker associations | Xcfd010-5DL – 9.5 cM – SBWMV – 11.1 cM – Xbarc144-5D 10685. |
QSbv.ksu-5D , (R[2] =0.38) was found in Karl 92*2/TA4152-4
10273; the resistance was contributed by Karl 92.
3.29. Reaction to Tapesia yallundae . (Anomorph: Pseudocerosporella herpotrichoides (Fron) Deighton)⌂ Home
Disease: eyespot, strawbreaker footrot.
PCH1
PCH2
PCH3
Temporary designation
Pch Dv
618. 4VL
618.
| Chromosome bin | 5AL-6 0.68-0.78. |
| Marker associations | Closely associated with Xgwm639-5AL 10771. |
3.30. Reaction to Tilletia caries (D.C.)Tul., T. foetida (Wallr.) Liro, T.⌂ Home
controversa Disease: Bunt, dwarf smut, stinking smut.
BT1
| Synonym | M1 135 |
| Chromosome | 2B |
| Sources / synonyms | CS[*] 7/White Federation 38 1304. |
| Varieties | Albit 129; Banner Berkeley 129; Federation 41 137; Regal 129; Sherman 137; White Federation 38 1166; White Odessa 137. |
| Varieties (alt.) | Columbia Bt6 1005; Hussar Bt2 135; Hyslop Bt4 733; Martin Bt7 135; McDermid Bt4 734; Odessa Bt7 137; Tyee Bt4 22. |
BT2
| Synonym | H 129 |
| Varieties | Canus 137; Seln 1102 11693; Seln 2092 11693; Selection PS60-1-1075 551; Selection 1403 137. |
| Varieties (alt.) | Hussar Bt1 135. |
BT3
BT4
| Synonym | T 136 |
| Chromosome | 1B |
| Varieties | Bison 1285; CI15588 11693; Kaw 1285; Nebred 1285; Omaha 1285; Oveson 1235; Tres {heterogeneous} 23; Turkey 1558 137; Turkey 2578 137. |
| Varieties (alt.) | Hyslop Bt1 733; McDermid Bt1 734; Oro Bt7 137; Turkey 3055 Bt7 137; Tyee Bt1 22. Since Bt4 and Bt6 are very similar, as well as closely linked, only Turkey 3055 should be used as a definite source of Bt4 , and Rio should be used as the source of Bt6 |
BT5
| Chromosome | 1B |
| Varieties | Hohenheimer397; Selection R60-3432 551. |
BT6
| Synonym | R 1418 |
| Chromosome | 1B |
| Varieties | Rio 1418; Turkey 10095 & 10097 53. |
| Varieties (alt.) | Columbia Bt1 1005. Since Bt4 and Bt6 are very similar, as well as closely linked, only Turkey 3055 should be used as a definite source of Bt4 , and Rio should be used as the source of Bt6 . [T136]. |
BT7
| Synonym | M2 1275 |
| Chromosome | 2D |
| Sources / synonyms | CS[*] 7/Cheyenne 2D 1000. |
| Varieties | Baart 1275; Cheyenne 1000; Federation 1275; Gallipoli 1000; Onas 1275; Ranee 1000; Selection 1833 556; Seln500-77 11693. |
| Varieties (alt.) | CI 7090 Bt9 1000; Martin Bt1 137; Odessa Bt1 137; Oro Bt4 1000; Turkey 3055 Bt4 1000. |
BT8
BT9
| Chromosome | 6DL |
| Varieties | PI 166910 1006; PI 166921 1006; PI 167822 1006; PI 554099 11299; Selection M69-2073 551; M90387 11693. |
| Varieties (alt.) | CI 7090 Bt7 1000; Jeff Bt10 1436; PI 178383 Bt10 1006; Ranger Bt10 1438. |
Not clearly differentiated from
Bt11 11693.
BT10
| Synonym | QCbt.spa-6D {M11298} |
| Chromosome | 6DS |
| i | BW553 = Neepawa*6//Red Bobs/PI 178383 10475. |
| Varieties | AC2000 10181; AC Cadillac 10181; AC Carma 10181; AC Crystal 10181; AC Foremost 10181; AC Taber 10181; AC Vista 10181; Fairview 1183; M822102 11693; PI 116301 1004; PI 116306 1004; PI 554118 11299; Selection M69-2094 551. |
| Varieties (alt.) | Jeff Bt9 1436; PI 178383 Bt9 1000; Ranger Bt9 1438; Others {128, 239}. |
| Marker associations | Bt10 was completely linked with a 590 bp fragment produced by UBC primer 196 239; RAPD – 1.5 cM – Bt10 763; |
Bt10/FSDRSA
– 19.3 cM – Xgwm469-6D
– 1.8 cM – Xwmc749-6D
. The RAPD fragment was sequenced and converted to a diagnostic PCR marker for Bt10
in 0128. Present in lines with SrCad_
10733.
BT11
| Note | QBt.ifa-6DL 11693. 3B 11297; |
| Chromosome | 6DL |
| Varieties | M822123 = PI 554119 {10997, 11693}; Elgin/PI 166910 {10997, 11693}. |
| Marker associations | May be associated with Xbarc180 , Xwmc623 , Xwmc808 and Xgwm285 11297; Located between 492.6 and 495.2 Mbp, CS RefSeq 2.1 11693. Not clearly differentiated from Bt9 11693. |
BT12
| Synonym | QBt.ifa-7DS 11469 |
| Chromosome | 7DS |
| Varieties | PI 119333 10997. |
| Marker associations | Associated with 13 markers in a distally located physical region of ~4.3 Mbp 11469. Validated KASP markers were derived from IWB61302 and IWB50978 11469. Although appearing to be proximal to QDB.ui- 7DS |
11182 the genes were not clearly distinguished.
BT13
BT14
| Type varieties | Doubbi CI 13711 10997. |
BT15
| Type varieties | Carleton CI 12064 10997. |
Temporary desisgnation
| Varieties | PI 173437 10997. |
QTL
Blizard (R) / 8405-JC3C (S): DH population. Resistance and markers
Xgwm374-1BS, Xgwm364-1BS and
Xbarc128-1BS were within a 3.9 cM interval
10783.
Carberry / AC Cadillac: AC Cadillac contributed QTL
QCbt.spa-6D (
Bt10 ) on chromosome 6D (markers
XwPt-1695 ,
XwPt-672044 , and
XwPt-5114 ). Carberry contributed
QCbt.spa-1B
(
XwPt743523 ),
QCbt.spa-4B (
XwPt 744434 –
Xwmc617 ),
QCbt.spa-4D (
XwPt-9747 ),
QCbt.spa-5B
(
XtPt-3719 ), and
QCbt.spa-7D (
Xwmc273-7D )
11298.
Idaho 444 (R) / Rio Blanco S: RIL population: Three QTL for dwarf bunt resistance:
QDB.ui-7DS (R[2] = 0.3-0.6),
QDB.ui-1A (R[2] = 0.11-0.15) and
QDB.ui-2B (R[2] = 0.06). Two PCR-based markers were developed for the wPt-2565 sequence on chromosome 7DS
11182.
IDO835 (R) / Moreland (S): DH population:
Q.DB.ui-6DL (PVE 0.53,
Bt9 region) and
Q.DB.ui-7AL (PVE 0.38)
11400.
Trintella / Piko: DH population: One major gene in the chromosome 1BS centromere region, nearest marker
Xgwm273-1B 11003. Smaller QTL effects were detected on chromosomes 7A, 7B and 5B in different years. Additional QTL are listed in
18099.
KB1
| Varieties | Chris 394. |
| Varieties (alt.) | CMH77.308 Kb2 394. |
KB2
| Varieties | PF7 113 394. v CMH77. 308 Kb1 394; Shanghai #8 Kb4 394. |
KB3
KB4
| Varieties | Shanghai #8 Kb2 394. |
KB5
| Note | Recessive 394 |
| Varieties (alt.) | Pigeon Kb6 394. |
KB6
| Note | Recessive 394 |
| Varieties (alt.) | Pigeon Kb5 394. |
QTL NEED TO SPECIFY GERMPLASM BELOW
| Marker associations | Located in the interval XATPase-3B – Xcdo1164-3B . |
| Marker associations | Located in the interval Xmwg2112-5A – Xcdo20-5A . |
| Marker associations | Located in the interval Xabg391-5A – Xfba351-5A . |
WL711/HD29 (R): RILs: R[2] = 0.25, associated with
Xgwm538-4B 10498. WH542/W485 (R) RILs: R[2] = 0.15,
Xgwm6-4BL –
Xwmc349-4BL interval
10499.
WH542/HD29 (R): RILs: R[2] = 0.19,
Xgdm116-5BL –
Xwmc235-5BL 10499.
WH542/HD29 (R): RILs: R[2] = 0.13,
Xwmc105-6BS –
Xgwm88-6BS 10499.
3.32. Reaction to Ustilago tritici (Pers.) Rostrup⌂ Home
Disease: Loose smut.
UT1
UT2
UT3
UT4
UT5
| Synonym | Ut-Fore 10940, Ut-X 11164 |
| Chromosome | 5BL |
| Varieties | Foremost 10940. |
| Marker associations | Xgpw5029 – 2.8 cM – Ut5 – 1.3 cM – Xbarc232-5b 10940. See Ut-x . Race T10 was used for analysis 10940. |
UT6
| Synonym | QUt.spa-5B 11168 |
| Chromosome | 5BL |
| Varieties | AC Foremost 11169; AC Karma 10040; AC Vista 11168; Chinese Spring 11169; Glenlea 11169; HY320 11169; Oasis 11169. |
| Marker associations | Xgpw5029-5B – 2.8 cM – Ut6 – 2.8 cM – Xbarc232-5B 11169. |
UT7
| Synonym | QUt.spa.7A 11168 |
| Chromosome | 7A |
| Varieties | SC8021V2 11168. |
UT8
| Synonym | QUt.spa-3A 11168 |
| Chromosome | 3A |
| Varieties | 9340-SP 11168; Glenlea 11168. |
UT9
| Synonym | QUt.spa-6B 11168 |
| Chromosome | 6B |
| Varieties | SC8021V2 11168. |
UT10
| Synonym | QUt.sps-6D 11168 |
| Chromosome | 6D |
| Varieties | SC80-21V2 11168. |
UT11
| Chromosome | 7BS |
| Varieties | DH line TD14XDIA*B0075, CN 120264 11406; Sonop, TD-14 11406. |
| Marker associations | Co-segregation with BS0002256251, ExcabiburC3489182 and Kukrirepc71778644 at 0.43, 1.20 and 1.25 Mbp 11406. Ut11 conferred resistance to race T2 but not T9 and T39; resistance to those races (and race T2) was conferred by QUt.mrc-5B 11406. |
Temporary designations
| Chromosome | 5BS |
| Varieties | BW728 11729. |
| Marker associations | Mapped to a region close to Utd1 11729. Identified in a BW278 / AC Foremost cross with a Ustiago teitici isolate virelent to AC Foremost 11729. |
| Chromosome | 5BS |
| Type varieties | D93213 10684; P9163-BJ08*B 10684; VIR 51658 10684. |
| Marker associations | SCAR – 3.2 cM – Utd1 – 5.9 cM – Xgwm234-5B 10684. |
| Varieties | Biggar BSR 11164. |
| Marker associations | Xcrc4-2B – 14 cM – Ut-x – 10 cM – Xabc153-2B.2 11164; Xcrc4-2B.2 (Syn. Xcrc4.2 ) is a SCAR. |
Resistance to race 19 was associated with chromosome 6A of Cadet, Kota, Thatcher and TD18
0208. In the case of Cadet, resistance was localized to 6AS
0208.
3.33. Reaction to Wheat Spindle Streak Mosaic Bymovirus (WSSMV)⌂ Home
WSSMV is soil-borne and vectored by the fungus Polymxa graminis . This virus has some sequence similarity to Wheat Yellow Mosaic virus 10285. Wheat streak mosaic disease can also be caused by Triticum mosaic virus, which is also known as High Plains Wheat mosaic virus. Low rates of seed borne transmission of WSSMV are reported.
WSS1
| Note | Derived from Haynaldia villosa . T |
| Chromosome | 4VS |
| Chromosome | 4DL |
4D(4DL.4VS)
10271.
QTL
Geneva (R) / Augusta (S): 79% of the variation between these accessions was associated with markers
Xbcd1095-2D and
Xcdo373-2D located 12.4 cM apart in chromosome 2DL
0131.
3.34. Reaction to Mosaic Virus⌂ Home
Vectored by wheat curl mites, Eriophyes tulipae and E. tosichella . See: Resistance to colonization by Eriophyes tulipae . According to 10226 WSMV may also be see-borne. At least some sources of resistance to WSMV are also effective against Triticum mosaic virus.
WSM2
| Chromosome | 3BS |
| Varieties | Clara CL PI 1665948 11329; CO960293-2 10802; Oakley CL PI 670190 11329; RonL 10898; Snowmass 10802. |
| Marker associations | Wsm2 – 5.2 cM – XSTS3B55 10802; Xbarc102-3B – 1.6 cM – Wsm2 10802; Xgwm389-3B – 30.8 cM – Wsm2 – 45.2 cM – Xgwm566-3B 10898; Xbarc87-3B – 4.4 cM – Wsm2 – 3.9 cM – Xbarc102-3B 10982; Eight SNP markers were mapped within 1 cM of Wsm2 11329. KASP markers were developed from some of these SNP 11330; Mapped to a 4.0 Mb region in distal arm 3BS carrying 142 candidate genes, six of which were differentially expressed in Snowmass relative to susceptible Antero 11654. |
Wsm2 confers resistance at temperatures below 19C
10802. Allele
Xbarc102-3B 219 was the best predictor for
Wsm2 10982.
WSM3
3.35. Reaction to Xanthomonas campestris pv. undulosa⌂ Home
Disease: Bacterial leaf streak
BLS1
| Varieties (alt.) | Pavon Bls2 244; Mochis T88 Bls3 Bls4 244; Angostura F88 Bls5 244. |
| Varieties (alt.) | Pavon Bls1 244. |
| Varieties (alt.) | Mochis T88 Bls1 Bls 4 { 244}. |
| Varieties (alt.) | Mochis T88 Bls1 Bls3 244. |
| Varieties (alt.) | Turnco F88 244; Angostura F88 Bls1 244. |
bls1 bls2 bls3 bls4 bls5 : Alondra
244.
3.36. Resistance to Colonization by Eriophyes tulipae ( Aceria tulipae )Mite pest: Wheat⌂ Home
curl mite.
Eriophyes tulipae is the vector of wheat streak mosaic virus (WSMV) and the wheat spot mosaic agent (WSpM).
CMC1
| Chromosome | 6DS |
| i | Norsa*5/Cmc1 10166. |
| Varieties | Ae. squarrosa CI4/Novamichurinka (= AC PGR 16635) 1467; Norstar derivative 222. |
CMC2
| Note | Derived from Th. elongatum . 6A = T |
| Chromosome | 6AS |
CMC3
| Note | Derived from Secale cereale. 1A = |
| Chromosome | 1AL |
| Chromosome | 1RS |
| i | Norstar*5/Cmc3 10166. Need to confirm relationship of 1RS segment in Amigo and Salmon as this NIL was derived from KS80H4200 a Chinese Spring Salmon line 10166. |
| Varieties | Amigo; TAM107 222. |
| Varieties (alt.) | KS96GRC40 Cmc4 222. |
| Marker associations | Wheat lines with the 1RS segment and hence Cmc3 can be selected with the rye-specific SSR Xscm09-1R 222; |
CMC4
| Chromosome | 6DS |
| Varieties (alt.) | KS96WRC40 Cmc3 222. |
| Varieties | TAM112 11612; TAM115 11612; TAM204 11612. |
| dv | Ae. tauschii accession 222; Ae. tauschii TA1618 (11612}. |
| Marker associations | XksuG8-6D – 6.4 cM – Cmc4 – 4.1 cM – Xgdm141-6D 222. |
3.37. Reaction to Wheat Yellow Mosaic Virus⌂ Home
WYMV is soil-borne and vectored by the fungus Polymixa graminis . This virus has some sequence similarity to Wheat Spindle Streak Mosaic 10258, another bymovirus.
Temporary designations
| Chromosome | 2DL |
| Varieties | Ibis 10750; Jagger 10750; KS 831957 10750; Madsen 10750; Yumechikara 10750. |
| Marker associations | Xwmc181-2D – 12.4 cM – YmIb – 2.0 cM – Xcfd16-2D – 2.0 cM – Xwmc41-2D – 3.1 cM – Xcfd168-2D 10750. |
The relationship of
YmIb to a previously mapped gene in 2DL for resistance to WYMV and WSSMV in Yangfu 9311
10258 and a Geneva derivative
0131 was not established.
| Chromosome | 2DL |
| Varieties | Yangfu 931 10258. |
| Marker associations | Xpsp3039-2D/Xwmc181-2D – 0.7 cM – Xwmc41-3D – 8.1 cM – Xgwm349-2D 10258. |
| Note | Q.Ymym 11660. |
| Chromosome | 2DL |
| Chromosome bin | 2DL9-0.76-1.00. |
| Varieties | Fielder 11645; Yining Xiaomai 11186. |
| Marker associations | Xwmc41-2D – 3.7 cM – 2SNP86.2 – 0.4 cM – QYm.nau-2D – 1.0 cM – 2EST784 11186. |
According to
11645 QYm.nau-2D is a natural alien translocation from an
Aegilops species and several subsequent wheat haplotypes arose from rare recombination events. This QTL is present in a wide range of cultivars from Europe, USA, Japan, and China
11645.